Pregenerated sensors for OLFR502 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058014Ensembl transcript IDs: ENSMUST00000078933.5, ENSMUST00000216919.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGTGCCTGGTATAGAATGTCACAGACCATCCCAGGCCAGAGCTTaGCAGGAACATGCAGTCCATGAGTTCAGGTTGGCAGGAGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: FVPGIECHRPSQARA*QEHAVHEFRLAGVQ Trigger: TTGGACTCCTGCCAACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTCTGGCCTGGGATGGTCTGTGACATTCTATACCAGGCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CCA 90 bp | CTCAGCAACTCATTCTTTCCAGCACAAGATCCCACACTTTGTGCCTaGTATAGAATGTCACAGACCATCCCAGGCCAGAGCTTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LSNSFFPAQDPTLCA*YRMSQTIPGQSLAG Trigger: TCCTGCCAAGCTCTGGCCTGGGATGGTCTGTGACATTCTATACCAGGCACAAAGTGTGGGATCTTGTGCTGGAAAGAATGAGTTGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CCA 90 bp | CCCAGGCCAGAGCTTGGCAGGAACATGCAGTCCATGAGTTCAGGTTaGCAGGAGTCCAAAAACAAGGAAAGAAGTGTGTATTGTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: PRPELGRNMQSMSSG*QESKNKERSVYCSQ Trigger: TTGAGAACAATACACACTTCTTTCCTTGTTTTTGGACTCCTGCCAACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTCTGGCCTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CCA 90 bp | TTTGACTCTTCTGGGAAAGTATTTTCATTTGCTCGTCTTGGTTCTTaGAAACTCAGCAACTCATTCTTTCCAGCACAAGATCCCACACTT | + |
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Preference number: 1 (lower is better) Translates to: FDSSGKVFSFARLGS*KLSNSFFPAQDPTL Trigger: AAGTGTGGGATCTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATGAAAATACTTTCCCAGAAGAGTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 90 bp | TCCCAGGCCAGAGCTTGGCAGGAACATGCAGTCCATGAGTTCAGGTaGGCAGGAGTCCAAAAACAAGGAAAGAAGTGTGTATTGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SQARAWQEHAVHEFR*AGVQKQGKKCVLFS Trigger: TGAGAACAATACACACTTCTTTCCTTGTTTTTGGACTCCTGCCAACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTCTGGCCTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCACTTTTCTTCCCAGAAGACAGTGGTTAATGCAGAGGCCTATAGCTGCTCAGGAGCTACTGATGTGTaGTGGTTCTTGAGGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: KHFSSQKTVVNAEAYSCSGATDV*WFLRRD Trigger: GTCTCTCCTCAAGAACCATCACACATCAGTAGCTCC...TGAGCAGCTATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAGAAAAGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGACCATCCCAGGCCAGAGCTTGGCAGGAACATGCAGTCCATGAGTTCAGGTGTTGCACAATTAATATaGTTACCTGCACAAGATCAG | + |
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Preference number: 2 (lower is better) Translates to: TDHPRPELGRNMQSMSSGVAQLI*LPAQDQ Trigger: CTGATCTTGTGCAGGTAACCATATTAATTGTGCAAC...ACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTCTGGCCTGGGATGGTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAGCACAAGCCCACACTTTGTGCCTaGTATAGAATGTCACAGACC | + |
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Preference number: 2 (lower is better) Translates to: HLLVLVLGNSATHSFQHKPTLCA*YRMSQT Trigger: GGTCTGTGACATTCTATACCAGGCACAAAGTGTGGG...CTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 90 bp | AATCTAAGCCAGGTGGTAGTAGTGCTTGCCTTTAATCAAAGTACTTaGGAGGCAGAGAGAAACAGATCTGTTAGGTCAAGGTCAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: NLSQVVVVLAFNQST*EAERNRSVRSRSAC Trigger: ACAGGCTGACCTTGACCTAACAGATCTGTTTCTCTCTGCCTCCAAAGTACTTTGATTAAAGGCAAGCACTACTACCACCTGGCTTAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCACTTTTCTTCCCAGAAGACAGTGGTTAATGCAGAGGCCTATAGCTGCTCACACAGCCTGAAGGGTTaGAGTCTGTATTATTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: KHFSSQKTVVNAEAYSCSHSLKG*SLYYLG Trigger: ACCTAAATAATACAGACTTCAACCCTTCAGGCTGTG...TGAGCAGCTATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAGAAAAGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR TCA 90 bp | AACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAATGTGTGATGGTTCTTaGGGAGAGACACTCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: NHHHLKVAPTEGNHNFEEMCDGS*GETLIL Trigger: GAGAATGAGTGTCTCTCCTCAAGAACCATCACACAT...TTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTGTTGCACAATTAATATGGTTACCTGCACAAGATCAGGCCAATGCACAGTCCACAATAAGGCCATaGCCAGGGATAAAGACTACA | + |
