Pregenerated sensors for OLFR523 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051051Ensembl transcript IDs: ENSMUST00000055890.6, ENSMUST00000209314.3, ENSMUST00000213953.2, ENSMUST00000214272.2, ENSMUST00000215785.2, ENSMUST00000216023.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTaGAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAA | + |
Preference number: 1 (lower is better) Translates to: GGWHLHLWPIPGRGH*REELLCPTWDSTLE Trigger: TTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 90 bp | CGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTaGCATTTGGGAGGTAGAGGCAGGAGGGTCACAAGCTCAAGGTCA | + |
Preference number: 1 (lower is better) Translates to: RSPGFHPQNHKTEHQ*HLGGRGRRVTSSRS Trigger: TGACCTTGAGCTTGTGACCCTCCTGCCTCTACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 90 bp | CAGCAGAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTaGGGGTCAGCACTTCCTCTGGCTCCAGACCTTGGGAGAAGAGGA | + |
Preference number: 1 (lower is better) Translates to: QQRRLSVQIQLSVQA*GSALPLAPDLGRRG Trigger: TCCTCTTCTCCCAAGGTCTGGAGCCAGAGGAAGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 90 bp | CTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTTaGGAGGTAGAGGCAGGAGGGTCACAAGCTCAAGGTCACTCTCAG | + |
Preference number: 1 (lower is better) Translates to: LASIPRTTKQSISAI*EVEAGGSQAQGHSQ Trigger: CTGAGAGTGACCTTGAGCTTGTGACCCTCCTGCCTCTACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 90 bp | TCCACTCCCTACAGACAAAGACCCAGAAATGCAGTAGATACACCTTaGGACCCTAGTGCAAGCCCAGCAAGCCCTTGCAGGACCTCAGCT | + |
Preference number: 1 (lower is better) Translates to: STPYRQRPRNAVDTP*DPSASPASPCRTSA Trigger: AGCTGAGGTCCTGCAAGGGCTTGCTGGGCTTGCACTAGGGTCTCAAGGTGTATCTACTGCATTTCTGGGTCTTTGTCTGTAGGGAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 90 bp | GCCCAGCAAGCCCTTGCAGGACCTCAGCTTCCTCTGAGCCTTCTGTaGTTGTTTGTTTGTTTGCTTGCTTGCTTGCTTGCTTGCTTGCTT | + |
Preference number: 1 (lower is better) Translates to: AQQALAGPQLPLSLL*LFVCLLACLLACLL Trigger: AAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 90 bp | GACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTaGAACTGGGGGCTGGAACAACAAGCACTCCTGAACAAAGCCATA | + |
Preference number: 1 (lower is better) Translates to: DLLGTQNPVSLLVSS*NWGLEQQALLNKAI Trigger: TATGGCTTTGTTCAGGAGTGCTTGTTGTTCCAGCCCCCAGTTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 90 bp | GTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTaGAAGACGGTAAAGAGAAAAGTCCGAGTGGATCATCTAGGCCTC | + |
Preference number: 1 (lower is better) Translates to: VTAERSFYVLLGIPL*KTVKRKVRVDHLGL Trigger: GAGGCCTAGATGATCCACTCGGACTTTTCTCTTTACCGTCTTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 90 bp | TACTCTCCAGGTTTCCTTGAGACGGTACTGTCATGGTTACGTTTATaGATGAAGAAACAGGTTCGGTGTAGTGATGCTCTGTTTACCCCC | + |
Preference number: 1 (lower is better) Translates to: YSPGFLETVLSWLRL*MKKQVRCSDALFTP Trigger: GGGGGTAAACAGAGCATCACTACACCGAACCTGTTTCTTCATCCATAAACGTAACCATGACAGTACCGTCTCAAGGAAACCTGGAGAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 90 bp | ACCTCAGCTTCCTCTGAGCCTTCTGTGCTTGTTTGTTTGTTTGCTTaGTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGTTTTTCACCAT | + |
Preference number: 1 (lower is better) Translates to: TSASSEPSVLVCLFA*LLACLLACLLVFHH Trigger: ATGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 90 bp | CAGCTTCCTCTGAGCCTTCTGTGCTTGTTTGTTTGTTTGCTTGCTTaGTTGCTTGCTTGCTTGCTTGCTTGCTTGTTTTTCACCATGATT | + |
Preference number: 1 (lower is better) Translates to: QLPLSLLCLFVCLLA*LLACLLACLFFTMI Trigger: AATCATGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 90 bp | TGCACTTTAATTCACCATTTGGAAAGTAACCACAAAAACAGAGTATaGAAGTTCCAGCAGCAGAGACGGCTGAGTGTACAAATTCAGTTG | + |
Preference number: 1 (lower is better) Translates to: CTLIHHLESNHKNRV*KFQQQRRLSVQIQL Trigger: CAACTGAATTTGTACACTCAGCCGTCTCTGCTGCTGGAACTTGCATACTCTGTTTTTGTGGTTACTTTCCAAATGGTGAATTAAAGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCCCACAGGCCAGCCAATaGCAGTCCTGCAGAGCAGCC | + |
Preference number: 2 (lower is better) Translates to: GELQPESEATQASRAPAPPQASQ*QSCRAA Trigger: GGCTGCTCTGCAGGACTGTCATTGGCTGGCCTGTGG...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCGGCCCCCGCTCCCTCTaGTCCCTTCCTGTACCTCCA | + |
Preference number: 2 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCGPRSL*SLPVPP Trigger: TGGAGGTACAGGAAGGGATCAGAGGGAGCGGGGGCC...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCGACCCCCTGATGGCCTaGCATGTCCTTCCTGGAGAT | + |
Preference number: 2 (lower is better) Translates to: GELQPESEATQASRAPAPDPLMA*HVLPGD Trigger: ATCTCCAGGAAGGACATGCCAGGCCATCAGGGGGTC...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GCCACAGAGGTTAGGACACAGGAGCCAGGAAAGTGTGAAAGCAGTCAGCCTGTGGGAGTCCAGTTGCTCTaGGGTCCCCGGGGACTGAGA | + |
Preference number: 2 (lower is better) Translates to: ATEVRTQEPGKCESSQPVGVQLL*GPRGLR Trigger: TCTCAGTCCCCGGGGACCCCAGAGCAACTGGACTCC...CACAGGCTGACTGCTTTCACACTTTCCTGGCTCCTGTGTCCTAACCTCTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCGGAGCCAGGAAAGTGTaGAAGCAGTCAGCCTGTGGT | + |
Preference number: 2 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCGARKV*KQSACG Trigger: ACCACAGGCTGACTGCTTTCACACTTTCCTGGCTCC...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CCTTGGGAGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCGACCCCCTGATGGCCTaGCATGTCCTTCCTGGAGAT | + |
Preference number: 2 (lower is better) Translates to: PWEKRNSRWVASSPVAHPDPLMA*HVLPGD Trigger: ATCTCCAGGAAGGACATGCCAGGCCATCAGGGGGTC...GGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCTCCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR GCA 90 bp | GCCACAGAGGTTAGGACACAGGAGCCAGGAAAGTGTGAAAGCAGTCAGCCTGTGAGCCCAGCAAGCCCTTaGAGGACCTCAGCTTCCTCT | + |
Preference number: 2 (lower is better) Translates to: ATEVRTQEPGKCESSQPVSPASP*RTSASS Trigger: AGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGCT...CACAGGCTGACTGCTTTCACACTTTCCTGGCTCCTGTGTCCTAACCTCTGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCCTGGCATGTCCTTCCTaGAGATTCCAGGTATGGCTT | + |
Preference number: 2 (lower is better) Translates to: GELQPESEATQASRAPAPLACPS*RFQVWL Trigger: AAGCCATACCTGGAATCTCCAGGAAGGACATGCCAG...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CCTTGGGAGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCGCATTCACGAAGCCCTaGCTTCCATCCCCAGAACCA | + |
Preference number: 2 (lower is better) Translates to: PWEKRNSRWVASSPVAHPAFTKP*LPSPEP Trigger: TGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGC...GGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCTCCCAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | AAAGTCCGAGTGGATCATCTAGGCCTCAGACATGGGCTGGACAGAACAGAGAAGGGAGTCCAGTTGCTCTaGGGTCCCCGGGGACTGAGA | + |
