Pregenerated sensors for OLFR531 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062712Ensembl transcript IDs: ENSMUST00000080153.4, ENSMUST00000216053.2, ENSMUST00000217167.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGAAACAACATaGTCCCAAGCAAGCAGCAGCCCTGCTGCATTACTTCATGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: VPCHSSSLATSLETT*SQASSSPAALLHGG Trigger: CCCACCATGAAGTAATGCAGCAGGGCTGCTGCTTGCTTGGGACCATGTTGTTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 90 bp | ACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTaGAAACAACATGGTCCCAAGCAAGCAGCAGCCCTGCTGCATTAC | + |
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Preference number: 1 (lower is better) Translates to: TAAVFPVTVPLWPHP*KQHGPKQAAALLHY Trigger: GTAATGCAGCAGGGCTGCTGCTTGCTTGGGACCATGTTGTTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 90 bp | GCACCGAGAAATCGAACATCTAGCAAACTTCTGCTGACACCCTCCTaGGTGAGAGCCAGTTATGCCAGGGAAGCTGCTGATTGGCATTGT | + |
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Preference number: 1 (lower is better) Translates to: APRNRTSSKLLLTPS*VRASYAREAADWHC Trigger: ACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGCTCTCACCCAGGAGGGTGTCAGCAGAAGTTTGCTAGATGTTCGATTTCTCGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 90 bp | CCAGGGCTTCTCTGTGAAGTGCAGCAGTCCAACAGTTGTCCCTTATaGTTGAACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTA | + |
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Preference number: 1 (lower is better) Translates to: PGLLCEVQQSNSCPL*LNWVCPQKKEQRPL Trigger: TAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGTTCAACCATAAGGGACAACTGTTGGACTGCTGCACTTCACAGAGAAGCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 90 bp | ACACCCTCCTGGGTGAGAGCCAGTTATGCCAGGGAAGCTGCTGATTaGCATTGTTCATTCAGAGTGGACAGAACAGAACATAAGGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TPSWVRASYAREAAD*HCSFRVDRTEHKAK Trigger: CTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGCTCTCACCCAGGAGGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 90 bp | CTCTGTGAAGTGCAGCAGTCCAACAGTTGTCCCTTATGGTTGAACTaGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCAAACCTG | + |
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Preference number: 1 (lower is better) Translates to: LCEVQQSNSCPLWLN*VCPQKKEQRPLPNL Trigger: CAGGTTTGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGTTCAACCATAAGGGACAACTGTTGGACTGCTGCACTTCACAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR GCA 90 bp | ACAGAACAGAACATAAGGCAAAGGCAGGTCTTATTTCATCACACATaGTCACAGCATGGCAAGGGCCTGCACCAGAAATCTCTTTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: TEQNIRQRQVLFHHT*SQHGKGLHQKSLSK Trigger: CTTTGAAAGAGATTTCTGGTGCAGGCCCTTGCCATGCTGTGAGCATGTGTGATGAAATAAGACCTGCCTTTGCCTTATGTTCTGTTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 90 bp | CCAGTTATGCCAGGGAAGCTGCTGATTGGCATTGTTCATTCAGAGTaGACAGAACAGAACATAAGGCAAAGGCAGGTCTTATTTCATCAC | + |
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Preference number: 1 (lower is better) Translates to: PVMPGKLLIGIVHSE*TEQNIRQRQVLFHH Trigger: GTGATGAAATAAGACCTGCCTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGCCAGTCCAGCAGGGCTaGAGGCAGTGGTGCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RGTAAVFPVTVPLWPHPWPVQQG*RQWCWH Trigger: GTGCCAGCACCACTGCCTTCAGCCCTGCTGGACTGG...CCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGTTATGCCAGGGAAGCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGACCAGTCCAGCAGGGCTaGAGGCAGTGGTGCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: ASYAREAADWHCSFRVDRPVQQG*RQWCWH Trigger: GTGCCAGCACCACTGCCTTCAGCCCTGCTGGACTGG...TCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | CGAGGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGGTTGTCCCTTATGGTTaGACTGGGTGTGTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RGTAAVFPVTVPLWPHPWVVPYG*TGCVLR