Pregenerated sensors for OLFR530 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060974Ensembl transcript IDs: ENSMUST00000074177.3, ENSMUST00000216727.2
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAGCAAACCTTTACAATGACATGGGGTCTGAGAAGAGGCCACCATaGCAGTGTCTGATTCTGGTCTCACATCCATGGATACTGAAATCA | + |
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Preference number: 1 (lower is better) Translates to: LANLYNDMGSEKRPP*QCLILVSHPWILKS Trigger: TGATTTCAGTATCCATGGATGTGAGACCAGAATCAGACACTGGCATGGTGGCCTCTTCTCAGACCCCATGTCATTGTAAAGGTTTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| 3UTR TCA 90 bp | GATGATGGTCAAGTCACAGAAAACTCATCCAGGCAGGAGATATGTTaGGGTACAAGTTATAGTTATGATTTAGCAAACCTTTACAATGAC | + |
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Preference number: 1 (lower is better) Translates to: DDGQVTENSSRQEIC*GTSYSYDLANLYND Trigger: GTCATTGTAAAGGTTTGCTAAATCATAACTATAACTTGTACCTCAACATATCTCCTGCCTGGATGAGTTTTCTGTGACTTGACCATCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| 3UTR GCA 72 bp | CTTTACAATGACATGGGGTCTGAGAAGAGGCCACCATaGCAGTGTCTGATTCTGGTCTCACATCCATGGATA | + |
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Preference number: 3 (lower is better) Translates to: LYNDMGSEKRPP*QCLILVSHPWI Trigger: TATCCATGGATGTGAGACCAGAATCAGACACTGGCATGGTGGCCTCTTCTCAGACCCCATGTCATTGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| 3UTR TCA 72 bp | CAAGTCACAGAAAACTCATCCAGGCAGGAGATATGTTaGGGTACAAGTTATAGTTATGATTTAGCAAACCTT | + |
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Preference number: 3 (lower is better) Translates to: QVTENSSRQEIC*GTSYSYDLANL Trigger: AAGGTTTGCTAAATCATAACTATAACTTGTACCTCAACATATCTCCTGCCTGGATGAGTTTTCTGTGACTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| 3UTR TCA 72 bp | ATGAAAACAGTCAAATCAGATCAGCAAACATCTACATaGAGTGTGGGCAGGGTCTATTATTCTTTATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: MKTVKSDQQTST*SVGRVYYSLFL Trigger: CAGAAATAAAGAATAATAGACCCTGCCCACACTTCATGTAGATGTTTGCTGATCTGATTTGACTGTTTTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| CDS-3UTR TCA 90 bp | GATTTAGCAAACCTTTACAATGACATGGGGTCTGAGAAGAGGCCACCATGCCAGTGGAATAATAAAGGGTaGCCACAACCAGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: DLANLYNDMGSEKRPPCQWNNKG*PQPGGQ Trigger: CTGCCCACCTGGTTGTGGTCACCCTTTATTATTCCA...CTGGCATGGTGGCCTCTTCTCAGACCCCATGTCATTGTAAAGGTTTGCTAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | GATTTAGCAAACCTTTACAATGACATGGGGTCTGAGAAGAGGCCACCATGCCAGGAACCACACAAAGGTTaGAAGGGCCACACAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: DLANLYNDMGSEKRPPCQEPHKG*KGHTDL Trigger: AAGGTCTGTGTGGCCCTTGCAACCTTTGTGTGGTTC...CTGGCATGGTGGCCTCTTCTCAGACCCCATGTCATTGTAAAGGTTTGCTAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| CDS-3UTR TCA 90 bp | AACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAAGTCCAGCTATGGCTGCCATaGACAAGGCAAAGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NLLALYPLLLELFSKLKVQLWLP*TRQRRG Trigger: GCCTCTTCTTTGCCTTGTTCATGGCAGCCATAGCTG...GACTTTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAACAGTGGCCGACAGATTaGAAGGTAGCGGTCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: NELISSLPTASRALLQAQQWPTD*KVAVIG Trigger: GCCTATGACCGCTACCTTGCAATCTGTCGGCCACTG...TTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR TCA 90 bp | ATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAACAGCTATGGCTGCCATaGACAAGGCAAAGAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: MNLLALYPLLLELFSKLKQLWLP*TRQRRG Trigger: GCCTCTTCTTTGCCTTGTTCATGGCAGCCATAGCTG...TTTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | TTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTAGATATGCTGTTCTCTaGCACCAGGCTCTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: LNELISSLPTASRALLQARYAVL*HQALQD Trigger: GTCCTGCAGAGCCTGGTGGCAGAGAACAGCATATCT...AGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | GAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCAGTGGCCGACAGATTaGAAGGTAGCGGTCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: EKEGLNELISSLPTASRAQWPTD*KVAVIG Trigger: GCCTATGACCGCTACCTTGCAATCTGTCGGCCACTG...AGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CCA 90 bp | ATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAAAAGTACATGGGAGTGTaGAGGTTGGGACTGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: MNLLALYPLLLELFSKLKKYMGV*RLGLLW Trigger: CCACAGCAGTCCCAACCTCCACACTCCCATGTACTT...TTTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR TCA 90 bp | GAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAAGTTGTACAGAACAGCAATaGGTTTGTCCAGGAACCCAG | + |