Preference number: 2 (lower is better) Translates to: KVRVDHLGLRHGLDRTEKGVQLL*GPRGLR Trigger: TCTCAGTCCCCGGGGACCCCAGAGCAACTGGACTCC...CTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTGGAGTCCAGTTGCTCTaGGGTCCCCGGGGACTGAGA | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTGVQLL*GPRGLR Trigger: TCTCAGTCCCCGGGGACCCCAGAGCAACTGGACTCC...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCCTCTCCAGGTTTCCTTaGGACGGTACTGTCATGGTT | + |
Preference number: 2 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCLSRFP*DGTVMV Trigger: AACCATGACAGTACCGTCTCAAGGAAACCTGGAGAG...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCCTCTCCAGGTTTCCTTaGGACGGTACTGTCATGGTT | + |
Preference number: 2 (lower is better) Translates to: AQSAERMFSIHEALASIPLSRFP*DGTVMV Trigger: AACCATGACAGTACCGTCTCAAGGAAACCTGGAGAG...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CTGATGGCCTGGCATGTCCTTCCTGGAGATTCCAGGTATGGCTTGGTGACATCCGGGTCTGGCCAGAACTaGCGCACAGCTTCTGGTATT | + |
Preference number: 2 (lower is better) Translates to: LMAWHVLPGDSRYGLVTSGSGQN*RTASGI Trigger: AATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCC...GGATGTCACCAAGCCATACCTGGAATCTCCAGGAAGGACATGCCAGGCCATCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCCTGGCATGTCCTTCCTaGAGATTCCAGGTATGGCTT | + |
Preference number: 2 (lower is better) Translates to: AQSAERMFSIHEALASIPLACPS*RFQVWL Trigger: AAGCCATACCTGGAATCTCCAGGAAGGACATGCCAG...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GGTCCCCGGGGACTGAGAGATCAGGGTGGACACAGGCACTATTGGTTGTCCAGACTGGCATGTCCTTCCTaGAGATTCCAGGTATGGCTT | + |
Preference number: 2 (lower is better) Translates to: GPRGLRDQGGHRHYWLSRLACPS*RFQVWL Trigger: AAGCCATACCTGGAATCTCCAGGAAGGACATGCCAG...TCTGGACAACCAATAGTGCCTGTGTCCACCCTGATCTCTCAGTCCCCGGGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CAA 90 bp | CCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTaGGGAGGTAGAGGCAGGAGGGTCACAAGCTCAAGGTCACTCTCA | + |
Preference number: 2 (lower is better) Translates to: PGFHPQNHKTEHQCH*GGRGRRVTSSRSLS Trigger: TGAGAGTGACCTTGAGCTTGTGACCCTCCTGCCTCTACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | AGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGACCTCAGCTTCCTCTaGGCCTTCTGTGCTTGTTTG | + |
Preference number: 2 (lower is better) Translates to: RRGILGGWHLHLWPIPGRDLSFL*AFCACL Trigger: CAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTC...CCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | CCTTGGGAGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCCTCTCCAGGTTTCCTTaGGACGGTACTGTCATGGTT | + |
Preference number: 2 (lower is better) Translates to: PWEKRNSRWVASSPVAHPLSRFP*DGTVMV Trigger: AACCATGACAGTACCGTCTCAAGGAAACCTGGAGAG...GGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCTCCCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR GCA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATAGCCCAGCAAGCCCTTaGAGGACCTCAGCTTCCTCT | + |
Preference number: 2 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHSPASP*RTSASS Trigger: AGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGCT...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR GCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTAGCCCAGCAAGCCCTTaGAGGACCTCAGCTTCCTCT | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTSPASP*RTSASS Trigger: AGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGCT...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR GCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCAAAACAGAGCATCAGTaGCATTTGGGAGGTAGAGGC | + |
Preference number: 2 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCKTEHQ*HLGGRG Trigger: GCCTCTACCTCCCAAATGGCACTGATGCTCTGTTTT...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGGCCTCAGACATGGGCTaGACAGAACAGAGAAGCCAC | + |
Preference number: 2 (lower is better) Translates to: VGVTAERSFYVLLGIPLWASDMG*TEQRSH Trigger: GTGGCTTCTCTGTTCTGTCCAGCCCATGTCTGAGGC...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTGGAGCCAGGAAAGTGTaGAAGCAGTCAGCCTGTGGT | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTGARKV*KQSACG Trigger: ACCACAGGCTGACTGCTTTCACACTTTCCTGGCTCC...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | CACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAAGACGGTGGAGCCAGGAAAGTGTaGAAGCAGTCAGCCTGTGGT | + |
Preference number: 2 (lower is better) Translates to: HCREELLCPTWDSTLEDGGARKV*KQSACG Trigger: ACCACAGGCTGACTGCTTTCACACTTTCCTGGCTCC...ACCGTCTTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATGGGTCTGGCCAGAACTaGCGCACAGCTTCTGGTATT | + |
Preference number: 2 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHGSGQN*RTASGI Trigger: AATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCC...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | AAAGTCCGAGTGGATCATCTAGGCCTCAGACATGGGCTGGACAGAACAGAGAAGGGGTCTGGCCAGAACTaGCGCACAGCTTCTGGTATT | + |
Preference number: 2 (lower is better) Translates to: KVRVDHLGLRHGLDRTEKGSGQN*RTASGI Trigger: AATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCC...CTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CCA 90 bp | AGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGCTGGCATGTCCTTCCTaGAGATTCCAGGTATGGCTT | + |
Preference number: 2 (lower is better) Translates to: RRGILGGWHLHLWPIPGRLACPS*RFQVWL Trigger: AAGCCATACCTGGAATCTCCAGGAAGGACATGCCAG...CCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTGCATTCACGAAGCCCTaGCTTCCATCCCCAGAACCA | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTAFTKP*LPSPEP Trigger: TGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGC...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR TCA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATGACCTCAGCTTCCTCTaGGCCTTCTGTGCTTGTTTG | + |
Preference number: 2 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHDLSFL*AFCACL Trigger: CAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTC...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR TCA 90 bp | CACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAAGACGGTGACCTCAGCTTCCTCTaGGCCTTCTGTGCTTGTTTG | + |
Preference number: 2 (lower is better) Translates to: HCREELLCPTWDSTLEDGDLSFL*AFCACL Trigger: CAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTC...ACCGTCTTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR TCA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCGGTTACGTTTATGGATaGAGAAACAGGTTCGGTGTA | + |
Preference number: 2 (lower is better) Translates to: AQSAERMFSIHEALASIPGYVYG*RNRFGV Trigger: TACACCGAACCTGTTTCTTCATCCATAAACGTAACC...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR TCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCGGTTACGTTTATGGATaGAGAAACAGGTTCGGTGTA | + |
