Pregenerated sensors for OLFR524 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050366Ensembl transcript IDs: ENSMUST00000051943.6, ENSMUST00000215815.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCCCGGCACTTGGCTAGTCCTGCTGAAGGCAGGCACCAGACCCTaGCTTCCAGTGTTGGAGCCAAGCTCTGGGTTGCCTGATTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: GPGTWLVLLKAGTRP*LPVLEPSSGLPDSQ Trigger: CTGAGAATCAGGCAACCCAGAGCTTGGCTCCAACACTGGAAGTCAGGGTCTGGTGCCTGCCTTCAGCAGGACTAGCCAAGTGCCGGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | TTCATGAGCACAGCCTTTGCATGGGTTCAGGGAAGGGCTCCTGAGTaGGTCCTGACCTCAGACCTGGGAGCCATGCTGCTGCAGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: FMSTAFAWVQGRAPE*VLTSDLGAMLLQLA Trigger: AGCCAGCTGCAGCAGCATGGCTCCCAGGTCTGAGGTCAGGACCCACTCAGGAGCCCTTCCCTGAACCCATGCAAAGGCTGTGCTCATGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR TCA 90 bp | GCAGAATTCAGGGGCTGGCGGGAGGGCATGCCAATCTGTTCACCCTaGTGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: AEFRGWREGMPICSP*WTGEQVQDWGSMVP Trigger: AGGAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCATGCCCTCCCGCCAGCCCCTGAATTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR TCA 90 bp | CACCAGACCCTGACTTCCAGTGTTGGAGCCAAGCTCTGGGTTGCCTaGTTCTCAGGTCTCTGTGAGGTTGGGCAGCACCCAGACAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: HQTLTSSVGAKLWVA*FSGLCEVGQHPDRA Trigger: AGCCCTGTCTGGGTGCTGCCCAACCTCACAGAGACCTGAGAATCAGGCAACCCAGAGCTTGGCTCCAACACTGGAAGTCAGGGTCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | TTCCTGTCCTGGCCTCACTTTTACTCCGTAGGCTCCTGGCAGAGCTaGAAGCTGGCTGGTGCTTATCAGGGGGCTGAGAGGCTGTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: FLSWPHFYSVGSWQS*KLAGAYQGAERLSL Trigger: CAGAGACAGCCTCTCAGCCCCCTGATAAGCACCAGCCAGCTTCCAGCTCTGCCAGGAGCCTACGGAGTAAAAGTGAGGCCAGGACAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR TCA 90 bp | TGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACTaGTTAGATGTGCCAGGCTGCAGCCCTGCTCCTCCATTCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: WVRVGLCHVLAKRRN*LDVPGCSPAPPFSQ Trigger: CTGAGAGAATGGAGGAGCAGGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR GCA 90 bp | ACCTCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATaGTCACACCCGTGCTCCAGGACAAGGACCATGCTTGCAAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: TSLCGLGRLKDSALT*SHPCSRTRTMLASF Trigger: GAAGCTTGCAAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | GGACTTTCAACCCTGAGGTGGCTTGGGCAGAAGAGGTTGGGGAAGTaGGTGGTAGGAGCCTATGATATTACTCAGATGGGCCCAGGGTAT | + |
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Preference number: 1 (lower is better) Translates to: GLSTLRWLGQKRLGK*VVGAYDITQMGPGY Trigger: ATACCCTGGGCCCATCTGAGTAATATCATAGGCTCCTACCACCCACTTCCCCAACCTCTTCTGCCCAAGCCACCTCAGGGTTGAAAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR TCA 90 bp | GTGGCTTGGGCAGAAGAGGTTGGGGAAGTGGGTGGTAGGAGCCTATaGTATTACTCAGATGGGCCCAGGGTATGGAGTATTACTAACCGA | + |
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Preference number: 1 (lower is better) Translates to: VAWAEEVGEVGGRSL*YYSDGPRVWSITNR Trigger: TCGGTTAGTAATACTCCATACCCTGGGCCCATCTGAGTAATATCATAGGCTCCTACCACCCACTTCCCCAACCTCTTCTGCCCAAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR TCA 90 bp | GTGATGGATTTTCAGGTGTGGGTAGCTGGGGATAACAGAAGCAGATaGCCCAGACTGATACCCGGTGAGTGTATGCCATGTAGGGAACCC | + |
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Preference number: 1 (lower is better) Translates to: VMDFQVWVAGDNRSR*PRLIPGECMPCREP Trigger: GGGTTCCCTACATGGCATACACTCACCGGGTATCAGTCTGGGTCATCTGCTTCTGTTATCCCCAGCTACCCACACCTGAAAATCCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR GCA 90 bp | ACTCTGCCCTCACATGCTCACACCCGTGCTCCAGGACAAGGACCATaGTTGCAAGCTTCATGTTGGTTGCTATTTAGCACGATGCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: TLPSHAHTRAPGQGP*LQASCWLLFSTMPV Trigger: AACAGGCATCGTGCTAAATAGCAACCAACATGAAGCTTGCAAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATGTGAGGGCAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR GCA 90 bp | TGCTCCTCCATTCTCTCAGCAGCTTCCACGATAGCCAGCCACCCTTaGCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTA | + |
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Preference number: 1 (lower is better) Translates to: CSSILSAASTIASHP*HSPIFLLLHHGLLL Trigger: TAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCTATCGTGGAAGCTGCTGAGAGAATGGAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | CTAGCCTGGCCTCAAACTGATAGAGATCCATCTGCCTCTGCCCCCTaGGTGCTGGGATTAAAGTGTGTATCACCATGTCTGGCTCATAGA | + |
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Preference number: 1 (lower is better) Translates to: LAWPQTDRDPSASAP*VLGLKCVSPCLAHR Trigger: TCTATGAGCCAGACATGGTGATACACACTTTAATCCCAGCACCCAGGGGGCAGAGGCAGATGGATCTCTATCAGTTTGAGGCCAGGCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | AGCCAGCCACCCTTGCCATTCACCAATCTTTCTCCTTCTCCATCATaGGCTCCTACTACTCACCACCTCACAGGGCTTTGCTTTCTTCTG | + |
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Preference number: 1 (lower is better) Translates to: SQPPLPFTNLSPSPS*APTTHHLTGLCFLL Trigger: CAGAAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | CAAGTCAGGATCCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTTaGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: QVRILAPGPLCLGFT*VRVGLCHVLAKRRN Trigger: GTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGGATCCTGACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | CATGGGCTCCTACTACTCACCACCTCACAGGGCTTTGCTTTCTTCTaGACATATCCATCCTGGATAGTGGGTGAACAGAATGGGTGCTTC | + |
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Preference number: 1 (lower is better) Translates to: HGLLLLTTSQGFAFF*TYPSWIVGEQNGCF Trigger: GAAGCACCCATTCTGTTCACCCACTATCCAGGATGGATATGTCCAGAAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | CCCTCAGGTGAGAAGAGCTGTGGCTATAGGTTGACCATGGTTGGTTaGAAAGAATTCTTTCATGAGCACAGCCTTTGCATGGGTTCAGGG | + |
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Preference number: 1 (lower is better) Translates to: PSGEKSCGYRLTMVG*KEFFHEHSLCMGSG Trigger: CCCTGAACCCATGCAAAGGCTGTGCTCATGAAAGAATTCTTTCCAACCAACCATGGTCAACCTATAGCCACAGCTCTTCTCACCTGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | CCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTTGGGTCAGGGTTaGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACTGATTAGATGT | + |
