Pregenerated sensors for OLFR533 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056883Ensembl transcript IDs: ENSMUST00000071755.5, ENSMUST00000211093.3, ENSMUST00000215308.2, ENSMUST00000216258.2, ENSMUST00000217179.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCAAATTATTTGATAAACCAAGCAACAGGAAAAACAATGAGATaGAAATGCTCAAGTCAGGCCAGAAACATGTCCAGAACAAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: PSNYLINQATGKTMR*KCSSQARNMSRTRV Trigger: CACTCTTGTTCTGGACATGTTTCTGGCCTGACTTGAGCATTTTCATCTCATTGTTTTTCCTGTTGCTTGGTTTATCAAATAATTTGAGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR GCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGACAACCCACCCACTCCTaGTTCCTGGCCCCGGCATTC | + |
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Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGQPTHS*FLAPAF Trigger: GAATGCCGGGGCCAGGAAGCAGGAGTGGGTGGGTTG...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGACCCACTCCTGCTTCCTaGCCCCGGCATTCGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGPTPAS*PRHSPI Trigger: TATAGGCGAATGCCGGGGCCAGGAAGCAGGAGTGGG...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATACAACCCACCCACTCCTaGTTCCTGGCCCCGGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: EATRPMSDSDLTIMNVGIQPTHS*FLAPAF Trigger: GAATGCCGGGGCCAGGAAGCAGGAGTGGGTGGGTTG...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATACCCACTCCTGCTTCCTaGCCCCGGCATTCGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: EATRPMSDSDLTIMNVGIPTPAS*PRHSPI Trigger: TATAGGCGAATGCCGGGGCCAGGAAGCAGGAGTGGG...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR GCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGATTGATAGGGATCAGATaGCCCCAGAAACATCCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGLIGIR*PQKHPL Trigger: TAGGGGATGTTTCTGGGGGCATCTGATCCCTATCAA...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR TCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAGGAAAAACAATGAGATaGAAATGCTCAAGTCAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGGKTMR*KCSSQA Trigger: GGCCTGACTTGAGCATTTTCATCTCATTGTTTTTCC...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATATTGATAGGGATCAGATaGCCCCAGAAACATCCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: EATRPMSDSDLTIMNVGILIGIR*PQKHPL Trigger: TAGGGGATGTTTCTGGGGGCATCTGATCCCTATCAA...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAACCTTTAAAATGACATaGGGTCTGAGAAGAAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGTFKMT*GLRRSH Trigger: GTGGCTTCTTCTCAGACCCCATGTCATTTTAAAGGT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR CAA 90 bp | TCTGATTCTGATCTGACAATTATGAATGTTGGGATAAGAGACATTTaGATAGGGATCAGATGCCCCCAGAAACATCCCCTAACACATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SDSDLTIMNVGIRDI*IGIRCPQKHPLTHV Trigger: AACATGTGTTAGGGGATGTTTCTGGGGGCATCTGATCCCTATCAAAATGTCTCTTATCCCAACATTCATAATTGTCAGATCAGAATCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAGGAAAAACAATGAGATaGAAATGCTCAAGTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EATRPMSDSDLTIMNVGIGKTMR*KCSSQA Trigger: GGCCTGACTTGAGCATTTTCATCTCATTGTTTTTCC...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAAGACACTACAAACTTTaGAGAATTAAGCCAGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGRHYKL*RIKPGY Trigger: ATAGCCTGGCTTAATTCTCCAAAGTTTGTAGTGTCT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGATTAACCATTTACTTGTaGCCAAAGACACAGAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGLTIYL*PKTQKI Trigger: GATCTTCTGTGTCTTTGGCCACAAGTAAATGGTTAA...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAAGACACTACAAACTTTaGAGAATTAAGCCAGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: EATRPMSDSDLTIMNVGIRHYKL*RIKPGY Trigger: ATAGCCTGGCTTAATTCTCCAAAGTTTGTAGTGTCT...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CAA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGATCTTTAACCATTTACTaGTGGCCAAAGACACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGSLTIY*WPKTQK Trigger: CTTCTGTGTCTTTGGCCACAAGTAAATGGTTAAAGA...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CAA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGACTTCCCTCAAATTATTaGATAAACCAAGCAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGLPSNY*INQATG Trigger: TCCTGTTGCTTGGTTTATCAAATAATTTGAGGGAAG...