Preference number: 2 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCGYVYG*RNRFGV Trigger: TACACCGAACCTGTTTCTTCATCCATAAACGTAACC...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR GCA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCACAAAGACCCAGAAATaGAGTAGATACACCTTGAGA | + |
Preference number: 2 (lower is better) Translates to: GELQPESEATQASRAPAPTKTQK*SRYTLR Trigger: TCTCAAGGTGTATCTACTGCATTTCTGGGTCTTTGT...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR GCA 90 bp | GCCACAGAGGTTAGGACACAGGAGCCAGGAAAGTGTGAAAGCAGTCAGCCTGTGAAAACAGAGCATCAGTaGCATTTGGGAGGTAGAGGC | + |
Preference number: 2 (lower is better) Translates to: ATEVRTQEPGKCESSQPVKTEHQ*HLGGRG Trigger: GCCTCTACCTCCCAAATGGCACTGATGCTCTGTTTT...CACAGGCTGACTGCTTTCACACTTTCCTGGCTCCTGTGTCCTAACCTCTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR CAA 90 bp | CAGCAAGCCCTTGCAGGACCTCAGCTTCCTCTGAGCCTTCTGTGCTaGTTTGTTTGTTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCT | + |
Preference number: 2 (lower is better) Translates to: QQALAGPQLPLSLLC*FVCLLACLLACLLA Trigger: AGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | CACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAAGACGGTCTCTCCAGGTTTCCTTaGGACGGTACTGTCATGGTT | + |
Preference number: 2 (lower is better) Translates to: HCREELLCPTWDSTLEDGLSRFP*DGTVMV Trigger: AACCATGACAGTACCGTCTCAAGGAAACCTGGAGAG...ACCGTCTTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR TCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTGGCCTCTCCAAATCCTaGCAGCCAACCACTTATTCT | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTGLSKS*QPTTYS Trigger: AGAATAAGTGGTTGGCTGTCAGGATTTGGAGAGGCC...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR GCA 90 bp | AGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGTCAAAAAGCCCAAAGTaGAAACTCTCTCAGAGCCAC | + |
Preference number: 2 (lower is better) Translates to: RRGILGGWHLHLWPIPGRSKSPK*KLSQSH Trigger: GTGGCTCTGAGAGAGTTTGCACTTTGGGCTTTTTGA...CCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTCTTCTAGTATCTTCCTaGAACTGGGGGCTGGAACAA | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTLLVSS*NWGLEQ Trigger: TTGTTCCAGCCCCCAGTTCCAGGAAGATACTAGAAG...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CCA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCTTCTAGTATCTTCCTaGAACTGGGGGCTGGAACAA | + |
Preference number: 2 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHLLVSS*NWGLEQ Trigger: TTGTTCCAGCCCCCAGTTCCAGGAAGATACTAGAAG...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CTGATGGCCTGGCATGTCCTTCCTGGAGATTCCAGGTATGGCTTGGTGACATCCCTGGCGCACAGCTTCTaGTATTTATATTGGAGGTTT | + |
Preference number: 2 (lower is better) Translates to: LMAWHVLPGDSRYGLVTSLAHSF*YLYWRF Trigger: AAACCTCCAATATAAATACCAGAAGCTGTGCGCCAG...GGATGTCACCAAGCCATACCTGGAATCTCCAGGAAGGACATGCCAGGCCATCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | TGCTTGCTTGCTTGCTTGTTTTTCACCATGATTAACCTCTGTGAGCATGGACCCGGGTCTGGCCAGAACTaGCGCACAGCTTCTGGTATT | + |
Preference number: 2 (lower is better) Translates to: CLLACLFFTMINLCEHGPGSGQN*RTASGI Trigger: AATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCC...GGGTCCATGCTCACAGAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | AGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGACAAGAGACACTCTaGCAACAATTCTCAAAAAGC | + |
Preference number: 2 (lower is better) Translates to: RRGILGGWHLHLWPIPGRGQETL*QQFSKS Trigger: GCTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCC...CCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR TCA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGGGTTACGTTTATGGATaGAGAAACAGGTTCGGTGTA | + |
Preference number: 2 (lower is better) Translates to: VGVTAERSFYVLLGIPLWGYVYG*RNRFGV Trigger: TACACCGAACCTGTTTCTTCATCCATAAACGTAACC...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTTGGGAGGTCTGGCGCACAGCTTCTaGTATTTATATTGGAGGTTT | + |
Preference number: 2 (lower is better) Translates to: PGFHPQNHKTEHQCHLGGLAHSF*YLYWRF Trigger: AAACCTCCAATATAAATACCAGAAGCTGTGCGCCAG...ACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGCTGGCGCACAGCTTCTaGTATTTATATTGGAGGTTT | + |
Preference number: 2 (lower is better) Translates to: VGVTAERSFYVLLGIPLWLAHSF*YLYWRF Trigger: AAACCTCCAATATAAATACCAGAAGCTGTGCGCCAG...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | AGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGTCATGGTTACGTTTATaGATGAAGAAACAGGTTCGG | + |
Preference number: 2 (lower is better) Translates to: RRGILGGWHLHLWPIPGRSWLRL*MKKQVR Trigger: CCGAACCTGTTTCTTCATCCATAAACGTAACCATGA...CCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | TGCTTGCTTGCTTGCTTGTTTTTCACCATGATTAACCTCTGTGAGCATGGACCCGTATCTTCCTGGAACTaGGGGCTGGAACAACAAGCA | + |
Preference number: 2 (lower is better) Translates to: CLLACLFFTMINLCEHGPVSSWN*GLEQQA Trigger: TGCTTGTTGTTCCAGCCCCCAGTTCCAGGAAGATAC...GGGTCCATGCTCACAGAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTTGGGAGGTTCATGGTTACGTTTATaGATGAAGAAACAGGTTCGG | + |
Preference number: 2 (lower is better) Translates to: PGFHPQNHKTEHQCHLGGSWLRL*MKKQVR Trigger: CCGAACCTGTTTCTTCATCCATAAACGTAACCATGA...ACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTCTTGGGATTCCACTCTaGAAGACGGTAAAGAGAAAA | + |
Preference number: 2 (lower is better) Translates to: ETAECTNSVECASLRVSTLGIPL*KTVKRK Trigger: TTTTCTCTTTACCGTCTTCCAGAGTGGAATCCCAAG...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR GCA 90 bp | AAAGTCCGAGTGGATCATCTAGGCCTCAGACATGGGCTGGACAGAACAGAGAAGACAAAGACCCAGAAATaGAGTAGATACACCTTGAGA | + |
Preference number: 2 (lower is better) Translates to: KVRVDHLGLRHGLDRTEKTKTQK*SRYTLR Trigger: TCTCAAGGTGTATCTACTGCATTTCTGGGTCTTTGT...CTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CAACTTGGACAAGAGACACTCTGGCAACAATTCTCAAAAAGCCCAAAGTGCAAAGTATCTTCCTGGAACTaGGGGCTGGAACAACAAGCA | + |
Preference number: 2 (lower is better) Translates to: QLGQETLWQQFSKSPKCKVSSWN*GLEQQA Trigger: TGCTTGTTGTTCCAGCCCCCAGTTCCAGGAAGATAC...TTTGCACTTTGGGCTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCCAAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CAA 90 bp | TCAGCTTCCTCTGAGCCTTCTGTGCTTGTTTGTTTGTTTGCTTGCTaGCTTGCTTGCTTGCTTGCTTGCTTGCTTGTTTTTCACCATGAT | + |
Preference number: 2 (lower is better) Translates to: SASSEPSVLVCLFAC*LACLLACLLVFHHD Trigger: ATCATGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CAACTTGGACAAGAGACACTCTGGCAACAATTCTCAAAAAGCCCAAAGTGCAAACTTCTAGTATCTTCCTaGAACTGGGGGCTGGAACAA | + |
