Pregenerated sensors for OLFR52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075199Ensembl transcript IDs: ENSMUST00000215138.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCTCGGTACGATATTATAAGACAAAGAGCCTCCAAAGATGCTGCTaGGTTCATTTCTGTTGGCCAACTATGGCTACCCTTAAGCGTGAT | + |
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Preference number: 1 (lower is better) Translates to: ASVRYYKTKSLQRCC*VHFCWPTMATLKRD Trigger: ATCACGCTTAAGGGTAGCCATAGTTGGCCAACAGAAATGAACTCAGCAGCATCTTTGGAGGCTCTTTGTCTTATAATATCGTACCGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 90 bp | GTGGAGCCTTCCTCCACCCTATGTAATCACTCTATGATCACTCTATaGTTGTTCAGCCACTGTTGCCTTTACTCTTCAAGATACTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: VEPSSTLCNHSMITL*LFSHCCLYSSRYCN Trigger: GTTGCAGTATCTTGAAGAGTAAAGGCAACAGTGGCTGAACAATCATAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 90 bp | CCCAGTGAGACTCACTTGGACAGAACTATTGTTTTCATTTGCAAGTaGTTATCTGTTGGAGATAGCTTCCAGGTTTGGGATAGGGCGTGT | + |
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Preference number: 1 (lower is better) Translates to: PSETHLDRTIVFICK*LSVGDSFQVWDRAC Trigger: ACACGCCCTATCCCAAACCTGGAAGCTATCTCCAACAGATAATCACTTGCAAATGAAAACAATAGTTCTGTCCAAGTGAGTCTCACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 90 bp | GATTACCTAAGGTGGAGCCTTCCTCCACCCTATGTAATCACTCTATaGTCACTCTATGATTGTTCAGCCACTGTTGCCTTTACTCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: DYLRWSLPPPYVITL*SLYDCSATVAFTLQ Trigger: TTGAAGAGTAAAGGCAACAGTGGCTGAACAATCATAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCACCTTAGGTAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 90 bp | TGTTGGCCAACTATGGCTACCCTTAAGCGTGATTTGTTTCCCCAGTaGGACTCACTTGGACAGAACTATTGTTTTCATTTGCAAGTGATT | + |
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Preference number: 1 (lower is better) Translates to: CWPTMATLKRDLFPQ*DSLGQNYCFHLQVI Trigger: AATCACTTGCAAATGAAAACAATAGTTCTGTCCAAGTGAGTCTCACTGGGGAAACAAATCACGCTTAAGGGTAGCCATAGTTGGCCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 90 bp | CTTCTTGTTTTGTGTTCTTATGGGACATCGGAGCATGAATATGAGTaGGTATCTGCATATATATCTGCTTCTTTTGACTTCTTGGGCATT | + |
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Preference number: 1 (lower is better) Translates to: LLVLCSYGTSEHEYE*VSAYISASFDFLGI Trigger: AATGCCCAAGAAGTCAAAAGAAGCAGATATATATGCAGATACTCACTCATATTCATGCTCCGATGTCCCATAAGAACACAAAACAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR GCA 90 bp | TCCTGTTTCTTTTTCCGTAGGGGGTCTCTGAGTCCTGAGTGGAAGGATTTGGTACTGCACATAGTCACCTaGAGCTGTTTCCAGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SCFFFRRGSLSPEWKDLVLHIVT*SCFQAP Trigger: TGGAGCCTGGAAACAGCTGCAGGTGACTATGTGCAG...TACCAAATCCTTCCACTCAGGACTCAGAGACCCCCTACGGAAAAAGAAACAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAATTCTCTTTCCTTTTTGTAACCTCCCCCTCAGCCTGAATGAAGCAGGCGGGAGGAGTCAAGGGTaGGGAAACTGCAATCGAAGC | + |