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR TCA 72 bp | TCATGCCACACAAAACTCATCCAGGCAGGAGAACGATaGGGAAAAATTAGACTCATGAATTTGCAAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SCHTKLIQAGER*GKIRLMNLQTF Trigger: AAAGGTTTGCAAATTCATGAGTCTAATTTTTCCTCATCGTTCTCCTGCCTGGATGAGTTTTGTGTGGCATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATATCTTTAACCATTTACTaGTGGCCAAAGACACAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EATRPMSDSDLTIMNVGISLTIY*WPKTQK Trigger: CTTCTGTGTCTTTGGCCACAAGTAAATGGTTAAAGA...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATACTTCCCTCAAATTATTaGATAAACCAAGCAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: EATRPMSDSDLTIMNVGILPSNY*INQATG Trigger: TCCTGTTGCTTGGTTTATCAAATAATTTGAGGGAAG...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| 3UTR TCA 72 bp | TATTTGATAAACCAAGCAACAGGAAAAACAATGAGATaGAAATGCTCAAGTCAGGCCAGAAACATGTCCAGA | + |
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Preference number: 3 (lower is better) Translates to: YLINQATGKTMR*KCSSQARNMSR Trigger: TCTGGACATGTTTCTGGCCTGACTTGAGCATTTTCATCTCATTGTTTTTCCTGTTGCTTGGTTTATCAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGACTTCTTGCCCTCAGCTaGGCGGATGCGCAGGATGCT | + |
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Preference number: 4 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGLLALS*ADAQDA Trigger: AGCATCCTGCGCATCCGCTCAGCTGAGGGCAAGAAG...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGACAGAAGAGAACATCCTaGACCCTGGGGTCATCAACA | + |
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Preference number: 4 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGQKRTS*TLGSST Trigger: TGTTGATGACCCCAGGGTCCAGGATGTTCTCTTCTG...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAAGACGAACATCTGTGTaGGGCATCCCCCATAAGATA | + |
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Preference number: 4 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGRRTSV*GIPHKI Trigger: TATCTTATGGGGGATGCCTCACACAGATGTTCGTCT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR GCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAATTGCCAGCTATGGCTaGCACGAACAAGGCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGIASYG*HEQGKE Trigger: TTCTTTGCCTTGTTCGTGGCAGCCATAGCTGGCAAT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGATATACAGAACAGCAATaGGTTTGTCCAGGAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGYTEQQ*VCPGTQ Trigger: CTGGGTTCCTGGACAAACTCATTGCTGTTCTGTATA...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATACAGAAGAGAACATCCTaGACCCTGGGGTCATCAACA | + |
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Preference number: 4 (lower is better) Translates to: EATRPMSDSDLTIMNVGIQKRTS*TLGSST Trigger: TGTTGATGACCCCAGGGTCCAGGATGTTCTCTTCTG...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAAGACGAACATCTGTGTaGGGCATCCCCCATAAGATA | + |
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Preference number: 4 (lower is better) Translates to: EATRPMSDSDLTIMNVGIRRTSV*GIPHKI Trigger: TATCTTATGGGGGATGCCTCACACAGATGTTCGTCT...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAACAAGTGAGCACCAATaGATTGAAAGCTCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGTSEHQ*IESSSE Trigger: TTCACTGGAGCTTTCAATTCATTGGTGCTCACTTGT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR GCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAATTGCCAGCTATGGCTaGCACGAACAAGGCAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: EATRPMSDSDLTIMNVGIIASYG*HEQGKE Trigger: TTCTTTGCCTTGTTCGTGGCAGCCATAGCTGGCAAT...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATATATACAGAACAGCAATaGGTTTGTCCAGGAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: EATRPMSDSDLTIMNVGIYTEQQ*VCPGTQ Trigger: CTGGGTTCCTGGACAAACTCATTGCTGTTCTGTATA...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAACAAGTGAGCACCAATaGATTGAAAGCTCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: EATRPMSDSDLTIMNVGITSEHQ*IESSSE Trigger: TTCACTGGAGCTTTCAATTCATTGGTGCTCACTTGT...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS TCA 90 bp | AGTACATGGGAGTGTGGAGGTTGGGACTGCTGTGAATGGTCGCGATaGTCAGGCCATTGCCAGCTATGGCTGCCACGAACAAGGCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: STWECGGWDCCEWSR*SGHCQLWLPRTRQR Trigger: TCTTTGCCTTGTTCGTGGCAGCCATAGCTGGCAATGGCCTGATCATCGCGACCATTCACAGCAGTCCCAACCTCCACACTCCCATGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071755.5 ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAGCGATGATCAGGCCATaGCCAGCTATGGCTGCCACG | + |