Preference number: 2 (lower is better) Translates to: QLGQETLWQQFSKSPKCKLLVSS*NWGLEQ Trigger: TTGTTCCAGCCCCCAGTTCCAGGAAGATACTAGAAG...TTTGCACTTTGGGCTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCCAAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CCA 90 bp | CAACTTGGACAAGAGACACTCTGGCAACAATTCTCAAAAAGCCCAAAGTGCAAATCATGGTTACGTTTATaGATGAAGAAACAGGTTCGG | + |
Preference number: 2 (lower is better) Translates to: QLGQETLWQQFSKSPKCKSWLRL*MKKQVR Trigger: CCGAACCTGTTTCTTCATCCATAAACGTAACCATGA...TTTGCACTTTGGGCTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCCAAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 72 bp | GCTCTGTTTACCCCCAGGAGAATTACAACCAGAATCTaGGGCCACACAGGCATCCAGGGCCCCCGCTCCCTC | + |
Preference number: 3 (lower is better) Translates to: ALFTPRRITTRI*GHTGIQGPRSL Trigger: GAGGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCCTGGGGGTAAACAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 72 bp | GCTCCAGACCTTGGGAGAAGAGGAATTCTAGGTGGGTaGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGT | + |
Preference number: 3 (lower is better) Translates to: APDLGRRGILGG*HLHLWPIPGRG Trigger: ACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCTCCCAAGGTCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 72 bp | CCCTCTGAGCTCTGTAGAGAGAAGGGTGCAGATCACTaGCTGACACTAGTCCAATCTGGCCCACAGGCCAGC | + |
Preference number: 3 (lower is better) Translates to: PSELCREKGADH*LTLVQSGPQAS Trigger: GCTGGCCTGTGGGCCAGATTGGACTAGTGTCAGTCAGTGATCTGCACCCTTCTCTCTACAGAGCTCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 72 bp | GAAGGGTGCAGATCACTGACTGACACTAGTCCAATCTaGCCCACAGGCCAGCCAATGACAGTCCTGCAGAGC | + |
Preference number: 3 (lower is better) Translates to: EGCRSLTDTSPI*PTGQPMTVLQS Trigger: GCTCTGCAGGACTGTCATTGGCTGGCCTGTGGGCCAGATTGGACTAGTGTCAGTCAGTGATCTGCACCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 72 bp | GAGCATGGACCCCCTGATGGCCTGGCATGTCCTTCCTaGAGATTCCAGGTATGGCTTGGTGACATCCATAGG | + |
Preference number: 3 (lower is better) Translates to: EHGPPDGLACPS*RFQVWLGDIHR Trigger: CCTATGGATGTCACCAAGCCATACCTGGAATCTCCAGGAAGGACATGCCAGGCCATCAGGGGGTCCATGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 72 bp | CGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTaGGGGTCAGCACTTCCTCTGGCTCCAGACCTTGGG | + |
Preference number: 3 (lower is better) Translates to: RLSVQIQLSVQA*GSALPLAPDLG Trigger: CCCAAGGTCTGGAGCCAGAGGAAGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 72 bp | AGCCTGAGGGTCAGCACTTCCTCTGGCTCCAGACCTTaGGAGAAGAGGAATTCTAGGTGGGTGGCATCTTCA | + |
Preference number: 3 (lower is better) Translates to: SLRVSTSSGSRP*EKRNSRWVASS Trigger: TGAAGATGCCACCCACCTAGAATTCCTCTTCTCCCAAGGTCTGGAGCCAGAGGAAGTGCTGACCCTCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 72 bp | GACAATCTGAGCTCTGGGGTGTATAGCTCAGTCAGCTaGGCGCATGTTCAGCATTCACGAAGCCCTGGCTTC | + |
Preference number: 3 (lower is better) Translates to: DNLSSGVYSSVS*AHVQHSRSPGF Trigger: GAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGCTATACACCCCAGAGCTCAGATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CAA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCTGCTTGCTTGCTTGCTaGCTTGCTTGTTTTTCACCA | + |
Preference number: 3 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCCLLAC*LACFSP Trigger: TGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCA...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 72 bp | AAACTCTCTCAGAGCCACGGGGGCCTCTCCAAATCCTaGCAGCCAACCACTTATTCTCAATATGGGCCACCT | + |
Preference number: 3 (lower is better) Translates to: KLSQSHGGLSKS*QPTTYSQYGPP Trigger: AGGTGGCCCATATTGAGAATAAGTGGTTGGCTGTCAGGATTTGGAGAGGCCCCCGTGGCTCTGAGAGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR CCA 72 bp | CACAGGAGCCAGGAAAGTGTGAAAGCAGTCAGCCTGTaGTTAGACCCAGACGTGGTATTCGAGAGGATATGG | + |
Preference number: 3 (lower is better) Translates to: HRSQESVKAVSL*LDPDVVFERIW Trigger: CCATATCCTCTCGAATACCACGTCTGGGTCTAACCACAGGCTGACTGCTTTCACACTTTCCTGGCTCCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR CCA 72 bp | GAGAAAAGTCCGAGTGGATCATCTAGGCCTCAGACATaGGCTGGACAGAACAGAGAAGCCACAGAGGTTAGG | + |
Preference number: 3 (lower is better) Translates to: EKSPSGSSRPQT*AGQNREATEVR Trigger: CCTAACCTCTGTGGCTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CAA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTAGGCCATGTCTCAACTaGGACAAGAGACACTCTGGC | + |
Preference number: 3 (lower is better) Translates to: ETAECTNSVECASLRVSTRPCLN*DKRHSG Trigger: GCCAGAGTGTCTCTTGTCCAAGTTGAGACATGGCCT...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CAA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCTGCTTGCTTGCTTGCTaGTTTTTCACCATGATTAAC | + |
Preference number: 3 (lower is better) Translates to: AQSAERMFSIHEALASIPCLLAC*FFTMIN Trigger: GTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CAA 90 bp | GGTCCCCGGGGACTGAGAGATCAGGGTGGACACAGGCACTATTGGTTGTCCAGATGCTTGCTTGCTTGCTaGTTTTTCACCATGATTAAC | + |
Preference number: 3 (lower is better) Translates to: GPRGLRDQGGHRHYWLSRCLLAC*FFTMIN Trigger: GTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA...TCTGGACAACCAATAGTGCCTGTGTCCACCCTGATCTCTCAGTCCCCGGGGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CAA 90 bp | GCCACAGAGGTTAGGACACAGGAGCCAGGAAAGTGTGAAAGCAGTCAGCCTGTGTGCTTGCTTGCTTGCTaGCTTGCTTGTTTTTCACCA | + |
Preference number: 3 (lower is better) Translates to: ATEVRTQEPGKCESSQPVCLLAC*LACFSP Trigger: TGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCA...CACAGGCTGACTGCTTTCACACTTTCCTGGCTCCTGTGTCCTAACCTCTGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR TCA 72 bp | TACAGACAAAGACCCAGAAATGCAGTAGATACACCTTaGGACCCTAGTGCAAGCCCAGCAAGCCCTTGCAGG | + |
Preference number: 3 (lower is better) Translates to: YRQRPRNAVDTP*DPSASPASPCR Trigger: CCTGCAAGGGCTTGCTGGGCTTGCACTAGGGTCTCAAGGTGTATCTACTGCATTTCTGGGTCTTTGTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 72 bp | GCCCTTGCAGGACCTCAGCTTCCTCTGAGCCTTCTGTaGTTGTTTGTTTGTTTGCTTGCTTGCTTGCTTGCT | + |
Preference number: 3 (lower is better) Translates to: ALAGPQLPLSLL*LFVCLLACLLA Trigger: AGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTCCTGCAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR GCA 72 bp | GAGACACTCTGGCAACAATTCTCAAAAAGCCCAAAGTaGAAACTCTCTCAGAGCCACGGGGGCCTCTCCAAA | + |
Preference number: 3 (lower is better) Translates to: ETLWQQFSKSPK*KLSQSHGGLSK Trigger: TTTGGAGAGGCCCCCGTGGCTCTGAGAGAGTTTGCACTTTGGGCTTTTTGAGAATTGTTGCCAGAGTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CAA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATTGCTTGCTTGCTTGCTaGCTTGCTTGTTTTTCACCA | + |
Preference number: 3 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHCLLAC*LACFSP Trigger: TGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCA...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CAA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGTGCTTGCTTGCTTGCTaGTTTTTCACCATGATTAAC | + |
