Pregenerated sensors for OLFR498 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096679Ensembl transcript IDs: ENSMUST00000217616.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAAACAAACAATCACTTGTCAATATGCAGAGAATTGGACACTGTaGAAGGCTCTACAATATGTAGAACTTCTATACCACACCTCCTTT | + |
|
Preference number: 1 (lower is better) Translates to: TKQTITCQYAENWTL*KALQYVELLYHTSF Trigger: AAAGGAGGTGTGGTATAGAAGTTCTACATATTGTAGAGCCTTTCACAGTGTCCAATTCTCTGCATATTGACAAGTGATTGTTTGTTTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| 3UTR CCA 90 bp | ACAAATAAACAGTGTATTCAAGGCACAACAGAATGGTTACAAATATaGCCTCTTGTTAACACTTTTGGTATCCATATGCTCACATTAGAC | + |
|
Preference number: 1 (lower is better) Translates to: TNKQCIQGTTEWLQI*PLVNTFGIHMLTLD Trigger: GTCTAATGTGAGCATATGGATACCAAAAGTGTTAACAAGAGGCCATATTTGTAACCATTCTGTTGTGCCTTGAATACACTGTTTATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGTCAGGGATGTGTTGTGTTGGCTTGTTTAGGATAGCAATGAAATCTCAATGGCACCTAACACATCTATaGAAGCCAAAACCTATGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VSGMCCVGLFRIAMKSQWHLTHL*KPKPML Trigger: TAGCATAGGTTTTGGCTTTCATAGATGTGTTAGGTG...CCATTGAGATTTCATTGCTATCCTAAACAAGCCAACACAACACATCCCTGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCAGGGATGTGTTGTGTTGGCTTGTTTAGGATAGCAATGAAATCTCAATGGGTAGCTGAGGAGTTATaGGAAACTTCCAGAATGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VSGMCCVGLFRIAMKSQWVAEEL*ETSRMK Trigger: TTTCATTCTGGAAGTTTCCAATAACTCCTCAGCTAC...CCATTGAGATTTCATTGCTATCCTAAACAAGCCAACACAACACATCCCTGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| 3UTR CCA 72 bp | CAGTGTATTCAAGGCACAACAGAATGGTTACAAATATaGCCTCTTGTTAACACTTTTGGTATCCATATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QCIQGTTEWLQI*PLVNTFGIHML Trigger: GAGCATATGGATACCAAAAGTGTTAACAAGAGGCCATATTTGTAACCATTCTGTTGTGCCTTGAATACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGGGATGTGTTGTGTTGGCTTGTTTAGGATAGCAATGAAATCTCAATGGTCAACAGAAGCCAAGTaGCTGAGAATAAAGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: VSGMCCVGLFRIAMKSQWSTEAK*LRIKYM Trigger: CATGTACTTTATTCTCAGCCACTTGGCTTCTGTTGA...CCATTGAGATTTCATTGCTATCCTAAACAAGCCAACACAACACATCCCTGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGGGATGTGTTGTGTTGGCTTGTTTAGGATAGCAATGAAATCTCAATGGGGATACAGGCTTCTGTaGACATTTTTGTGGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGMCCVGLFRIAMKSQWGYRLL*TFLWNK Trigger: TTTATTCCACAAAAATGTCCACAGAAGCCTGTATCC...CCATTGAGATTTCATTGCTATCCTAAACAAGCCAACACAACACATCCCTGACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR TCA 90 bp | CAGAATGGTTACAAATATGGCCTCTTGTTAACACTTTTGGTATCCATATGCTCAAAAGCCAGCAGAAATTaGGGTAATAACAACAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNGYKYGLLLTLLVSICSKASRN*GNNNSN Trigger: GTTGCTGTTGTTATTACCTCAATTTCTGCTGGCTTT...TGAGCATATGGATACCAAAAGTGTTAACAAGAGGCCATATTTGTAACCATTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR CCA 90 bp | GCTAACCATGCTTCAGTAAAGCCTAAATACCTAAATATATACAGGTACAACAAGCTGTGGACATTTTTGTaGAATAAAGCAGTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANHASVKPKYLNIYRYNKLWTFL*NKAVGC Trigger: GCAACCCACTGCTTTATTCCACAAAAATGTCCACAG...CTTGTTGTACCTGTATATATTTAGGTATTTAGGCTTTACTGAAGCATGGTTAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR CCA 90 bp | ATGGAGCAAGTGGTATTAGAGCAAGAAAATATGATGGGCACCTGGATTTTATTCGTCATTGATTCTATTTaGTCCACAGAAGAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MEQVVLEQENMMGTWILFVIDSI*STEEQG Trigger: TCCTTGTTCTTCTGTGGACCAAATAGAATCAATGAC...GAATAAAATCCAGGTGCCCATCATATTTTCTTGCTCTAATACCACTTGCTCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR TCA 90 bp | GCTAACCATGCTTCAGTAAAGCCTAAATACCTAAATATATACAGGTACAACAAGCACAGTAGAAGTCATTaGTTCTATTTGGTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ANHASVKPKYLNIYRYNKHSRSH*FYLVHR Trigger: TCTGTGGACCAAATAGAATCAATGACTTCTACTGTG...CTTGTTGTACCTGTATATATTTAGGTATTTAGGCTTTACTGAAGCATGGTTAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||
| CDS-3UTR CAA 90 bp | CAGAATGGTTACAAATATGGCCTCTTGTTAACACTTTTGGTATCCATATGCTCACTTCTGTGGACATTTTaGTGGAATAAAGCAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QNGYKYGLLLTLLVSICSLLWTF*WNKAVG Trigger: ACCCACTGCTTTATTCCACAAAAATGTCCACAGAAG...TGAGCATATGGATACCAAAAGTGTTAACAAGAGGCCATATTTGTAACCATTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217616.3 |
||