Pregenerated sensors for OLFR5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096228Ensembl transcript IDs: ENSMUST00000086318.5, ENSMUST00000209866.4
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACACACACACACACCCCTCCTGGGAGCTTGGCCTGTGCTCCGACTaGTACAGATTTAGCTCTGAGATCAGATGCTCAGCAGGCCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: HTHTHPSWELGLCSD*YRFSSEIRCSAGQF Trigger: AAACTGGCCTGCTGAGCATCTGATCTCAGAGCTAAATCTGTAGCAGTCGGAGCACAGGCCAAGCTCCCAGGAGGGGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CCA 90 bp | CACACACACACACACACACACACACACACACACACACACCCCTCCTaGGAGCTTGGCCTGTGCTCCGACTGCTACAGATTTAGCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHTHPS*ELGLCSDCYRFSSE Trigger: CTCAGAGCTAAATCTGTAGCAGTCGGAGCACAGGCCAAGCTCCCAGGAGGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CCA 90 bp | GTCAGAGGAAGAAGGAAGAGTAATGAAGGTGGAAAGATGGAGTTTTaGGGACATAACAATGAGTGGGAGGGTGGGGTTGATATAATCAAG | + |
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Preference number: 1 (lower is better) Translates to: VRGRRKSNEGGKMEF*GHNNEWEGGVDIIK Trigger: CTTGATTATATCAACCCCACCCTCCCACTCATTGTTATGTCCCCAAAACTCCATCTTTCCACCTTCATTACTCTTCCTTCTTCCTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTAAAGGATATTACAGGTaGGGAGTGATGAGGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: RVVEATITSHQPPKILHGKGYYR*GVMRGA Trigger: AGCACCCCTCATCACTCCCCACCTGTAATATCCTTT...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGCTTCCTCCTGGGATCTaGAAACCCCACTTTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMLPPGI*KPHFSP Trigger: GGGGGAAAAGTGGGGTTTCCAGATCCCAGGAGGAAG...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTTTTCTTTAGGGATGTaGACCCTGCTAGCTTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: RVVEATITSHQPPKILHGFSLGM*TLLACS Trigger: TGAGCAAGCTAGCAGGGTCCACATCCCTAAAGAAAA...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTGGAAAGATGGAGTTTTaGGGACATAACAATGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: RVVEATITSHQPPKILHGGKMEF*GHNNEW Trigger: CCACTCATTGTTATGTCCCCAAAACTCCATCTTTCC...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGCCATTCTCTTCCTCCTaGGATCTGGAAACCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMPFSSS*DLETPL Trigger: AAGTGGGGTTTCCAGATCCCAGGAGGAAGAGAATGG...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTATGAAGGTGGAAAGATaGAGTTTTGGGGACATAACA | + |
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Preference number: 2 (lower is better) Translates to: RVVEATITSHQPPKILHGMKVER*SFGDIT Trigger: TGTTATGTCCCCAAAACTCCATCTTTCCACCTTCAT...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGTCCTATCCCAAAACCTaGCCAAAAAGCCCTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMSYPKT*PKSPSP Trigger: AGGAGAAGGGCTTTTTGGCCAGGTTTTGGGATAGGA...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGTCTGTCACTCACATATaGCATGTACGTGTCACATGT | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMSVTHI*HVRVTC Trigger: ACATGTGACACGTACATGTCATATGTGAGTGACAGA...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR GCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTATGTATACAGATAAATaGAGGAAAATACTCACGCAC | + |