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Preference number: 5 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGAMIRP*PAMAAT Trigger: CGTGGCAGCCATAGCTGGCAATGGCCTGATCATCGC...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAGCGATGATCAGGCCATaGCCAGCTATGGCTGCCACG | + |
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Preference number: 5 (lower is better) Translates to: EATRPMSDSDLTIMNVGIAMIRP*PAMAAT Trigger: CGTGGCAGCCATAGCTGGCAATGGCCTGATCATCGC...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAGTGAGCACCAATGAATaGAAAGCTCCAGTGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGVSTNE*KAPVNH Trigger: GTGGTTCACTGGAGCTTTCAATTCATTGGTGCTCAC...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAGTGAGCACCAATGAATaGAAAGCTCCAGTGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: EATRPMSDSDLTIMNVGIVSTNE*KAPVNH Trigger: GTGGTTCACTGGAGCTTTCAATTCATTGGTGCTCAC...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAACAGTCATGATGTCATaGATAAAGGTGGGACTACAG | + |
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Preference number: 5 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGTVMMS*IKVGLQ Trigger: CTGTAGTCCCACCTTTATCAATGACATCATGACTGT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | ATAATAGTAAACCTTGAAGGATGGTCATGCCACACAAAACTCATCCAGGCAGGAAGCCATAGGATGTCATaGTCAATAAAAAGTTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: IIVNLEGWSCHTKLIQAGSHRMS*SIKSSG Trigger: GCCTGAACTTTTTATTGACAATGACATCCTATGGCT...TCCTGCCTGGATGAGTTTTGTGTGGCATGACCATCCTTCAAGGTTTACTATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS-3UTR CAA 90 bp | GAAGCCACTAGACCAATGTCTGATTCTGATCTGACAATTATGAATGTTGGGATAAGCCATAGGATGTCATaGTCAATAAAAAGTTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: EATRPMSDSDLTIMNVGISHRMS*SIKSSG Trigger: GCCTGAACTTTTTATTGACAATGACATCCTATGGCT...TATCCCAACATTCATAATTGTCAGATCAGAATCAGACATTGGTCTAGTGGCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS TCA 72 bp | GAGTGTGGAGGTTGGGACTGCTGTGAATGGTCGCGATaGTCAGGCCATTGCCAGCTATGGCTGCCACGAACA | + |
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Preference number: 6 (lower is better) Translates to: ECGGWDCCEWSR*SGHCQLWLPRT Trigger: TGTTCGTGGCAGCCATAGCTGGCAATGGCCTGATCATCGCGACCATTCACAGCAGTCCCAACCTCCACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071755.5 ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS TCA 72 bp | CAAAGGTTGCAAGGGCCACACAGACCCTGCCACTCATaGGGGTGCCATAGTGCAGTGGCCGACAGATTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QRLQGPHRPCHS*GCHSAVADRLQ Trigger: TTGCAATCTGTCGGCCACTGCACTATGGCACCCTCATGAGTGGCAGGGTCTGTGTGGCCCTTGCAACCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071755.5 ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS TCA 72 bp | CAGAGCCCAGGACCCAGGAGAAGACGAACATCTGTGTaGGGCATCCCCCATAAGATATGCTGTTCTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: QSPGPRRRRTSV*GIPHKICCSLP Trigger: TGGCAGAGAACAGCATATCTTATGGGGGATGCCTCACACAGATGTTCGTCTTCTCCTGGGTCCTGGGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000071755.5 ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS TCA 72 bp | TCAGAGATGGGGTCACAGTGGTATACAGAACAGCAATaGGTTTGTCCAGGAACCCAGCAGTTCCTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SEMGSQWYTEQQ*VCPGTQQFLGL Trigger: CAGCCCTAGGAACTGCTGGGTTCCTGGACAAACTCATTGCTGTTCTGTATACCACTGTGACCCCATCTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071755.5 ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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| CDS TCA 72 bp | GAAAGACAATGGCAACATCAGACAAGTGAGCACCAATaGATTGAAAGCTCCAGTGAACCACACAAAGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: ERQWQHQTSEHQ*IESSSEPHKGC Trigger: GCAACCTTTGTGTGGTTCACTGGAGCTTTCAATTCATTGGTGCTCACTTGTCTGATGTTGCCATTGTCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000071755.5 ENSMUST00000211093.3 ENSMUST00000215308.2 ENSMUST00000216258.2 ENSMUST00000217179.2 |
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