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Preference number: 2 (lower is better) Translates to: FVILFPFCNLPLSLNEAGGRSQG*GNCNRS Trigger: GCTTCGATTGCAGTTTCCTCACCCTTGACTCCTCCC...GCCTGCTTCATTCAGGCTGAGGGGGAGGTTACAAAAAGGAAAGAGAATTACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR CCA 90 bp | TTACCTAAGGTGGAGCCTTCCTCCACCCTATGTAATCACTCTATGATCACTCTAGAAATGGGGAAGAATTaGGAGGAGTCAAGGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPKVEPSSTLCNHSMITLEMGKN*EESRVR Trigger: CCTCACCCTTGACTCCTCCCAATTCTTCCCCATTTC...TAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCACCTTAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CAA 90 bp | CTCACTTGGACAGAACTATTGTTTTCATTTGCAAGTGATTATCTGTaGGAGATAGCTTCCAGGTTTGGGATAGGGCGTGTGTCTAATATT | + |
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Preference number: 2 (lower is better) Translates to: LTWTELLFSFASDYL*EIASRFGIGRVSNI Trigger: AATATTAGACACACGCCCTATCCCAAACCTGGAAGCTATCTCCAACAGATAATCACTTGCAAATGAAAACAATAGTTCTGTCCAAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR CCA 90 bp | TTGTTTATAAGCAGGATCCCCATTAAACCTTTGAGCGTTGAACAAACTAGCTTGCTTCTTTTGACTTCTTaGGCATTTTTCCTCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: LFISRIPIKPLSVEQTSLLLLTS*AFFLMF Trigger: GAACATGAGGAAAAATGCCCAAGAAGTCAAAAGAAG...CAAGCTAGTTTGTTCAACGCTCAAAGGTTTAATGGGGATCCTGCTTATAAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CAA 90 bp | ATTCTCTTTCTTACACTACAGGTTTTATGTATATGTTCTAGCTTCTaGTTTTGTGTTCTTATGGGACATCGGAGCATGAATATGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: ILFLTLQVLCICSSF*FCVLMGHRSMNMSE Trigger: CTCACTCATATTCATGCTCCGATGTCCCATAAGAACACAAAACAAGAAGCTAGAACATATACATAAAACCTGTAGTGTAAGAAAGAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTaGCTCTGCTTCCCGAGTACTGGGATTAAAGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRTQKSA*LCFPSTGIKGV Trigger: CACGCCTTTAATCCCAGTACTCGGGAAGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CCA 72 bp | ACCTGCAGCTGTTTCCAGGCTCCAAGAATGAACCAGTaGGGGGATGGGCCTCCCCCTCTTGTTTATAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: TCSCFQAPRMNQ*GDGPPPLVYKQ Trigger: CTGCTTATAAACAAGAGGGGGAGGCCCATCCCCCCACTGGTTCATTCTTGGAGCCTGGAAACAGCTGCAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR CAA 90 bp | TTACCTAAGGTGGAGCCTTCCTCCACCCTATGTAATCACTCTATGATCACTCTACTCTTTCAGCTCCGATaGCCTCCCAGGCTTGAACCC | + |
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Preference number: 3 (lower is better) Translates to: LPKVEPSSTLCNHSMITLLFQLR*PPRLEP Trigger: GGGTTCAAGCCTGGGAGGCAATCGGAGCTGAAAGAG...TAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCACCTTAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 72 bp | AGGTGGAGCCTTCCTCCACCCTATGTAATCACTCTATaGTCACTCTATGATTGTTCAGCCACTGTTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: RWSLPPPYVITL*SLYDCSATVAF Trigger: AAAGGCAACAGTGGCTGAACAATCATAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CCA 72 bp | AAAGATGCTGCTGAGTTCATTTCTGTTGGCCAACTATaGCTACCCTTAAGCGTGATTTGTTTCCCCAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: KDAAEFISVGQL*LPLSVICFPSE Trigger: CTCACTGGGGAAACAAATCACGCTTAAGGGTAGCCATAGTTGGCCAACAGAAATGAACTCAGCAGCATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR CAA 90 bp | TGTCTAATATTTCTTTCAGCACTAGGACCCCATCTGGTGCAGAACCTTCACACATGTGTGCCAGCTCTTTaGTGCCTAGAAAGCTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: CLIFLSALGPHLVQNLHTCVPAL*CLESFV Trigger: AACAAAGCTTTCTAGGCACAAAAGAGCTGGCACACA...TGTGTGAAGGTTCTGCACCAGATGGGGTCCTAGTGCTGAAAGAAATATTAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 72 bp | GAGGGGAAATGGGGAAGAATTGGGAGGAGTCAAGGGTaGGGAAACTGCAATCGAAGCATATTGTATGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: EGKWGRIGRSQG*GNCNRSILYEK Trigger: TTTTTCATACAATATGCTTCGATTGCAGTTTCCTCACCCTTGACTCCTCCCAATTCTTCCCCATTTCCCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 72 bp | TCCTCCACCCTATGTAATCACTCTATGATCACTCTATaGTTGTTCAGCCACTGTTGCCTTTACTCTTCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SSTLCNHSMITL*LFSHCCLYSSR Trigger: TCTTGAAGAGTAAAGGCAACAGTGGCTGAACAATCATAGAGTGATCATAGAGTGATTACATAGGGTGGAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 72 bp | ACTATGGCTACCCTTAAGCGTGATTTGTTTCCCCAGTaGGACTCACTTGGACAGAACTATTGTTTTCATTTG | + |
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Preference number: 3 (lower is better) Translates to: TMATLKRDLFPQ*DSLGQNYCFHL Trigger: CAAATGAAAACAATAGTTCTGTCCAAGTGAGTCTCACTGGGGAAACAAATCACGCTTAAGGGTAGCCATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCTTGTTTTGTGTTCTTATGGGACATCGGAGCATGAATATGAGTGAGTATGCTTCTTTTGACTTCTaGGGCATTTTTCCTCATGTT | + |
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Preference number: 3 (lower is better) Translates to: SFLFCVLMGHRSMNMSEYASFDF*GIFPHV Trigger: AACATGAGGAAAAATGCCCAAGAAGTCAAAAGAAGC...ATACTCACTCATATTCATGCTCCGATGTCCCATAAGAACACAAAACAAGAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR TCA 72 bp | ACTCACTTGGACAGAACTATTGTTTTCATTTGCAAGTaGTTATCTGTTGGAGATAGCTTCCAGGTTTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: THLDRTIVFICK*LSVGDSFQVWD Trigger: ATCCCAAACCTGGAAGCTATCTCCAACAGATAATCACTTGCAAATGAAAACAATAGTTCTGTCCAAGTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR-3UTR CAA 90 bp | TTATGTATATGTTCTAGCTTCTTGTTTTGTGTTCTTATGGGACATCGGAGCATGCTCTTTGTTGCTTGTTaGTGTTCTAATGAGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: LCICSSFLFCVLMGHRSMLFVAC*CSNERQ Trigger: CTGTCTCTCATTAGAACACAAACAAGCAACAAAGAG...CATGCTCCGATGTCCCATAAGAACACAAAACAAGAAGCTAGAACATATACATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR TCA 90 bp | CTTCTCTTTCAGCTCCGATTGCCTCCCAGGCTTGAACCCAGATATGAGAGTCACCCGTCTTCCTTCAGCTaGGCGCATCCTCAGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LLFQLRLPPRLEPRYESHPSSFS*AHPQNG Trigger: GCCATTCTGAGGATGCGCTCAGCTGAAGGAAGACGG...GTGACTCTCATATCTGGGTTCAAGCCTGGGAGGCAATCGGAGCTGAAAGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR TCA 90 bp | CTTCTCTTTCAGCTCCGATTGCCTCCCAGGCTTGAACCCAGATATGAGAGTCACTGTGAATCAATGCCATaGGGAAACTATAGCTATAGG | + |
