Pregenerated sensors for OLFR510 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096209Ensembl transcript IDs: ENSMUST00000076289.2, ENSMUST00000213979.3, ENSMUST00000216331.2, ENSMUST00000217170.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTATCCAGCTGGAGCCATGGGTCCCCCGCTGTGTACTCTTTGGTTaGTGGTTTGGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: PIQLEPWVPRCVLFG*WFGPWALGVCVSVW Trigger: CCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCATGGCTCCAGCTGGATAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | ATCCAGCTGGAGCCATGGGTCCCCCGCTGTGTACTCTTTGGTTGGTaGTTTGGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGGTTG | + |
|
Preference number: 1 (lower is better) Translates to: IQLEPWVPRCVLFGW*FGPWALGVCVSVWL Trigger: CAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCATGGCTCCAGCTGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | GCTGGAGCCATGGGTCCCCCGCTGTGTACTCTTTGGTTGGTGGTTTaGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGGTTGATATT | + |
|
Preference number: 1 (lower is better) Translates to: AGAMGPPLCTLWLVV*SLGPWGVCVCLVDI Trigger: AATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCATGGCTCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | GTTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATaGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCTTTGTCCCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: VWCLQMGWIPRWGSL*MAFPSVCALLFVPA Trigger: TGCAGGGACAAAGAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | CCATGGGTCCCCCGCTGTGTACTCTTTGGTTGGTGGTTTGGTCCCTaGGCCCTTGGGGTGTGTGTGTCTGTTTGGTTGATATTGTTGTTC | + |
|
Preference number: 1 (lower is better) Translates to: PWVPRCVLFGWWFGP*ALGVCVSVWLILLF Trigger: GAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | GGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATaGCCTTTCCTTCAGTCTGTGCTCTGCTCTTTGTCCCTGCAATTA | + |
|
Preference number: 1 (lower is better) Translates to: GVCRWDGSLGGAVYG*PFLQSVLCSLSLQL Trigger: TAATTGCAGGGACAAAGAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | AATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATGGATCCCTAGGTaGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: NSVWVWCLQMGWIPR*GSLWMAFPSVCALL Trigger: GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGACACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | CTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATaGATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: LCISNSVWVWCLQMG*IPRWGSLWMAFPSV Trigger: GACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 90 bp | GGTGGTTTGGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGGTTaGTATTGTTGTTCTTATTATTGGGTTGCAAACCCCTTCAGTTCC | + |
|
Preference number: 1 (lower is better) Translates to: GGLVPGPLGCVCLFG*YCCSYYWVANPFSS Trigger: GGAACTGAAGGGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | CCCCCGCTGTGTACTCTTTGGTTGGTGGTTTGGTCCCTGGGCCCTTaGGGTGTGTGTGTCTGTTTGGTTGATATTGTTGTTCTTATTATT | + |
|
Preference number: 1 (lower is better) Translates to: PPLCTLWLVVWSLGP*GVCVCLVDIVVLII Trigger: AATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 90 bp | AAATGTACCACATTTTCTGTATCCATTCCTCTGTTGATGGACATCTaGGTTGTAATGAACATAGTGGAGCATGTGTCCTTGTTATATGTT | + |
|
Preference number: 1 (lower is better) Translates to: KCTTFSVSIPLLMDI*VVMNIVEHVSLLYV Trigger: AACATATAACAAGGACACATGCTCCACTATGTTCATTACAACCCAGATGTCCATCAACAGAGGAATGGATACAGAAAATGTGGTACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 90 bp | GCCAATAAAGAAGACAGAAAAGTTCTGAGTGACTTATCTCTTTTATaGCACGCCTCAAGTAAATTGAGTATTGCAATTAGGCTCACTGTT | + |
|
