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Pregenerated sensors for OLFR518 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000046431

Ensembl transcript IDs: ENSMUST00000059617.2, ENSMUST00000217803.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp AGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTaGCACACGCCTTTATCCCAGCACTTGGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: SLKTIDYKSGQW*HTPLSQHLGGR
Trigger: TCTGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR TCA 90 bp ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCATCTGGTCCAGGAGGATaGCAGCAACAATGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TTNLGNGGTRLYPSTWEASGPGG*QQQWWH
Trigger: ATGCCACCATTGTTGCTGTCATCCTCCTGGACCAGA...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CCA 90 bp ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCACCAAACATCTGCCCTTaGAGTTCAGGGAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TTNLGNGGTRLYPSTWEAPNICP*SSGKAE
Trigger: TTCTGCCTTCCCTGAACTCCAAGGGCAGATGTTTGG...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR TCA 90 bp ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCATCAAAATGGTGCCTGTaGAGGCGTAGACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: TTNLGNGGTRLYPSTWEASKWCL*RRRLQT
Trigger: TGTTTGAAGTCTACGCCTTCACAGGCACCATTTTGA...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR TCA 90 bp CAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGTGACAGAGGTGAGATaGGAGGCACACGTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QLTTNLGNGGTRLYPSTWVTEVR*EAHVEK
Trigger: CTTTTCTACGTGTGCCTCTCATCTCACCTCTGTCAC...CCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CCA 90 bp AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTCTCTTGTTGCTGCAGTaGAGCCCCGAGCTGCTCTTA +
Preference number: 4 (lower is better)
Translates to: KQLTTNLGNGGTRLYPSTLLLLQ*SPELLL
Trigger: TAAGAGCAGCTCGGGGCTCCACTGCAGCAACAAGAG...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CCA 90 bp CTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCAGGTGAGTACCTGGATTTaGGCTGTAGATACGTTATAC +
Preference number: 4 (lower is better)
Translates to: LQIWAMVAHAFIPALGRQVSTWI*AVDTLY
Trigger: GTATAACGTATCTACAGCCCAAATCCAGGTACTCAC...CTGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR GCA 90 bp AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTACAGAGCTGTCATTCTaGCCTCTTGTTGCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KQLTTNLGNGGTRLYPSTTELSF*PLVAAV
Trigger: CACTGCAGCAACAAGAGGGCAGAATGACAGCTCTGT...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR GCA 90 bp AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTAACACCCATGTGGTCTaGACAGTAGCCACCATGATC +
Preference number: 4 (lower is better)
Translates to: KQLTTNLGNGGTRLYPSTNTHVV*TVATMI
Trigger: GATCATGGTGGCTACTGTGCAGACCACATGGGTGTT...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CCA 90 bp AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTGTCTCACAGAAGAGATaGTTAATCTCCTTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: KQLTTNLGNGGTRLYPSTVSQKR*LISLWS
Trigger: TGACCACAAGGAGATTAACCATCTCTTCTGTGAGAC...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR TCA 90 bp TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGAAAAGCCCAGGAGGATaGATTCGGCCACAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FRSIYSLKTIDYKSGQWWKSPGG*IRPQSC
Trigger: ACAGCTCTGTGGCCGAATTCATCCTCCTGGGCTTTT...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR TCA 90 bp TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGGATTCAGCAGAGGTGTaGGAAGTGTGTATGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FRSIYSLKTIDYKSGQWWDSAEV*EVCMPV
Trigger: CACTGGCATACACACTTCTCACACCTCTGCTGAATC...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR GCA 90 bp TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGAAAGCCCCAAACATCTaGCCTTGGAGTTCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: FRSIYSLKTIDYKSGQWWKAPNI*PWSSGK
Trigger: CTTCCCTGAACTCCAAGGGCAGATGTTTGGGGCTTT...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR GCA 90 bp TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGCCCAAAGGAAATGGTTaGTTTCTCGCTGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: FRSIYSLKTIDYKSGQWWPKGNG*FLAGKD
Trigger: GTCCTTACCAGCGAGAAAGCAACCATTTCCTTTGGG...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CAA 90 bp ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCACCCAAACATCTGCCCTaGGAGTTCAGGGAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TTNLGNGGTRLYPSTWEAPKHLP*EFREGR
Trigger: TCTGCCTTCCCTGAACTCCAAGGGCAGATGTTTGGG...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CAA 90 bp AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGTCATTCTGCCCTCTaGTTGCTGCAGTGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: KQLTTNLGNGGTRLYPSTCHSAL*LLQWSP
Trigger: GGGGCTCCACTGCAGCAACAAGAGGGCAGAATGACA...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS-3UTR CAA 90 bp TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGCATTCTGCCCTCTTGTaGCTGCAGTGGAGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: FRSIYSLKTIDYKSGQWWHSALL*LQWSPE
Trigger: CTCGGGGCTCCACTGCAGCAACAAGAGGGCAGAATG...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217803.2
CDS CAA 90 bp TTCAGCAGAGGTGTGAGAAGTGTGTATGCCAGTGACATCAGTTTCTaGGTGTCTGGTGAGTACCTGGATTTGGGCTGTAGATACGTTATA +
Preference number: 6 (lower is better)
Translates to: FSRGVRSVYASDISF*VSGEYLDLGCRYVI
Trigger: TATAACGTATCTACAGCCCAAATCCAGGTACTCACCAGACACCAAGAAACTGATGTCACTGGCATACACACTTCTCACACCTCTGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000059617.2
ENSMUST00000217803.2
CDS GCA 72 bp ACAGATAAATTTTGCAGAAACAGATACATGGGGATGTaGAAGCTCTGGTCCAGGAGGATGACAGCAACAATG +
Preference number: 6 (lower is better)
Translates to: TDKFCRNRYMGM*KLWSRRMTATM
Trigger: CATTGTTGCTGTCATCCTCCTGGACCAGAGCTTGCACATCCCCATGTATCTGTTTCTGCAAAATTTATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000059617.2
ENSMUST00000217803.2