RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR51 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060918

Ensembl transcript IDs: ENSMUST00000076514.2, ENSMUST00000213415.2

Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTCCCAAGGAAAGCTTTGCCGTCCCTATTGAGCCTTACCTGCCTCTaGATGGAGTCCTCTACATGGCTGTCCCTGTGCCAACAAAACATG +
Preference number: 1 (lower is better)
Translates to: FPRKALPSLLSLTCL*MESSTWLSLCQQNM
Trigger: CATGTTTTGTTGGCACAGGGACAGCCATGTAGAGGACTCCATGCAGAGGCAGGTAAGGCTCAATAGGGACGGCAAAGCTTTCCTTGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CCA 90 bp CTGAAGAGGATTCTCTGTAAGTCCTCTGAAGTCCCCGGTTCACTGTaGGAGCCTTGCCTCAGATGGACCTTTCCTCAGAAAAATAATTTC +
Preference number: 1 (lower is better)
Translates to: LKRILCKSSEVPGSL*EPCLRWTFPQKNNF
Trigger: GAAATTATTTTTCTGAGGAAAGGTCCATCTGAGGCAAGGCTCCCACAGTGAACCGGGGACTTCAGAGGACTTACAGAGAATCCTCTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CCA 90 bp GATGATGAAGCAATGAAGAAAGGGCAGACATATGTAAAGGAGAGCTaGTATCAGGTGGAGTGTGCCCACTCTGATGGAGGACACCTACTA +
Preference number: 1 (lower is better)
Translates to: DDEAMKKGQTYVKES*YQVECAHSDGGHLL
Trigger: TAGTAGGTGTCCTCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATATGTCTGCCCTTTCTTCATTGCTTCATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CCA 90 bp CTGACTGTCCTTACCCTCCTCTTTAATTATTGTCATATTGTAGAGTaGGCCCATGAGTGTCACAGAAGACTTGTGGAGGTCAGGGGCCAT +
Preference number: 1 (lower is better)
Translates to: LTVLTLLFNYCHIVE*AHECHRRLVEVRGH
Trigger: ATGGCCCCTGACCTCCACAAGTCTTCTGTGACACTCATGGGCCCACTCTACAATATGACAATAATTAAAGAGGAGGGTAAGGACAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 90 bp GCTATAATTGTTAACCTTTGCACATGCTGGTCACTCACTCGCACTTaGATTCCCAAGGAAAGCTTTGCCGTCCCTATTGAGCCTTACCTG +
Preference number: 1 (lower is better)
Translates to: AIIVNLCTCWSLTRT*IPKESFAVPIEPYL
Trigger: CAGGTAAGGCTCAATAGGGACGGCAAAGCTTTCCTTGGGAATTCAAGTGCGAGTGAGTGACCAGCATGTGCAAAGGTTAACAATTATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CCA 90 bp AAGTCCTCTGAAGTCCCCGGTTCACTGTGGGAGCCTTGCCTCAGATaGACCTTTCCTCAGAAAAATAATTTCAAATATCTCCAAACTTCA +
Preference number: 1 (lower is better)
Translates to: KSSEVPGSLWEPCLR*TFPQKNNFKYLQTS
Trigger: TGAAGTTTGGAGATATTTGAAATTATTTTTCTGAGGAAAGGTCCATCTGAGGCAAGGCTCCCACAGTGAACCGGGGACTTCAGAGGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR TCA 90 bp CCATTGTGTGATCCAGGGATCCACCCAACTGGTCAGGTTATACAGCAAGCTATCCTTCCAGATGAGACTTaGAGGGACAGTGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: PLCDPGIHPTGQVIQQAILPDET*RDSADG
Trigger: GCCATCTGCACTGTCCCTTCAAGTCTCATCTGGAAG...GATAGCTTGCTGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CCA 90 bp ACAGTGCAGATGGCATCTGAGACACAGATGCTGTCTGAAGCTTCTACTGCCCATAGAGCTGGTATCAGGTaGAGTGTGCCCACTCTGATG +
Preference number: 2 (lower is better)
Translates to: TVQMASETQMLSEASTAHRAGIR*SVPTLM