Preference number: 3 (lower is better) Translates to: VGVTAERSFYVLLGIPLWCLLAC*FFTMIN Trigger: GTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR-3UTR CAA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTTGCTTGCTTGCTTGCTaGTTTTTCACCATGATTAAC | + |
Preference number: 3 (lower is better) Translates to: ETAECTNSVECASLRVSTCLLAC*FFTMIN Trigger: GTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
3UTR-3UTR CAA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATTGCTTGCTTGCTTGCTaGTTTTTCACCATGATTAAC | + |
Preference number: 3 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHCLLAC*FFTMIN Trigger: GTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 72 bp | GGTTTCCTTGAGACGGTACTGTCATGGTTACGTTTATaGATGAAGAAACAGGTTCGGTGTAGTGATGCTCTG | + |
Preference number: 3 (lower is better) Translates to: GFLETVLSWLRL*MKKQVRCSDAL Trigger: CAGAGCATCACTACACCGAACCTGTTTCTTCATCCATAAACGTAACCATGACAGTACCGTCTCAAGGAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CCA 72 bp | TGGTATTCGAGAGGATATGGAGGCCATGTCTCAACTTaGACAAGAGACACTCTGGCAACAATTCTCAAAAAG | + |
Preference number: 3 (lower is better) Translates to: WYSRGYGGHVST*TRDTLATILKK Trigger: CTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCCAAGTTGAGACATGGCCTCCATATCCTCTCGAATACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGCGCGGTGCCGGCCCTaGGCAGAGGGAATCTTGATG | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRAARCRP*AEGILM Trigger: CATCAAGATTCCCTCTGCCCAGGGCCGGCACCGCGC...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGCAGGAAGAGCCCAATaGGCATGCTCCTTGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRAAGRAQ*ACSLAP Trigger: CGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGC...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCAGCCAGCCAAGGAGATaGCTCCACCCCGGGGAGCAA | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRASQPRR*LHPGEQ Trigger: TTGCTCCCCGGGGTGGAGCCATCTCCTTGGCTGGCT...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGAGCCAGCCAAGGAGATaGCTCCACCCCGGGGAGCAA | + |
Preference number: 4 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVSQPRR*LHPGEQ Trigger: TTGCTCCCCGGGGTGGAGCCATCTCCTTGGCTGGCT...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGGCCACCGTAGCGCAGTaGCAGGCAGATGGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVATVAQ*QADGQV Trigger: TACCTGGCCATCTGCCTGCCACTGCGCTACGGTGGC...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCGCCACCGTAGCGCAGTaGCAGGCAGATGGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: GELQPESEATQASRAPAPATVAQ*QADGQV Trigger: TACCTGGCCATCTGCCTGCCACTGCGCTACGGTGGC...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGCCACCGTAGCGCAGTaGCAGGCAGATGGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRAATVAQ*QADGQV Trigger: TACCTGGCCATCTGCCTGCCACTGCGCTACGGTGGC...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCGCGCGGTGCCGGCCCTaGGCAGAGGGAATCTTGATG | + |
Preference number: 4 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCARCRP*AEGILM Trigger: CATCAAGATTCCCTCTGCCCAGGGCCGGCACCGCGC...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCGCGCGGTGCCGGCCCTaGGCAGAGGGAATCTTGATG | + |
Preference number: 4 (lower is better) Translates to: AQSAERMFSIHEALASIPARCRP*AEGILM Trigger: CATCAAGATTCCCTCTGCCCAGGGCCGGCACCGCGC...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GGTCCCCGGGGACTGAGAGATCAGGGTGGACACAGGCACTATTGGTTGTCCAGAGCGCGGTGCCGGCCCTaGGCAGAGGGAATCTTGATG | + |
Preference number: 4 (lower is better) Translates to: GPRGLRDQGGHRHYWLSRARCRP*AEGILM Trigger: CATCAAGATTCCCTCTGCCCAGGGCCGGCACCGCGC...TCTGGACAACCAATAGTGCCTGTGTCCACCCTGATCTCTCAGTCCCCGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCGCCACCGTAGCGCAGTaGCAGGCAGATGGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: AQSAERMFSIHEALASIPATVAQ*QADGQV Trigger: TACCTGGCCATCTGCCTGCCACTGCGCTACGGTGGC...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGCACCCACCAGGGAGATaGTGGCCAGGTTTCCAGCTA | + |
Preference number: 4 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVHPPGR*WPGFQL Trigger: TAGCTGGAAACCTGGCCATCATCTCCCTGGTGGGTG...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | CCTTGGGAGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCGCAGGAAGAGCCCAATaGGCATGCTCCTTGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: PWEKRNSRWVASSPVAHPAGRAQ*ACSLAP Trigger: CGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGC...GGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCTCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTCTGTAGGCATCTGTaGGCACCCACCAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRAVCRHL*APTREM Trigger: CATCTCCCTGGTGGGTGCCCACAGATGCCTACAGAC...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GCCCAGCAAGCCCTTGCAGGACCTCAGCTTCCTCTGAGCCTTCTGTGCTTGTTTGCCACCGTAGCGCAGTaGCAGGCAGATGGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: AQQALAGPQLPLSLLCLFATVAQ*QADGQV Trigger: TACCTGGCCATCTGCCTGCCACTGCGCTACGGTGGC...AAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | AGAAGAGGAATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGCGCGGTGCCGGCCCTaGGCAGAGGGAATCTTGATG | + |
Preference number: 4 (lower is better) Translates to: RRGILGGWHLHLWPIPGRARCRP*AEGILM Trigger: CATCAAGATTCCCTCTGCCCAGGGCCGGCACCGCGC...CCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAATTCCTCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | AATCTGGCCCACAGGCCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGACACCCACCAGGGAGATaGTGGCCAGGTTTCCAGCTA | + |
Preference number: 4 (lower is better) Translates to: NLAHRPANDSPAEQPLTGHPPGR*WPGFQL Trigger: TAGCTGGAAACCTGGCCATCATCTCCCTGGTGGGTG...TCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGGCCTGTGGGCCAGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | CTGATGGCCTGGCATGTCCTTCCTGGAGATTCCAGGTATGGCTTGGTGACATCCGCAGGAAGAGCCCAATaGGCATGCTCCTTGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: LMAWHVLPGDSRYGLVTSAGRAQ*ACSLAP Trigger: CGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGC...GGATGTCACCAAGCCATACCTGGAATCTCCAGGAAGGACATGCCAGGCCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | AATCTGGCCCACAGGCCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGTCTGTAGGCATCTGTaGGCACCCACCAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: NLAHRPANDSPAEQPLTGVCRHL*APTREM Trigger: CATCTCCCTGGTGGGTGCCCACAGATGCCTACAGAC...TCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGGCCTGTGGGCCAGATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGGCGCGGTGCCGGCCCTaGGCAGAGGGAATCTTGATG | + |