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Preference number: 1 (lower is better) Translates to: PSSWSTVFGVYLGQG*ALPRSGKKKELIRC Trigger: ACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CCA 90 bp | TGTAGCAGAGAACACTTGTGGTTTGTCTCTCTGTTCTCAGAACTTTaGGCCAGCCAAGTCAGGATCCTAGCTCCTGGTCCACTGTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: CSREHLWFVSLFSEL*ASQVRILAPGPLCL Trigger: CAAACACAGTGGACCAGGAGCTAGGATCCTGACTTGGCTGGCCCAAAGTTCTGAGAACAGAGAGACAAACCACAAGTGTTCTCTGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR TCA 90 bp | GGTCTTCTCTGCTCCCCTCAGGTGAGAAGAGCTGTGGCTATAGGTTaGCCATGGTTGGTTGGAAAGAATTCTTTCATGAGCACAGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: GLLCSPQVRRAVAIG*PWLVGKNSFMSTAF Trigger: AAAGGCTGTGCTCATGAAAGAATTCTTTCCAACCAACCATGGTCAACCTATAGCCACAGCTCTTCTCACCTGAGGGGAGCAGAGAAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR GCA 90 bp | CAGCTCTATCTACTTCATCCATTTGTCCCTTTTCTTACTAGCCTCTaGAACTGCAAGGCCCCTTCTGCTGGAAGACAAACCTCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: QLYLLHPFVPFLTSL*NCKAPSAGRQTSWK Trigger: CTTCCAGGAGGTTTGTCTTCCAGCAGAAGGGGCCTTGCAGTTGCAGAGGCTAGTAAGAAAAGGGACAAATGGATGAAGTAGATAGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR GCA 90 bp | TTCACCAGTCATTTCGTGAGAAGCAGAGCACTTTGGGTCAATGTTTaGTTAGAGCTCCTAATTTGCCTGGCTTTGCTCCTCTCTCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: FTSHFVRSRALWVNV*LELLICLALLLSPL Trigger: AAGAGGAGAGAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTCACGAAATGACTGGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR GCA 90 bp | AGAAGCAGAGCACTTTGGGTCAATGTTTGCTTAGAGCTCCTAATTTaGCTGGCTTTGCTCCTCTCTCCTCTTACTCAAATCTCCTTTGTA | + |
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Preference number: 1 (lower is better) Translates to: RSRALWVNVCLELLI*LALLLSPLTQISFV Trigger: TACAAAGGAGATTTGAGTAAGAGGAGAGAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCACCAGGGCTCCCACACCCCTTACTGAGTCACTTCCCTCATCCTTGGTGTACTCCGTAGGCTCCTaGCAGAGCTGGAAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LPTRAPTPLTESLPSSLVYSVGS*QSWKLA Trigger: AGCCAGCTTCCAGCTCTGCCAGGAGCCTACGGAGTA...CACCAAGGATGAGGGAAGTGACTCAGTAAGGGGTGTGGGAGCCCTGGTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTTGGGTCAGGGTTGGGCTTTGACCCTGATGGACTGGTaGGCAGGTTCAGGACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PSSWSTVFGVYLGQGWALTLMDW*AGSGLG Trigger: CCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGT...CAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 90 bp | CTTTGGGCCAGCCAAGTCAGGATCCTAGCTCCTGGTCCACTGTGTTaGGGGTTTACTTGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LWASQVRILAPGPLC*GFTWVRVGLCHVLA Trigger: TGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGGATCCTGACTTGGCTGGCCCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTGGTGCTTATCAGGGGGCTGAGAGGCTGTCTCTGTTCAGCAGTATTCAATCAGGGAAGGGCTCCTaGGTGGGTCCTGACCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: LAGAYQGAERLSLFSSIQSGKGS*VGPDLR Trigger: TCTGAGGTCAGGACCCACTCAGGAGCCCTTCCCTGA...TTGAATACTGCTGAACAGAGACAGCCTCTCAGCCCCCTGATAAGCACCAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATGCTCACACCCGGGCAGAGCTGGAAGCTaGCTGGTGCTTATCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SLCGLGRLKDSALTCSHPGRAGS*LVLIRG Trigger: CCCCCTGATAAGCACCAGCCAGCTTCCAGCTCTGCC...CGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCCACGTTCTGGCAAAAAGAAGGAACTGATTAGATGTGCCAGGCTGCAGCCCACCTGGGAGCCATGCTaGTGCAGCTGGCTTGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: LPRSGKKKELIRCARLQPTWEPC*CSWLVA Trigger: GGCTACAAGCCAGCTGCAGCAGCATGGCTCCCAGGT...GGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGCCACCCTTGCCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTATTCTCAGGTCTCTGTaGGGTTGGGCAGCACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SQPPLPFTNLSPSPSWAPILRSL*GWAAPR Trigger: TCTGGGTGCTGCCCAACCTCACAGAGACCTGAGAAT...AGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTTGGGTCAGGGTTGGGCTTTGTCCCACACCCCTTACTaGGTCACTTCCCTCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: PSSWSTVFGVYLGQGWALSHTPY*VTSLIL Trigger: AAGGATGAGGGAAGTGACTCAGTAAGGGGTGTGGGA...CAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 90 bp | CTGCTCCTCCATTCTCTCAGCAGCTTCCACGATAGCCAGCCACCCTaGCCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACT | + |
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Preference number: 2 (lower is better) Translates to: LLLHSLSSFHDSQPP*PFTNLSPSPSWAPT Trigger: AGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCTATCGTGGAAGCTGCTGAGAGAATGGAGGAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGTGCTTATCAGGGGGCTaGGAGGCTGTCTCTGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRCLSGG*EAVSVQ Trigger: CTGAACAGAGACAGCCTCTCAGCCCCCTGATAAGCA...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | ACCACCTCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATGCTCACATGAGCACAGCCTTTaGATGGGTTCAGGGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: TTSLCGLGRLKDSALTCSHEHSL*MGSGKG Trigger: GCCCTTCCCTGAACCCATGCAAAGGCTGTGCTCATG...TGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGAGGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGCTGCAAGGCCCCTTCTaGTGGAAGACAAACCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRLQGPF*WKTNLL Trigger: CAGGAGGTTTGTCTTCCAGCAGAAGGGGCCTTGCAG...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTACTTGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACTCTGCCTCTGCCCCCTaGGTGCTGGGATTAAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GFTWVRVGLCHVLAKRRNSASAP*VLGLKC Trigger: ACACTTTAATCCCAGCACCCAGGGGGCAGAGGCAGA...GTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCCACCCTTGCCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTCTTTCAACCCTGAGGTaGCTTGGGCAGAAGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SQPPLPFTNLSPSPSWAPLSTLR*LGQKRL Trigger: CAACCTCTTCTGCCCAAGCCACCTCAGGGTTGAAAG...AGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 90 bp | CTGCCCTCACATGCTCACACCCGTGCTCCAGGACAAGGACCATGCTaGCAAGCTTCATGTTGGTTGCTATTTAGCACGATGCCTGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LPSHAHTRAPGQGPC*QASCWLLFSTMPVL Trigger: TAGAACAGGCATCGTGCTAAATAGCAACCAACATGAAGCTTGCAAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATGTGAGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 90 bp | CCAAGTCAGGATCCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTaGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PSQDPSSWSTVFGVY*GQGWALPRSGKKKE Trigger: TTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGGATCCTGACTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATGCTCACACCCGTGCTATGGTCTTCTCTaGTCCCCTCAGGTGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: SLCGLGRLKDSALTCSHPCYGLL*SPQVRR Trigger: TCTTCTCACCTGAGGGGAGCAGAGAAGACCATAGCA...CGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATGCTCACACCCGTGCTCCTGCGTGGCATaGAGAGCTAAAAGATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLCGLGRLKDSALTCSHPCSCVA*RAKRSV Trigger: CACAGATCTTTTAGCTCTGCATGCCACGCAGGAGCA...CGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGGGTCATTGCTGCTCCTaGGTGGCATGCAGAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRGHCCS*VACRAK Trigger: TTTAGCTCTGCATGCCACGCAGGAGCAGCAATGACC...