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Preference number: 2 (lower is better) Translates to: RVVEATITSHQPPKILHGMYTDK*RKILTH Trigger: GTGCGTGAGTATTTTCCTGCATTTATCTGTATACAT...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGATATTTGGATGTCAGTaGCCACATGTTGGCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMIFGCQ*PHVGSQ Trigger: TTGTGAGCCAACATGTGGGCACTGACATCCAAATAT...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGGGTATCCACAGAGGTTaGAGATACATATCAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMGIHRG*RYISAV Trigger: AACAGCTGATATGTATCTCCAACCTCTGTGGATACC...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGAGTGATGAGGGGTGCTaGAAAATGATATATTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: GGHHHQPPATQDLAWLCMSDEGC*KMIYSG Trigger: TCCAGAATATATCATTTTCCAGCACCCCTCATCACT...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CAA 90 bp | GATTTGGGTGGATCATTAGGCTTCTTCAATAGCGGTAGAGAGCTATaGTCAATTGATGCCTGTTATAGGAGAGTATGTCATTTTTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: DLGGSLGFFNSGREL*SIDACYRRVCHFSL Trigger: TAAAGAAAAATGACATACTCTCCTATAACAGGCATCAATTGACAATAGCTCTCTACCGCTATTGAAGAAGCCTAATGATCCACCCAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR GCA 72 bp | AGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTaGATGGTTGTGTATGCCTCCTATCCCAAAACCTGG | + |
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Preference number: 3 (lower is better) Translates to: RPPSPATSHPRS*MVVYASYPKTW Trigger: CCAGGTTTTGGGATAGGAGGCATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR GCA 72 bp | ACACACCCCTCCTGGGAGCTTGGCCTGTGCTCCGACTaGTACAGATTTAGCTCTGAGATCAGATGCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: THPSWELGLCSD*YRFSSEIRCSA Trigger: TGCTGAGCATCTGATCTCAGAGCTAAATCTGTAGCAGTCGGAGCACAGGCCAAGCTCCCAGGAGGGGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CCA 72 bp | TTAGAGCACCGACTGCCCCTCCACAGGCCCCATATTTaGATGTCAGTGCCCACATGTTGGCTCACAACTGTC | + |
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Preference number: 3 (lower is better) Translates to: LEHRLPLHRPHI*MSVPTCWLTTV Trigger: GACAGTTGTGAGCCAACATGTGGGCACTGACATCCAAATATGGGGCCTGTGGAGGGGCAGTCGGTGCTCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CCA 72 bp | CACCATCACCAGCCACCAGCCACCCAAGATCTTGCATaGTTGTGTATGCCTCCTATCCCAAAACCTGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: HHHQPPATQDLA*LCMPPIPKPGQ Trigger: TTGGCCAGGTTTTGGGATAGGAGGCATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGAGGCCTGAGTTTGCCTaGGGGGCAAAGAAAATGTTT | + |
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Preference number: 3 (lower is better) Translates to: GGHHHQPPATQDLAWLCMRPEFA*GAKKMF Trigger: AAACATTTTCTTTGCCCCCAAGGCAAACTCAGGCCT...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGTGGTATCCACAGAGGTaGGAGATACATATCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: GGHHHQPPATQDLAWLCMWYPQR*EIHISC Trigger: ACAGCTGATATGTATCTCCAACCTCTGTGGATACCA...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CCA 72 bp | AGAAGGAAGAGTAATGAAGGTGGAAAGATGGAGTTTTaGGGACATAACAATGAGTGGGAGGGTGGGGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: RRKSNEGGKMEF*GHNNEWEGGVD Trigger: ATCAACCCCACCCTCCCACTCATTGTTATGTCCCCAAAACTCCATCTTTCCACCTTCATTACTCTTCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CCA 72 bp | TGTTATAGGAGAGTATGTCATTTTTCTTTAGGGATGTaGACCCTGCTAGCTTGCTCATGCTCATTCAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: CYRRVCHFSLGM*TLLACSCSFRQ Trigger: CTGCCTGAATGAGCATGAGCAAGCTAGCAGGGTCCACATCCCTAAAGAAAAATGACATACTCTCCTATAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR-3UTR CAA 90 bp | ATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCAGTCACAATAGCCAGAAAATGTTTTGGATaGAACCCTGGTGATGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: INLCSNVHSFQNMSVTIARKCFG*NPGDAC Trigger: GCAGGCATCACCAGGGTTCAATCCAAAACATTTTCT...GGCTATTGTGACTGACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR TCA 72 bp | CAGAAACAGAGTATAGGCTGTAAGTTTCTTGGGGCTTaGAGTAGTCACTGGTGGATATTAGGAATGATATCT | + |