Trigger: CATCAGAGTGGGCACACTCCACCTGATACCAGCTCT...ATGGGCAGTAGAAGCTTCAGACAGCATCTGTGTCTCAGATGCCATCTGCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CAA 90 bp CAGGAAGAGGCACCTGAACAGCAATGTACTGTGACCTGCCGCAGCTaGGATCCTGGAACCATGACACAGGATGATGAAGCAATGAAGAAA +
Preference number: 2 (lower is better)
Translates to: QEEAPEQQCTVTCRS*DPGTMTQDDEAMKK
Trigger: TTTCTTCATTGCTTCATCATCCTGTGTCATGGTTCCAGGATCCAAGCTGCGGCAGGTCACAGTACATTGCTGTTCAGGTGCCTCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR TCA 90 bp ACACAGGATGATGAAGCAATGAAGAAAGGGCAGACATATGTAAAGGAGAGCTGGAGTCACCAGGACAACTaGGGCCTCTCGGGACCTAAA +
Preference number: 2 (lower is better)
Translates to: TQDDEAMKKGQTYVKESWSHQDN*GLSGPK
Trigger: TTTAGGTCCCGAGAGGCCTCAGTTGTCCTGGTGACT...CCAGCTCTCCTTTACATATGTCTGCCCTTTCTTCATTGCTTCATCATCCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CCA 90 bp CCATTGTGTGATCCAGGGATCCACCCAACTGGTCAGGTTATACAGCAAGCTATCTATGTAAAGGAGAGCTaGTATCAGGTGGAGTGTGCC +
Preference number: 2 (lower is better)
Translates to: PLCDPGIHPTGQVIQQAIYVKES*YQVECA
Trigger: GGCACACTCCACCTGATACCAGCTCTCCTTTACATA...GATAGCTTGCTGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CCA 90 bp CAGACATATGTAAAGGAGAGCTGGTATCAGGTGGAGTGTGCCCACTCTGATGGAGAGCCTTGCCTCAGATaGACCTTTCCTCAGAAAAAT +
Preference number: 2 (lower is better)
Translates to: QTYVKESWYQVECAHSDGEPCLR*TFPQKN
Trigger: ATTTTTCTGAGGAAAGGTCCATCTGAGGCAAGGCTC...TCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATATGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR GCA 90 bp TGTCCATTGTGTGATCCAGGGATCCACCCAACTGGTCAGGTTATACAGCAAGCTACATGGCTGTCCCTGTaGCAACAAAACATGTTTACT +
Preference number: 2 (lower is better)
Translates to: CPLCDPGIHPTGQVIQQATWLSL*QQNMFT
Trigger: AGTAAACATGTTTTGTTGGCACAGGGACAGCCATGT...AGCTTGCTGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR GCA 90 bp TATGTAAAGGAGAGCTGGTATCAGGTGGAGTGTGCCCACTCTGATGGAGGACACGACGTAACAAATTGTTaGATTGGGGATAATAACTTC +
Preference number: 2 (lower is better)
Translates to: YVKESWYQVECAHSDGGHDVTNC*IGDNNF
Trigger: GAAGTTATTATCCCCAATGCAACAATTTGTTACGTC...GTGTCCTCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR GCA 90 bp TGTCCATTGTGTGATCCAGGGATCCACCCAACTGGTCAGGTTATACAGCAAGCTATAATTGTTAACCTTTaGACATGCTGGTCACTCACT +
Preference number: 2 (lower is better)
Translates to: CPLCDPGIHPTGQVIQQAIIVNL*TCWSLT
Trigger: AGTGAGTGACCAGCATGTGCAAAGGTTAACAATTAT...AGCTTGCTGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CAA 90 bp GGGACAGTGCAGATGGCATCTGAGACACAGATGCTGTCTGAAGCTTCTACTGCCGTGACCTGCCGCAGCTaGGATCCTGGAACCATGACA +
Preference number: 3 (lower is better)
Translates to: GTVQMASETQMLSEASTAVTCRS*DPGTMT
Trigger: TGTCATGGTTCCAGGATCCAAGCTGCGGCAGGTCAC...GGCAGTAGAAGCTTCAGACAGCATCTGTGTCTCAGATGCCATCTGCACTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 72 bp AAAGGAGAGCTGGTATCAGGTGGAGTGTGCCCACTCTaGTGGAGGACACCTACTACCGCCATACCCCAGAAC +
Preference number: 3 (lower is better)