Preference number: 4 (lower is better) Translates to: VGVTAERSFYVLLGIPLWARCRP*AEGILM Trigger: CATCAAGATTCCCTCTGCCCAGGGCCGGCACCGCGC...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTTGGGAGGTAGCCAGCCAAGGAGATaGCTCCACCCCGGGGAGCAA | + |
Preference number: 4 (lower is better) Translates to: PGFHPQNHKTEHQCHLGGSQPRR*LHPGEQ Trigger: TTGCTCCCCGGGGTGGAGCCATCTCCTTGGCTGGCT...ACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
||
CDS-3UTR CCA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGGCCACCGTAGCGCAGTaGCAGGCAGATGGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: VGVTAERSFYVLLGIPLWATVAQ*QADGQV Trigger: TACCTGGCCATCTGCCTGCCACTGCGCTACGGTGGC...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCCACAGGAGCCCAGAATaGCACAGAAGGCAATACCAA | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRAHRSPE*HRRQYQ Trigger: TTGGTATTGCCTTCTGTGTCATTCTGGGCTCCTGTG...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCCACAGGAGCCCAGAATaGCACAGAAGGCAATACCAA | + |
Preference number: 4 (lower is better) Translates to: GELQPESEATQASRAPAPHRSPE*HRRQYQ Trigger: TTGGTATTGCCTTCTGTGTCATTCTGGGCTCCTGTG...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCGAGTGGATCATCTAGGCCTCAGACATGGGCTGGACAGAACAGAGAAGGCAGGAAGAGCCCAATaGGCATGCTCCTTGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: KVRVDHLGLRHGLDRTEKAGRAQ*ACSLAP Trigger: CGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGC...CTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | CCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTTGGGAGGTCACCCACCAGGGAGATaGTGGCCAGGTTTCCAGCTA | + |
Preference number: 4 (lower is better) Translates to: PGFHPQNHKTEHQCHLGGHPPGR*WPGFQL Trigger: TAGCTGGAAACCTGGCCATCATCTCCCTGGTGGGTG...ACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCCACAGGAGCCCAGAATaGCACAGAAGGCAATACCAA | + |
Preference number: 4 (lower is better) Translates to: AQSAERMFSIHEALASIPHRSPE*HRRQYQ Trigger: TTGGTATTGCCTTCTGTGTCATTCTGGGCTCCTGTG...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGTCCTCAGGGTATATATaGAAGGGTTCAAGACGGGTG | + |
Preference number: 4 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVSSGYI*KGSRRV Trigger: CACCCGTCTTGAACCCTTTCATATATACCCTGAGGA...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | GAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTGGAAGCAGGAAGAGCCCAATaGGCATGCTCCTTGGCCCCG | + |
Preference number: 4 (lower is better) Translates to: EGPPRDSESCFPSSIFLEAGRAQ*ACSLAP Trigger: CGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGC...TTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GGGGTCTGGCCAGAACTGGCGCACAGCTTCTGGTATTTATATTGGAGGTTTAGAAGCCAGCCAAGGAGATaGCTCCACCCCGGGGAGCAA | + |
Preference number: 4 (lower is better) Translates to: GVWPELAHSFWYLYWRFRSQPRR*LHPGEQ Trigger: TTGCTCCCCGGGGTGGAGCCATCTCCTTGGCTGGCT...TCTAAACCTCCAATATAAATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | GAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTGGAAAGCCAGCCAAGGAGATaGCTCCACCCCGGGGAGCAA | + |
Preference number: 4 (lower is better) Translates to: EGPPRDSESCFPSSIFLESQPRR*LHPGEQ Trigger: TTGCTCCCCGGGGTGGAGCCATCTCCTTGGCTGGCT...TTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GAGACGGCTGAGTGTACAAATTCAGTTGAGTGTGCAAGCCTGAGGGTCAGCACTCACCCACCAGGGAGATaGTGGCCAGGTTTCCAGCTA | + |
Preference number: 4 (lower is better) Translates to: ETAECTNSVECASLRVSTHPPGR*WPGFQL Trigger: TAGCTGGAAACCTGGCCATCATCTCCCTGGTGGGTG...AGTGCTGACCCTCAGGCTTGCACACTCAACTGAATTTGTACACTCAGCCGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GCCCAGCAAGCCCTTGCAGGACCTCAGCTTCCTCTGAGCCTTCTGTGCTTGTTTCACAGGAGCCCAGAATaGCACAGAAGGCAATACCAA | + |
Preference number: 4 (lower is better) Translates to: AQQALAGPQLPLSLLCLFHRSPE*HRRQYQ Trigger: TTGGTATTGCCTTCTGTGTCATTCTGGGCTCCTGTG...AAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | AATCTGGCCCACAGGCCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGATCCTCAGGGTATATATaGAAGGGTTCAAGACGGGTG | + |
Preference number: 4 (lower is better) Translates to: NLAHRPANDSPAEQPLTGSSGYI*KGSRRV Trigger: CACCCGTCTTGAACCCTTTCATATATACCCTGAGGA...TCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGGCCTGTGGGCCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCAGCAGGAACTATGATTaGAGAAAAGCCACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: PANDSPAEQPLTGDAHRASRNYD*RKATQP Trigger: TGGCTGTGTGGCTTTTCTGCAATCATAGTTCCTGCT...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAAGACGGTGTCTGTAGGCATCTGTaGGCACCCACCAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: HCREELLCPTWDSTLEDGVCRHL*APTREM Trigger: CATCTCCCTGGTGGGTGCCCACAGATGCCTACAGAC...ACCGTCTTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GGGGTCTGGCCAGAACTGGCGCACAGCTTCTGGTATTTATATTGGAGGTTTAGACACCCACCAGGGAGATaGTGGCCAGGTTTCCAGCTA | + |
Preference number: 4 (lower is better) Translates to: GVWPELAHSFWYLYWRFRHPPGR*WPGFQL Trigger: TAGCTGGAAACCTGGCCATCATCTCCCTGGTGGGTG...TCTAAACCTCCAATATAAATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | ACTGACACTAGTCCAATCTGGCCCACAGGCCAGCCAATGACAGTCCTGCAGAGCTCCTCAGGGTATATATaGAAGGGTTCAAGACGGGTG | + |
Preference number: 4 (lower is better) Translates to: TDTSPIWPTGQPMTVLQSSSGYI*KGSRRV Trigger: CACCCGTCTTGAACCCTTTCATATATACCCTGAGGA...GCTCTGCAGGACTGTCATTGGCTGGCCTGTGGGCCAGATTGGACTAGTGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GCCCAGCAAGCCCTTGCAGGACCTCAGCTTCCTCTGAGCCTTCTGTGCTTGTTTTCCTCAGGGTATATATaGAAGGGTTCAAGACGGGTG | + |
Preference number: 4 (lower is better) Translates to: AQQALAGPQLPLSLLCLFSSGYI*KGSRRV Trigger: CACCCGTCTTGAACCCTTTCATATATACCCTGAGGA...AAACAAGCACAGAAGGCTCAGAGGAAGCTGAGGTCCTGCAAGGGCTTGCTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCAGCAGGAACTATGATTaGAGAAAAGCCACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCSRNYD*RKATQP Trigger: TGGCTGTGTGGCTTTTCTGCAATCATAGTTCCTGCT...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | ACTGACACTAGTCCAATCTGGCCCACAGGCCAGCCAATGACAGTCCTGCAGAGCAGCAGGAACTATGATTaGAGAAAAGCCACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: TDTSPIWPTGQPMTVLQSSRNYD*RKATQP Trigger: TGGCTGTGTGGCTTTTCTGCAATCATAGTTCCTGCT...GCTCTGCAGGACTGTCATTGGCTGGCCTGTGGGCCAGATTGGACTAGTGTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCACAGGAGCCCAGAATaGCACAGAAGGCAATACCAA | + |
Preference number: 4 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHHRSPE*HRRQYQ Trigger: TTGGTATTGCCTTCTGTGTCATTCTGGGCTCCTGTG...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | TGCTTGCTTGCTTGCTTGTTTTTCACCATGATTAACCTCTGTGAGCATGGACCCGTCTGTAGGCATCTGTaGGCACCCACCAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: CLLACLFFTMINLCEHGPVCRHL*APTREM Trigger: CATCTCCCTGGTGGGTGCCCACAGATGCCTACAGAC...GGGTCCATGCTCACAGAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAGCAGGAACTATGATTaGAGAAAAGCCACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: VGVTAERSFYVLLGIPLWSRNYD*RKATQP Trigger: TGGCTGTGTGGCTTTTCTGCAATCATAGTTCCTGCT...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | GAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTGGAATCCTCAGGGTATATATaGAAGGGTTCAAGACGGGTG | + |