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Preference number: 3 (lower is better) Translates to: QKQSIGCKFLGA*SSHWWILGMIS Trigger: AGATATCATTCCTAATATCCACCAGTGACTACTTCAAGCCCCAAGAAACTTACAGCCTATACTCTGTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR TCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTAGCAAGATGAACTGCTaGACCCTGGTCATGTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RVVEATITSHQPPKILHGSKMNC*TLVMLA Trigger: GGCCAACATGACCAGGGTTCAGCAGTTCATCTTGCT...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR GCA 90 bp | CGGGTGGTGGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGGATGCCAAAAGAATaGACTCTGTGCCCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RVVEATITSHQPPKILHGWMPKE*TLCPQG Trigger: TCCTTGTGGGCACAGAGTGCATTCTTTTGGCATCCA...ACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCCACCACCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CAA 72 bp | GAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTaGCATGGTTGTGTATGCCTCCTATCCCAAAACCTG | + |
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Preference number: 4 (lower is better) Translates to: EATITSHQPPKI*HGCVCLLSQNL Trigger: CAGGTTTTGGGATAGGAGGCATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CAA 72 bp | TCAGCAGGCCAGTTTGCCTGTTTCTCCCAGCTAGCTTaGCCAAGCCACCAACAACTGCCCAGGCTCTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SAGQFACFSQLA*PSHQQLPRLFC Trigger: ACAGAAGAGCCTGGGCAGTTGTTGGTGGCTTGGCAAAGCTAGCTGGGAGAAACAGGCAAACTGGCCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CAA 72 bp | CATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTaGTGTATGCCTCCTATCCCAAAACCTGGCCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: HHQPPATQDLAW*CMPPIPKPGQK Trigger: TTTTTGGCCAGGTTTTGGGATAGGAGGCATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| 3UTR CAA 72 bp | CCACAGGCCCCATATTTGGATGTCAGTGCCCACATGTaGGCTCACAACTGTCTAACCTTAGTTCTAGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: PQAPYLDVSAHM*AHNCLTLVLED Trigger: ATCCTCTAGAACTAAGGTTAGACAGTTGTGAGCCAACATGTGGGCACTGACATCCAAATATGGGGCCTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR CCA 90 bp | ATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCAGTCACAATAGCCAAGCCCAGGCAGACCTaGGGCCTCATGAGTACTGGG | + |
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Preference number: 4 (lower is better) Translates to: INLCSNVHSFQNMSVTIAKPRQT*GLMSTG Trigger: CCCAGTACTCATGAGGCCCCAGGTCTGCCTGGGCTT...GGCTATTGTGACTGACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR TCA 90 bp | ATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCAGTCACAATAGCCACATCTCCAGGCAGCTaGGGTTGCCCAAGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: INLCSNVHSFQNMSVTIATSPGS*GCPRRS Trigger: ACTTCTTCTTGGGCAACCTCAGCTGCCTGGAGATGT...GGCTATTGTGACTGACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR TCA 90 bp | GGTACAAAGAGAAATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCAGACCTGGGGCCTCATaGGTACTGGGTAGTGTAGTG | + |
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Preference number: 4 (lower is better) Translates to: GTKRNKSMQQRTQLSKYVRPGAS*VLGSVV Trigger: CACTACACTACCCAGTACTCATGAGGCCCCAGGTCT...GACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTATTTCTCTTTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR TCA 90 bp | GGTACAAAGAGAAATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCAGTCTACCAGCTCTGTaGGGGCCACATGGGTACATG | + |