Translates to: KGELVSGGVCPL*WRTPTTAIPQN
Trigger: GTTCTGGGGTATGGCGGTAGTAGGTGTCCTCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR GCA 72 bp CCAAGGAAAGCTTTGCCGTCCCTATTGAGCCTTACCTaGCTCTGCATGGAGTCCTCTACATGGCTGTCCCTG +
Preference number: 3 (lower is better)
Translates to: PRKALPSLLSLT*LCMESSTWLSL
Trigger: CAGGGACAGCCATGTAGAGGACTCCATGCAGAGGCAGGTAAGGCTCAATAGGGACGGCAAAGCTTTCCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR GCA 72 bp AAAGCTTTGCCGTCCCTATTGAGCCTTACCTGCCTCTaGATGGAGTCCTCTACATGGCTGTCCCTGTGCCAA +
Preference number: 3 (lower is better)
Translates to: KALPSLLSLTCL*MESSTWLSLCQ
Trigger: TTGGCACAGGGACAGCCATGTAGAGGACTCCATGCAGAGGCAGGTAAGGCTCAATAGGGACGGCAAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR GCA 72 bp CAGGAAGAGGCACCTGAACAGCAATGTACTGTGACCTaGCGCAGCTTGGATCCTGGAACCATGACACAGGAT +
Preference number: 3 (lower is better)
Translates to: QEEAPEQQCTVT*RSLDPGTMTQD
Trigger: ATCCTGTGTCATGGTTCCAGGATCCAAGCTGCGGCAGGTCACAGTACATTGCTGTTCAGGTGCCTCTTCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 72 bp GTGCACCTCGGCATTGAGAGACTCTCTGCTTCCAGATaGGACTTGAAGGGACAGTGCAGATGGCATCTGAGA +
Preference number: 3 (lower is better)
Translates to: VHLGIERLSASR*DLKGQCRWHLR
Trigger: TCTCAGATGCCATCTGCACTGTCCCTTCAAGTCTCATCTGGAAGCAGAGAGTCTCTCAATGCCGAGGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CAA 90 bp ACACAGGATGATGAAGCAATGAAGAAAGGGCAGACATATGTAAAGGAGAGCTGGGCTTTGCCGTCCCTATaGAGCCTTACCTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: TQDDEAMKKGQTYVKESWALPSL*SLTCLC
Trigger: GCAGAGGCAGGTAAGGCTCAATAGGGACGGCAAAGC...CCAGCTCTCCTTTACATATGTCTGCCCTTTCTTCATTGCTTCATCATCCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 72 bp CACTTGAATTCCCAAGGAAAGCTTTGCCGTCCCTATTaGGCCTTACCTGCCTCTGCATGGAGTCCTCTACAT +
Preference number: 3 (lower is better)
Translates to: HLNSQGKLCRPY*ALPASAWSPLH
Trigger: ATGTAGAGGACTCCATGCAGAGGCAGGTAAGGCTCAATAGGGACGGCAAAGCTTTCCTTGGGAATTCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 72 bp GTCACAGAAGACTTGTGGAGGTCAGGGGCCATCTTTTaGGCATCAGTTCTCTCTGTCCATTGTGTGATCCAG +
Preference number: 3 (lower is better)
Translates to: VTEDLWRSGAIF*ASVLSVHCVIQ
Trigger: CTGGATCACACAATGGACAGAGAGAACTGATGCTCAAAAGATGGCCCCTGACCTCCACAAGTCTTCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CCA 72 bp GCAATGAAGAAAGGGCAGACATATGTAAAGGAGAGCTaGTATCAGGTGGAGTGTGCCCACTCTGATGGAGGA +
Preference number: 3 (lower is better)
Translates to: AMKKGQTYVKES*YQVECAHSDGG
Trigger: TCCTCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATATGTCTGCCCTTTCTTCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CAA 90 bp ACACAGGATGATGAAGCAATGAAGAAAGGGCAGACATATGTAAAGGAGAGCTGGTTCACTGTGGGAGCCTaGCCTCAGATGGACCTTTCC +
Preference number: 3 (lower is better)
Translates to: TQDDEAMKKGQTYVKESWFTVGA*PQMDLS