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Preference number: 4 (lower is better) Translates to: ELISSLPTASRALLQAQSCTEQQ*VCPGTQ Trigger: CTGGGTTCCTGGACAAACTCATTGCTGTTCTGTACA...ACTTTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAGCAAGACAGTCACAGTaGAGATCACATCCATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NELISSLPTASRALLQAQARQSQ*RSHPSG Trigger: CCCTGATGGATGTGATCTGCACTGTGACTGTCTTGC...TTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | TTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTGCAAGACAGTCACAGTaGAGATCACATCCATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LNELISSLPTASRALLQAARQSQ*RSHPSG Trigger: CCCTGATGGATGTGATCTGCACTGTGACTGTCTTGC...AGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR TCA 90 bp | GAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTTGGAATAATAAAGGGTaGCCACAACCAGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EKEGLNELISSLPTASRAWNNKG*PQPGGQ Trigger: CTGCCCACCTGGTTGTGGTCACCCTTTATTATTCCA...AGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTTCTGCCACCAGGCTCTaGAGGACTTTGGGCAAGACA | + |
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Preference number: 4 (lower is better) Translates to: KREKEGLNELISSLPTASSATRL*RTLGKT Trigger: TGTCTTGCCCAAAGTCCTGCAGAGCCTGGTGGCAGA...AGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | GAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTATCCCCCATAAGATATaGTGTTCTCTGCCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: EKEGLNELISSLPTASRAIPHKI*CSLPPG Trigger: GCCTGGTGGCAGAGAACAGCATATCTTATGGGGGAT...AGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTAAGTACATGGGAGTGTaGAGGTTGGGACTGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QKREKEGLNELISSLPTAKYMGV*RLGLLW Trigger: CCACAGCAGTCCCAACCTCCACACTCCCATGTACTT...AGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGATATGCTGTTCTCTaGCACCAGGCTCTGCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: KREKEGLNELISSLPTASRYAVL*HQALQD Trigger: GTCCTGCAGAGCCTGGTGGCAGAGAACAGCATATCT...AGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTATCCCCCATAAGATATaGTGTTCTCTGCCACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KREKEGLNELISSLPTASIPHKI*CSLPPG Trigger: GCCTGGTGGCAGAGAACAGCATATCTTATGGGGGAT...AGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AGTCAGAAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGAACCACACAAAGGTTaGAAGGGCCACACAGACCTT | + |
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Preference number: 4 (lower is better) Translates to: SQKREKEGLNELISSLPTEPHKG*KGHTDL Trigger: AAGGTCTGTGTGGCCCTTGCAACCTTTGTGTGGTTC...AGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTTCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AGTCAGAAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTTCATCAACAAACCTTTaGAGGATGAACATGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: SQKREKEGLNELISSLPTSSTNL*RMNMVT Trigger: TGTGACCATGTTCATCCTGCAAAGGTTTGTTGATGA...AGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTTCTGACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR GCA 90 bp | AAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTTCATCAACAAACCTTTaGAGGATGAACATGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: KREKEGLNELISSLPTASSSTNL*RMNMVT Trigger: TGTGACCATGTTCATCCTGCAAAGGTTTGTTGATGA...AGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS TCA 90 bp | GCAGAAGCTCAGAGCCCAGGACCCAGGAGAAGACGAACATCTGTGTaGGGCATCCCCCATAAGATATGCTGTTCTCTGCCACCAGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: AEAQSPGPRRRRTSV*GIPHKICCSLPPGS Trigger: AGAGCCTGGTGGCAGAGAACAGCATATCTTATGGGGGATGCCTCACACAGATGTTCGTCTTCTCCTGGGTCCTGGGCTCTGAGCTTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | GATTTAGCAAACCTTTACAATGACATGGGGTCTGAGAAGAGGCCACCATGCCAGGAGAAGGCACGCTTTTaGCCCTCAGCTGAGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: DLANLYNDMGSEKRPPCQEKARF*PSAERM Trigger: CATCCGCTCAGCTGAGGGCAAAAAGCGTGCCTTCTC...CTGGCATGGTGGCCTCTTCTCAGACCCCATGTCATTGTAAAGGTTTGCTAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216727.2 |