Trigger: TCTGAGGACACACCCAGTTCAACCATAAGGGACAAC...CCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR GCA 90 bp | CGAGGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGAAGCAGCAGCCCTGCTaGATTACTTCATGGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: RGTAAVFPVTVPLWPHPWKQQPC*ITSWWE Trigger: TTCCCACCATGAAGTAATGCAGCAGGGCTGCTGCTT...CCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACATCCCCACCAGTCCAGCAGGGCTaGAGGCAGTGGTGCTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: YLEGRTIVLKPPDLFTSPPVQQG*RQWCWH Trigger: GTGCCAGCACCACTGCCTTCAGCCCTGCTGGACTGG...TGGGGATGTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | GGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGAAACGCCACATCCACATTTaGTGTTTCCTGGGAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: GTAAVFPVTVPLWPHPWKRHIHI*CFLGIC Trigger: GCAAATTCCCAGGAAACATCAAATGTGGATGTGGCG...TTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGAAGAGAGGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTTGCCAGGGAAGCTGCTaGTTGGCATTGTTCATTCAG | + |
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Preference number: 2 (lower is better) Translates to: KRKRGHQSLAYGPERAQPCQGSC*LALFIQ Trigger: CTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCA...AGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCCTCTCTTCCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | CATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGGATGGGGCATAGGTGGGAATTTGCTACATaGTCCCAGGGCTTCTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HMDLREPSLEVRIWMGHRWEFAT*SQGFSV Trigger: CACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCA...CCTATGCCCCATCCAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTGGGAATTTGCTACATaGTCCCAGGGCTTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: GHQSLAYGPERAQPRSEDWEFAT*SQGFSV Trigger: CACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCA...ATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGAAGAGAGGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTCTCTGGCCACATCCTTaGAAACAACATGGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KRKRGHQSLAYGPERAQPLWPHP*KQHGPK Trigger: CTTGGGACCATGTTGTTTCCAAGGATGTGGCCAGAG...AGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCCTCTCTTCCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGAAGAGAGGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTTGTTTCCTGGGAATTTaGTACATGGTCCCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: KRKRGHQSLAYGPERAQPCFLGI*YMVPGL Trigger: AAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACA...AGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCCTCTCTTCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGAAAAACAGTTGTCCCTTATaGTTGAACTGGGTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GTAAVFPVTVPLWPHPWKNSCPL*LNWVCP Trigger: AGGACACACCCAGTTCAACCATAAGGGACAACTGTT...TTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGACATTTGATGTTTCCTaGGAATTTGCTACATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: RGTAAVFPVTVPLWPHPWTFDVS*EFATWS Trigger: GGACCATGTAGCAAATTCCCAGGAAACATCAAATGT...CCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCCTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGAAGAGAGGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTGTCACAGTTCCTCTCTaGCCACATCCTTGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: KRKRGHQSLAYGPERAQPVTVPL*PHPWKQ Trigger: TTGTTTCCAAGGATGTGGCCAGAGAGGAACTGTGAC...AGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCCTCTCTTCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CAA 90 bp | GGGCTTCTCTGTGAAGTGCAGCAGTCCAACAGTTGTCCCTTATGGTaGAACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCA | + |
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Preference number: 2 (lower is better) Translates to: GLLCEVQQSNSCPLW*NWVCPQKKEQRPLP Trigger: TGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGTTCAACCATAAGGGACAACTGTTGGACTGCTGCACTTCACAGAGAAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGGTTGTCCCTTATGGTTaGACTGGGTGTGTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: HQSLAYGPERAQPRSEDLVVPYG*TGCVLR Trigger: TCTGAGGACACACCCAGTTCAACCATAAGGGACAAC...CAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATAGGGAAGCTGCTGATTaGCATTGTTCATTCAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: GHQSLAYGPERAQPRSEDREAAD*HCSFRV Trigger: CACTCTGAATGAACAATGCCAATCAGCAGCTTCCCT...ATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGCTCTGGCCACATCCTTaGAAACAACATGGTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: HQSLAYGPERAQPRSEDLLWPHP*KQHGPK Trigger: CTTGGGACCATGTTGTTTCCAAGGATGTGGCCAGAG...CAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | GATGTTTCCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCAACAGTTGTCCCTTATaGTTGAACTGGGTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DVSWEFATWSQGFSVKCSNSCPL*LNWVCP Trigger: AGGACACACCCAGTTCAACCATAAGGGACAACTGTT...GCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATATTGTTCATTCAGAGTaGACAGAACAGAACATAAGG | + |
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Preference number: 2 (lower is better) Translates to: GHQSLAYGPERAQPRSEDIVHSE*TEQNIR Trigger: CCTTATGTTCTGTTCTGTCCACTCTGAATGAACAAT...ATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | CATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGGATGGGGCATAGGATTGTTCATTCAGAGTaGACAGAACAGAACATAAGG | + |
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Preference number: 2 (lower is better) Translates to: HMDLREPSLEVRIWMGHRIVHSE*TEQNIR Trigger: CCTTATGTTCTGTTCTGTCCACTCTGAATGAACAAT...CCTATGCCCCATCCAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCCTGCACCAGAAATCTCTTTCAAAGCTACTAAAAAGGGGAAGGAATCATTGTTTCCTGGGAATTTaGTACATGGTCCCAGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: KGLHQKSLSKLLKRGRNHCFLGI*YMVPGL Trigger: AAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACA...ATGATTCCTTCCCCTTTTTAGTAGCTTTGAAAGAGATTTCTGGTGCAGGCCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGATTGTTCATTCAGAGTaGACAGAACAGAACATAAGG | + |
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Preference number: 2 (lower is better) Translates to: HQSLAYGPERAQPRSEDLIVHSE*TEQNIR Trigger: CCTTATGTTCTGTTCTGTCCACTCTGAATGAACAAT...CAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR TCA 90 bp | GATATTTTACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACCGCCACATCCACATTTaGTGTTTCCTGGGAATTTGC | + |
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Preference number: 2 (lower is better) Translates to: DILLRRQNNCPKTSRPLYRHIHI*CFLGIC Trigger: GCAAATTCCCAGGAAACATCAAATGTGGATGTGGCG...GTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTAAAATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | TACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACATCCCCAACATTTGATGTTTCCTaGGAATTTGCTACATGGTCC | + |
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Preference number: 2 (lower is better) Translates to: YLEGRTIVLKPPDLFTSPTFDVS*EFATWS Trigger: GGACCATGTAGCAAATTCCCAGGAAACATCAAATGT...TGGGGATGTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR-3UTR CCA 90 bp | GATATTTTACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACAACAGTTGTCCCTTATaGTTGAACTGGGTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DILLRRQNNCPKTSRPLYNSCPL*LNWVCP Trigger: AGGACACACCCAGTTCAACCATAAGGGACAACTGTT...GTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTAAAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 72 bp | GTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTaGAAACAACATGGTCCCAAGCAAGCAGCAGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: VFPVTVPLWPHP*KQHGPKQAAAL Trigger: CAGGGCTGCTGCTTGCTTGGGACCATGTTGTTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR TCA 72 bp | CCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTaGAGTGCAGCAGTCCAACAGTTGTCCCTTATGGTT | + |