Trigger: GGAAAGGTCCATCTGAGGCAAGGCTCCCACAGTGAA...CCAGCTCTCCTTTACATATGTCTGCCCTTTCTTCATTGCTTCATCATCCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 72 bp GTTAACCTTTGCACATGCTGGTCACTCACTCGCACTTaGATTCCCAAGGAAAGCTTTGCCGTCCCTATTGAG +
Preference number: 3 (lower is better)
Translates to: VNLCTCWSLTRT*IPKESFAVPIE
Trigger: CTCAATAGGGACGGCAAAGCTTTCCTTGGGAATTCAAGTGCGAGTGAGTGACCAGCATGTGCAAAGGTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR-3UTR CAA 90 bp TGTCCATTGTGTGATCCAGGGATCCACCCAACTGGTCAGGTTATACAGCAAGCTAGCCCCTTATTCCCCTaGTTACATATGTTCCTTTGT +
Preference number: 3 (lower is better)
Translates to: CPLCDPGIHPTGQVIQQASPLFP*LHMFLC
Trigger: ACAAAGGAACATATGTAACAAGGGGAATAAGGGGCT...AGCTTGCTGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR TCA 72 bp CCATCTTTTGAGCATCAGTTCTCTCTGTCCATTGTGTaGTCCAGGGATCCACCCAACTGGTCAGGTTATACA +
Preference number: 3 (lower is better)
Translates to: PSFEHQFSLSIV*SRDPPNWSGYT
Trigger: TGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGGACAGAGAGAACTGATGCTCAAAAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CCA 72 bp CTTACCCTCCTCTTTAATTATTGTCATATTGTAGAGTaGGCCCATGAGTGTCACAGAAGACTTGTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: LTLLFNYCHIVE*AHECHRRLVEV
Trigger: GACCTCCACAAGTCTTCTGTGACACTCATGGGCCCACTCTACAATATGACAATAATTAAAGAGGAGGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR TCA 90 bp TATGTAAAGGAGAGCTGGTATCAGGTGGAGTGTGCCCACTCTGATGGAGGACACAGAGGGAGACCACAGTaGGGTGAGACCCACACGTCG +
Preference number: 4 (lower is better)
Translates to: YVKESWYQVECAHSDGGHRGRPQ*GETHTS
Trigger: CGACGTGTGGGTCTCACCTCACTGTGGTCTCCCTCT...GTGTCCTCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR CCA 90 bp AGCCTTACCTGCCTCTGCATGGAGTCCTCTACATGGCTGTCCCTGTGCCAACAAGGGTCACAGAAGAAGTaGTGCACTGCATTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SLTCLCMESSTWLSLCQQGSQKK*CTALWE
Trigger: TTCCCACAATGCAGTGCACCACTTCTTCTGTGACCC...TTGTTGGCACAGGGACAGCCATGTAGAGGACTCCATGCAGAGGCAGGTAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CAA 72 bp GCACCTGAACAGCAATGTACTGTGACCTGCCGCAGCTaGGATCCTGGAACCATGACACAGGATGATGAAGCA +
Preference number: 4 (lower is better)
Translates to: APEQQCTVTCRS*DPGTMTQDDEA
Trigger: TGCTTCATCATCCTGTGTCATGGTTCCAGGATCCAAGCTGCGGCAGGTCACAGTACATTGCTGTTCAGGTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CAA 72 bp GCACTTGAATTCCCAAGGAAAGCTTTGCCGTCCCTATaGAGCCTTACCTGCCTCTGCATGGAGTCCTCTACA +
Preference number: 4 (lower is better)
Translates to: ALEFPRKALPSL*SLTCLCMESST
Trigger: TGTAGAGGACTCCATGCAGAGGCAGGTAAGGCTCAATAGGGACGGCAAAGCTTTCCTTGGGAATTCAAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
3UTR CAA 72 bp AGGGGCCATCTTTTGAGCATCAGTTCTCTCTGTCCATaGTGTGATCCAGGGATCCACCCAACTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: RGHLLSISSLCP*CDPGIHPTGQV
Trigger: AACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGGACAGAGAGAACTGATGCTCAAAAGATGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR CCA 90 bp TGTCCATTGTGTGATCCAGGGATCCACCCAACTGGTCAGGTTATACAGCAAGCTGGAGGACACAGAGTCTaGGTCTCATCATCATGGTGT +