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Preference number: 4 (lower is better) Translates to: GTKRNKSMQQRTQLSKYVSLPAL*GPHGYM Trigger: CATGTACCCATGTGGCCCTCACAGAGCTGGTAGACT...GACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTATTTCTCTTTGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR CCA 90 bp | GGTACAAAGAGAAATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCTCTGTGAGGGCCACATaGGTACATGACAGGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: GTKRNKSMQQRTQLSKYVSVRAT*VHDRLS Trigger: ACTCAACCTGTCATGTACCCATGTGGCCCTCACAGA...GACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTATTTCTCTTTGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR TCA 90 bp | GGTACAAAGAGAAATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCGGGTACATGACAGGTTaGGTAATGGGGAAACATCAC | + |
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Preference number: 4 (lower is better) Translates to: GTKRNKSMQQRTQLSKYVGYMTG*VMGKHH Trigger: GTGATGTTTCCCCATTACTCAACCTGTCATGTACCC...GACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTATTTCTCTTTGTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR GCA 90 bp | AACGTACACAGCTTTCAAAATATGTCAGTCACAATAGCCACATATGGCATAAACATCATACGCCATGGATaGCAAAAGAATGCACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: NVHSFQNMSVTIATYGINIIRHG*QKNALC Trigger: ACAGAGTGCATTCTTTTGGCATCCATGGCGTATGAT...GTTTATGCCATATGTGGCTATTGTGACTGACATATTTTGAAAGCTGTGTACGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS-3UTR CCA 90 bp | GGTACAAAGAGAAATAAATCTATGCAGCAACGTACACAGCTTTCAAAATATGTCATGAAGAAGAAGAGTTaGGTCATACAAGCTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GTKRNKSMQQRTQLSKYVMKKKS*VIQAMK Trigger: CTTCATAGCTTGTATGACCCAACTCTTCTTCTTCAT...GACATATTTTGAAAGCTGTGTACGTTGCTGCATAGATTTATTTCTCTTTGTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS GCA 90 bp | AGAGAAGGCCTTGTAGCGGGCAGTGGTAGAAGGCATGCGCAGAACTaGCCTGCCAATAGCCACATAGGAGGCCATAGTCGTGAGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: REGLVAGSGRRHAQN*PANSHIGGHSREEA Trigger: TGCTTCCTCACGACTATGGCCTCCTATGTGGCTATTGGCAGGGCAGTTCTGCGCATGCCTTCTACCACTGCCCGCTACAAGGCCTTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086318.5 ENSMUST00000209866.4 |
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| CDS-3UTR CAA 90 bp | GGAGGCCACCATCACCAGCCACCAGCCACCCAAGATCTTGCATGGTTGTGTATGGCAATGCATGTTGTCTaGATCATAGAAACCAATAGC | + |
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Preference number: 5 (lower is better) Translates to: GGHHHQPPATQDLAWLCMAMHVV*IIETNS Trigger: GCTATTGGTTTCTATGATCAAGACAACATGCATTGC...CATACACAACCATGCAAGATCTTGGGTGGCTGGTGGCTGGTGATGGTGGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209866.4 |
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| CDS TCA 72 bp | TCCAGCCTAGTGGACAATCCCAGCAAGATGAACTGCTaGACCCTGGTCATGTTGGCCAACGCCAGGGACCTC | + |
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Preference number: 6 (lower is better) Translates to: SSLVDNPSKMNC*TLVMLANARDL Trigger: GAGGTCCCTGGCGTTGGCCAACATGACCAGGGTTCAGCAGTTCATCTTGCTGGGATTGTCCACTAGGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086318.5 ENSMUST00000209866.4 |
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| CDS CAA 72 bp | GCACTCTGTGCCCACAAGGACAATGAAGAAGAAGAGTaGGGTCATACAAGCTATGAAGGGAATATGGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: ALCAHKDNEEEE*GHTSYEGNMVE Trigger: CTCTACCATATTCCCTTCATAGCTTGTATGACCCAACTCTTCTTCTTCATTGTCCTTGTGGGCACAGAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086318.5 ENSMUST00000209866.4 |
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| CDS CAA 90 bp | CAAAAGAATGCACTCTGTGCCCACAAGGACAATGAAGAAGAAGAGTaGGGTCATACAAGCTATGAAGGGAATATGGTAGAGTCCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: QKNALCAHKDNEEEE*GHTSYEGNMVESIP Trigger: TGGAATGGACTCTACCATATTCCCTTCATAGCTTGTATGACCCAACTCTTCTTCTTCATTGTCCTTGTGGGCACAGAGTGCATTCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086318.5 ENSMUST00000209866.4 |
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