Preference number: 1 (lower is better) Translates to: ANKEDRKVLSDLSLL*HASSKLSIAIRLTV Trigger: AACAGTGAGCCTAATTGCAATACTCAATTTACTTGAGGCGTGTCATAAAAGAGATAAGTCACTCAGAACTTTTCTGTCTTCTTTATTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGCTTCAGTCTGTGCTCTaGTCTTTGTCCCTGCAATTA | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLLQSVL*SLSLQL Trigger: TAATTGCAGGGACAAAGAGCAGAGCACAGACTGAAG...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGAAGACACTCAGCCCCTaGCCAATAAAGAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLKTLSP*PIKKTE Trigger: TTCTGTCTTCTTTATTGGCCAGGGGCTGAGTGTCTT...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGAGTCTCATTCCCTGGTaGGTTGAGTCTATTGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLSLIPW*VESIDS Trigger: TGAATCAATAGACTCAACTCACCAGGGAATGAGACT...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGCTCCTTTCAAATTCCTaGTCCTCTGTAATTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLLLSNS*SSVILP Trigger: AGGGAGAATTACAGAGGATCAGGAATTTGAAAGGAG...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCAGTCTCATTCCCTGGTaGGTTGAGTCTATTGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: IPRWGSLWMAFPSVCALLSLIPW*VESIDS Trigger: TGAATCAATAGACTCAACTCACCAGGGAATGAGACT...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGATGCATTTTCTTTTGTaGCTGGGTTACCTCAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLMHFLL*LGYLNQ Trigger: CTGATTGAGGTAACCCAGTCACAAAAGAAAATGCAT...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTCTTGACACTTTGGTGTaGTCTTCCTTCTTCTTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPLDTLV*SSFFLD Trigger: ATCCAAGAAGAAGGAAGACCACACCAAAGTGTCAAG...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCTTTTATGTGGGTAGGTaGCCTCATCTCTCAACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: IPRWGSLWMAFPSVCALLFYVGR*PHLSTK Trigger: TTTGGTTGAGAGATGAGGCCACCTACCCACATAAAA...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 90 bp | TTGGATAATTCAGCTAATGTCCTCCCTATTAGGTCTGGGAACCTCTaGGGTCCCTGGCATCTAGGACTTTTTAGTGGCTACCCCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LDNSANVLPIRSGNL*GPWHLGLFSGYPQF Trigger: GAACTGGGGGTAGCCACTAAAAAGTCCTAGATGCCAGGGACCCAAGAGGTTCCCAGACCTAATAGGGAGGACATTAGCTGAATTATCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGGACTTATCTCTTTTATaGCACGCCTCAAGTAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLDLSLL*HASSKL Trigger: CAATTTACTTGAGGCGTGTCATAAAAGAGATAAGTC...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCATGCATTTTCTTTTGTaGCTGGGTTACCTCAATCAG | + |
|
Preference number: 2 (lower is better) Translates to: IPRWGSLWMAFPSVCALLMHFLL*LGYLNQ Trigger: CTGATTGAGGTAACCCAGTCACAAAAGAAAATGCAT...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGTTCTTATTATTGGGTTaGAAACCCCTTCAGTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: QIRQFSATYPAGAMGPPLFLLLG*KPLQFL Trigger: AAGGAACTGAAGGGGTTTGCAACCCAATAATAAGAA...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTCTGTTGATGGACATCTaGGTTGTAATGAACATAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPLLMDI*VVMNIV Trigger: CACTATGTTCATTACAACCCAGATGTCCATCAACAG...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 90 bp | TGGTGGTTTGGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGGTaGATATTGTTGTTCTTATTATTGGGTTGCAAACCCCTTCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: WWFGPWALGVCVSVW*ILLFLLLGCKPLQF Trigger: GAACTGAAGGGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 90 bp | TGGTTGGTGGTTTGGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTaGGTTGATATTGTTGTTCTTATTATTGGGTTGCAAACCCCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: WLVVWSLGPWGVCVC*VDIVVLIIGLQTPS Trigger: TGAAGGGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTTCATCTACTTGCCTTTaGATGCCTTTGAATTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPSSTCL*MPLNFM Trigger: CATGAAATTCAAAGGCATTCAAAGGCAAGTAGATGA...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTCTATCTCCCATTTGTTaGATAATTCAGCTAATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPLSPIC*IIQLMS Trigger: GGACATTAGCTGAATTATCCAACAAATGGGAGATAG...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATAGGTGGGGCAGTCTATaGATGGCCTTTCCTTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDRWGSL*MAFPSV Trigger: GACTGAAGGAAAGGCCATCCATAGACTGCCCCACCT...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCAGTGAGTATATACCATaGATTTTCTTTTGTGACTGG | + |