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Preference number: 4 (lower is better) Translates to: LLFQLRLPPRLEPRYESHCESMP*GNYSYR Trigger: CCTATAGCTATAGTTTCCTCATGGCATTGATTCACA...GTGACTCTCATATCTGGGTTCAAGCCTGGGAGGCAATCGGAGCTGAAAGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR TCA 90 bp | TTTGTAATTCTCTTTCCTTTTTGTAACCTCCCCCTCAGCCTGAATGAAGCAGGCCTGAGCAAGTTAGCCTaGGAAGAGGCATGTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: FVILFPFCNLPLSLNEAGLSKLA*EEACHH Trigger: GTGATGACATGCCTCTTCTCAGGCTAACTTGCTCAG...GCCTGCTTCATTCAGGCTGAGGGGGAGGTTACAAAAAGGAAAGAGAATTACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR TCA 90 bp | TTTGTAATTCTCTTTCCTTTTTGTAACCTCCCCCTCAGCCTGAATGAAGCAGGCCTCACTGCCATCATGTaGGAGCTACAGGTGGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: FVILFPFCNLPLSLNEAGLTAIM*ELQVEK Trigger: CTTTTCCACCTGTAGCTCTCACATGATGGCAGTGAG...GCCTGCTTCATTCAGGCTGAGGGGGAGGTTACAAAAAGGAAAGAGAATTACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR TCA 90 bp | TGTCTAATATTTCTTTCAGCACTAGGACCCCATCTGGTGCAGAACCTTCACACAGGTTTCTATTGTCCATaGCCCTCTTCAGGGCATCTT | + |
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Preference number: 4 (lower is better) Translates to: CLIFLSALGPHLVQNLHTGFYCP*PSSGHL Trigger: AAGATGCCCTGAAGAGGGTCATGGACAATAGAAACC...TGTGTGAAGGTTCTGCACCAGATGGGGTCCTAGTGCTGAAAGAAATATTAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR GCA 90 bp | GAAATGGGGAAGAATTGGGAGGAGTCAAGGGTGAGGAAACTGCAATCGAAGCATTGCATATCTATCATATaGCATGGAAGCCAGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: EMGKNWEESRVRKLQSKHCISII*HGSQEQ Trigger: TTGCTCCTGGCTTCCATGGCATATGATAGATATGCA...ATGCTTCGATTGCAGTTTCCTCACCCTTGACTCCTCCCAATTCTTCCCCATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR CCA 90 bp | TTACCTAAGGTGGAGCCTTCCTCCACCCTATGTAATCACTCTATGATCACTCTAAGAAAGCAGCCTAACTaGGCAGCACATGCATTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LPKVEPSSTLCNHSMITLRKQPN*AAHALK Trigger: CTTCAATGCATGTGCTGCCCAGTTAGGCTGCTTTCT...TAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCACCTTAGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR CCA 90 bp | GAAATGGGGAAGAATTGGGAGGAGTCAAGGGTGAGGAAACTGCAATCGAAGCATCTAAATATAGAAGTCTaGTTTCTATTGTCCATGACC | + |
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Preference number: 4 (lower is better) Translates to: EMGKNWEESRVRKLQSKHLNIEV*FLLSMT Trigger: GGTCATGGACAATAGAAACCAGACTTCTATATTTAG...ATGCTTCGATTGCAGTTTCCTCACCCTTGACTCCTCCCAATTCTTCCCCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CAA 72 bp | ACAGAACTATTGTTTTCATTTGCAAGTGATTATCTGTaGGAGATAGCTTCCAGGTTTGGGATAGGGCGTGTG | + |
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Preference number: 4 (lower is better) Translates to: TELLFSFASDYL*EIASRFGIGRV Trigger: CACACGCCCTATCCCAAACCTGGAAGCTATCTCCAACAGATAATCACTTGCAAATGAAAACAATAGTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR TCA 90 bp | GTAAATATGTGTGCCAGCTCTTTTGTGCCTAGAAAGCTTTGTTTACTTGGAATTGGGCAGCACATGCATTaGAGGATATGGCATTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VNMCASSFVPRKLCLLGIGQHMH*RIWHFC Trigger: GCAAAAATGCCATATCCTTCAATGCATGTGCTGCCC...AATTCCAAGTAAACAAAGCTTTCTAGGCACAAAAGAGCTGGCACACATATTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR GCA 90 bp | TGTCTAATATTTCTTTCAGCACTAGGACCCCATCTGGTGCAGAACCTTCACACAAAGAGTGTGAATCAATaGCATGAGGAAACTATAGCT | + |
