Pregenerated sensors for OLFR521 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073997Ensembl transcript IDs: ENSMUST00000219663.2, ENSMUST00000220001.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGGAGTCATGAATCGTGGCAGGCAATGCTTACTGGCTCTCTTCTaGCTTGCAGAGCCACGGTTCCAGCCTAGGCCCACCTGCTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SGVMNRGRQCLLALF*LAEPRFQPRPTCSG Trigger: TCCTGAGCAGGTGGGCCTAGGCTGGAACCGTGGCTCTGCAAGGCAGAAGAGAGCCAGTAAGCATTGCCTGCCACGATTCATGACTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR TCA 90 bp | TGGAAGCTCACAACTAGCTGTAGCTCCAATTCCAGGGGATCTGGCACCTCCATATTCCCACTGTTCCCCTaGGAGGTGTTTTTAAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: WKLTTSCSSNSRGSGTSIFPLFP*EVFLSG Trigger: ACCACTTAAAAACACCTCTCAGGGGAACAGTGGGAA...TATGGAGGTGCCAGATCCCCTGGAATTGGAGCTACAGCTAGTTGTGAGCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTCAGTCCCTGGATGAACAGAACAGGTATTTAGAAGTTGGCTCAGTGATTCTGAGACTCCCTCAATaGGTGTTAGTGGGCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FVQSLDEQNRYLEVGSVILRLPQ*VLVGSG Trigger: CCCTGAGCCCACTAACACTCATTGAGGGAGTCTCAG...AATCACTGAGCCAACTTCTAAATACCTGTTCTGTTCATCCAGGGACTGAACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGCTCACAACTAGCTGTAGCTCCAATTCCAGGGGATCTGGCACCTCCATAGTGACTCTGAACAAGTaGAACAAGAATTCCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: WKLTTSCSSNSRGSGTSIVTLNK*NKNSIH Trigger: ATGGATGGAATTCTTGTTCCACTTGTTCAGAGTCAC...TATGGAGGTGCCAGATCCCCTGGAATTGGAGCTACAGCTAGTTGTGAGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACAGTTTACATTGAGGGAATCCAAGGGAGAGATATAAGGAAGGAACCTGGAGAGATTCCCCCTTCATaGGTTGGGTGTGTTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: FTVYIEGIQGRDIRKEPGEIPPS*VGCVEV Trigger: AACCTCAACACACCCAACCCATGAAGGGGGAATCTC...TCCAGGTTCCTTCCTTATATCTCTCCCTTGGATTCCCTCAATGTAAACTGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTGTTCAGTCCCTGGATGAACAGAACAGGTATTTAGAAGTTGGCTCAGTGTTAAGTGGTAGCTTCTaGAAAGAGGGCAAGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TFVQSLDEQNRYLEVGSVLSGSF*KEGKSE Trigger: TTCACTCTTGCCCTCTTTGCAGAAGCTACCACTTAA...CACTGAGCCAACTTCTAAATACCTGTTCTGTTCATCCAGGGACTGAACAAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGAGGGCAAGAGTGAATCACAGCTACGTGTCAGAAACACTGGGGATTTTCGAGACATGTGAGAATTaGTGTTCTGATTATTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: AKRARVNHSYVSETLGIFETCEN*CSDYLA Trigger: AGCTAAATAATCAGAACACCAATTCTCACATGTCTC...GAAAATCCCCAGTGTTTCTGACACGTAGCTGTGATTCACTCTTGCCCTCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | TTTACAGTTTACATTGAGGGAATCCAAGGGAGAGATATAAGGAAGGAACCTGGATTACTCTCTGAGGGCTaGACTGAAGAAAATGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: FTVYIEGIQGRDIRKEPGLLSEG*TEENVL Trigger: CAGGACATTTTCTTCAGTCCAGCCCTCAGAGAGTAA...TCCAGGTTCCTTCCTTATATCTCTCCCTTGGATTCCCTCAATGTAAACTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR GCA 90 bp | TTTACAGTTTACATTGAGGGAATCCAAGGGAGAGATATAAGGAAGGAACCTGGATTAAGTGGTAGCTTCTaGAAAGAGGGCAAGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: FTVYIEGIQGRDIRKEPGLSGSF*KEGKSE Trigger: TTCACTCTTGCCCTCTTTGCAGAAGCTACCACTTAA...TCCAGGTTCCTTCCTTATATCTCTCCCTTGGATTCCCTCAATGTAAACTGTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCACCCAGATCCCCCATCTCTTACACCTAAATACTTTATATACTTTTGTTGTGACTCTGAACAAGTaGAACAAGAATTCCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: SSTQIPHLLHLNTLYTFVVTLNK*NKNSIH Trigger: ATGGATGGAATTCTTGTTCCACTTGTTCAGAGTCAC...AACAAAAGTATATAAAGTATTTAGGTGTAAGAGATGGGGGATCTGGGTGCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGGTTACAGATAGGATTGGCAGAAACTCCAGATATCGGAATGAGAATACAAACGTGTCAGAAACACTaGGGATTTTCAGAAAAATTG | + |