Preference number: 4 (lower is better) Translates to: EGPPRDSESCFPSSIFLESSGYI*KGSRRV Trigger: CACCCGTCTTGAACCCTTTCATATATACCCTGAGGA...TTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | AAAGTCCGAGTGGATCATCTAGGCCTCAGACATGGGCTGGACAGAACAGAGAAGAGCAGGAACTATGATTaGAGAAAAGCCACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: KVRVDHLGLRHGLDRTEKSRNYD*RKATQP Trigger: TGGCTGTGTGGCTTTTCTGCAATCATAGTTCCTGCT...CTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CCA 90 bp | CAACTTGGACAAGAGACACTCTGGCAACAATTCTCAAAAAGCCCAAAGTGCAAAGTCTGTAGGCATCTGTaGGCACCCACCAGGGAGATG | + |
Preference number: 4 (lower is better) Translates to: QLGQETLWQQFSKSPKCKVCRHL*APTREM Trigger: CATCTCCCTGGTGGGTGCCCACAGATGCCTACAGAC...TTTGCACTTTGGGCTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCCAAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CAA 72 bp | CAGCTTCCTCTGAGCCTTCTGTGCTTGTTTGTTTGTTaGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGC | + |
Preference number: 4 (lower is better) Translates to: QLPLSLLCLFVC*LACLLACLLAC Trigger: GCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAAGCACAGAAGGCTCAGAGGAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR TCA 90 bp | TGCTTGCTTGCTTGCTTGTTTTTCACCATGATTAACCTCTGTGAGCATGGACCCTCCTCAGGGTATATATaGAAGGGTTCAAGACGGGTG | + |
Preference number: 4 (lower is better) Translates to: CLLACLFFTMINLCEHGPSSGYI*KGSRRV Trigger: CACCCGTCTTGAACCCTTTCATATATACCCTGAGGA...GGGTCCATGCTCACAGAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR GCA 90 bp | ATTGGAGGTTTAGAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTAGCAGGAACTATGATTaGAGAAAAGCCACACAGCCA | + |
Preference number: 4 (lower is better) Translates to: IGGLEGPPRDSESCFPSSSRNYD*RKATQP Trigger: TGGCTGTGTGGCTTTTCTGCAATCATAGTTCCTGCT...ACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTCTAAACCTCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CAA 72 bp | TTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTTGCTaGTTTTTCACCATGATTAACCTCTGTGAGCATGGA | + |
Preference number: 4 (lower is better) Translates to: LLACLLACLLAC*FFTMINLCEHG Trigger: TCCATGCTCACAGAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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3UTR CAA 72 bp | TTGTTTGTTTGTTTGCTTGCTTGCTTGCTTGCTTGCTaGCTTGCTTGCTTGTTTTTCACCATGATTAACCTC | + |
Preference number: 4 (lower is better) Translates to: LFVCLLACLLAC*LACLFFTMINL Trigger: GAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAGCAAACAAACAAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCCAATGCGCATGCTCCTaGGCCCCGGGAAGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: PANDSPAEQPLTGDAHRAQCACS*APGSPA Trigger: TGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTG...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCCAATGCGCATGCTCCTaGGCCCCGGGAAGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: AQSAERMFSIHEALASIPQCACS*APGSPA Trigger: TGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTG...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GGTCCCCGGGGACTGAGAGATCAGGGTGGACACAGGCACTATTGGTTGTCCAGACAATGCGCATGCTCCTaGGCCCCGGGAAGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: GPRGLRDQGGHRHYWLSRQCACS*APGSPA Trigger: TGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTG...TCTGGACAACCAATAGTGCCTGTGTCCACCCTGATCTCTCAGTCCCCGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGAGCACTGTGACAGCTTaGGTGAGGTCCAAGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVSTVTA*VRSKEL Trigger: GAGCTCCTTGGACCTCACCAAAGCTGTCACAGTGCT...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGTCACAGAAGAAGTGGTaGATGACACGTGAGCCGCAG | + |
Preference number: 5 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVSQKKW*MTREPQ Trigger: CTGCGGCTCACGTGTCATCAACCACTTCTTCTGTGA...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GGAGAATTACAACCAGAATCTGAGGCCACACAGGCATCCAGGGCCCCCGCTCCCTCACAGAAGAAGTGGTaGATGACACGTGAGCCGCAG | + |
Preference number: 5 (lower is better) Translates to: GELQPESEATQASRAPAPSQKKW*MTREPQ Trigger: CTGCGGCTCACGTGTCATCAACCACTTCTTCTGTGA...GGGAGCGGGGGCCCTGGATGCCTGTGTGGCCTCAGATTCTGGTTGTAATTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GGTCCCCGGGGACTGAGAGATCAGGGTGGACACAGGCACTATTGGTTGTCCAGAAGCACTGTGACAGCTTaGGTGAGGTCCAAGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: GPRGLRDQGGHRHYWLSRSTVTA*VRSKEL Trigger: GAGCTCCTTGGACCTCACCAAAGCTGTCACAGTGCT...TCTGGACAACCAATAGTGCCTGTGTCCACCCTGATCTCTCAGTCCCCGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCAGCACTGTGACAGCTTaGGTGAGGTCCAAGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCSTVTA*VRSKEL Trigger: GAGCTCCTTGGACCTCACCAAAGCTGTCACAGTGCT...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS CCA 90 bp | ATACATGACCAGGAAAAGCAGGAAGAGCCCAATGCGCATGCTCCTTaGCCCCGGGAAGCCCAGCAAGATGAATGGTCCTGGTGTGGACAG | + |
Preference number: 5 (lower is better) Translates to: IHDQEKQEEPNAHAP*PREAQQDEWSWCGQ Trigger: CTGTCCACACCAGGACCATTCATCTTGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGCTTTTCCTGGTCATGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTGGAACAATGCGCATGCTCCTaGGCCCCGGGAAGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: EGPPRDSESCFPSSIFLEQCACS*APGSPA Trigger: TGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTG...TTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGTGGGCAGAGGGAATCTaGATGATGGTAGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVWAEGI*MMVVMM Trigger: CATCATCACTACCATCATCAAGATTCCCTCTGCCCA...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | CCAGCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGGTGTGACAATGGTATaGAGCACTGTGACAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: PANDSPAEQPLTGDAHRAGVTMV*STVTAL Trigger: CAAAGCTGTCACAGTGCTCAATACCATTGTCACACC...GGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCCAATGACAGTCCTGCAGAGCAGCCTCTGACAGGAGATGCACACAGGGCCGTGGGTGTGACAATGGTATaGAGCACTGTGACAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: ANDSPAEQPLTGDAHRAVGVTMV*STVTAL Trigger: CAAAGCTGTCACAGTGCTCAATACCATTGTCACACC...CACGGCCCTGTGTGCATCTCCTGTCAGAGGCTGCTCTGCAGGACTGTCATTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | TGCTTGCTTGCTTGCTTGTTTTTCACCATGATTAACCTCTGTGAGCATGGACCCCAATGCGCATGCTCCTaGGCCCCGGGAAGCCCAGCA | + |