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Preference number: 3 (lower is better) Translates to: PGNLLHGPRASL*SAAVQQLSLMV Trigger: AACCATAAGGGACAACTGTTGGACTGCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR TCA 72 bp | CTCCTGGGTGAGAGCCAGTTATGCCAGGGAAGCTGCTaGTTGGCATTGTTCATTCAGAGTGGACAGAACAGA | + |
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Preference number: 3 (lower is better) Translates to: LLGESQLCQGSC*LALFIQSGQNR Trigger: TCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGCTCTCACCCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 72 bp | AATCGAACATCTAGCAAACTTCTGCTGACACCCTCCTaGGTGAGAGCCAGTTATGCCAGGGAAGCTGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: NRTSSKLLLTPS*VRASYAREAAD Trigger: ATCAGCAGCTTCCCTGGCATAACTGGCTCTCACCCAGGAGGGTGTCAGCAGAAGTTTGCTAGATGTTCGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR TCA 72 bp | GTGAAGTGCAGCAGTCCAACAGTTGTCCCTTATGGTTaGACTGGGTGTGTCCTCAGAAAAAGGAACAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: VKCSSPTVVPYG*TGCVLRKRNRD Trigger: GTCTCTGTTCCTTTTTCTGAGGACACACCCAGTTCAACCATAAGGGACAACTGTTGGACTGCTGCACTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR TCA 72 bp | AACCAGACAGGGATAGGAATACGCCACATCCACATTTaGTGTTTCCTGGGAATTTGCTACATGGTCCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: NQTGIGIRHIHI*CFLGICYMVPG Trigger: CCCTGGGACCATGTAGCAAATTCCCAGGAAACATCAAATGTGGATGTGGCGTATTCCTATCCCTGTCTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 72 bp | ACATCCACATTTGATGTTTCCTGGGAATTTGCTACATaGTCCCAGGGCTTCTCTGTGAAGTGCAGCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: TSTFDVSWEFAT*SQGFSVKCSSP Trigger: TGGACTGCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATCAAATGTGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR CCA 72 bp | TGGGTGAGAGCCAGTTATGCCAGGGAAGCTGCTGATTaGCATTGTTCATTCAGAGTGGACAGAACAGAACAT | + |
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Preference number: 3 (lower is better) Translates to: WVRASYAREAAD*HCSFRVDRTEH Trigger: ATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGCTCTCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| 3UTR GCA 72 bp | AACATAAGGCAAAGGCAGGTCTTATTTCATCACACATaGTCACAGCATGGCAAGGGCCTGCACCAGAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: NIRQRQVLFHHT*SQHGKGLHQKS Trigger: AGATTTCTGGTGCAGGCCCTTGCCATGCTGTGAGCATGTGTGATGAAATAAGACCTGCCTTTGCCTTATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| 3UTR CCA 72 bp | CCAGGGAAGCTGCTGATTGGCATTGTTCATTCAGAGTaGACAGAACAGAACATAAGGCAAAGGCAGGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PGKLLIGIVHSE*TEQNIRQRQVL Trigger: TAAGACCTGCCTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| 3UTR TCA 72 bp | CACGAAGTTGAAGATAGCATAGAAAGGGCGAAGGGATaGGGCAGATTGATAGAAACATTACACACAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: HEVEDSIERAKG*GRLIETLHTDM Trigger: CATGTCTGTGTGTAATGTTTCTATCAATCTGCCTCATCCCTTCGCCCTTTCTATGCTATCTTCAACTTCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGGCTTGGGTAGGATGGTaGAGGTGCAAAGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGTAAVFPVTVPLWPHPWAWVGW*RCKGCP Trigger: TGGACATCCTTTGCACCTCCACCATCCTACCCAAGC...CCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | CATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGGATGGGGCATAGGGGTGTGCAGAGCAGGTaGAGAAGGCTCGTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HMDLREPSLEVRIWMGHRGVQSR*RRLVAC Trigger: GCAAGCAACGAGCCTTCTCCACCTGCTCTGCACACC...CCTATGCCCCATCCAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | GGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATAGAAGGCTCGTTGCTTaGCCTCAGCTGAGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: GHQSLAYGPERAQPRSEDRRLVA*PQLSGS Trigger: AGATCCGCTCAGCTGAGGGCAAGCAACGAGCCTTCT...ATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | GATGTTTCCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCGGTGTGCAGAGCAGGTaGAGAAGGCTCGTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DVSWEFATWSQGFSVKCSGVQSR*RRLVAC Trigger: GCAAGCAACGAGCCTTCTCCACCTGCTCTGCACACC...GCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| 3UTR CAA 72 bp | TGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTaGGAAACAACATGGTCCCAAGCAAGCAGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CVPCHSSSLATS*ETTWSQASSSP Trigger: AGGGCTGCTGCTTGCTTGGGACCATGTTGTTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | CATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGGATGGGGCATAGGAAGCTCCACCCCCAGTaGCCATGTGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HMDLREPSLEVRIWMGHRKLHPQ*PCEEEE Trigger: CTCTTCTTCTTCACATGGTCACTGGGGGTGGAGCTT...CCTATGCCCCATCCAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | CATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGGATGGGGCATAGGTCCTCAGAGTGTAGATaGGAGGGTTCAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HMDLREPSLEVRIWMGHRSSECR*EGSRWV Trigger: CACCCACCTTGAACCCTCTCATCTACACTCTGAGGA...CCTATGCCCCATCCAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCAGTCCAACAGTTGTCCCTTATGGGTAGGATGGTGGAGGTaGAAAGGATGTCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MVPGLLCEVQQSNSCPLWVGWWR*KGCPPQ Trigger: CTGTGGTGGACATCCTTTGCACCTCCACCATCCTAC...CCATAAGGGACAACTGTTGGACTGCTGCACTTCACAGAGAAGCCCTGGGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | GGCCACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATGCTTGGGTAGGATGGTaGAGGTGCAAAGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHQSLAYGPERAQPRSEDAWVGW*RCKGCP Trigger: TGGACATCCTTTGCACCTCCACCATCCTACCCAAGC...ATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | GATGTTTCCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCAAGCTCCACCCCCAGTaGCCATGTGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVSWEFATWSQGFSVKCSKLHPQ*PCEEEE Trigger: CTCTTCTTCTTCACATGGTCACTGGGGGTGGAGCTT...GCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | GATGTTTCCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCCCACTGAGGTGTAGATaGTGGACACCACCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DVSWEFATWSQGFSVKCSPLRCR*WTPPCP Trigger: AGGACAAGGTGGTGTCCATCATCTACACCTCAGTGG...GCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | GATGTTTCCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCAATGCCAGCCAGAAATaGACACACTCTGGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DVSWEFATWSQGFSVKCSNASQK*THSGAH Trigger: ATGGGCCCCAGAGTGTGTGCATTTCTGGCTGGCATT...GCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGAGTTTAGCATATGGACCTGAGAGAGCCCAGCCTAGAAGTGAGGATTTGAGAAGGCTCGTTGCTTaGCCTCAGCTGAGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HQSLAYGPERAQPRSEDLRRLVA*PQLSGS Trigger: AGATCCGCTCAGCTGAGGGCAAGCAACGAGCCTTCT...CAAATCCTCACTTCTAGGCTGGGCTCTCTCAGGTCCATATGCTAAACTCTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | CGAGGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGCTCGTTCAATTGTGTTaGAGCACAAGAGAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGTAAVFPVTVPLWPHPWLVQLC*STRELQ Trigger: TTGAAGCTCTCTTGTGCTCCAACACAATTGAACGAG...CCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGTTATGCCAGGGAAGCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAAAGCTCCACCCCCAGTaGCCATGTGAAGAAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASYAREAADWHCSFRVDRKLHPQ*PCEEEE Trigger: CTCTTCTTCTTCACATGGTCACTGGGGGTGGAGCTT...TCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCAAACCTGTGATCCCCCACTGAGGTGTAGATaGTGGACACCACCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGCVLRKRNRDLYQTCDPPLRCR*WTPPCP Trigger: AGGACAAGGTGGTGTCCATCATCTACACCTCAGTGG...GGGATCACAGGTTTGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCAAACCTGTGATCCCTCCTCAGAGTGTAGATaGGAGGGTTCAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGCVLRKRNRDLYQTCDPSSECR*EGSRWV Trigger: CACCCACCTTGAACCCTCTCATCTACACTCTGAGGA...GGGATCACAGGTTTGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCAAACCTGTGATCCCGCTTGGGTAGGATGGTaGAGGTGCAAAGGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGCVLRKRNRDLYQTCDPAWVGW*RCKGCP Trigger: TGGACATCCTTTGCACCTCCACCATCCTACCCAAGC...GGGATCACAGGTTTGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCAGTCCAACAGTTGTCCCTTATGGTGTTCAGTGAGTAGCTaGATGAAGGGCGAATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVPGLLCEVQQSNSCPLWCSVSS*MKGECR Trigger: CCTACATTCGCCCTTCATCCAGCTACTCACTGAACA...CCATAAGGGACAACTGTTGGACTGCTGCACTTCACAGAGAAGCCCTGGGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGGGTGTGCAGAGCAGGTaGAGAAGGCTCGTTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AADWHCSFRVDRTEHKAKGVQSR*RRLVAC Trigger: GCAAGCAACGAGCCTTCTCCACCTGCTCTGCACACC...CTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCAAACCTGTGATCCCAGCCATAGGAGAGGATaGTCACAGAGAAGTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TGCVLRKRNRDLYQTCDPSHRRG*SQRSSL Trigger: TAGGGAACTTCTCTGTGATCATCCTCTCCTATGGCT...GGGATCACAGGTTTGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGTTATGCCAGGGAAGCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAAGTGCTCAACCACATTaGAGCTGCAGAATGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASYAREAADWHCSFRVDRSAQPH*SCRMVD Trigger: GTCTACCATTCTGCAGCTCCAATGTGGTTGAGCACT...TCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGGTGTGTCCTCAGAAAAAGGAACAGAGACCTCTACCAAACCTGTGATCCCTGTTCAGTGAGTAGCTaGATGAAGGGCGAATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGCVLRKRNRDLYQTCDPCSVSS*MKGECR Trigger: CCTACATTCGCCCTTCATCCAGCTACTCACTGAACA...GGGATCACAGGTTTGGTAGAGGTCTCTGTTCCTTTTTCTGAGGACACACCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGTCCTCAGAGTGTAGATaGGAGGGTTCAAGGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AADWHCSFRVDRTEHKAKSSECR*EGSRWV Trigger: CACCCACCTTGAACCCTCTCATCTACACTCTGAGGA...CTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGAATGCCAGCCAGAAATaGACACACTCTGGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AADWHCSFRVDRTEHKAKNASQK*THSGAH Trigger: ATGGGCCCCAGAGTGTGTGCATTTCTGGCTGGCATT...CTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | TACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACATCCCCACCACTGAGGTGTAGATaGTGGACACCACCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLEGRTIVLKPPDLFTSPPLRCR*WTPPCP Trigger: AGGACAAGGTGGTGTCCATCATCTACACCTCAGTGG...TGGGGATGTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCTGCACCAGAAATCTCTTTCAAAGCTACTAAAAAGGGGAAGGAATCATAATGCCAGCCAGAAATaGACACACTCTGGGGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGLHQKSLSKLLKRGRNHNASQK*THSGAH Trigger: ATGGGCCCCAGAGTGTGTGCATTTCTGGCTGGCATT...ATGATTCCTTCCCCTTTTTAGTAGCTTTGAAAGAGATTTCTGGTGCAGGCCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGAGCCATAGGAGAGGATaGTCACAGAGAAGTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AADWHCSFRVDRTEHKAKSHRRG*SQRSSL Trigger: TAGGGAACTTCTCTGTGATCATCCTCTCCTATGGCT...CTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGTGTTCAGTGAGTAGCTaGATGAAGGGCGAATGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AADWHCSFRVDRTEHKAKCSVSS*MKGECR Trigger: CCTACATTCGCCCTTCATCCAGCTACTCACTGAACA...CTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGAACAATGCCAATCAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | GATATTTTACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACAGAAGGCTCGTTGCTTaGCCTCAGCTGAGCGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: DILLRRQNNCPKTSRPLYRRLVA*PQLSGS Trigger: AGATCCGCTCAGCTGAGGGCAAGCAACGAGCCTTCT...GTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTAAAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | TACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACATCCCCAAGTGCTCAACCACATTaGAGCTGCAGAATGGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YLEGRTIVLKPPDLFTSPSAQPH*SCRMVD Trigger: GTCTACCATTCTGCAGCTCCAATGTGGTTGAGCACT...TGGGGATGTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR GCA 90 bp | GATATTTTACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACGTAGGATGGTGGAGGTaGAAAGGATGTCCACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: DILLRRQNNCPKTSRPLYVGWWR*KGCPPQ Trigger: CTGTGGTGGACATCCTTTGCACCTCCACCATCCTAC...GTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTAAAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | TACTTAGAAGGCAGAACAATTGTCCTAAAACCTCCAGACCTCTTTACATCCCCACTCGTTCAATTGTGTTaGAGCACAAGAGAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YLEGRTIVLKPPDLFTSPLVQLC*STRELQ Trigger: TTGAAGCTCTCTTGTGCTCCAACACAATTGAACGAG...TGGGGATGTAAAGAGGTCTGGAGGTTTTAGGACAATTGTTCTGCCTTCTAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CCA 90 bp | TCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGGCAGGTCTTATTTCATCACTCGTTCAATTGTGTTaGAGCACAAGAGAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFRVDRTEHKAKAGLISSLVQLC*STRELQ Trigger: TTGAAGCTCTCTTGTGCTCCAACACAATTGAACGAG...TGATGAAATAAGACCTGCCTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CAA 90 bp | GATGTTTCCTGGGAATTTGCTACATGGTCCCAGGGCTTCTCTGTGAAGTGCAGCGAGAAGGCTCGTTGCTaGCCCTCAGCTGAGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DVSWEFATWSQGFSVKCSEKARC*PSAERI Trigger: GATCCGCTCAGCTGAGGGCAAGCAACGAGCCTTCTC...GCTGCACTTCACAGAGAAGCCCTGGGACCATGTAGCAAATTCCCAGGAAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CAA 90 bp | GGCACAGCAGCTGTGTTCCCTGTCACAGTTCCTCTCTGGCCACATCCTTGGAAACATGGCCTCGTTCAATaGTGTTGGAGCACAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTAAVFPVTVPLWPHPWKHGLVQ*CWSTRE Trigger: CTCTCTTGTGCTCCAACACAATTGAACGAGGCCATG...TTTCCAAGGATGTGGCCAGAGAGGAACTGTGACAGGGAACACAGCTGCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGTTATGCCAGGGAAGCTGCTGATTGGCATTGTTCATTCAGAGTGGACAGACATGGCCTCGTTCAATaGTGTTGGAGCACAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASYAREAADWHCSFRVDRHGLVQ*CWSTRE Trigger: CTCTCTTGTGCTCCAACACAATTGAACGAGGCCATG...TCTGTCCACTCTGAATGAACAATGCCAATCAGCAGCTTCCCTGGCATAACTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGGCAGGTCTTATTTCATCAGAGAAGGCTCGTTGCTaGCCCTCAGCTGAGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SFRVDRTEHKAKAGLISSEKARC*PSAERI Trigger: GATCCGCTCAGCTGAGGGCAAGCAACGAGCCTTCTC...TGATGAAATAAGACCTGCCTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCAGAGTGGACAGAACAGAACATAAGGCAAAGGCAGGTCTTATTTCATCACATGGCCTCGTTCAATaGTGTTGGAGCACAAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SFRVDRTEHKAKAGLISSHGLVQ*CWSTRE Trigger: CTCTCTTGTGCTCCAACACAATTGAACGAGGCCATG...TGATGAAATAAGACCTGCCTTTGCCTTATGTTCTGTTCTGTCCACTCTGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
||
| CDS GCA 72 bp | AGTCAGGCTGATAGCCCAGACAATGCCAGCCAGAAATaGACACACTCTGGGGCCCATCCAGGTACTATAATG | + |
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Preference number: 6 (lower is better) Translates to: SQADSPDNASQK*THSGAHPGTIM Trigger: CATTATAGTACCTGGATGGGCCCCAGAGTGTGTGCATTTCTGGCTGGCATTGTCTGGGCTATCAGCCTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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| CDS TCA 72 bp | TTCCTGAGACTGCAGCCATGTATAGGCATAGGAAGCTaGGGAAAAGTAGTATCCGAAGGTGAGGCATATCTG | + |
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Preference number: 6 (lower is better) Translates to: FLRLQPCIGIGS*GKVVSEGEAYL Trigger: CAGATATGCCTCACCTTCGGATACTACTTTTCCTCAGCTTCCTATGCCTATACATGGCTGCAGTCTCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080153.4 ENSMUST00000216053.2 ENSMUST00000217167.2 |
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