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Preference number: 2 (lower is better) Translates to: EWLQIGLAETPDIGMRIQTCQKH*GFSEKL Trigger: CAATTTTTCTGAAAATCCCCAGTGTTTCTGACACGT...TTGTATTCTCATTCCGATATCTGGAGTTTCTGCCAATCCTATCTGTAACCATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGGTTACAGATAGGATTGGCAGAAACTCCAGATATCGGAATGAGAATACAAGAGACATGTGAGAATTaGTGTTCTGATTATTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: EWLQIGLAETPDIGMRIQETCEN*CSDYLA Trigger: AGCTAAATAATCAGAACACCAATTCTCACATGTCTC...TTGTATTCTCATTCCGATATCTGGAGTTTCTGCCAATCCTATCTGTAACCATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR GCA 72 bp | ATGAATCGTGGCAGGCAATGCTTACTGGCTCTCTTCTaGCTTGCAGAGCCACGGTTCCAGCCTAGGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: MNRGRQCLLALF*LAEPRFQPRPT Trigger: GGTGGGCCTAGGCTGGAACCGTGGCTCTGCAAGGCAGAAGAGAGCCAGTAAGCATTGCCTGCCACGATTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR CCA 72 bp | CCCACCTGCTCAGGAATGATATTACTCTCTGAGGGCTaGACTGAAGAAAATGTCCTGCAGCCATACCCGTGG | + |
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Preference number: 3 (lower is better) Translates to: PTCSGMILLSEG*TEENVLQPYPW Trigger: CCACGGGTATGGCTGCAGGACATTTTCTTCAGTCCAGCCCTCAGAGAGTAATATCATTCCTGAGCAGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR TCA 72 bp | GGCAGCTTAGGGAGTCAGCCATTCCCACTGTTCCCCTaGGAGGTGTTTTTAAGTGGTAGCTTCTGCAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: GSLGSQPFPLFP*EVFLSGSFCKE Trigger: CTCTTTGCAGAAGCTACCACTTAAAAACACCTCTCAGGGGAACAGTGGGAATGGCTGACTCCCTAAGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CAA 90 bp | CTCTCTGAGGGCTGGACTGAAGAAAATGTCCTGCAGCCATACCCGTGGGCAATCTGGTTACAGATAGGATaGGCAGAAACTCCAGATATC | + |
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Preference number: 3 (lower is better) Translates to: LSEGWTEENVLQPYPWAIWLQIG*AETPDI Trigger: GATATCTGGAGTTTCTGCCAATCCTATCTGTAACCA...GATTGCCCACGGGTATGGCTGCAGGACATTTTCTTCAGTCCAGCCCTCAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR TCA 72 bp | GGGAGAGATATAAGGAAGGAACCTGGAGGCAGGAACTaGATCAGGAGTCATGAATCGTGGCAGGCAATGCTT | + |
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Preference number: 3 (lower is better) Translates to: GRDIRKEPGGRN*IRSHESWQAML Trigger: AAGCATTGCCTGCCACGATTCATGACTCCTGATTCAGTTCCTGCCTCCAGGTTCCTTCCTTATATCTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR GCA 72 bp | TATTACTCTCTGAGGGCTGGACTGAAGAAAATGTCCTaGAGCCATACCCGTGGGCAATCTAATGAAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: YYSLRAGLKKMS*SHTRGQSNEGK Trigger: CTTCCCTTCATTAGATTGCCCACGGGTATGGCTGCAGGACATTTTCTTCAGTCCAGCCCTCAGAGAGTAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGAGGGCAAGAGTGAATCACAGCTACGTGTCAGAAACACTGGGGATTTTCTCCTCCCCTCCCCAGTaGTATTCACTGTCTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: AKRARVNHSYVSETLGIFSSPPQ*YSLSYK Trigger: TTTATAAGACAGTGAATACAACTGGGGAGGGGAGGA...GAAAATCCCCAGTGTTTCTGACACGTAGCTGTGATTCACTCTTGCCCTCTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR TCA 72 bp | TGGGTTGGGTGTGTTGAGGTTTGTGTCAAGCCACACTaGGTTTTATATGATGAATGGTTACAGATAGGATTG | + |