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGGTTGGGCAGCACCCAGACAGGGCTGATATTTCATATACTTTACAAAGGGACTCTGCCCTCACATaGTCACACCCGTGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CEVGQHPDRADISYTLQRDSALT*SHPCSR Trigger: CCTGGAGCACGGGTGTGAGCATGTGAGGGCAGAGTC...CCTTTGTAAAGTATATGAAATATCAGCCCTGTCTGGGTGCTGCCCAACCTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGGCTTTGCTTTCTTGACCCCTTCCTGTCCTaGCCTCACTTTTACTCCGTA | + |
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Preference number: 2 (lower is better) Translates to: PSPSWAPTTHHLTGLCFLDPFLS*PHFYSV Trigger: TACGGAGTAAAAGTGAGGCCAGGACAGGAAGGGGTC...AAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 90 bp | GATTGGCCTTGTCCCCTCCATGGACATGTCGGCCTCTATACTCAGTaGTACTGCTGCACAAACACCTGTCCATCCCCGATAACACACATA | + |
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Preference number: 2 (lower is better) Translates to: DWPCPLHGHVGLYTQ*YCCTNTCPSPITHI Trigger: TATGTGTGTTATCGGGGATGGACAGGTGTTTGTGCAGCAGTACAACTGAGTATAGAGGCCGACATGTCCATGGAGGGGACAAGGCCAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACGTTCTGGCAAAAAGAAGGAACTGATTAGATGTGCCAGGCTGCAGCCCATCCTGGATAGTGGGTaGACAGAATGGGTGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPRSGKKKELIRCARLQPILDSG*TEWVLP Trigger: TGGAAGCACCCATTCTGTTCACCCACTATCCAGGAT...GGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCAGCCACCCTTGCCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTTTTCTTACTAGCCTCTaGAACTGCAAGGCCCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SQPPLPFTNLSPSPSWAPFLTSL*NCKAPS Trigger: AGAAGGGGCCTTGCAGTTGCAGAGGCTAGTAAGAAA...AGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | AACACACATACCAACCAGGGTCCCGGCACTTGGCTAGTCCTGCTGAAGGCAGGCTTGCAAGCTTCATGTTaGTTGCTATTTAGCACGATG | + |
|
Preference number: 2 (lower is better) Translates to: NTHTNQGPGTWLVLLKAGLQASC*LLFSTM Trigger: CATCGTGCTAAATAGCAACCAACATGAAGCTTGCAA...GCCTGCCTTCAGCAGGACTAGCCAAGTGCCGGGACCCTGGTTGGTATGTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCACTAGTTTACAAGTGTTTGGAGAGGGCATGCTTGTGAATTTTGATCTAGAGCTCCTGAGTGGGTCCTaGCCTCAGACCTGGGAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: STSLQVFGEGMLVNFDLELLSGS*PQTWEP Trigger: TGGCTCCCAGGTCTGAGGTCAGGACCCACTCAGGAG...CTCTAGATCAAAATTCACAAGCATGCCCTCTCCAAACACTTGTAAACTAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTACTTGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACATTGCTGCTCCTGCGTaGCATGCAGAGCTAAAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GFTWVRVGLCHVLAKRRNIAAPA*HAELKD Trigger: ATCTTTTAGCTCTGCATGCCACGCAGGAGCAGCAAT...GTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTACTTGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACACCCAAGGGGAGGGCTaGGATATGTTAGTCTTGATA | + |
|
Preference number: 2 (lower is better) Translates to: GFTWVRVGLCHVLAKRRNTQGEG*DMLVLI Trigger: TATCAAGACTAACATATCCCAGCCCTCCCCTTGGGT...GTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGGGCTGAGAGGCTGTCTCTGTTCAGCAGTATTCAAAGTCTCTTCAGCTCTGAAAGAATTCTTTCATaGGCACAGCCTTTGCATGGG | + |
|
Preference number: 2 (lower is better) Translates to: QGAERLSLFSSIQSLFSSERILS*AQPLHG Trigger: CCCATGCAAAGGCTGTGCTCATGAAAGAATTCTTTC...AGAGCTGAAGAGACTTTGAATACTGCTGAACAGAGACAGCCTCTCAGCCCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCCAGCCACCCTTGCCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTGCACCCAGACAGGGCTaGTATTTCATATACTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: SQPPLPFTNLSPSPSWAPAPRQG*YFIYFT Trigger: TGTAAAGTATATGAAATATCAGCCCTGTCTGGGTGC...AGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CAA 90 bp | GGATCCGATAAAGGACAGAATCTTGTAGCAGAGAACACTTGTGGTTaGTCTCTCTGTTCTCAGAACTTTGGGCCAGCCAAGTCAGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: GSDKGQNLVAENTCG*SLCSQNFGPAKSGS Trigger: GGATCCTGACTTGGCTGGCCCAAAGTTCTGAGAACAGAGAGACAAACCACAAGTGTTCTCTGCTACAAGATTCTGTCCTTTATCGGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGGCTTTGCTTTCTTCTGCTCAGAGTGATTTaGTGGCTTTATCCAATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PSPSWAPTTHHLTGLCFLLLRVI*WLYPMR Trigger: TCTCATTGGATAAAGCCATCAAATCACTCTGAGCAG...AAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAGGTTGGGCAGCACCCAGACAGGGCTGATATTTCATATACTTTACAAAGGCCAGGACAAGGACCATaGTTGCAAGCTTCATGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CEVGQHPDRADISYTLQRPGQGP*LQASCW Trigger: CCAACATGAAGCTTGCAAGCATGGTCCTTGTCCTGG...CCTTTGTAAAGTATATGAAATATCAGCCCTGTCTGGGTGCTGCCCAACCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAGCCACCCTTGCCATTCACCAATCTTTCTCCTTCTCCATCATGGGCTCCTCTCTGGGTTCTCTATTaGAAATACAGAGATGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SQPPLPFTNLSPSPSWAPLWVLY*KYRDGY Trigger: ATACCCATCTCTGTATTTGCAATAGAGAACCCAGAG...AGGAGCCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGCCACGTTCTGGCAAAAAGAAGGAACTGATTAGATGTGCCAGGCTGCAGCCCAGAAGCAGAGCACTTTaGGTCAATGTTTGCTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LPRSGKKKELIRCARLQPRSRAL*VNVCLE Trigger: CTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCT...GGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CAA 90 bp | TTTCACCAGTCATTTCGTGAGAAGCAGAGCACTTTGGGTCAATGTTaGCTTAGAGCTCCTAATTTGCCTGGCTTTGCTCCTCTCTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FHQSFREKQSTLGQC*LRAPNLPGFAPLSS Trigger: AGAGGAGAGAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTCACGAAATGACTGGTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATGCTCACACCCGTTGACCATGGTTGGTTaGAAAGAATTCTTTCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLCGLGRLKDSALTCSHPLTMVG*KEFFHE Trigger: CTCATGAAAGAATTCTTTCCAACCAACCATGGTCAA...CGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | AATAATGAGTCAGCAAGCTGGTTCTGCATGTTTAGAGCACTAGTTTACAAGTGTGGCTCCTGGCAGAGCTaGAAGCTGGCTGGTGCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: NNESASWFCMFRALVYKCGSWQS*KLAGAY Trigger: ATAAGCACCAGCCAGCTTCCAGCTCTGCCAGGAGCC...ACACTTGTAAACTAGTGCTCTAAACATGCAGAACCAGCTTGCTGACTCATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CAA 90 bp | GAGAAGCAGAGCACTTTGGGTCAATGTTTGCTTAGAGCTCCTAATTaGCCTGGCTTTGCTCCTCTCTCCTCTTACTCAAATCTCCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: EKQSTLGQCLLRAPN*PGFAPLSSYSNLLC Trigger: ACAAAGGAGATTTGAGTAAGAGGAGAGAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CAA 90 bp | CAGAGATGGGTATTTCACCAGTCATTTCGTGAGAAGCAGAGCACTTaGGGTCAATGTTTGCTTAGAGCTCCTAATTTGCCTGGCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QRWVFHQSFREKQST*GQCLLRAPNLPGFA Trigger: AGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTCACGAAATGACTGGTGAAATACCCATCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CAA 90 bp | TTCAGCAGTATTCAAAGTCTCTTCAGCTCTATCTACTTCATCCATTaGTCCCTTTTCTTACTAGCCTCTGCAACTGCAAGGCCCCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FSSIQSLFSSIYFIH*SLFLLASATARPLL Trigger: CAGAAGGGGCCTTGCAGTTGCAGAGGCTAGTAAGAAAAGGGACAAATGGATGAAGTAGATAGAGCTGAAGAGACTTTGAATACTGCTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR TCA 90 bp | AATAATGAGTCAGCAAGCTGGTTCTGCATGTTTAGAGCACTAGTTTACAAGTGTTCACCAGTCATTTCGTaGGAAGCAGAGCACTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NNESASWFCMFRALVYKCSPVIS*EAEHFG Trigger: CCCAAAGTGCTCTGCTTCTCACGAAATGACTGGTGA...ACACTTGTAAACTAGTGCTCTAAACATGCAGAACCAGCTTGCTGACTCATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CCA 90 bp | AATAATGAGTCAGCAAGCTGGTTCTGCATGTTTAGAGCACTAGTTTACAAGTGTGTAGAAGCAGGGCTCTaGGTTCTCTATTGCAAATAC | + |
|
Preference number: 2 (lower is better) Translates to: NNESASWFCMFRALVYKCVEAGL*VLYCKY Trigger: GTATTTGCAATAGAGAACCCAGAGCCCTGCTTCTAC...ACACTTGTAAACTAGTGCTCTAAACATGCAGAACCAGCTTGCTGACTCATTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | AGGGGCTGGCGGGAGGGCATGCCAATCTGTTCACCCTaGTGGACTGGTGAGCAGGTTCAGGACTGGGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RGWREGMPICSP*WTGEQVQDWGS Trigger: GCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCATGCCCTCCCGCCAGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | GAGCACAGCCTTTGCATGGGTTCAGGGAAGGGCTCCTaGGTGGGTCCTGACCTCAGACCTGGGAGCCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: EHSLCMGSGKGS*VGPDLRPGSHA Trigger: AGCATGGCTCCCAGGTCTGAGGTCAGGACCCACTCAGGAGCCCTTCCCTGAACCCATGCAAAGGCTGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | ACAGCCTTTGCATGGGTTCAGGGAAGGGCTCCTGAGTaGGTCCTGACCTCAGACCTGGGAGCCATGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TAFAWVQGRAPE*VLTSDLGAMLL Trigger: CAGCAGCATGGCTCCCAGGTCTGAGGTCAGGACCCACTCAGGAGCCCTTCCCTGAACCCATGCAAAGGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | TGGCCTCACTTTTACTCCGTAGGCTCCTGGCAGAGCTaGAAGCTGGCTGGTGCTTATCAGGGGGCTGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPHFYSVGSWQS*KLAGAYQGAER Trigger: CCTCTCAGCCCCCTGATAAGCACCAGCCAGCTTCCAGCTCTGCCAGGAGCCTACGGAGTAAAAGTGAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | GAGGTGAGGAGCAGGACTTTCAACCCTGAGGTGGCTTaGGCAGAAGAGGTTGGGGAAGTGGGTGGTAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EVRSRTFNPEVA*AEEVGEVGGRS Trigger: GCTCCTACCACCCACTTCCCCAACCTCTTCTGCCCAAGCCACCTCAGGGTTGAAAGTCCTGCTCCTCACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | GTAGAGAAGCCCCAGGGTCTGGCTCCAGGGTGGGTCTaGGTTAGGAATGATGTGCTGTTCCCAGGAGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VEKPQGLAPGWV*VRNDVLFPGVP Trigger: AGGGACTCCTGGGAACAGCACATCATTCCTAACTCAGACCCACCCTGGAGCCAGACCCTGGGGCTTCTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | TTCCTGTCCTGGCCTCACTTTTACTCCGTAGGCTCCTaGCAGAGCTGGAAGCTGGCTGGTGCTTATCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FLSWPHFYSVGS*QSWKLAGAYQG Trigger: CCCCTGATAAGCACCAGCCAGCTTCCAGCTCTGCCAGGAGCCTACGGAGTAAAAGTGAGGCCAGGACAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACATACCAACCAGGGTCCCGGCACTTGGCTAGTCCTGCTGAAGGCAGGCACCGGACAAGGACCATGCTaGCAAGCTTCATGTTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: THTNQGPGTWLVLLKAGTGQGPC*QASCWL Trigger: CAACCAACATGAAGCTTGCAAGCATGGTCCTTGTCC...GGTGCCTGCCTTCAGCAGGACTAGCCAAGTGCCGGGACCCTGGTTGGTATGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGGCTTTGCTTTCTTCAGGTCTCTGTGAGGTaGGGCAGCACCCAGACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PSPSWAPTTHHLTGLCFLQVSVR*GSTQTG Trigger: CCCTGTCTGGGTGCTGCCCAACCTCACAGAGACCTG...AAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | CCAGACCCTCAGGCTATGTTCCCCCTCCAGGGCAGTTaGGACCACCTCCCTATGTGGTCTAGGAAGACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PDPQAMFPLQGS*DHLPMWSRKTE Trigger: TTCAGTCTTCCTAGACCACATAGGGAGGTGGTCTCAACTGCCCTGGAGGGGGAACATAGCCTGAGGGTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | CTTTGGTCAGCCTGTGCTCTAGGCCTTTTGGCTCTGTaGTTGGCCTTGTCCCCTCCATGGACATGTCGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWSACALGLLAL*LALSPPWTCRP Trigger: AGGCCGACATGTCCATGGAGGGGACAAGGCCAATCACAGAGCCAAAAGGCCTAGAGCACAGGCTGACCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | CACCTCCCTATGTGGTCTAGGAAGACTGAAAGACTCTaGCCTCACATGCTCACACCCGTGCTCCAGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLPMWSRKTERL*PHMLTPVLQDK Trigger: CTTGTCCTGGAGCACGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | CAAGTGTCTATAGTTCAGGCAGACCCCTTCCTGTCCTaGCCTCACTTTTACTCCGTAGGCTCCTGGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QVSIVQADPFLS*PHFYSVGSWQS Trigger: GCTCTGCCAGGAGCCTACGGAGTAAAAGTGAGGCCAGGACAGGAAGGGGTCTGCCTGAACTATAGACACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | GCAGAGCTGGAAGCTGGCTGGTGCTTATCAGGGGGCTaGGAGGCTGTCTCTGTTCAGCAGTATTCAAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AELEAGWCLSGG*EAVSVQQYSKS Trigger: AGACTTTGAATACTGCTGAACAGAGACAGCCTCTCAGCCCCCTGATAAGCACCAGCCAGCTTCCAGCTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | GTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACTaGTTAGATGTGCCAGGCTGCAGCCCTGCTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VGLCHVLAKRRN*LDVPGCSPAPP Trigger: TGGAGGAGCAGGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | GTTAGGAGGGATGGCAAGGTTCTCGCTGGTCATTGCTaGTCCTGCGTGGCATGCAGAGCTAAAAGATCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VRRDGKVLAGHC*SCVACRAKRSV Trigger: CACAGATCTTTTAGCTCTGCATGCCACGCAGGAGCAGCAATGACCAGCGAGAACCTTGCCATCCCTCCTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | AGGGTTAGGAGGGATGGCAAGGTTCTCGCTGGTCATTaGTGCTCCTGCGTGGCATGCAGAGCTAAAAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: RVRRDGKVLAGH*CSCVACRAKRS Trigger: AGATCTTTTAGCTCTGCATGCCACGCAGGAGCAGCAATGACCAGCGAGAACCTTGCCATCCCTCCTAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | AGACTGAAAGACTCTGCCCTCACATGCTCACACCCGTaGTCCAGGACAAGGACCATGCTTGCAAGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: RLKDSALTCSHP*SRTRTMLASFM Trigger: CATGAAGCTTGCAAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | TGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACATaGTCACACCCGTGCTCCAGGACAAGGACCATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CGLGRLKDSALT*SHPCSRTRTML Trigger: AAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | AAGAAGGAACTGATTAGATGTGCCAGGCTGCAGCCCTaGTCCTCCATTCTCTCAGCAGCTTCCACGATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KKELIRCARLQP*SSILSAASTIA Trigger: GGCTATCGTGGAAGCTGCTGAGAGAATGGAGGAGCAGGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | GTGTGCACAGACATCTCGGTATGCTATGGTCTTCTCTaGTCCCCTCAGGTGAGAAGAGCTGTGGCTATAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VCTDISVCYGLL*SPQVRRAVAIG Trigger: ACCTATAGCCACAGCTCTTCTCACCTGAGGGGAGCAGAGAAGACCATAGCATACCGAGATGTCTGTGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | AAGGTTCTCGCTGGTCATTGCTGCTCCTGCGTGGCATaGAGAGCTAAAAGATCTGTGTGCACAGACATCTCG | + |
|
Preference number: 3 (lower is better) Translates to: KVLAGHCCSCVA*RAKRSVCTDIS Trigger: CGAGATGTCTGTGCACACAGATCTTTTAGCTCTGCATGCCACGCAGGAGCAGCAATGACCAGCGAGAACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | GTTGGAAAGAATTCTTTCATGAGCACAGCCTTTGCATaGGTTCAGGGAAGGGCTCCTGAGTGGGTCCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: VGKNSFMSTAFA*VQGRAPEWVLT Trigger: GGTCAGGACCCACTCAGGAGCCCTTCCCTGAACCCATGCAAAGGCTGTGCTCATGAAAGAATTCTTTCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | ATGGCAAGGTTCTCGCTGGTCATTGCTGCTCCTGCGTaGCATGCAGAGCTAAAAGATCTGTGTGCACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: MARFSLVIAAPA*HAELKDLCAQT Trigger: TGTCTGTGCACACAGATCTTTTAGCTCTGCATGCCACGCAGGAGCAGCAATGACCAGCGAGAACCTTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTTGGGTCAGGGTTGGGCTTTGGTGTCAGCTGAGGCTTaGATATGTCTTGTGTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: PSSWSTVFGVYLGQGWALVSAEA*ICLVCL Trigger: AAGGCACACAAGACATATCAAAGCCTCAGCTGACAC...CAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTTTACTTGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACGATAGCCAGCCACCCTaGCCATTCACCAATCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GFTWVRVGLCHVLAKRRNDSQPP*PFTNLS Trigger: AGAAAGATTGGTGAATGGCAAGGGTGGCTGGCTATC...GTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | GCAGAAGAGGTTGGGGAAGTGGGTGGTAGGAGCCTATaGTATTACTCAGATGGGCCCAGGGTATGGAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: AEEVGEVGGRSL*YYSDGPRVWSI Trigger: AATACTCCATACCCTGGGCCCATCTGAGTAATATCATAGGCTCCTACCACCCACTTCCCCAACCTCTTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | TTTCAGGTGTGGGTAGCTGGGGATAACAGAAGCAGATaGCCCAGACTGATACCCGGTGAGTGTATGCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: FQVWVAGDNRSR*PRLIPGECMPC Trigger: ACATGGCATACACTCACCGGGTATCAGTCTGGGTCATCTGCTTCTGTTATCCCCAGCTACCCACACCTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | CCAGAGATCTCATGGGCTCTGACAGTTTGGGAGACCTaGTACTCACTGGAAGTCAGGCTGACTTATGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PEISWALTVWET*YSLEVRLTYGM Trigger: CATCCCATAAGTCAGCCTGACTTCCAGTGAGTATCAGGTCTCCCAAACTGTCAGAGCCCATGAGATCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | TGCTCCTGCGTGGCATGCAGAGCTAAAAGATCTGTGTaGACAGACATCTCGGTATGCTATGGTCTTCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: CSCVACRAKRSV*TDISVCYGLLC Trigger: GCAGAGAAGACCATAGCATACCGAGATGTCTGTGCACACAGATCTTTTAGCTCTGCATGCCACGCAGGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | TCACATGCTCACACCCGTGCTCCAGGACAAGGACCATaGTTGCAAGCTTCATGTTGGTTGCTATTTAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: SHAHTRAPGQGP*LQASCWLLFST Trigger: CGTGCTAAATAGCAACCAACATGAAGCTTGCAAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | TCATGGGCTCCTACTACTCACCACCTCACAGGGCTTTaGTTTCTTCTGGACATATCCATCCTGGATAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SWAPTTHHLTGL*FLLDISILDSG Trigger: CCCACTATCCAGGATGGATATGTCCAGAAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | ATTCTCTCAGCAGCTTCCACGATAGCCAGCCACCCTTaGCATTCACCAATCTTTCTCCTTCTCCATCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILSAASTIASHP*HSPIFLLLHHG Trigger: CCCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCTATCGTGGAAGCTGCTGAGAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | CCTCAAACTGATAGAGATCCATCTGCCTCTGCCCCCTaGGTGCTGGGATTAAAGTGTGTATCACCATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQTDRDPSASAP*VLGLKCVSPCL Trigger: CAGACATGGTGATACACACTTTAATCCCAGCACCCAGGGGGCAGAGGCAGATGGATCTCTATCAGTTTGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | GAACACTTGTGGTTTGTCTCTCTGTTCTCAGAACTTTaGGCCAGCCAAGTCAGGATCCTAGCTCCTGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EHLWFVSLFSEL*ASQVRILAPGP Trigger: TGGACCAGGAGCTAGGATCCTGACTTGGCTGGCCCAAAGTTCTGAGAACAGAGAGACAAACCACAAGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGCAAGCTTCATGTTGGTaGCTATTTAGCACGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRQASCW*LFSTMP Trigger: AGGCATCGTGCTAAATAGCAACCAACATGAAGCTTG...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | TGCTCCCCTCAGGTGAGAAGAGCTGTGGCTATAGGTTaGCCATGGTTGGTTGGAAAGAATTCTTTCATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CSPQVRRAVAIG*PWLVGKNSFMS Trigger: GCTCATGAAAGAATTCTTTCCAACCAACCATGGTCAACCTATAGCCACAGCTCTTCTCACCTGAGGGGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | TGCTTTCTTCTGGACATATCCATCCTGGATAGTGGGTaGACAGAATGGGTGCTTCCAGAGATCTCATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CFLLDISILDSG*TEWVLPEISWA Trigger: AGCCCATGAGATCTCTGGAAGCACCCATTCTGTTCACCCACTATCCAGGATGGATATGTCCAGAAGAAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | CTACTTCATCCATTTGTCCCTTTTCTTACTAGCCTCTaGAACTGCAAGGCCCCTTCTGCTGGAAGACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LLHPFVPFLTSL*NCKAPSAGRQT Trigger: GGTTTGTCTTCCAGCAGAAGGGGCCTTGCAGTTGCAGAGGCTAGTAAGAAAAGGGACAAATGGATGAAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | AGGGGAGGGCTGGGATATGTTAGTCTTGATAGGAATTaGAGGGCTCATTCTATGCACAGCTTGAGGCCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RGGLGYVSLDRN*RAHSMHSLRPN Trigger: ATTAGGCCTCAAGCTGTGCATAGAATGAGCCCTGCAATTCCTATCAAGACTAACATATCCCAGCCCTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | TCACAGGGCTTTGCTTTCTTCTGGACATATCCATCCTaGATAGTGGGTGAACAGAATGGGTGCTTCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SQGFAFFWTYPS*IVGEQNGCFQR Trigger: TCTCTGGAAGCACCCATTCTGTTCACCCACTATCCAGGATGGATATGTCCAGAAGAAAGCAAAGCCCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | CCACCACAAAAGAATATGTGGTGGCCACCATTAGGATaGAAGATGAACGACACAGGACTCTGTGGATCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPQKNMWWPPLG*KMNDTGLCGSR Trigger: CCTAGATCCACAGAGTCCTGTGTCGTTCATCTTCCATCCTAATGGTGGCCACCACATATTCTTTTGTGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGCAGGGCTCTGGGTTCTCTATTGCAAATACAGAGATGGGTATTTCACCAGCTTAGAGCTCCTAATTaGCCTGGCTTTGCTCCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSRALGSLLQIQRWVFHQLRAPN*PGFAPL Trigger: GAGAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAG...CTGGTGAAATACCCATCTCTGTATTTGCAATAGAGAACCCAGAGCCCTGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGACTTTGGGTCAATGTTaGCTTAGAGCTCCTAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRTLGQC*LRAPNL Trigger: CAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGT...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | TTGATAGGAATTGCAGGGCTCATTCTATGCACAGCTTaGGGCCTAATGGTACATGGTACGTTATGCTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LIGIAGLILCTA*GLMVHGTLCCG Trigger: CCCACAGCATAACGTACCATGTACCATTAGGCCTCAAGCTGTGCATAGAATGAGCCCTGCAATTCCTATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | CATTTCGTGAGAAGCAGAGCACTTTGGGTCAATGTTTaGTTAGAGCTCCTAATTTGCCTGGCTTTGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: HFVRSRALWVNV*LELLICLALLL Trigger: GAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTCACGAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | CTACTACTCACCACCTCACAGGGCTTTGCTTTCTTCTaGACATATCCATCCTGGATAGTGGGTGAACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLLTTSQGFAFF*TYPSWIVGEQN Trigger: ATTCTGTTCACCCACTATCCAGGATGGATATGTCCAGAAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR GCA 72 bp | ACCTACGTGTCAGCTGAGGCTTTGATATGTCTTGTGTaGCTTATGATAGTCTTGAGAGTGACACAGAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TYVSAEALICLV*LMIVLRVTQRV Trigger: AACCCTCTGTGTCACTCTCAAGACTATCATAAGGCACACAAGACATATCAAAGCCTCAGCTGACACGTAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | GAGAAGAGCTGTGGCTATAGGTTGACCATGGTTGGTTaGAAAGAATTCTTTCATGAGCACAGCCTTTGCATG | + |
|
Preference number: 3 (lower is better) Translates to: EKSCGYRLTMVG*KEFFHEHSLCM Trigger: CATGCAAAGGCTGTGCTCATGAAAGAATTCTTTCCAACCAACCATGGTCAACCTATAGCCACAGCTCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | GGAGACCTGATACTCACTGGAAGTCAGGCTGACTTATaGGATGCATCTTGTCATGATGTTTGGAAACAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GDLILTGSQADL*DASCHDVWKQA Trigger: AGCTTGTTTCCAAACATCATGACAAGATGCATCCCATAAGTCAGCCTGACTTCCAGTGAGTATCAGGTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | GTAAATACCCCATGTCCACCACAAAAGAATATGTGGTaGCCACCATTAGGATGGAAGATGAACGACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VNTPCPPQKNMW*PPLGWKMNDTG Trigger: TCCTGTGTCGTTCATCTTCCATCCTAATGGTGGCCACCACATATTCTTTTGTGGTGGACATGGGGTATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | TTTACAAGTGTTTGGAGAGGGCATGCTTGTGAATTTTaGTCTAGAGGCACCTATCCTTGCATGCCTGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: FTSVWRGHACEF*SRGTYPCMPDL Trigger: AAGATCAGGCATGCAAGGATAGGTGCCTCTAGATCAAAATTCACAAGCATGCCCTCTCCAAACACTTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR CCA 72 bp | TATTTCACCAGTCATTTCGTGAGAAGCAGAGCACTTTaGGTCAATGTTTGCTTAGAGCTCCTAATTTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YFTSHFVRSRAL*VNVCLELLICL Trigger: CAGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTCACGAAATGACTGGTGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | GTTCTATACAGTAAAGCACAGTACCTACGTGTCAGCTaGGGCTTTGATATGTCTTGTGTGCCTTATGATAGT | + |
|
Preference number: 3 (lower is better) Translates to: VLYSKAQYLRVS*GFDMSCVPYDS Trigger: ACTATCATAAGGCACACAAGACATATCAAAGCCTCAGCTGACACGTAGGTACTGTGCTTTACTGTATAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| 3UTR TCA 72 bp | TTTAATTTTTACTCCCTCTCAATAGTTAGCCAGTGCTaGATGGTGCTGGTTTTGTGTCTTCTCTCTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: FNFYSLSIVSQC*MVLVLCLLSVS Trigger: GGAGACAGAGAGAAGACACAAAACCAGCACCATTCAGCACTGGCTAACTATTGAGAGGGAGTAAAAATTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR GCA 90 bp | GTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCTCGTGGAGAAGGCCTTCTaGCTGCCACCGGCGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHPDGLVSRFRTGEAWFLVEKAF*LPPAEG Trigger: GCCCTCCGCCGGTGGCAGGCAGAAGGCCTTCTCCAC...GAGGAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCAGTGGAGAAGGCCTTCTaGCTGCCACCGGCGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQSVHPDGLVSRFRTGEAVEKAF*LPPAEG Trigger: GCCCTCCGCCGGTGGCAGGCAGAAGGCCTTCTCCAC...TGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | AACACACATACCAACCAGGGTCCCGGCACTTGGCTAGTCCTGCTGAAGGCAGGCGAGCCCCAGGGAGCCTaGGAATCCTACAAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: NTHTNQGPGTWLVLLKAGEPQGA*ESYKDE Trigger: TTCATCCTTGTAGGATTCTCAGGCTCCCTGGGGCTC...GCCTGCCTTCAGCAGGACTAGCCAAGTGCCGGGACCCTGGTTGGTATGTGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | GCATGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAACATAGGCTTGTGCAGTaGGGGGCTGGCGCGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACQSVHPDGLVSRFRTGEHRLVQ*GAGAND Trigger: GTCATTCGCGCCAGCCCCTCACTGCACAAGCCTATG...TTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | CTCCCCACCAGGGCTCCCACACCCCTTACTGAGTCACTTCCCTCATCCTTGGTGAGCCTAGACGAGAAATaGAGAAGACCTTCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPTRAPTPLTESLPSSLVSLDEK*RRPSPG Trigger: CCCTGGGGAAGGTCTTCTTCATTTCTCGTCTAGGCT...CACCAAGGATGAGGGAAGTGACTCAGTAAGGGGTGTGGGAGCCCTGGTGGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCGTGGCCCCAACAAGATaGGCAGCGCCAGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SVHPDGLVSRFRTGEAWFVAPTR*AAPGGS Trigger: ACTTCCTCCTGGCGCTGCTCATCTTGTTGGGGCCAC...GAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGGTGGCCCCAACAAGATaGGCAGCGCCAGGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSVHPDGLVSRFRTGEAWVAPTR*AAPGGS Trigger: ACTTCCTCCTGGCGCTGCTCATCTTGTTGGGGCCAC...CCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCCTAGAAGGCTTAGGTaGAGCCCCAGGGAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVHPDGLVSRFRTGEAWFPRRLR*SPREPE Trigger: CTCAGGCTCCCTGGGGCTCCACCTAAGCCTTCTAGG...GAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTGGTGCTTATCAGGGGGCTGAGAGGCTGTCTCTGTTCAGCAGTATTCAACATAGGCTTGTGCAGTaGGGGGCTGGCGCGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGAYQGAERLSLFSSIQHRLVQ*GAGAND Trigger: GTCATTCGCGCCAGCCCCTCACTGCACAAGCCTATG...TTGAATACTGCTGAACAGAGACAGCCTCTCAGCCCCCTGATAAGCACCAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGGGGCCATGCAGCCTGTaGAGGAGATGTGCTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSVHPDGLVSRFRTGEAWGPCSL*RRCAGT