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Preference number: 4 (lower is better) Translates to: CLIFLSALGPHLVQNLHTKSVNQ*HEETIA Trigger: AGCTATAGTTTCCTCATGGCATTGATTCACACTCTT...TGTGTGAAGGTTCTGCACCAGATGGGGTCCTAGTGCTGAAAGAAATATTAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR GCA 90 bp | TTATGTATATGTTCTAGCTTCTTGTTTTGTGTTCTTATGGGACATCGGAGCATGGGGTGTGTTGAGTCTTaGATCTGTTCTAATGACCAA | + |
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Preference number: 4 (lower is better) Translates to: LCICSSFLFCVLMGHRSMGCVES*ICSNDQ Trigger: TTGGTCATTAGAACAGATGCAAGACTCAACACACCC...CATGCTCCGATGTCCCATAAGAACACAAAACAAGAAGCTAGAACATATACATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CAA 72 bp | TATTTAATTTCCCATCATTATCTCTTTGTTGCTTGTTaGTGTTCTAATGAGAGACAGACATGGGGTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: YLISHHYLFVAC*CSNERQTWGCP Trigger: GGGGCAACCCCATGTCTGTCTCTCATTAGAACACAAACAAGCAACAAAGAGATAATGATGGGAAATTAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CAA 72 bp | TTTGTTTCCCCAGTGAGACTCACTTGGACAGAACTATaGTTTTCATTTGCAAGTGATTATCTGTTGGAGATA | + |
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Preference number: 4 (lower is better) Translates to: FVSPVRLTWTEL*FSFASDYLLEI Trigger: TATCTCCAACAGATAATCACTTGCAAATGAAAACAATAGTTCTGTCCAAGTGAGTCTCACTGGGGAAACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| 3UTR CAA 72 bp | CTTACACTACAGGTTTTATGTATATGTTCTAGCTTCTaGTTTTGTGTTCTTATGGGACATCGGAGCATGAAT | + |
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Preference number: 4 (lower is better) Translates to: LTLQVLCICSSF*FCVLMGHRSMN Trigger: ATTCATGCTCCGATGTCCCATAAGAACACAAAACAAGAAGCTAGAACATATACATAAAACCTGTAGTGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR CAA 90 bp | TTTGTAATTCTCTTTCCTTTTTGTAACCTCCCCCTCAGCCTGAATGAAGCAGGCTGGGCAGCACATGCATaGAAGGATATGGCATTTTTG | + |
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Preference number: 5 (lower is better) Translates to: FVILFPFCNLPLSLNEAGWAAHA*KDMAFL Trigger: CAAAAATGCCATATCCTTCAATGCATGTGCTGCCCA...GCCTGCTTCATTCAGGCTGAGGGGGAGGTTACAAAAAGGAAAGAGAATTACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR CAA 90 bp | TTACCTAAGGTGGAGCCTTCCTCCACCCTATGTAATCACTCTATGATCACTCTAAAGATCAATCCCAGATaGCCTATTGCTGTGAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LPKVEPSSTLCNHSMITLKINPR*PIAVKR Trigger: TCTTTTCACAGCAATAGGCAATCTGGGATTGATCTT...TAGAGTGATCATAGAGTGATTACATAGGGTGGAGGAAGGCTCCACCTTAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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| CDS-3UTR CAA 90 bp | TTATGTATATGTTCTAGCTTCTTGTTTTGTGTTCTTATGGGACATCGGAGCATGGAAGTCTGGTTTCTATaGTCCATGACCCTCTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LCICSSFLFCVLMGHRSMEVWFL*SMTLFR Trigger: CCTGAAGAGGGTCATGGACAATAGAAACCAGACTTC...CATGCTCCGATGTCCCATAAGAACACAAAACAAGAAGCTAGAACATATACATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215138.3 |
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