Pregenerated sensors for OLFR53 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094819Ensembl transcript IDs: ENSMUST00000084456.6, ENSMUST00000211057.2, ENSMUST00000211399.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTTATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAGAGATAAATAAACCATaGTCCATGAAGCTGCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FIAFEVTVSGMVQFLHQTEINKP*SMKLLL Trigger: TAAGAGCAGCTTCATGGAGCATGGTTTATTTATCTC...TGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAATAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR GCA 90 bp | ATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAATACACCCACGGCCAGTaGTCCACAGAGCTGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: IAFEVTVSGMVQFLHQTKYTHGQ*STELWA Trigger: AGCCCACAGCTCTGTGGAGCACTGGCCGTGGGTGTA...TTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR GCA 90 bp | ATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAATGCGGATGTTGCCCATaGAAGGAAGAAGAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IAFEVTVSGMVQFLHQTKCGCCP*KEEELG Trigger: GCCCAGCTCTTCTTCCTTGCATGGGCAACATCCGCA...TTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR GCA 90 bp | ATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAAGAGCAGCAACAGCTCTaGGGATGTTGCCCATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: IAFEVTVSGMVQFLHQTKEQQQL*GCCPCK Trigger: CTTGCATGGGCAACATCCGCAGAGCTGTTGCTGCTC...TTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR CCA 90 bp | ATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAAGGAGAGCAGGAGGAGTaGGGGTATCTCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: IAFEVTVSGMVQFLHQTKGEQEE*GYLTEE Trigger: TTCTTCTGTGAGATACCCCCACTCCTCCTGCTCTCC...TTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR TCA 90 bp | GGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAACTTCTATAAAAATGCATTCACAGCACTaGTGGACCATACACCCACGG | + |
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Preference number: 4 (lower is better) Translates to: GYSEWNGTVFASDKTSIKMHSQH*WTIHPR Trigger: CCGTGGGTGTATGGTCCATCAGTGCTGTGAATGCAT...TTTTATAGAAGTTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR GCA 90 bp | GGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAACTTCTATAAAACAGCTCTGCGGATGTTaGCCATGCAAGGAAGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GYSEWNGTVFASDKTSIKQLCGC*PCKEEE Trigger: CTCTTCTTCCTTGCATGGGCAACATCCGCAGAGCTG...TTTTATAGAAGTTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR CCA 90 bp | GGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAACTTCTATAAAAAAGTACATGGGATTGTaGAGTCCAGTGCTGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: GYSEWNGTVFASDKTSIKKYMGL*SPVLEV Trigger: CACCTCCAGCACTGGACTCCACAATCCCATGTACTT...TTTTATAGAAGTTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACC 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS GCA 90 bp | ATAGGCCATGACCGTGAGCAGCAACAGCTCTGCGGATGTTGCCCATaGAAGGAAGAAGAGCTGGGCCATACATCCCTTGAAGGTGATGAT | + |
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Preference number: 5 (lower is better) Translates to: IGHDREQQQLCGCCP*KEEELGHTSLEGDD Trigger: ATCATCACCTTCAAGGGATGTATGGCCCAGCTCTTCTTCCTTGCATGGGCAACATCCGCAGAGCTGTTGCTGCTCACGGTCATGGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR CAA 90 bp | GGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAACTTCTATAAAAGAAAAGGCCTTCCTCTaGCCCTCAGCAGAACGCATG | + |
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Preference number: 5 (lower is better) Translates to: GYSEWNGTVFASDKTSIKEKAFL*PSAERM Trigger: CATGCGTTCTGCTGAGGGCAAGAGGAAGGCCTTTTC...TTTTATAGAAGTTTTGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR CAA 90 bp | TTTATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACACTGCCCAAGGCAAGCTaGACATCCTTGTTCCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: FIAFEVTVSGMVQFLHQTLPKAS*TSLFLS Trigger: ACTGAGGAACAAGGATGTCAAGCTTGCCTTGGGCAG...TGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR CAA 90 bp | TTTATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACATCCGTGGTAGCCAGGTaGCACAGGAAAAAGTACATG | + |
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Preference number: 5 (lower is better) Translates to: FIAFEVTVSGMVQFLHQTSVVAR*HRKKYM Trigger: CATGTACTTTTTCCTGTGCAACCTGGCTACCACGGA...TGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS-3UTR CAA 90 bp | TTTATTGCTTTTGAGGTTACAGTGAGTGGAATGGTACAGTTTTTGCATCAGACAAAAAAGTACATGGGATaGTGGAGTCCAGTGCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FIAFEVTVSGMVQFLHQTKKYMG*WSPVLE Trigger: CTCCAGCACTGGACTCCACAATCCCATGTACTTTTT...TGTCTGATGCAAAAACTGTACCATTCCACTCACTGTAACCTCAAAAGCAATAAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS GCA 72 bp | GGCCATGACCGTGAGCAGCAACAGCTCTGCGGATGTTaGCCATGCAAGGAAGAAGAGCTGGGCCATACATCC | + |
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Preference number: 6 (lower is better) Translates to: GHDREQQQLCGC*PCKEEELGHTS Trigger: GGATGTATGGCCCAGCTCTTCTTCCTTGCATGGGCAACATCCGCAGAGCTGTTGCTGCTCACGGTCATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS GCA 72 bp | GACCGTGAGCAGCAACAGCTCTGCGGATGTTGCCCATaGAAGGAAGAAGAGCTGGGCCATACATCCCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: DREQQQLCGCCP*KEEELGHTSLE Trigger: TTCAAGGGATGTATGGCCCAGCTCTTCTTCCTTGCATGGGCAACATCCGCAGAGCTGTTGCTGCTCACGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS CCA 72 bp | AGCTCTGCGGATGTTGCCCATGCAAGGAAGAAGAGCTaGGCCATACATCCCTTGAAGGTGATGATGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSADVAHARKKS*AIHPLKVMMFS Trigger: GGAAAACATCATCACCTTCAAGGGATGTATGGCCCAGCTCTTCTTCCTTGCATGGGCAACATCCGCAGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084456.6 |
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| CDS GCA 72 bp | AAGAAGCAGCCTGTCAGGAACAGTCTTAGACCAGGATaGTCTGAGAACCCTTCCAGCACAAACTCTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: KKQPVRNSLRPG*SENPSSTNSVT Trigger: AGTGACAGAGTTTGTGCTGGAAGGGTTCTCAGAGCATCCTGGTCTAAGACTGTTCCTGACAGGCTGCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084456.6 ENSMUST00000211057.2 ENSMUST00000211399.2 |
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