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Preference number: 2 (lower is better) Translates to: MPVAQLIWLPAQDQANAQSTIRP*PGIKTT Trigger: TGTAGTCTTTATCCCTGGCCATGGCCTTATTGTGGA...CTGTGCATTGGCCTGATCTTGTGCAGGTAACCATATTAATTGTGCAACAGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | AACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAGCTGCTCAAAGCACATaGGTCATCTATACCATTCTC | + |
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Preference number: 2 (lower is better) Translates to: NHHHLKVAPTEGNHNFEEAAQST*VIYTIL Trigger: GAGAATGGTATAGATGACCCATGTGCTTTGAGCAGC...TTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | AACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAACTTCCCAGAAGACAGTaGTTAATGCAGAGGCCTATA | + |
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Preference number: 2 (lower is better) Translates to: NHHHLKVAPTEGNHNFEELPRRQ*LMQRPI Trigger: TATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAG...TTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGATAACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTTCCATGAGTTCAGGTTaGCAGGAGTCCAAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: CDNHHHLKVAPTEGNHNFSMSSG*QESKNK Trigger: CTTGTTTTTGGACTCCTGCCAACCTGAACTCATGGA...AAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTTATCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCACTTTTCTTCCCAGAAGACAGTGGTTAATGCAGAGGCCTATAGCTGCTCAGTAGACTTTTGCAAATaGCATGAGATTTGGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KHFSSQKTVVNAEAYSCSVDFCK*HEIWGK Trigger: TTTCCCCCAAATCTCATGTCATTTGCAAAAGTCTAC...TGAGCAGCTATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAGAAAAGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCACTTTTCTTCCCAGAAGACAGTGGTTAATGCAGAGGCCTATAGCTGCTCAATGCACAGTCCAGCATaGATAAAAGAAAACGAGACT | + |
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Preference number: 2 (lower is better) Translates to: KHFSSQKTVVNAEAYSCSMHSPA*IKENET Trigger: AGTCTCGTTTTCTTTTATTCATGCTGGACTGTGCAT...TGAGCAGCTATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAGAAAAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGAAACTCAGCAACTCATTCTTTCCAGCACAAGATCCCACACTTTGTGCCTATTAATATGGTTACCTaGACAAGATCAGGCCAATGC | + |
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Preference number: 2 (lower is better) Translates to: LGNSATHSFQHKIPHFVPINMVT*TRSGQC Trigger: GCATTGGCCTGATCTTGTGCAGGTAACCATATTAAT...AGGCACAAAGTGTGGGATCTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGGGAAAGTATTTTCATTTGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCATGGTAGGGATGTGTaGTTGAACAAAGCCACACAC | + |
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Preference number: 2 (lower is better) Translates to: LLGKYFHLLVLVLGNSATHGRDV*LNKATH Trigger: GTGTGTGGCTTTGTTCAACCACACATCCCTACCATG...AGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATGAAAATACTTTCCCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 90 bp | CTTACAAGTTTGACTCTTCTGGGAAAGTATTTTCATTTGCTCGTCTaGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAGCACAAGATC | + |
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Preference number: 2 (lower is better) Translates to: LTSLTLLGKYFHLLV*VLGNSATHSFQHKI Trigger: GATCTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATGAAAATACTTTCCCAGAAGAGTCAAACTTGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGACACTCATTCTCATTTTGGAATAAGGCTGCTGTTATGATACTGACCAAGCAGGAGAAGATAGAATaGGGACACTATGAAGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: ERHSFSFWNKAAVMILTKQEKIE*GHYEVR Trigger: TCTAACTTCATAGTGTCCCCATTCTATCTTCTCCTG...CTTGGTCAGTATCATAACAGCAGCCTTATTCCAAAATGAGAATGAGTGTCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 90 bp | GTGATCAAACTTACAAGTTTGACTCTTCTGGGAAAGTATTTTCATTaGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: VIKLTSLTLLGKYFH*LVLVLGNSATHSFQ Trigger: CTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATGAAAATACTTTCCCAGAAGAGTCAAACTTGTAAGTTTGATCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR TCA 72 bp | ATCCCAGGCCAGAGCTTGGCAGGAACATGCAGTCCATaGGTTCAGGTTGGCAGGAGTCCAAAAACAAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: IPGQSLAGTCSP*VQVGRSPKTRK Trigger: TTTCCTTGTTTTTGGACTCCTGCCAACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTCTGGCCTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CAA 90 bp | AACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAATCCCAGGCCAGAGCTaGGCAGGAACATGCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: NHHHLKVAPTEGNHNFEEIPGQS*AGTCSP Trigger: TGGACTGCATGTTCCTGCCAAGCTCTGGCCTGGGAT...TTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CCA 72 bp | TCATTCTTTCCAGCACAAGATCCCACACTTTGTGCCTaGTATAGAATGTCACAGACCATCCCAGGCCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: SFFPAQDPTLCA*YRMSQTIPGQS Trigger: GCTCTGGCCTGGGATGGTCTGTGACATTCTATACCAGGCACAAAGTGTGGGATCTTGTGCTGGAAAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR TCA 72 bp | GAGACTCTGTTCCCCCAAGTCAGTAAGAGGAGCTACTaGTGTGTGATGGTTCTTGAGGAGAGACACTCATTC | + |
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Preference number: 3 (lower is better) Translates to: ETLFPQVSKRSY*CVMVLEERHSF Trigger: GAATGAGTGTCTCTCCTCAAGAACCATCACACATCAGTAGCTCCTCTTACTGACTTGGGGGAACAGAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CCA 72 bp | GAGCTTGGCAGGAACATGCAGTCCATGAGTTCAGGTTaGCAGGAGTCCAAAAACAAGGAAAGAAGTGTGTAT | + |
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Preference number: 3 (lower is better) Translates to: ELGRNMQSMSSG*QESKNKERSVY Trigger: ATACACACTTCTTTCCTTGTTTTTGGACTCCTGCCAACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CAA 90 bp | TTAATATGGTTACCTGCACAAGATCAGGCCAATGCACAGTCCAGCATGAATAAAGGTAGGGATGTGTGGTaGAACAAAGCCACACACCTC | + |
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Preference number: 3 (lower is better) Translates to: LIWLPAQDQANAQSSMNKGRDVW*NKATHL Trigger: GAGGTGTGTGGCTTTGTTCAACCACACATCCCTACC...TTTATTCATGCTGGACTGTGCATTGGCCTGATCTTGTGCAGGTAACCATATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCACTTTTCTTCCCAGAAGACAGTGGTTAATGCAGAGGCCTATAGCTGCTCAGCACAGCCTGAAGGGTaGAAGTCTGTATTATTTAGG | + |
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Preference number: 3 (lower is better) Translates to: KHFSSQKTVVNAEAYSCSAQPEG*KSVLFR Trigger: CCTAAATAATACAGACTTCAACCCTTCAGGCTGTGC...TGAGCAGCTATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAGAAAAGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CAA 90 bp | CATTTGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAGCACAAGCAGAGAAATCATGAATaGATTCCCAACTCTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: HLLVLVLGNSATHSFQHKQRNHE*IPNSSL Trigger: CAGAGAAGAGTTGGGAATCAATTCATGATTTCTCTG...CTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CCA 72 bp | GTGATGGTTCTTGAGGAGAGACACTCATTCTCATTTTaGAATAAGGCTGCTGTTATGATACTGACCAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: VMVLEERHSFSF*NKAAVMILTKQ Trigger: TTGCTTGGTCAGTATCATAACAGCAGCCTTATTCCAAAATGAGAATGAGTGTCTCTCCTCAAGAACCATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR TCA 72 bp | CAATTCACAGTCACTGATAGGGTGAGTATATTGATATaGTCTATTTCTATACCTCATGGTAGGGATGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: QFTVTDRVSILI*SISIPHGRDVW Trigger: CCACACATCCCTACCATGAGGTATAGAAATAGATCATATCAATATACTCACCCTATCAGTGACTGTGAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR-3UTR CAA 90 bp | AATCAAGCACAGCCTGAAGGGTTGAAGTCTGTATTATTTAGGTTTCTCATACTAGATCACCAATATTTATaGAAGAGCTTGTCACATGCT | + |
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Preference number: 3 (lower is better) Translates to: NQAQPEGLKSVLFRFLILDHQYL*KSLSHA Trigger: AGCATGTGACAAGCTCTTCAATAAATATTGGTGATC...TAGTATGAGAAACCTAAATAATACAGACTTCAACCCTTCAGGCTGTGCTTGATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | CATGAGATTTGGGGGAAATTTAATATTCAATCTAAGCCAGGTGGTAGTAGTGCTGGAGCCAGCTGTGAATaGGGGAACAACTGCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: HEIWGKFNIQSKPGGSSAGASCE*GNNCRD Trigger: GTCCCTGCAGTTGTTCCCTCATTCACAGCTGGCTCC...AGCACTACTACCACCTGGCTTAGATTGAATATTAAATTTCCCCCAAATCTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR CCA 90 bp | AAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAAATACAGCCAAGGTACCTGTCACTGCAGTGTaGTTCCCATCCTCCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: KVAPTEGNHNFEENTAKVPVTAV*FPSSRK Trigger: TTTCCTGGAGGATGGGAACCACACTGCAGTGACAGG...TACCTTGGCTGTATTTTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR CCA 90 bp | AACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAGATCCTACAAGCAGCTaGACACAAACCTGTGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: NHHHLKVAPTEGNHNFEEDPTSS*TQTCVD Trigger: GTCCACACAGGTTTGTGTCCAGCTGCTTGTAGGATC...TTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 72 bp | AGAGCTTGGCAGGAACATGCAGTCCATGAGTTCAGGTaGGCAGGAGTCCAAAAACAAGGAAAGAAGTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: RAWQEHAVHEFR*AGVQKQGKKCV Trigger: TACACACTTCTTTCCTTGTTTTTGGACTCCTGCCAACCTGAACTCATGGACTGCATGTTCCTGCCAAGCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | CATTTGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAGCACAAGCAACTGCAGGGACACTaGCATCAGAACAAGATAGTT | + |
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Preference number: 4 (lower is better) Translates to: HLLVLVLGNSATHSFQHKQLQGH*HQNKIV Trigger: AACTATCTTGTTCTGATGTCAGTGTCCCTGCAGTTG...CTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR GCA 90 bp | AAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAAATACAGCCAAGGTACTGAACCAAGCTGGATaGCACATCCTAGATAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KVAPTEGNHNFEENTAKVLNQAG*HILDRR Trigger: TCTCCTATCTAGGATGTGGCATCCAGCTTGGTTCAG...TACCTTGGCTGTATTTTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | AAGCACTTTTCTTCCCAGAAGACAGTGGTTAATGCAGAGGCCTATAGCTGCTCATGTGGACATTTTGTTTaGATAAAGCAGTGGGCTACA | + |
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Preference number: 4 (lower is better) Translates to: KHFSSQKTVVNAEAYSCSCGHFV*IKQWAT Trigger: TGTAGCCCACTGCTTTATTCAAACAAAATGTCCACA...TGAGCAGCTATAGGCCTCTGCATTAACCACTGTCTTCTGGGAAGAAAAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | CATTTGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAGCACAAGAAATCGCAGAAAAAGTaGTTGACTCTGTTTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HLLVLVLGNSATHSFQHKKSQKK*LTLFGP Trigger: TGGACCAAACAGAGTCAATCACTTTTTCTGCGATTT...CTTGTGCTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR GCA 90 bp | TGTTGCACAATTAATATGGTTACCTGCACAAGATCAGGCCAATGCACAGTCCAGCAGTGGGCTACAAATTaGTATAAATCGGTCATAAGC | + |
