Pregenerated sensors for OLFR504 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060105Ensembl transcript IDs: ENSMUST00000075595.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGATACCTAAGAAAAGGTACATGGGCTGCTTCAGGGATGGATCCTaGCAGATGATGATGAGAATGAGCACGTTTGTCCCTATTGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RIPKKRYMGCFRDGS*QMMMRMSTFVPIAE Trigger: CTCAGCAATAGGGACAAACGTGCTCATTCTCATCATCATCTGTCAGGATCCATCCCTGAAGCAGCCCATGTACCTTTTCTTAGGTATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS GCA 90 bp | CTAAGTGCATACACAATAGGGTTGAGTGAAGGAGGAGTGATATTGTaGATCACATTGAGCAAAACTGGGATCAAGGTGGCCTTGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LSAYTIGLSEGGVIL*ITLSKTGIKVALVS Trigger: AGAGACCAAGGCCACCTTGATCCCAGTTTTGCTCAATGTGATGCACAATATCACTCCTCCTTCACTCAACCCTATTGTGTATGCACTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS CAA 72 bp | GCTCCGACAAAGCACCTTTTGGAAGCCCTGCCTGAGTaGTCTGGTCCTAAGTGCATACACAATAGGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: APTKHLLEALPE*SGPKCIHNRVE Trigger: CTCAACCCTATTGTGTATGCACTTAGGACCAGACAACTCAGGCAGGGCTTCCAAAAGGTGCTTTGTCGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS GCA 72 bp | TCCCCATTCCAACCCATGCCAGGATTAACTGGAAAATaGTATTTGGTCTCCTGTCATCACATGCCAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SPFQPMPGLTGK*YLVSCHHMPGL Trigger: CAAGCCTGGCATGTGATGACAGGAGACCAAATAGCATTTTCCAGTTAATCCTGGCATGGGTTGGAATGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS CAA 72 bp | GGGTTGAGTGAAGGAGGAGTGATATTGTGCATCACATaGAGCAAAACTGGGATCAAGGTGGCCTTGGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GLSEGGVILCIT*SKTGIKVALVS Trigger: AGAGACCAAGGCCACCTTGATCCCAGTTTTGCTCAATGTGATGCACAATATCACTCCTCCTTCACTCAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS CAA 90 bp | GTCCTAAGTGCATACACAATAGGGTTGAGTGAAGGAGGAGTGATATaGTGCATCACATTGAGCAAAACTGGGATCAAGGTGGCCTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VLSAYTIGLSEGGVI*CITLSKTGIKVALV Trigger: GACCAAGGCCACCTTGATCCCAGTTTTGCTCAATGTGATGCACAATATCACTCCTCCTTCACTCAACCCTATTGTGTATGCACTTAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS TCA 72 bp | AAGAAAAGGTACATGGGCTGCTTCAGGGATGGATCCTaGCAGATGATGATGAGAATGAGCACGTTTGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: KKRYMGCFRDGS*QMMMRMSTFVP Trigger: AGGGACAAACGTGCTCATTCTCATCATCATCTGTCAGGATCCATCCCTGAAGCAGCCCATGTACCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS GCA 72 bp | TCTTGTAAGCTCCGACAAAGCACCTTTTGGAAGCCCTaGCTGAGTTGTCTGGTCCTAAGTGCATACACAATA | + |
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Preference number: 6 (lower is better) Translates to: SCKLRQSTFWKP*LSCLVLSAYTI Trigger: TATTGTGTATGCACTTAGGACCAGACAACTCAGGCAGGGCTTCCAAAAGGTGCTTTGTCGGAGCTTACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS CAA 90 bp | AAGCCCTGCCTGAGTTGTCTGGTCCTAAGTGCATACACAATAGGGTaGAGTGAAGGAGGAGTGATATTGTGCATCACATTGAGCAAAACT | + |
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Preference number: 6 (lower is better) Translates to: KPCLSCLVLSAYTIG*SEGGVILCITLSKT Trigger: AGTTTTGCTCAATGTGATGCACAATATCACTCCTCCTTCACTCAACCCTATTGTGTATGCACTTAGGACCAGACAACTCAGGCAGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS TCA 72 bp | GTACAGAGCGCAGAAGCAAAGTATATGACAATATTATaGGACCCAGTTCACTCCCCATTCCAACCCATGCCA | + |
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Preference number: 6 (lower is better) Translates to: VQSAEAKYMTIL*DPVHSPFQPMP Trigger: TGGCATGGGTTGGAATGGGGAGTGAACTGGGTCTCATAATATTGTCATATACTTTGCTTCTGCGCTCTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS GCA 72 bp | TACACAATAGGGTTGAGTGAAGGAGGAGTGATATTGTaGATCACATTGAGCAAAACTGGGATCAAGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: YTIGLSEGGVIL*ITLSKTGIKVA Trigger: GGCCACCTTGATCCCAGTTTTGCTCAATGTGATGCACAATATCACTCCTCCTTCACTCAACCCTATTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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| CDS CAA 72 bp | CAAGTGTTCAGAGCCTTAGAAACAGCTTCAGCTGAATaGAGTCTGAGTACAGAGCGCAGAAGCAAAGTATAT | + |
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Preference number: 6 (lower is better) Translates to: QVFRALETASAE*SLSTERRSKVY Trigger: ATATACTTTGCTTCTGCGCTCTGTACTCAGACTCAATTCAGCTGAAGCTGTTTCTAAGGCTCTGAACACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075595.3 |
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