|
Preference number: 2 (lower is better) Translates to: IPRWGSLWMAFPSVCALLSEYIP*IFFCDW Trigger: CCAGTCACAAAAGAAAATGCATGGTATATACTCACT...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATCTTTCCTTCAGTCTGTaGTCTGCTCTTTGTCCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDLSFSL*SALCPC Trigger: GCAGGGACAAAGAGCAGAGCACAGACTGAAGGAAAG...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 90 bp | GGTGTGTGTGTCTGTTTGGTTGATATTGTTGTTCTTATTATTGGGTaGCAAACCCCTTCAGTTCCTTTAGGCCTTGCCCTAACTTCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GVCVCLVDIVVLIIG*QTPSVPLGLALTSP Trigger: TGGAGAAGTTAGGGCAAGGCCTAAAGGAACTGAAGGGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATCTCCTTTCAAATTCCTaGTCCTCTGTAATTCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDLLSNS*SSVILP Trigger: AGGGAGAATTACAGAGGATCAGGAATTTGAAAGGAG...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR GCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATTCTGCTCTTTGTCCCTaGAATTACTCCTTTGATAGG | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDSALCP*NYSFDR Trigger: CCTATCAAAGGAGTAATTGCAGGGACAAAGAGCAGA...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATTTTTATGTGGGTAGGTaGCCTCATCTCTCAACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDFYVGR*PHLSTK Trigger: TTTGGTTGAGAGATGAGGCCACCTACCCACATAAAA...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 90 bp | GTCTATTCACTGGATATGATCTCTACAGGTTCTATCTCCCATTTGTaGGATAATTCAGCTAATGTCCTCCCTATTAGGTCTGGGAACCTC | + |
|
Preference number: 2 (lower is better) Translates to: VYSLDMISTGSISHL*DNSANVLPIRSGNL Trigger: GAGGTTCCCAGACCTAATAGGGAGGACATTAGCTGAATTATCCAACAAATGGGAGATAGAACCTGTAGAGATCATATCCAGTGAATAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 90 bp | CATGTCTATTCACTGGATATGATCTCTACAGGTTCTATCTCCCATTaGTTGGATAATTCAGCTAATGTCCTCCCTATTAGGTCTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HVYSLDMISTGSISH*LDNSANVLPIRSGN Trigger: GTTCCCAGACCTAATAGGGAGGACATTAGCTGAATTATCCAACAAATGGGAGATAGAACCTGTAGAGATCATATCCAGTGAATAGACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR TCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATGACTTATCTCTTTTATaGCACGCCTCAAGTAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDDLSLL*HASSKL Trigger: CAATTTACTTGAGGCGTGTCATAAAAGAGATAAGTC...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATCTATCTCCCATTTGTTaGATAATTCAGCTAATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: KHFFASAIVSGFGVCRWDLSPIC*IIQLMS Trigger: GGACATTAGCTGAATTATCCAACAAATGGGAGATAG...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATTGATTCATTTTGTTAAGACACTCAGCCCCTaGCCAATAAAGAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: RGLQVSFPGELSLLIHFVKTLSP*PIKKTE Trigger: TTCTGTCTTCTTTATTGGCCAGGGGCTGAGTGTCTT...AACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATTGATTCATTTTGTTCATGGTAGGGATGTGTaGTTGAACAAAGACACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: RGLQVSFPGELSLLIHFVHGRDV*LNKDTQ Trigger: CTGAGTGTCTTTGTTCAACCACACATCCCTACCATG...AACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | CTGGAGCCATGGGTCCCCCGCTGTGTACTCTTTGGTTaGTGGTTTGGTCCCTGGGCCCTTGGGGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LEPWVPRCVLFG*WFGPWALGVCV Trigger: CACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCATGGCTCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | ATGGGTCCCCCGCTGTGTACTCTTTGGTTGGTGGTTTaGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: MGPPLCTLWLVV*SLGPWGVCVCL Trigger: CAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | CCCCGCTGTGTACTCTTTGGTTGGTGGTTTGGTCCCTaGGCCCTTGGGGTGTGTGTGTCTGTTTGGTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: PRCVLFGWWFGP*ALGVCVSVWLI Trigger: TATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGACATCGACATCAGTATaGGTCAGGCTCTGGCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: QIRQFSATYPAGAMGPPLTSTSV*VRLWHS Trigger: GCTATGCCAGAGCCTGACCAATACTGATGTCGATGT...