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Preference number: 3 (lower is better) Translates to: WVGCVEVCVKPH*VLYDEWLQIGL Trigger: CAATCCTATCTGTAACCATTCATCATATAAAACTCAGTGTGGCTTGACACAAACCTCAACACACCCAACCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTTGAGGTTTGTGTCAAGCCACACTGAGTTTTATATGATGAATGGTTACAGATCCTCCCCTCCCCAGTaGTATTCACTGTCTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: VLRFVSSHTEFYMMNGYRSSPPQ*YSLSYK Trigger: TTTATAAGACAGTGAATACAACTGGGGAGGGGAGGA...TCTGTAACCATTCATCATATAAAACTCAGTGTGGCTTGACACAAACCTCAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR TCA 72 bp | ACATGTGAGAATTGGTGTTCTGATTATTTAGCTGAGTaGATCTGCCACGATTTCCTCTCTACCATTAGCGAT | + |
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Preference number: 3 (lower is better) Translates to: TCENWCSDYLAE*ICHDFLSTISD Trigger: ATCGCTAATGGTAGAGAGGAAATCGTGGCAGATTCACTCAGCTAAATAATCAGAACACCAATTCTCACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR CAA 72 bp | ATCGTGGCAGGCAATGCTTACTGGCTCTCTTCTGCCTaGCAGAGCCACGGTTCCAGCCTAGGCCCACCTGCT | + |
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Preference number: 4 (lower is better) Translates to: IVAGNAYWLSSA*QSHGSSLGPPA Trigger: AGCAGGTGGGCCTAGGCTGGAACCGTGGCTCTGCAAGGCAGAAGAGAGCCAGTAAGCATTGCCTGCCACGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCACAACTAGCTGTAGCTCCAATTCCAGGGGATCTGGCACCTCCATAAAGCCCATGAGTGTCTaGGGAGTGGTGTCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: WKLTTSCSSNSRGSGTSIKPMSV*GVVSEQ Trigger: CTGCTCAGACACCACTCCCCAGACACTCATGGGCTT...TATGGAGGTGCCAGATCCCCTGGAATTGGAGCTACAGCTAGTTGTGAGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGAGGGCAAGAGTGAATCACAGCTACGTGTCAGAAACACTGGGGATTTTCCGTTCCCCACCAGGATaGGCAGGTAGAGGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: AKRARVNHSYVSETLGIFRSPPG*AGRGGE Trigger: TTCTCCTCCTCTACCTGCTCATCCTGGTGGGGAACG...GAAAATCCCCAGTGTTTCTGACACGTAGCTGTGATTCACTCTTGCCCTCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | ATGCCGGGGCAGCTTAGGGAGTCAGCCATTCCCACTGTTCCCCTGAGAGGTGTTCTCTTTGGATCCTGGTaGCACATCATTTTAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: MPGQLRESAIPTVPLRGVLFGSW*HIILVM Trigger: CATCACTAAAATGATGTGTCACCAGGATCCAAAGAG...AACACCTCTCAGGGGAACAGTGGGAATGGCTGACTCCCTAAGCTGCCCCGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CCA 90 bp | TGGAAGCTCACAACTAGCTGTAGCTCCAATTCCAGGGGATCTGGCACCTCCATATGCAGTGTTTGTCTGTaGGGTCATGTGGACGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: WKLTTSCSSNSRGSGTSICSVCL*GHVDGV Trigger: TACCCCGTCCACATGACCCCACAGACAAACACTGCA...TATGGAGGTGCCAGATCCCCTGGAATTGGAGCTACAGCTAGTTGTGAGCTTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CCA 90 bp | ATGCCGGGGCAGCTTAGGGAGTCAGCCATTCCCACTGTTCCCCTGAGAGGTGTTCTTTCCAATACTCTTTaGATCCTGGTGACACATCAT | + |
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Preference number: 4 (lower is better) Translates to: MPGQLRESAIPTVPLRGVLSNTL*ILVTHH Trigger: ATGATGTGTCACCAGGATCCAAAGAGTATTGGAAAG...AACACCTCTCAGGGGAACAGTGGGAATGGCTGACTCCCTAAGCTGCCCCGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| 3UTR CAA 72 bp | AAGGGAAGTCTTCAGCTGAGATTCCCCCTTCATGGGTaGGGTGTGTTGAGGTTTGTGTCAAGCCACACTGAG | + |
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Preference number: 4 (lower is better) Translates to: KGSLQLRFPLHG*GVLRFVSSHTE Trigger: CTCAGTGTGGCTTGACACAAACCTCAACACACCCAACCCATGAAGGGGGAATCTCAGCTGAAGACTTCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | TGGAAGCTCACAACTAGCTGTAGCTCCAATTCCAGGGGATCTGGCACCTCCATAAGTCTGAGAGTTCCCTaGCCCATTACAGGCTATGTT | + |
