Pregenerated sensors for OLFR508 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063764Ensembl transcript IDs: ENSMUST00000072914.3
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAACCCAACTGGAATTGGCTGGATaGGGTATCAAAAGAAGAATC | + |
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Preference number: 2 (lower is better) Translates to: SKNSEPLRFYLHRNEITQLELAG*GIKRRI Trigger: GATTCTTCTTTTGATACCTCATCCAGCCAATTCCAG...TTGGGTTATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAACCCAAAGATTAGGGAGAATATaGGTGACTTCTGGAATTGGC | + |
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Preference number: 2 (lower is better) Translates to: SKNSEPLRFYLHRNEITQRLGRI*VTSGIG Trigger: GCCAATTCCAGAAGTCACTCATATTCTCCCTAATCT...TTGGGTTATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAACCCAAAGTGACTTCTGGAATTaGCTGGATGAGGTATCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SKNSEPLRFYLHRNEITQSDFWN*LDEVSK Trigger: TTTTGATACCTCATCCAGCCAATTCCAGAAGTCACT...TTGGGTTATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| 3UTR-3UTR CCA 90 bp | AAACAATCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAAATATGAGTGACTTCTaGAATTGGCTGGATGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: KQSKNSEPLRFYLHRNEINMSDF*NWLDEV Trigger: TACCTCATCCAGCCAATTCCAGAAGTCACTCATATT...TATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGATTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| 3UTR-3UTR CAA 90 bp | AAACAATCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAATACTGTCCAGTCATTaGGAAGTTCAGAGCTTATTA | + |
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Preference number: 3 (lower is better) Translates to: KQSKNSEPLRFYLHRNEIILSSH*EVQSLL Trigger: TAATAAGCTCTGAACTTCCAAATGACTGGACAGTAT...TATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGATTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| CDS-3UTR CCA 90 bp | AAACAATCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATATGGAGGACATCTGCGTaGCATAGAGCAGAGGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KQSKNSEPLRFYLHRNEIWRTSA*HRAEGS Trigger: GCTCCCCTCTGCTCTATGCCACGCAGATGTCCTCCA...TATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGATTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| CDS-3UTR TCA 90 bp | TCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAACCCAACAGGAAGCACTCAGTTaGCCCAAATGTCACTACAGA | + |
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Preference number: 4 (lower is better) Translates to: SKNSEPLRFYLHRNEITQQEALS*PKCHYR Trigger: TCTGTAGTGACATTTGGGTCAACTGAGTGCTTCCTG...TTGGGTTATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| CDS-3UTR TCA 90 bp | TCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAACCCAAAAGAGATTGCTGGAATaGCTTCAGAAGAAAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SKNSEPLRFYLHRNEITQKRLLE*LQKKSH Trigger: ATGACTTTTCTTCTGAAGTCATTCCAGCAATCTCTT...TTGGGTTATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| CDS-3UTR CAA 90 bp | TCCAAGAACTCTGAGCCCCTACGTTTTTATCTTCACAGGAATGAGATAACCCAAAGCGCATCTTCAAGATaGAGACAAGGATGTAAACAT | + |
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Preference number: 5 (lower is better) Translates to: SKNSEPLRFYLHRNEITQSASSR*RQGCKH Trigger: ATGTTTACATCCTTGTCTCAATCTTGAAGATGCGCT...TTGGGTTATCTCATTCCTGTGAAGATAAAAACGTAGGGGCTCAGAGTTCTTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| CDS TCA 90 bp | ATAAGACAGTGCAATAATAAACACAGTGACCACAATGATCGACCCTaGAGAGATTGCTGGAATGACTTCAGAAGAAAAGTCATGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: IRQCNNKHSDHNDRP*RDCWNDFRRKVMRT Trigger: TGTTCTCATGACTTTTCTTCTGAAGTCATTCCAGCAATCTCTTCAGGGTCGATCATTGTGGTCACTGTGTTTATTATTGCACTGTCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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| CDS CCA 72 bp | CTAGGTAGGAAGCTCCCACTAGGAGAATACAGACTGTaGAGGACATCTGCGTGGCATAGAGCAGAGGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LGRKLPLGEYRL*RTSAWHRAEGS Trigger: GCTCCCCTCTGCTCTATGCCACGCAGATGTCCTCCACAGTCTGTATTCTCCTAGTGGGAGCTTCCTACCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072914.3 |
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