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | CTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATaGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LQMGWIPRWGSL*MAFPSVCALLF Trigger: AAAGAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | TGGGTTTGGTGTCTGCAGATGGGATGGATCCCTAGGTaGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WVWCLQMGWIPR*GSLWMAFPSVC Trigger: ACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | GCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATaGGATGGATCCCTAGGTGGGGCAGTCTATGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: ASAIVSGFGVCR*DGSLGGAVYGW Trigger: CCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | AGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATaGATCCCTAGGTGGGGCAGTCTATGGATGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SNSVWVWCLQMG*IPRWGSLWMAF Trigger: AAAGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGACACTATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTTCTGTGCTCTGCTCTTaGTCCCTGCAATTACTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPSVLCS*SLQLLL Trigger: AAGGAGTAATTGCAGGGACAAAGAGCAGAGCACAGA...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGCACGCCTCAAGTAAATaGAGTATTGCAATTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QIRQFSATYPAGAMGPPLHASSK*SIAIRL Trigger: GAGCCTAATTGCAATACTCAATTTACTTGAGGCGTG...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | TTACCAGATAAGGCAATTCTCTGCTACCTATCCAGCTaGAGCCATGGGTCCCCCGCTGTGTACTCTTTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPDKAILCYLSS*SHGSPAVYSLV Trigger: AACCAAAGAGTACACAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTCACGCCTCAAGTAAATaGAGTATTGCAATTAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPHASSK*SIAIRL Trigger: GAGCCTAATTGCAATACTCAATTTACTTGAGGCGTG...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCTGGTCTTCCTTCTTCTaGGATTTCATAAGGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IPRWGSLWMAFPSVCALLWSSFF*DFIRSV Trigger: CACAGACCTTATGAAATCCAAGAAGAAGGAAGACCA...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR GCA 72 bp | GTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTaGTCTGCTCTTTGTCCCTGCAATTACTCCTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VGQSMDGLSFSL*SALCPCNYSFD Trigger: ATCAAAGGAGTAATTGCAGGGACAAAGAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR GCA 72 bp | TTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTaGAGATGGGATGGATCCCTAGGTGGGGCAGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: FFASAIVSGFGV*RWDGSLGGAVY Trigger: ATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 72 bp | GTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGGTTaGTATTGTTGTTCTTATTATTGGGTTGCAAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: VPGPLGCVCLFG*YCCSYYWVANP Trigger: GGGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | TGTACTCTTTGGTTGGTGGTTTGGTCCCTGGGCCCTTaGGGTGTGTGTGTCTGTTTGGTTGATATTGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: CTLWLVVWSLGP*GVCVCLVDIVV Trigger: AACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCTCAAGTTTCATCTACTaGCCTTTGAATGCCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: IPRWGSLWMAFPSVCALLSSFIY*PLNAFE Trigger: TTCAAAGGCATTCAAAGGCAAGTAGATGAAACTTGA...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTTCTATCTCCCATTTGTaGGATAATTCAGCTAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPSISHL*DNSANV Trigger: GACATTAGCTGAATTATCCAACAAATGGGAGATAGA...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 72 bp | CCCTTCCCCACTACTACACACCTCCTTTCAAATTCCTaGTCCTCTGTAATTCTCCCTCATCTCCTCCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PFPTTTHLLSNS*SSVILPHLLLN Trigger: ATTCAGGAGGAGATGAGGGAGAATTACAGAGGATCAGGAATTTGAAAGGAGGTGTGTAGTAGTGGGGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATAGTAGAACTGTAGCCTaGACACTTTGGTGTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KHFFASAIVSGFGVCRWDSRTVA*TLWCGL Trigger: AAGACCACACCAAAGTGTCAAGGCTACAGTTCTACT...