Trigger: AGTTCCAGCACATCTCCTTCACAGGCTGCATGGCCC...CCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTCCCCAGGGAAATGGTaGAGCCAGACAACCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSVHPDGLVSRFRTGEAWSPGKW*SQTTRS Trigger: GCTCCTGGTTGTCTGGCTTCACCATTTCCCTGGGGA...CCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | GTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCTCCAGAGCAGGCAAGGTTaGGTAGTGGGGACACATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHPDGLVSRFRTGEAWFLQSRQG*VVGTHH Trigger: GTGATGTGTCCCCACTACTCAACCTTGCCTGCTCTG...GAGGAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | GCATGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGAGCCCCAGGGAGCCTaGGAATCCTACAAGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACQSVHPDGLVSRFRTGEEPQGA*ESYKDE Trigger: TTCATCCTTGTAGGATTCTCAGGCTCCCTGGGGCTC...TTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGACCACCTCCCTATGTGGTCTAGGAAGACTGAAAGACTCTGCCCTCACACCTAGAAGGCTTAGGTaGAGCCCCAGGGAGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VETTSLCGLGRLKDSALTPRRLR*SPREPE Trigger: CTCAGGCTCCCTGGGGCTCCACCTAAGCCTTCTAGG...TGTGAGGGCAGAGTCTTTCAGTCTTCCTAGACCACATAGGGAGGTGGTCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR CCA 90 bp | GTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCTCGACAGTCAACAGCAGTaGCCCCAACAAGATGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHPDGLVSRFRTGEAWFLDSQQQ*PQQDEQ Trigger: CTGCTCATCTTGTTGGGGCCACTGCTGTTGACTGTC...GAGGAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| 3UTR CAA 72 bp | AGCCAAGTCAGGATCCTAGCTCCTGGTCCACTGTGTTaGGGGTTTACTTGGGTCAGGGTTGGGCTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQVRILAPGPLC*GFTWVRVGLCH Trigger: GTGGCAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGGATCCTGACTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTTACTTGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAAAAGAAGGAACTCCCCAGGGAAATGGTaGAGCCAGACAACCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFTWVRVGLCHVLAKRRNSPGKW*SQTTRS Trigger: GCTCCTGGTTGTCTGGCTTCACCATTTCCCTGGGGA...GTTCCTTCTTTTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCAAGCCTAGACGAGAAATaGAGAAGACCTTCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQSVHPDGLVSRFRTGEASLDEK*RRPSPG Trigger: CCCTGGGGAAGGTCTTCTTCATTTCTCGTCTAGGCT...TGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | GTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCTCTACAAGCTCTGCAACTaGCATGTCAGAGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHPDGLVSRFRTGEAWFLYKLCN*HVRAGK Trigger: CTTGCCTGCTCTGACATGTCAGTTGCAGAGCTTGTA...GAGGAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR TCA 90 bp | TGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCAGGGGCCGGGCATAGATaGAGAGAGAAGCTGAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQSVHPDGLVSRFRTGEAGAGHR*REKLNR Trigger: TCTATTCAGCTTCTCTCTTCATCTATGCCCGGCCCC...TGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR GCA 90 bp | CAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGCCTGTGAAGGAGATGTaGTGGAACTTGGGAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QSVHPDGLVSRFRTGEAWPVKEM*WNLGET Trigger: GGTCTCTCCCAAGTTCCAGCACATCTCCTTCACAGG...CCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCAGTGAAGGAGATGTGCTaGAACTTGGGAGAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CQSVHPDGLVSRFRTGEAVKEMC*NLGETR Trigger: CCTGGTCTCTCCCAAGTTCCAGCACATCTCCTTCAC...TGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS-3UTR CCA 90 bp | TCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCGTGAAGGAGATGTGCTaGAACTTGGGAGAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SVHPDGLVSRFRTGEAWFVKEMC*NLGETR Trigger: CCTGGTCTCTCCCAAGTTCCAGCACATCTCCTTCAC...GAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | GATCCTAGCTCCTGGTCCACTGTGTTTGGGGTTTACTaGGGTCAGGGTTGGGCTTTGCCACGTTCTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: DPSSWSTVFGVY*GQGWALPRSGK Trigger: TTTGCCAGAACGTGGCAAAGCCCAACCCTGACCCAAGTAAACCCCAAACACAGTGGACCAGGAGCTAGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | TGTCCCCTCCATGGACATGTCGGCCTCTATACTCAGTaGTACTGCTGCACAAACACCTGTCCATCCCCGATA | + |
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Preference number: 4 (lower is better) Translates to: CPLHGHVGLYTQ*YCCTNTCPSPI Trigger: TATCGGGGATGGACAGGTGTTTGTGCAGCAGTACAACTGAGTATAGAGGCCGACATGTCCATGGAGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR TCA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGGGGGCCGGGCATAGATaGAGAGAGAAGCTGAATAGA | + |
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Preference number: 4 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRGAGHR*REKLNR Trigger: TCTATTCAGCTTCTCTCTTCATCTATGCCCGGCCCC...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR GCA 90 bp | TTGCCACGTTCTGGCAAAAAGAAGGAACTGATTAGATGTGCCAGGCTGCAGCCCCCTGTGAAGGAGATGTaGTGGAACTTGGGAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LPRSGKKKELIRCARLQPPVKEM*WNLGET Trigger: GGTCTCTCCCAAGTTCCAGCACATCTCCTTCACAGG...GGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR TCA 90 bp | GGGCTGAGAGGCTGTCTCTGTTCAGCAGTATTCAAAGTCTCTTCAGCTCTATCTCAGAGCAGGCAAGGTTaGGTAGTGGGGACACATCAC | + |
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Preference number: 4 (lower is better) Translates to: GLRGCLCSAVFKVSSALSQSRQG*VVGTHH Trigger: GTGATGTGTCCCCACTACTCAACCTTGCCTGCTCTG...AGATAGAGCTGAAGAGACTTTGAATACTGCTGAACAGAGACAGCCTCTCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR TCA 90 bp | CACCAATCTTTCTCCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGTACAAGCTCTGCAACTaGCATGTCAGAGCAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HQSFSFSIMGSYYSPPHRYKLCN*HVRAGK Trigger: CTTGCCTGCTCTGACATGTCAGTTGCAGAGCTTGTA...CCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGGAGAAAGATTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR TCA 90 bp | GCATGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGATGAAGAGAGAAGCTaGATAGAAGATGACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: ACQSVHPDGLVSRFRTGEDEERS*IEDDHH Trigger: GTGGTGGTCATCTTCTATTCAGCTTCTCTCTTCATC...TTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | CATGCTCACACCCGTGCTCCAGGACAAGGACCATGCTaGCAAGCTTCATGTTGGTTGCTATTTAGCACGATG | + |
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Preference number: 4 (lower is better) Translates to: HAHTRAPGQGPC*QASCWLLFSTM Trigger: CATCGTGCTAAATAGCAACCAACATGAAGCTTGCAAGCATGGTCCTTGTCCTGGAGCACGGGTGTGAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | AGCTCTGGGTTGCCTGATTCTCAGGTCTCTGTGAGGTaGGGCAGCACCCAGACAGGGCTGATATTTCATATA | + |