Preference number: 5 (lower is better) Translates to: CLLACLFFTMINLCEHGPQCACS*APGSPA Trigger: TGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTG...GGGTCCATGCTCACAGAGGTTAATCATGGTGAAAAACAAGCAAGCAAGCAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCTGGGCAGAGGGAATCTaGATGATGGTAGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: AQSAERMFSIHEALASIPWAEGI*MMVVMM Trigger: CATCATCACTACCATCATCAAGATTCCCTCTGCCCA...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | CCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATCAGTGCCATTTGGGAGGTAGCACTGTGACAGCTTaGGTGAGGTCCAAGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: PGFHPQNHKTEHQCHLGGSTVTA*VRSKEL Trigger: GAGCTCCTTGGACCTCACCAAAGCTGTCACAGTGCT...ACCTCCCAAATGGCACTGATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | ATTCTAGGTGGGTGGCATCTTCACCTGTGGCCCATCCCAGGTAGGGGTCACTGCGGTGTGACAATGGTATaGAGCACTGTGACAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: ILGGWHLHLWPIPGRGHCGVTMV*STVTAL Trigger: CAAAGCTGTCACAGTGCTCAATACCATTGTCACACC...GCAGTGACCCCTACCTGGGATGGGCCACAGGTGAAGATGCCACCCACCTAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GCTCAGTCAGCTGAGCGCATGTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCGGTGTGACAATGGTATaGAGCACTGTGACAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: AQSAERMFSIHEALASIPGVTMV*STVTAL Trigger: CAAAGCTGTCACAGTGCTCAATACCATTGTCACACC...GGGGATGGAAGCCAGGGCTTCGTGAATGCTGAACATGCGCTCAGCTGACTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GTAGGGGTCACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGTCACAGAAGAAGTGGTaGATGACACGTGAGCCGCAG | + |
Preference number: 5 (lower is better) Translates to: VGVTAERSFYVLLGIPLWSQKKW*MTREPQ Trigger: CTGCGGCTCACGTGTCATCAACCACTTCTTCTGTGA...CCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTGACCCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | AAAGTCCGAGTGGATCATCTAGGCCTCAGACATGGGCTGGACAGAACAGAGAAGAGCACTGTGACAGCTTaGGTGAGGTCCAAGGAGCTC | + |
Preference number: 5 (lower is better) Translates to: KVRVDHLGLRHGLDRTEKSTVTA*VRSKEL Trigger: GAGCTCCTTGGACCTCACCAAAGCTGTCACAGTGCT...CTTCTCTGTTCTGTCCAGCCCATGTCTGAGGCCTAGATGATCCACTCGGACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATTCACAGAAGAAGTGGTaGATGACACGTGAGCCGCAG | + |
Preference number: 5 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHSQKKW*MTREPQ Trigger: CTGCGGCTCACGTGTCATCAACCACTTCTTCTGTGA...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | CACTGCAGAGAGGAGCTTCTATGTCCTACTTGGGATTCCACTCTGGAAGACGGTTCACAGAAGAAGTGGTaGATGACACGTGAGCCGCAG | + |
Preference number: 5 (lower is better) Translates to: HCREELLCPTWDSTLEDGSQKKW*MTREPQ Trigger: CTGCGGCTCACGTGTCATCAACCACTTCTTCTGTGA...ACCGTCTTCCAGAGTGGAATCCCAAGTAGGACATAGAAGCTCCTCTCTGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GGGGTCTGGCCAGAACTGGCGCACAGCTTCTGGTATTTATATTGGAGGTTTAGATCACAGAAGAAGTGGTaGATGACACGTGAGCCGCAG | + |
Preference number: 5 (lower is better) Translates to: GVWPELAHSFWYLYWRFRSQKKW*MTREPQ Trigger: CTGCGGCTCACGTGTCATCAACCACTTCTTCTGTGA...TCTAAACCTCCAATATAAATACCAGAAGCTGTGCGCCAGTTCTGGCCAGACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GTTCAGCATTCACGAAGCCCTGGCTTCCATCCCCAGAACCACAAAACAGAGCATGGTGTGACAATGGTATaGAGCACTGTGACAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: VQHSRSPGFHPQNHKTEHGVTMV*STVTAL Trigger: CAAAGCTGTCACAGTGCTCAATACCATTGTCACACC...ATGCTCTGTTTTGTGGTTCTGGGGATGGAAGCCAGGGCTTCGTGAATGCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTGGAATGGGCAGAGGGAATCTaGATGATGGTAGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: EGPPRDSESCFPSSIFLEWAEGI*MMVVMM Trigger: CATCATCACTACCATCATCAAGATTCCCTCTGCCCA...TTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | GAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTATCTTCCTGGAAGGTGTGACAATGGTATaGAGCACTGTGACAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: EGPPRDSESCFPSSIFLEGVTMV*STVTAL Trigger: CAAAGCTGTCACAGTGCTCAATACCATTGTCACACC...TTCCAGGAAGATACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | ATTGGAGGTTTAGAGGGACCTCCTAGGGACTCAGAATCCTGTTTCCCTTCTAGTTGGGCAGAGGGAATCTaGATGATGGTAGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: IGGLEGPPRDSESCFPSSWAEGI*MMVVMM Trigger: CATCATCACTACCATCATCAAGATTCCCTCTGCCCA...ACTAGAAGGGAAACAGGATTCTGAGTCCCTAGGAGGTCCCTCTAAACCTCCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS-3UTR CAA 90 bp | CAACTTGGACAAGAGACACTCTGGCAACAATTCTCAAAAAGCCCAAAGTGCAAATGGGCAGAGGGAATCTaGATGATGGTAGTGATGATG | + |
Preference number: 5 (lower is better) Translates to: QLGQETLWQQFSKSPKCKWAEGI*MMVVMM Trigger: CATCATCACTACCATCATCAAGATTCCCTCTGCCCA...TTTGCACTTTGGGCTTTTTGAGAATTGTTGCCAGAGTGTCTCTTGTCCAAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS TCA 72 bp | TGCGCATGCTCCTTGGCCCCGGGAAGCCCAGCAAGATaGATGGTCCTGGTGTGGACAGGTTCTGGCCAGTAC | + |
Preference number: 6 (lower is better) Translates to: CACSLAPGSPAR*MVLVWTGSGQY Trigger: GTACTGGCCAGAACCTGTCCACACCAGGACCATTCATCTTGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS CCA 72 bp | CCTTGGCCCCGGGAAGCCCAGCAAGATGAATGGTCCTaGTGTGGACAGGTTCTGGCCAGTACTCCAAGCCAT | + |
Preference number: 6 (lower is better) Translates to: PWPREAQQDEWS*CGQVLASTPSH Trigger: ATGGCTTGGAGTACTGGCCAGAACCTGTCCACACCAGGACCATTCATCTTGCTGGGCTTCCCGGGGCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS CCA 72 bp | CATGCTCCTTGGCCCCGGGAAGCCCAGCAAGATGAATaGTCCTGGTGTGGACAGGTTCTGGCCAGTACTCCA | + |
Preference number: 6 (lower is better) Translates to: HAPWPREAQQDE*SWCGQVLASTP Trigger: TGGAGTACTGGCCAGAACCTGTCCACACCAGGACCATTCATCTTGCTGGGCTTCCCGGGGCCAAGGAGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS CCA 72 bp | CAGGAAAAGCAGGAAGAGCCCAATGCGCATGCTCCTTaGCCCCGGGAAGCCCAGCAAGATGAATGGTCCTGG | + |
Preference number: 6 (lower is better) Translates to: QEKQEEPNAHAP*PREAQQDEWSW Trigger: CCAGGACCATTCATCTTGCTGGGCTTCCCGGGGCCAAGGAGCATGCGCATTGGGCTCTTCCTGCTTTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS CAA 90 bp | GGGTTCAAGACGGGTGTGACAATGGTATTGAGCACTGTGACAGCTTaGGTGAGGTCCAAGGAGCTCTCTACCGAGGTCCTCACGTGCAAG | + |
Preference number: 6 (lower is better) Translates to: GFKTGVTMVLSTVTA*VRSKELSTEVLTCK Trigger: CTTGCACGTGAGGACCTCGGTAGAGAGCTCCTTGGACCTCACCAAAGCTGTCACAGTGCTCAATACCATTGTCACACCCGTCTTGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |
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CDS GCA 72 bp | TACCAAAAGACACTAGCTCTACCACCTGCGTGTCCGTaGAGGAAAGCACTATCCAGGGCGAAATGTCACAGA | + |
Preference number: 6 (lower is better) Translates to: YQKTLALPPACP*RKALSRAKCHR Trigger: TCTGTGACATTTCGCCCTGGATAGTGCTTTCCTGCACGGACACGCAGGTGGTAGAGCTAGTGTCTTTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000055890.6 ENSMUST00000209314.3 ENSMUST00000213953.2 ENSMUST00000214272.2 ENSMUST00000215785.2 ENSMUST00000216023.2 |