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| CDS CCA 90 bp | CCCCATAAGATATGCTGTTCTCTGCCACCAGGCTCTGCAGGACTTTaGGCAAGACAGTCACAGTGCAGATCACATCCATCAGGGAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PHKICCSLPPGSAGL*ARQSQCRSHPSGKD Trigger: ATCTTTCCCTGATGGATGTGATCTGCACTGTGACTGTCTTGCCCAAAGTCCTGCAGAGCCTGGTGGCAGAGAACAGCATATCTTATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | TTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTATGGGAGTGTGGAGGTaGGGACTGCTGTGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: LNELISSLPTASRALLQAMGVWR*GLLWMV Trigger: AACCATCCACAGCAGTCCCAACCTCCACACTCCCAT...AGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | AATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAATGGGAGTGTGGAGGTaGGGACTGCTGTGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: NELISSLPTASRALLQAQMGVWR*GLLWMV Trigger: AACCATCCACAGCAGTCCCAACCTCCACACTCCCAT...TTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | ATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAAGTGAGCACCAAGGAATaGAGAGCTCCAGTGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: MNLLALYPLLLELFSKLKVSTKE*RAPVNH Trigger: GTGGTTCACTGGAGCTCTCAATTCCTTGGTGCTCAC...TTTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | AAAAGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTGAGAAGGCACGCTTTTaGCCCTCAGCTGAGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: KREKEGLNELISSLPTASEKARF*PSAERM Trigger: CATCCGCTCAGCTGAGGGCAAAAAGCGTGCCTTCTC...AGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | AGAGAAAAAGAAGGCTTGAATGAACTTATTAGCTCTTTACCCACTGCTTCTAGAGTGAGCACCAAGGAATaGAGAGCTCCAGTGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: REKEGLNELISSLPTASRVSTKE*RAPVNH Trigger: GTGGTTCACTGGAGCTCTCAATTCCTTGGTGCTCAC...TCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTCATTCAAGCCTTCTTTTTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS-3UTR CAA 90 bp | GAACTTATTAGCTCTTTACCCACTGCTTCTAGAGCTCTTCTCCAAGCTCAAAGTACAGTCATGATGTCATaGATAAAGGTGGGACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ELISSLPTASRALLQAQSTVMMS*IKVGLQ Trigger: CTGCAGTCCCACCTTTATCAATGACATCATGACTGT...ACTTTGAGCTTGGAGAAGAGCTCTAGAAGCAGTGGGTAAAGAGCTAATAAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS TCA 72 bp | CAAAGGTTGCAAGGGCCACACAGACCTTGCCGCTCATaGGGGTGCCATAGTGCAGTGGCCGACAGATTGCAA | + |
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Preference number: 6 (lower is better) Translates to: QRLQGPHRPCRS*GCHSAVADRLQ Trigger: TTGCAATCTGTCGGCCACTGCACTATGGCACCCTCATGAGCGGCAAGGTCTGTGTGGCCCTTGCAACCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS CAA 90 bp | GTGTGGAGGTTGGGACTGCTGTGGATGGTTGCGATGATCAGGCCATaGCCAGCTATGGCTGCCATGAACAAGGCAAAGAAGAGGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VWRLGLLWMVAMIRP*PAMAAMNKAKKRQK Trigger: CTTCTGCCTCTTCTTTGCCTTGTTCATGGCAGCCATAGCTGGCAATGGCCTGATCATCGCAACCATCCACAGCAGTCCCAACCTCCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS GCA 72 bp | CAAGGAATTGAGAGCTCCAGTGAACCACACAAAGGTTaGAAGGGCCACACAGACCTTGCCGCTCATGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: QGIESSSEPHKG*KGHTDLAAHEG Trigger: ACCCTCATGAGCGGCAAGGTCTGTGTGGCCCTTGCAACCTTTGTGTGGTTCACTGGAGCTCTCAATTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS TCA 72 bp | TCAGAGATGGGGTCACAGTGGTGTACAGAACAGCAATaGGTTTGTCCAGGAACCCAGCAGTTCCTAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SEMGSQWCTEQQ*VCPGTQQFLGL Trigger: CAGCCCTAGGAACTGCTGGGTTCCTGGACAAACTCATTGCTGTTCTGTACACCACTGTGACCCCATCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS CAA 72 bp | TTGGGACTGCTGTGGATGGTTGCGATGATCAGGCCATaGCCAGCTATGGCTGCCATGAACAAGGCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LGLLWMVAMIRP*PAMAAMNKAKK Trigger: CTTCTTTGCCTTGTTCATGGCAGCCATAGCTGGCAATGGCCTGATCATCGCAACCATCCACAGCAGTCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS GCA 72 bp | GATGGTTGCGATGATCAGGCCATTGCCAGCTATGGCTaGCATGAACAAGGCAAAGAAGAGGCAGAAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: DGCDDQAIASYG*HEQGKEEAEEN Trigger: GTTCTCTTCTGCCTCTTCTTTGCCTTGTTCATGGCAGCCATAGCTGGCAATGGCCTGATCATCGCAACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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| CDS CAA 72 bp | GTCAGGAACATGTCTGTAATAACAGTCATGATGTCATaGATAAAGGTGGGACTGCAGGACAGTATCAATACA | + |
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Preference number: 6 (lower is better) Translates to: VRNMSVITVMMS*IKVGLQDSINT Trigger: TGTATTGATACTGTCCTGCAGTCCCACCTTTATCAATGACATCATGACTGTTATTACAGACATGTTCCTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074177.3 ENSMUST00000216727.2 |
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