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Preference number: 4 (lower is better) Translates to: CCTINMVTCTRSGQCTVQQWATN*YKSVIS Trigger: GCTTATGACCGATTTATAGCAATTTGTAGCCCACTG...CTGGACTGTGCATTGGCCTGATCTTGTGCAGGTAACCATATTAATTGTGCAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | TGTGATAACCACCATCATCTGAAGGTTGCCCCCACTGAAGGTAATCACAACTTTTTAATCCCAATAAAATaGATCCTGTCACTGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: CDNHHHLKVAPTEGNHNFLIPIK*ILSLQC Trigger: ACACTGCAGTGACAGGATTCATTTTATTGGGATTAA...AAAGTTGTGATTACCTTCAGTGGGGGCAACCTTCAGATGATGGTGGTTATCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | GAGAGACACTCATTCTCATTTTGGAATAAGGCTGCTGTTATGATACTGACCAAGCAAGCATATTGGGTGTaGCAGAAGATGAATAGCCTA | + |
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Preference number: 4 (lower is better) Translates to: ERHSFSFWNKAAVMILTKQAYWV*QKMNSL Trigger: TAGGCTATTCATCTTCTGTCACACCCAATATGCTTG...CTTGGTCAGTATCATAACAGCAGCCTTATTCCAAAATGAGAATGAGTGTCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR TCA 90 bp | GAGAGACACTCATTCTCATTTTGGAATAAGGCTGCTGTTATGATACTGACCAAGCGCAGAAAAAGTGATTaGCTCTGTTTGGTCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: ERHSFSFWNKAAVMILTKRRKSD*LCLVHK Trigger: TTTGTGGACCAAACAGAGTCAATCACTTTTTCTGCG...CTTGGTCAGTATCATAACAGCAGCCTTATTCCAAAATGAGAATGAGTGTCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR CCA 90 bp | TGTTGCACAATTAATATGGTTACCTGCACAAGATCAGGCCAATGCACAGTCCAGGGACACAAACCTGTGTaGACATTTTGTTTGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: CCTINMVTCTRSGQCTVQGHKPV*TFCLNK Trigger: TTTATTCAAACAAAATGTCCACACAGGTTTGTGTCC...CTGGACTGTGCATTGGCCTGATCTTGTGCAGGTAACCATATTAATTGTGCAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 72 bp | TTGACTCTTCTGGGAAAGTATTTTCATTTGCTCGTCTaGGTTCTTGGAAACTCAGCAACTCATTCTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTLLGKYFHLLV*VLGNSATHSFQ Trigger: CTGGAAAGAATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATGAAAATACTTTCCCAGAAGAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| 3UTR CAA 72 bp | CTTACAAGTTTGACTCTTCTGGGAAAGTATTTTCATTaGCTCGTCTTGGTTCTTGGAAACTCAGCAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LTSLTLLGKYFH*LVLVLGNSATH Trigger: ATGAGTTGCTGAGTTTCCAAGAACCAAGACGAGCAAATGAAAATACTTTCCCAGAAGAGTCAAACTTGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR CAA 90 bp | AAGGTTGCCCCCACTGAAGGTAATCACAACTTTGAAGAAAATACAGCCAAGGTACTCTCCACCAGGAAGTaGACAAGCATATTGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: KVAPTEGNHNFEENTAKVLSTRK*TSILGV Trigger: CACACCCAATATGCTTGTCAACTTCCTGGTGGAGAG...TACCTTGGCTGTATTTTCTTCAAAGTTGTGATTACCTTCAGTGGGGGCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS-3UTR CAA 90 bp | CATGAGATTTGGGGGAAATTTAATATTCAATCTAAGCCAGGTGGTAGTAGTGCTGTGTGGACATTTTGTTaGAATAAAGCAGTGGGCTAC | + |
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Preference number: 5 (lower is better) Translates to: HEIWGKFNIQSKPGGSSAVWTFC*NKAVGY Trigger: GTAGCCCACTGCTTTATTCAAACAAAATGTCCACAC...AGCACTACTACCACCTGGCTTAGATTGAATATTAAATTTCCCCCAAATCTCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216919.2 |
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| CDS TCA 72 bp | AAATATGGTCACAATGATGATGGAGCCAGCTGTGAATaGGGGAACAACTGCAGGGACACTGACATCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: KYGHNDDGASCE*GNNCRDTDIRT Trigger: TGTTCTGATGTCAGTGTCCCTGCAGTTGTTCCCTCATTCACAGCTGGCTCCATCATCATTGTGACCATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000078933.5 ENSMUST00000216919.2 |
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