Preference number: 4 (lower is better)
Translates to: CPLCDPGIHPTGQVIQQAGGHRV*VSSSWC
Trigger: ACACCATGATGATGAGACCCAGACTCTGTGTCCTCC...AGCTTGCTGTATAACCTGACCAGTTGGGTGGATCCCTGGATCACACAATGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR TCA 90 bp TATGTAAAGGAGAGCTGGTATCAGGTGGAGTGTGCCCACTCTGATGGAGGACACAACCTCTTCTTTCTCTaGCTGTCTAGTGAGTCCCAA +
Preference number: 4 (lower is better)
Translates to: YVKESWYQVECAHSDGGHNLFFL*LSSESQ
Trigger: TTGGGACTCACTAGACAGTCAGAGAAAGAAGAGGTT...GTGTCCTCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR TCA 90 bp ACAGTGCAGATGGCATCTGAGACACAGATGCTGTCTGAAGCTTCTACTGCCCATCACTGTGTATGTAGATaGAGGGTGCATATAGATGCC +
Preference number: 4 (lower is better)
Translates to: TVQMASETQMLSEASTAHHCVCR*RVHIDA
Trigger: GGCATCTATATGCACCCTTCATCTACATACACAGTG...ATGGGCAGTAGAAGCTTCAGACAGCATCTGTGTCTCAGATGCCATCTGCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR GCA 90 bp CAGACATATGTAAAGGAGAGCTGGTATCAGGTGGAGTGTGCCCACTCTGATGGACATATGATTCACCAATaGCTTGGGGACAATGACAGA +
Preference number: 4 (lower is better)
Translates to: QTYVKESWYQVECAHSDGHMIHQ*LGDNDR
Trigger: TCTGTCATTGTCCCCAAGGCATTGGTGAATCATATG...TCCATCAGAGTGGGCACACTCCACCTGATACCAGCTCTCCTTTACATATGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR GCA 90 bp ACACAGGATGATGAAGCAATGAAGAAAGGGCAGACATATGTAAAGGAGAGCTGGGTGGCCACTGTGTCCTaGACTGTGTATGTAGATGAA +
Preference number: 4 (lower is better)
Translates to: TQDDEAMKKGQTYVKESWVATVS*TVYVDE
Trigger: TTCATCTACATACACAGTGCAGGACACAGTGGCCAC...CCAGCTCTCCTTTACATATGTCTGCCCTTTCTTCATTGCTTCATCATCCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR CCA 90 bp GTGCCAACAAAACATGTTTACTCAGGGTTTCCTCTGATCCCTATAGCAATGAAGTGGTGCACTGCATTGTaGGAACAGAAGGTGAGTCGA +
Preference number: 4 (lower is better)
Translates to: VPTKHVYSGFPLIPIAMKWCTAL*EQKVSR
Trigger: TCGACTCACCTTCTGTTCCCACAATGCAGTGCACCA...CTTCATTGCTATAGGGATCAGAGGAAACCCTGAGTAAACATGTTTTGTTGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS-3UTR CCA 90 bp ATACATTGGTTTCTCTGTGAAGATGAACAGAGCATGATGTCTAGGAGTCCTCTCGCTTTCCTTATTCCATaGGCAGATTTTAACTTCAGA +
Preference number: 4 (lower is better)
Translates to: IHWFLCEDEQSMMSRSPLAFLIP*ADFNFR
Trigger: TCTGAAGTTAAAATCTGCCCATGGAATAAGGAAAGC...GAGAGGACTCCTAGACATCATGCTCTGTTCATCTTCACAGAGAAACCAATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS TCA 90 bp TGTGAAGATGACGGTGGCCACTGTGTCCTGCACTGTGTATGTAGATaGAGGGTGCATATAGATGCCCAGGATCGCCCCATAGAAGAGGGA +
Preference number: 5 (lower is better)
Translates to: CEDDGGHCVLHCVCR*RVHIDAQDRPIEEG
Trigger: TCCCTCTTCTATGGGGCGATCCTGGGCATCTATATGCACCCTTCATCTACATACACAGTGCAGGACACAGTGGCCACCGTCATCTTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS GCA 90 bp GAACAGAAGGTGAGTCGAACCATGAGGAGAGTATGCAAGAGAGCATaGAGGTTTGTGATGGCCCATGATATGGCCACCAGGAGGACACAG +