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Preference number: 4 (lower is better) Translates to: SSGLPDSQVSVR*GSTQTGLIFHI Trigger: TATATGAAATATCAGCCCTGTCTGGGTGCTGCCCAACCTCACAGAGACCTGAGAATCAGGCAACCCAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | CATTCTCTCAGCAGCTTCCACGATAGCCAGCCACCCTaGCCATTCACCAATCTTTCTCCTTCTCCATCATGG | + |
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Preference number: 4 (lower is better) Translates to: HSLSSFHDSQPP*PFTNLSPSPSW Trigger: CCATGATGGAGAAGGAGAAAGATTGGTGAATGGCAAGGGTGGCTGGCTATCGTGGAAGCTGCTGAGAGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | AGAACACTTGTGGTTTGTCTCTCTGTTCTCAGAACTTaGGGCCAGCCAAGTCAGGATCCTAGCTCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RTLVVCLSVLRT*GQPSQDPSSWS Trigger: GGACCAGGAGCTAGGATCCTGACTTGGCTGGCCCAAAGTTCTGAGAACAGAGAGACAAACCACAAGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR TCA 90 bp | CCTTCTCCATCATGGGCTCCTACTACTCACCACCTCACAGGGCTTTGCTTTCTTGATGAAGAGAGAAGCTaGATAGAAGATGACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: PSPSWAPTTHHLTGLCFLDEERS*IEDDHH Trigger: GTGGTGGTCATCTTCTATTCAGCTTCTCTCTTCATC...AAGAAAGCAAAGCCCTGTGAGGTGGTGAGTAGTAGGAGCCCATGATGGAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | CTGCTCCCCTCAGGTGAGAAGAGCTGTGGCTATAGGTaGACCATGGTTGGTTGGAAAGAATTCTTTCATGAG | + |
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Preference number: 4 (lower is better) Translates to: LLPSGEKSCGYR*TMVGWKEFFHE Trigger: CTCATGAAAGAATTCTTTCCAACCAACCATGGTCAACCTATAGCCACAGCTCTTCTCACCTGAGGGGAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | AAAGGACAGAATCTTGTAGCAGAGAACACTTGTGGTTaGTCTCTCTGTTCTCAGAACTTTGGGCCAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: KGQNLVAENTCG*SLCSQNFGPAK Trigger: CTTGGCTGGCCCAAAGTTCTGAGAACAGAGAGACAAACCACAAGTGTTCTCTGCTACAAGATTCTGTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | CCAGGACAAGGACCATGCTTGCAAGCTTCATGTTGGTaGCTATTTAGCACGATGCCTGTTCTATACAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: PGQGPCLQASCW*LFSTMPVLYSK Trigger: TTTACTGTATAGAACAGGCATCGTGCTAAATAGCAACCAACATGAAGCTTGCAAGCATGGTCCTTGTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | GTCAATGTTTGCTTAGAGCTCCTAATTTGCCTGGCTTaGCTCCTCTCTCCTCTTACTCAAATCTCCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: VNVCLELLICLA*LLSPLTQISFV Trigger: TACAAAGGAGATTTGAGTAAGAGGAGAGAGGAGCAAAGCCAGGCAAATTAGGAGCTCTAAGCAAACATTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| 3UTR CAA 72 bp | GTATTTCACCAGTCATTTCGTGAGAAGCAGAGCACTTaGGGTCAATGTTTGCTTAGAGCTCCTAATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: VFHQSFREKQST*GQCLLRAPNLP Trigger: AGGCAAATTAGGAGCTCTAAGCAAACATTGACCCAAAGTGCTCTGCTTCTCACGAAATGACTGGTGAAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS TCA 90 bp | AGGCCTTCTGCCTGCCACCGGCGGAGGGCATGCGTAGCACGGTGCTaGGAATGGCCGTGTAGGAGAAGACAGTCAACAGCAGTGGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: RPSACHRRRACVARC*EWPCRRRQSTAVAP Trigger: TGGGGCCACTGCTGTTGACTGTCTTCTCCTACACGGCCATTCTCAGCACCGTGCTACGCATGCCCTCCGCCGGTGGCAGGCAGAAGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS-3UTR CAA 90 bp | GTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATGGTTCCTCGAGATGTGCTGGAACTaGGGAGAGACCAGGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: VHPDGLVSRFRTGEAWFLEMCWN*GETRLS Trigger: GCTCAGCCTGGTCTCTCCCAAGTTCCAGCACATCTC...GAGGAACCATGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS-3UTR CAA 90 bp | GCATGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAAAGAGGTACATAGGCTaGTGCAGTGAGGGGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: ACQSVHPDGLVSRFRTGEKRYIG*CSEGLA Trigger: CGCCAGCCCCTCACTGCACAAGCCTATGTACCTCTT...TTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS TCA 90 bp | TGGCCGTGTAGGAGAAGACAGTCAACAGCAGTGGCCCCAACAAGATaGGCAGCGCCAGGAGGAAGTCTACAAGCTCTGCAACTGACATGT | + |
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Preference number: 5 (lower is better) Translates to: WPCRRRQSTAVAPTR*AAPGGSLQALQLTC Trigger: ACATGTCAGTTGCAGAGCTTGTAGACTTCCTCCTGGCGCTGCTCATCTTGTTGGGGCCACTGCTGTTGACTGTCTTCTCCTACACGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS-3UTR CAA 90 bp | TTGCCACGTTCTGGCAAAAAGAAGGAACTGATTAGATGTGCCAGGCTGCAGCCCAAGAGGTACATAGGCTaGTGCAGTGAGGGGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: LPRSGKKKELIRCARLQPKRYIG*CSEGLA Trigger: CGCCAGCCCCTCACTGCACAAGCCTATGTACCTCTT...GGGCTGCAGCCTGGCACATCTAATCAGTTCCTTCTTTTTGCCAGAACGTGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS-3UTR CAA 90 bp | TGCCAATCTGTTCACCCTGATGGACTGGTGAGCAGGTTCAGGACTGGGGAAGCATTATGTAGCGCTTGCTaGACCTCTTGGTTCCGAAGG | + |
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Preference number: 5 (lower is better) Translates to: CQSVHPDGLVSRFRTGEALCSAC*TSWFRR Trigger: CCTTCGGAACCAAGAGGTCAAGCAAGCGCTACATAA...TGCTTCCCCAGTCCTGAACCTGCTCACCAGTCCATCAGGGTGAACAGATTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS-3UTR CAA 90 bp | AATAATGAGTCAGCAAGCTGGTTCTGCATGTTTAGAGCACTAGTTTACAAGTGTGAGATGTGCTGGAACTaGGGAGAGACCAGGCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NNESASWFCMFRALVYKCEMCWN*GETRLS Trigger: GCTCAGCCTGGTCTCTCCCAAGTTCCAGCACATCTC...ACACTTGTAAACTAGTGCTCTAAACATGCAGAACCAGCTTGCTGACTCATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215815.2 |
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| CDS TCA 72 bp | GCCTGCCACCGGCGGAGGGCATGCGTAGCACGGTGCTaGGAATGGCCGTGTAGGAGAAGACAGTCAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: ACHRRRACVARC*EWPCRRRQSTA Trigger: TGCTGTTGACTGTCTTCTCCTACACGGCCATTCTCAGCACCGTGCTACGCATGCCCTCCGCCGGTGGCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS CCA 72 bp | GAGAATGGCCGTGTAGGAGAAGACAGTCAACAGCAGTaGCCCCAACAAGATGAGCAGCGCCAGGAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ENGRVGEDSQQQ*PQQDEQRQEEV Trigger: GACTTCCTCCTGGCGCTGCTCATCTTGTTGGGGCCACTGCTGTTGACTGTCTTCTCCTACACGGCCATTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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| CDS TCA 72 bp | AGGAGAAGACAGTCAACAGCAGTGGCCCCAACAAGATaGGCAGCGCCAGGAGGAAGTCTACAAGCTCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: RRRQSTAVAPTR*AAPGGSLQALQ Trigger: TTGCAGAGCTTGTAGACTTCCTCCTGGCGCTGCTCATCTTGTTGGGGCCACTGCTGTTGACTGTCTTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051943.6 ENSMUST00000215815.2 |
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