Pregenerated sensors for OLFR518 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046431Ensembl transcript IDs: ENSMUST00000059617.2, ENSMUST00000217803.2
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 72 bp | AGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTaGCACACGCCTTTATCCCAGCACTTGGGAGGCAGA | + |
Preference number: 3 (lower is better) Translates to: SLKTIDYKSGQW*HTPLSQHLGGR Trigger: TCTGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR TCA 90 bp | ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCATCTGGTCCAGGAGGATaGCAGCAACAATGGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: TTNLGNGGTRLYPSTWEASGPGG*QQQWWH Trigger: ATGCCACCATTGTTGCTGTCATCCTCCTGGACCAGA...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CCA 90 bp | ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCACCAAACATCTGCCCTTaGAGTTCAGGGAAGGCAGAA | + |
Preference number: 4 (lower is better) Translates to: TTNLGNGGTRLYPSTWEAPNICP*SSGKAE Trigger: TTCTGCCTTCCCTGAACTCCAAGGGCAGATGTTTGG...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR TCA 90 bp | ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCATCAAAATGGTGCCTGTaGAGGCGTAGACTTCAAACA | + |
Preference number: 4 (lower is better) Translates to: TTNLGNGGTRLYPSTWEASKWCL*RRRLQT Trigger: TGTTTGAAGTCTACGCCTTCACAGGCACCATTTTGA...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR TCA 90 bp | CAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGTGACAGAGGTGAGATaGGAGGCACACGTAGAAAAG | + |
Preference number: 4 (lower is better) Translates to: QLTTNLGNGGTRLYPSTWVTEVR*EAHVEK Trigger: CTTTTCTACGTGTGCCTCTCATCTCACCTCTGTCAC...CCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CCA 90 bp | AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTCTCTTGTTGCTGCAGTaGAGCCCCGAGCTGCTCTTA | + |
Preference number: 4 (lower is better) Translates to: KQLTTNLGNGGTRLYPSTLLLLQ*SPELLL Trigger: TAAGAGCAGCTCGGGGCTCCACTGCAGCAACAAGAG...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CCA 90 bp | CTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCAGGTGAGTACCTGGATTTaGGCTGTAGATACGTTATAC | + |
Preference number: 4 (lower is better) Translates to: LQIWAMVAHAFIPALGRQVSTWI*AVDTLY Trigger: GTATAACGTATCTACAGCCCAAATCCAGGTACTCAC...CTGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR GCA 90 bp | AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTACAGAGCTGTCATTCTaGCCTCTTGTTGCTGCAGTG | + |
Preference number: 4 (lower is better) Translates to: KQLTTNLGNGGTRLYPSTTELSF*PLVAAV Trigger: CACTGCAGCAACAAGAGGGCAGAATGACAGCTCTGT...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR GCA 90 bp | AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTAACACCCATGTGGTCTaGACAGTAGCCACCATGATC | + |
Preference number: 4 (lower is better) Translates to: KQLTTNLGNGGTRLYPSTNTHVV*TVATMI Trigger: GATCATGGTGGCTACTGTGCAGACCACATGGGTGTT...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CCA 90 bp | AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTGTCTCACAGAAGAGATaGTTAATCTCCTTGTGGTCA | + |
Preference number: 4 (lower is better) Translates to: KQLTTNLGNGGTRLYPSTVSQKR*LISLWS Trigger: TGACCACAAGGAGATTAACCATCTCTTCTGTGAGAC...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR TCA 90 bp | TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGAAAAGCCCAGGAGGATaGATTCGGCCACAGAGCTGT | + |
Preference number: 4 (lower is better) Translates to: FRSIYSLKTIDYKSGQWWKSPGG*IRPQSC Trigger: ACAGCTCTGTGGCCGAATTCATCCTCCTGGGCTTTT...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR TCA 90 bp | TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGGATTCAGCAGAGGTGTaGGAAGTGTGTATGCCAGTG | + |
Preference number: 4 (lower is better) Translates to: FRSIYSLKTIDYKSGQWWDSAEV*EVCMPV Trigger: CACTGGCATACACACTTCTCACACCTCTGCTGAATC...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR GCA 90 bp | TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGAAAGCCCCAAACATCTaGCCTTGGAGTTCAGGGAAG | + |
Preference number: 4 (lower is better) Translates to: FRSIYSLKTIDYKSGQWWKAPNI*PWSSGK Trigger: CTTCCCTGAACTCCAAGGGCAGATGTTTGGGGCTTT...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR GCA 90 bp | TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGCCCAAAGGAAATGGTTaGTTTCTCGCTGGTAAGGAC | + |
Preference number: 4 (lower is better) Translates to: FRSIYSLKTIDYKSGQWWPKGNG*FLAGKD Trigger: GTCCTTACCAGCGAGAAAGCAACCATTTCCTTTGGG...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CAA 90 bp | ACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGGGAGGCACCCAAACATCTGCCCTaGGAGTTCAGGGAAGGCAGA | + |
Preference number: 5 (lower is better) Translates to: TTNLGNGGTRLYPSTWEAPKHLP*EFREGR Trigger: TCTGCCTTCCCTGAACTCCAAGGGCAGATGTTTGGG...TGCCTCCCAAGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CAA 90 bp | AAACAATTGACTACAAATCTGGGCAATGGTGGCACACGCCTTTATCCCAGCACTTGTCATTCTGCCCTCTaGTTGCTGCAGTGGAGCCCC | + |
Preference number: 5 (lower is better) Translates to: KQLTTNLGNGGTRLYPSTCHSAL*LLQWSP Trigger: GGGGCTCCACTGCAGCAACAAGAGGGCAGAATGACA...AGTGCTGGGATAAAGGCGTGTGCCACCATTGCCCAGATTTGTAGTCAATTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS-3UTR CAA 90 bp | TTCAGAAGTATATACAGCTTAAAAACAATTGACTACAAATCTGGGCAATGGTGGCATTCTGCCCTCTTGTaGCTGCAGTGGAGCCCCGAG | + |
Preference number: 5 (lower is better) Translates to: FRSIYSLKTIDYKSGQWWHSALL*LQWSPE Trigger: CTCGGGGCTCCACTGCAGCAACAAGAGGGCAGAATG...CCACCATTGCCCAGATTTGTAGTCAATTGTTTTTAAGCTGTATATACTTCTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217803.2 |
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CDS CAA 90 bp | TTCAGCAGAGGTGTGAGAAGTGTGTATGCCAGTGACATCAGTTTCTaGGTGTCTGGTGAGTACCTGGATTTGGGCTGTAGATACGTTATA | + |
Preference number: 6 (lower is better) Translates to: FSRGVRSVYASDISF*VSGEYLDLGCRYVI Trigger: TATAACGTATCTACAGCCCAAATCCAGGTACTCACCAGACACCAAGAAACTGATGTCACTGGCATACACACTTCTCACACCTCTGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059617.2 ENSMUST00000217803.2 |
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CDS GCA 72 bp | ACAGATAAATTTTGCAGAAACAGATACATGGGGATGTaGAAGCTCTGGTCCAGGAGGATGACAGCAACAATG | + |
Preference number: 6 (lower is better) Translates to: TDKFCRNRYMGM*KLWSRRMTATM Trigger: CATTGTTGCTGTCATCCTCCTGGACCAGAGCTTGCACATCCCCATGTATCTGTTTCTGCAAAATTTATCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059617.2 ENSMUST00000217803.2 |