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Preference number: 4 (lower is better) Translates to: WKLTTSCSSNSRGSGTSISLRVP*PITGYV Trigger: AACATAGCCTGTAATGGGTCAGGGAACTCTCAGACT...TATGGAGGTGCCAGATCCCCTGGAATTGGAGCTACAGCTAGTTGTGAGCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | AGCTTCTGCAAAGAGGGCAAGAGTGAATCACAGCTACGTGTCAGAAACACTGGGAGTCTGAGAGTTCCCTaGCCCATTACAGGCTATGTT | + |
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Preference number: 4 (lower is better) Translates to: SFCKEGKSESQLRVRNTGSLRVP*PITGYV Trigger: AACATAGCCTGTAATGGGTCAGGGAACTCTCAGACT...CCCAGTGTTTCTGACACGTAGCTGTGATTCACTCTTGCCCTCTTTGCAGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTGTTCAGTCCCTGGATGAACAGAACAGGTATTTAGAAGTTGGCTCAGTGAAGCCCATGAGTGTCTaGGGAGTGGTGTCTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TFVQSLDEQNRYLEVGSVKPMSV*GVVSEQ Trigger: CTGCTCAGACACCACTCCCCAGACACTCATGGGCTT...CACTGAGCCAACTTCTAAATACCTGTTCTGTTCATCCAGGGACTGAACAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | GAATGGTTACAGATAGGATTGGCAGAAACTCCAGATATCGGAATGAGAATACAACGTTCCCCACCAGGATaGGCAGGTAGAGGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: EWLQIGLAETPDIGMRIQRSPPG*AGRGGE Trigger: TTCTCCTCCTCTACCTGCTCATCCTGGTGGGGAACG...TTGTATTCTCATTCCGATATCTGGAGTTTCTGCCAATCCTATCTGTAACCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CCA 90 bp | TTTACAGTTTACATTGAGGGAATCCAAGGGAGAGATATAAGGAAGGAACCTGGATGCAGTGTTTGTCTGTaGGGTCATGTGGACGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FTVYIEGIQGRDIRKEPGCSVCL*GHVDGV Trigger: TACCCCGTCCACATGACCCCACAGACAAACACTGCA...TCCAGGTTCCTTCCTTATATCTCTCCCTTGGATTCCCTCAATGTAAACTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | TCCAGCACCCAGATCCCCCATCTCTTACACCTAAATACTTTATATACTTTTGTTAGACTACATTCCCCATaGTGTGGAAGTCCAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SSTQIPHLLHLNTLYTFVRLHSP*CGSPRV Trigger: TACCCTTGGACTTCCACATCATGGGGAATGTAGTCT...AACAAAAGTATATAAAGTATTTAGGTGTAAGAGATGGGGGATCTGGGTGCTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR TCA 90 bp | TGGTTTACAGTTTACATTGAGGGAATCCAAGGGAGAGATATAAGGAAGGAACCTCTCTTTGGATCCTGGTaGCACATCATTTTAGTGATG | + |
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Preference number: 4 (lower is better) Translates to: WFTVYIEGIQGRDIRKEPLFGSW*HIILVM Trigger: CATCACTAAAATGATGTGTCACCAGGATCCAAAGAG...AGGTTCCTTCCTTATATCTCTCCCTTGGATTCCCTCAATGTAAACTGTAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CCA 90 bp | TCCAGCACCCAGATCCCCCATCTCTTACACCTAAATACTTTATATACTTTTGTTTTGTCAAACGCCATCTaGGAAGTCTGTATCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: SSTQIPHLLHLNTLYTFVLSNAI*EVCITA Trigger: AGCAGTGATACAGACTTCCCAGATGGCGTTTGACAA...AACAAAAGTATATAAAGTATTTAGGTGTAAGAGATGGGGGATCTGGGTGCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CAA 90 bp | ACTTTTGTTCAGTCCCTGGATGAACAGAACAGGTATTTAGAAGTTGGCTCAGTGTTAGTGATGGCCGACTaGACATCTTTGTTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: TFVQSLDEQNRYLEVGSVLVMAD*TSLFLR Trigger: CCTGAGGAACAAAGATGTCAAGTCGGCCATCACTAA...CACTGAGCCAACTTCTAAATACCTGTTCTGTTCATCCAGGGACTGAACAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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| CDS-3UTR CAA 90 bp | TGGTTTACAGTTTACATTGAGGGAATCCAAGGGAGAGATATAAGGAAGGAACCTTTAGTGATGGCCGACTaGACATCTTTGTTCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: WFTVYIEGIQGRDIRKEPLVMAD*TSLFLR Trigger: CCTGAGGAACAAAGATGTCAAGTCGGCCATCACTAA...AGGTTCCTTCCTTATATCTCTCCCTTGGATTCCCTCAATGTAAACTGTAAACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000219663.2 ENSMUST00000220001.2 |
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