Preference number: 5 (lower is better)
Translates to: EQKVSRTMRRVCKRA*RFVMAHDMATRRTQ
Trigger: CTGTGTCCTCCTGGTGGCCATATCATGGGCCATCACAAACCTGCATGCTCTCTTGCATACTCTCCTCATGGTTCGACTCACCTTCTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS TCA 90 bp CATGAGGAGAGTATGCAAGAGAGCATGCAGGTTTGTGATGGCCCATaGTATGGCCACCAGGAGGACACAGAGTCTGGGTCTCATCATCAT +
Preference number: 5 (lower is better)
Translates to: HEESMQESMQVCDGP*YGHQEDTESGSHHH
Trigger: ATGATGATGAGACCCAGACTCTGTGTCCTCCTGGTGGCCATATCATGGGCCATCACAAACCTGCATGCTCTCTTGCATACTCTCCTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS-3UTR CAA 90 bp ACAGTGCAGATGGCATCTGAGACACAGATGCTGTCTGAAGCTTCTACTGCCCATAGGAAGCCATCCATATaGCTGAATGTGATGAAGAAA +
Preference number: 5 (lower is better)
Translates to: TVQMASETQMLSEASTAHRKPSI*LNVMKK
Trigger: TTTCTTCATCACATTCAGCAATATGGATGGCTTCCT...ATGGGCAGTAGAAGCTTCAGACAGCATCTGTGTCTCAGATGCCATCTGCACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213415.2
CDS CCA 90 bp AACCTTAGAGAAGATGTAGGCATAGGAAACAATAATGCATGTAAATaGAGTCATAAATACCAATCCACCAATGGTGAAGACCATCAGGTC +
Preference number: 5 (lower is better)
Translates to: NLREDVGIGNNNACK*SHKYQSTNGEDHQV
Trigger: GACCTGATGGTCTTCACCATTGGTGGATTGGTATTTATGACTCCATTTACATGCATTATTGTTTCCTATGCCTACATCTTCTCTAAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS TCA 72 bp GACGGTGGCCACTGTGTCCTGCACTGTGTATGTAGATaGAGGGTGCATATAGATGCCCAGGATCGCCCCATA +
Preference number: 6 (lower is better)
Translates to: DGGHCVLHCVCR*RVHIDAQDRPI
Trigger: TATGGGGCGATCCTGGGCATCTATATGCACCCTTCATCTACATACACAGTGCAGGACACAGTGGCCACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS TCA 72 bp AGTATGCAAGAGAGCATGCAGGTTTGTGATGGCCCATaGTATGGCCACCAGGAGGACACAGAGTCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: SMQESMQVCDGP*YGHQEDTESGS
Trigger: AGACCCAGACTCTGTGTCCTCCTGGTGGCCATATCATGGGCCATCACAAACCTGCATGCTCTCTTGCATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS GCA 72 bp TGGGAACAGAAGGTGAGTCGAACCATGAGGAGAGTATaGAAGAGAGCATGCAGGTTTGTGATGGCCCATGAT +
Preference number: 6 (lower is better)
Translates to: WEQKVSRTMRRV*KRACRFVMAHD
Trigger: ATCATGGGCCATCACAAACCTGCATGCTCTCTTGCATACTCTCCTCATGGTTCGACTCACCTTCTGTTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS GCA 72 bp AGATCTGGGTCATACACCCCGTGTAAGAGATGGACTTaGTTCCCAACATATGATTCACCAATGCCTTGGGGA +
Preference number: 6 (lower is better)
Translates to: RSGSYTPCKRWT*FPTYDSPMPWG
Trigger: TCCCCAAGGCATTGGTGAATCATATGTTGGGAAGCAAGTCCATCTCTTACACGGGGTGTATGACCCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2
CDS GCA 72 bp AGAGATGGACTTGCTTCCCAACATATGATTCACCAATaGCTTGGGGACAATGACAGATGGAGCACTAATGTC +
Preference number: 6 (lower is better)
Translates to: RDGLASQHMIHQ*LGDNDRWSTNV
Trigger: GACATTAGTGCTCCATCTGTCATTGTCCCCAAGGCATTGGTGAATCATATGTTGGGAAGCAAGTCCATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076514.2
ENSMUST00000213415.2