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CCA 72 bp | ACATTTTCTGTATCCATTCCTCTGTTGATGGACATCTaGGTTGTAATGAACATAGTGGAGCATGTGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TFSVSIPLLMDI*VVMNIVEHVSL Trigger: CAAGGACACATGCTCCACTATGTTCATTACAACCCAGATGTCCATCAACAGAGGAATGGATACAGAAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATTCAAGTTTCATCTACTaGCCTTTGAATGCCTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KHFFASAIVSGFGVCRWDSSFIY*PLNAFE Trigger: TTCAAAGGCATTCAAAGGCAAGTAGATGAAACTTGA...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 72 bp | TTCCTGACAGAGAGGTTTACAAGTCTCATTCCCTGGTaGGTTGAGTCTATTGATTCATTTTGTTTTTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FLTERFTSLIPW*VESIDSFCFCP Trigger: GGGACAAAAACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCTCTGTCAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 72 bp | GTGACTTATCTCTTTTATGACACGCCTCAAGTAAATTaGGTATTGCAATTAGGCTCACTGTTTAAATGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VTYLFYDTPQVN*VLQLGSLFKCL Trigger: GAGACATTTAAACAGTGAGCCTAATTGCAATACTCAATTTACTTGAGGCGTGTCATAAAAGAGATAAGTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR TCA 72 bp | GAAGACAGAAAAGTTCTGAGTGACTTATCTCTTTTATaGCACGCCTCAAGTAAATTGAGTATTGCAATTAGG | + |
|
Preference number: 3 (lower is better) Translates to: EDRKVLSDLSLL*HASSKLSIAIR Trigger: CCTAATTGCAATACTCAATTTACTTGAGGCGTGTCATAAAAGAGATAAGTCACTCAGAACTTTTCTGTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | TCCAGCTGGAGCCATGGGTCCCCCGCTGTGTACTCTTaGGTTGGTGGTTTGGTCCCTGGGCCCTTGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWSHGSPAVYS*VGGLVPGPLGC Trigger: ACACCCCAAGGGCCCAGGGACCAAACCACCAACCAAAGAGTACACAGCGGGGGACCCATGGCTCCAGCTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCACCAAAGAAAACAGCTaGGCCAAGCTGGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IPRWGSLWMAFPSVCALLTKENS*AKLDAT Trigger: TGTGGCATCCAGCTTGGCTCAGCTGTTTTCTTTGGT...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTACCAAAGAAAACAGCTaGGCCAAGCTGGATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPTKENS*AKLDAT Trigger: TGTGGCATCCAGCTTGGCTCAGCTGTTTTCTTTGGT...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR GCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCCTGAGCCAAGCTGGATaGCACACCCAATGTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: IPRWGSLWMAFPSVCALLLSQAG*HTQCRI Trigger: TATCCTACATTGGGTGTGGCATCCAGCTTGGCTCAG...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGAGATGGCTATGTCAATaGAAGCCAAGTGACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QIRQFSATYPAGAMGPPLRWLCQ*KPSDSE Trigger: TTCTGAGTCACTTGGCTTCCATTGACATAGCCATCT...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | CAGATAAGGCAATTCTCTGCTACCTATCCAGCTGGAGCCATGGGTCCCCCGCTGGACCCTACAAGCAATTaGATACACACTTGTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QIRQFSATYPAGAMGPPLDPTSN*IHTCLD Trigger: GTCCAAACAAGTGTGTATCCAATTGCTTGTAGGGTC...CAGCGGGGGACCCATGGCTCCAGCTGGATAGGTAGCAGAGAATTGCCTTATCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR GCA 90 bp | TTTGGTGTCTGCAGATGGGATGGATCCCTAGGTGGGGCAGTCTATGGATGGCCTCAGTGGATTGCAGATTaGCACAAAACGATCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FGVCRWDGSLGGAVYGWPQWIAD*HKTIIS Trigger: GCTTATGATCGTTTTGTGGCAATCTGCAATCCACTG...AGGCCATCCATAGACTGCCCCACCTAGGGATCCATCCCATCTGCAGACACCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCAGATGGCTATGTCAATaGAAGCCAAGTGACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPRWGSLWMAFPSVCALLRWLCQ*KPSDSE Trigger: TTCTGAGTCACTTGGCTTCCATTGACATAGCCATCT...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCGACCCTACAAGCAATTaGATACACACTTGTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPRWGSLWMAFPSVCALLDPTSN*IHTCLD Trigger: GTCCAAACAAGTGTGTATCCAATTGCTTGTAGGGTC...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | TCAGCTAATGTCCTCCCTATTAGGTCTGGGAACCTCTaGGGTCCCTGGCATCTAGGACTTTTTAGTGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SANVLPIRSGNL*GPWHLGLFSGY Trigger: GTAGCCACTAAAAAGTCCTAGATGCCAGGGACCCAAGAGGTTCCCAGACCTAATAGGGAGGACATTAGCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | GGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTTGGTaGATATTGTTGTTCTTATTATTGGGTTGCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GPWALGVCVSVW*ILLFLLLGCKP Trigger: GGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR TCA 90 bp | ATCCCTAGGTGGGGCAGTCTATGGATGGCCTTTCCTTCAGTCTGTGCTCTGCTCAGTGCCAGTAGAAAATaGATCAAGAATTATGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPRWGSLWMAFPSVCALLSASRK*IKNYED Trigger: GTCCTCATAATTCTTGATTCATTTTCTACTGGCACT...GAGCAGAGCACAGACTGAAGGAAAGGCCATCCATAGACTGCCCCACCTAGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | TGTAGCCTTGACACTTTGGTGTGGTCTTCCTTCTTCTaGGATTTCATAAGGTCTGTGAGTTGTGGCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSLDTLVWSSFF*DFIRSVSCGLS Trigger: GCTCAAGCCACAACTCACAGACCTTATGAAATCCAAGAAGAAGGAAGACCACACCAAAGTGTCAAGGCTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | GTTTGGTCCCTGGGCCCTTGGGGTGTGTGTGTCTGTTaGGTTGATATTGTTGTTCTTATTATTGGGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VWSLGPWGVCVC*VDIVVLIIGLQ Trigger: TTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGCCCAGGGACCAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | GCCCTTGGGGTGTGTGTGTCTGTTTGGTTGATATTGTaGTTCTTATTATTGGGTTGCAAACCCCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGVCVSVWLIL*FLLLGCKPLQF Trigger: GAACTGAAGGGGTTTGCAACCCAATAATAAGAACAACAATATCAACCAAACAGACACACACACCCCAAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR TCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATCAACCATATTTGGTGTaGCAGAAGAAGAGATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KHFFASAIVSGFGVCRWDQPYLV*QKKRWL Trigger: TAGCCATCTCTTCTTCTGTCACACCAAATATGGTTG...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR GCA 90 bp | ATTCATTTTGTTTTTGTCCCTCATGGTAGGGATGTGTGGTTGAACAAAGACACTCTGAGCCAAGCTGGATaGCACACCCAATGTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFVPHGRDVWLNKDTLSQAG*HTQCRI Trigger: TATCCTACATTGGGTGTGGCATCCAGCTTGGCTCAG...AGTGTCTTTGTTCAACCACACATCCCTACCATGAGGGACAAAAACAAAATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR GCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATCAGTGGATTGCAGATTaGCACAAAACGATCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHFFASAIVSGFGVCRWDQWIAD*HKTIIS Trigger: GCTTATGATCGTTTTGTGGCAATCTGCAATCCACTG...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATTGATTCATTTTGTTCTGAGCCAAGCTGGATaGCACACCCAATGTAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: RGLQVSFPGELSLLIHFVLSQAG*HTQCRI Trigger: TATCCTACATTGGGTGTGGCATCCAGCTTGGCTCAG...AACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATGTTGACAACCATATTTaGTGTGACAGAAGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHFFASAIVSGFGVCRWDVDNHI*CDRRRD Trigger: ATCTCTTCTTCTGTCACACCAAATATGGTTGTCAAC...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR TCA 90 bp | ATTCATTTTGTTTTTGTCCCTCATGGTAGGGATGTGTGGTTGAACAAAGACACTCAACCATATTTGGTGTaGCAGAAGAAGAGATGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFVPHGRDVWLNKDTQPYLV*QKKRWL Trigger: TAGCCATCTCTTCTTCTGTCACACCAAATATGGTTG...AGTGTCTTTGTTCAACCACACATCCCTACCATGAGGGACAAAAACAAAATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAATGTCTCTTTCATTCCCAAGAGAACCATGATAGTTACCAGGATCTTGCCAGATGGCTATGTCAATaGAAGCCAAGTGACTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKCLFHSQENHDSYQDLARWLCQ*KPSDSE Trigger: TTCTGAGTCACTTGGCTTCCATTGACATAGCCATCT...GGCAAGATCCTGGTAACTATCATGGTTCTCTTGGGAATGAAAGAGACATTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATTTTGTTTTTGTCCCTCATGGTAGGGATGTGTGGTTGAACAAAGACACTGACCCTACAAGCAATTaGATACACACTTGTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IHFVFVPHGRDVWLNKDTDPTSN*IHTCLD Trigger: GTCCAAACAAGTGTGTATCCAATTGCTTGTAGGGTC...AGTGTCTTTGTTCAACCACACATCCCTACCATGAGGGACAAAAACAAAATGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | GGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATaGATTCATTTTGTTTTTGTCCCTCATGGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLQVSFPGELSL*IHFVFVPHGRD Trigger: ATCCCTACCATGAGGGACAAAAACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | CTGGATATGATCTCTACAGGTTCTATCTCCCATTTGTaGGATAATTCAGCTAATGTCCTCCCTATTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDMISTGSISHL*DNSANVLPIRS Trigger: AGACCTAATAGGGAGGACATTAGCTGAATTATCCAACAAATGGGAGATAGAACCTGTAGAGATCATATCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | TCACTGGATATGATCTCTACAGGTTCTATCTCCCATTaGTTGGATAATTCAGCTAATGTCCTCCCTATTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLDMISTGSISH*LDNSANVLPIR Trigger: CCTAATAGGGAGGACATTAGCTGAATTATCCAACAAATGGGAGATAGAACCTGTAGAGATCATATCCAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | TGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTaGATGGACATCTGGGTTGTAATGAACATAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CKCTTFSVSIPL*MDIWVVMNIVE Trigger: CTCCACTATGTTCATTACAACCCAGATGTCCATCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| 3UTR CAA 72 bp | ATTATTTTCTTCTCTGTTCTGAGTAGAACTGTAGCCTaGACACTTTGGTGTGGTCTTCCTTCTTCTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: IIFFSVLSRTVA*TLWCGLPSSWI Trigger: AATCCAAGAAGAAGGAAGACCACACCAAAGTGTCAAGGCTACAGTTCTACTCAGAACAGAGAAGAAAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATTGATTCATTTTGTTGTTGACAACCATATTTaGTGTGACAGAAGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGLQVSFPGELSLLIHFVVDNHI*CDRRRD Trigger: ATCTCTTCTTCTGTCACACCAAATATGGTTGTCAAC...AACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS CCA 90 bp | GTAGGATATACTGCTCCTCTCCACCAGGAAGTTGACAACCATATTTaGTGTGACAGAAGAAGAGATGGCTATGTCAATGGAAGCCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGYTAPLHQEVDNHI*CDRRRDGYVNGSQV Trigger: CACTTGGCTTCCATTGACATAGCCATCTCTTCTTCTGTCACACCAAATATGGTTGTCAACTTCCTGGTGGAGAGGAGCAGTATATCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076289.2 ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CAA 90 bp | AAACACTTCTTTGCATCAGCAATAGTGTCTGGGTTTGGTGTCTGCAGATGGGATCTCTCCACCAGGAAGTaGACAACCATATTTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KHFFASAIVSGFGVCRWDLSTRK*TTIFGV Trigger: CACACCAAATATGGTTGTCAACTTCCTGGTGGAGAG...ATCCCATCTGCAGACACCAAACCCAGACACTATTGCTGATGCAAAGAAGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATTGATTCATTTTGTTCAGGTAGAGAAAGCCTaGTGTCGACCCTCAGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGLQVSFPGELSLLIHFVQVEKA*CRPSVE Trigger: TTCCACTGAGGGTCGACACAAGGCTTTCTCTACCTG...AACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CAA 90 bp | CAATTAGGCTCACTGTTTAAATGTCTCTTTCATTCCCAAGAGAACCATGATAGTCAGGTAGAGAAAGCCTaGTGTCGACCCTCAGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QLGSLFKCLFHSQENHDSQVEKA*CRPSVE Trigger: TTCCACTGAGGGTCGACACAAGGCTTTCTCTACCTG...ACTATCATGGTTCTCTTGGGAATGAAAGAGACATTTAAACAGTGAGCCTAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAATGTCTCTTTCATTCCCAAGAGAACCATGATAGTTACCAGGATCTTGCCCTCTCCACCAGGAAGTaGACAACCATATTTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FKCLFHSQENHDSYQDLALSTRK*TTIFGV Trigger: CACACCAAATATGGTTGTCAACTTCCTGGTGGAGAG...GGCAAGATCCTGGTAACTATCATGGTTCTCTTGGGAATGAAAGAGACATTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGTTTACAAGTCTCATTCCCTGGTGAGTTGAGTCTATTGATTCATTTTGTTCTCTCCACCAGGAAGTaGACAACCATATTTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLQVSFPGELSLLIHFVLSTRK*TTIFGV Trigger: CACACCAAATATGGTTGTCAACTTCCTGGTGGAGAG...AACAAAATGAATCAATAGACTCAACTCACCAGGGAATGAGACTTGTAAACCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213979.3 ENSMUST00000216331.2 ENSMUST00000217170.2 |
||