Pregenerated sensors for OLFR49 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048153Ensembl transcript IDs: ENSMUST00000059996.7, ENSMUST00000216214.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTaGACCAAAAAGGGGGTGCTGTCAGGAGCAGACATGCCTTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: SHHNWSNSIDAQLLL*TKKGVLSGADMPLV Trigger: GACTAAAGGCATGTCTGCTCCTGACAGCACCCCCTTTTTGGTTCAAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGGGACTAAGCATGTGGTGGTCAGTCCCATTCAGACCACCACAACACTAAATACCTGCCTGGGTCCATaGCACCAGCTCCTACCACTG | + |
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Preference number: 2 (lower is better) Translates to: PGTKHVVVSPIQTTTTLNTCLGP*HQLLPL Trigger: CAGTGGTAGGAGCTGGTGGCATGGACCCAGGCAGGT...ATTTAGTGTTGTGGTGGTCTGAATGGGACTGACCACCACATGCTTAGTCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTGGCTGGGCAAGGACCTaGCTGGGTCCATGCCACCAG | + |
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Preference number: 2 (lower is better) Translates to: QWLSHHNWSNSIDAQLLLGWART*LGPCHQ Trigger: CTGGTGGCATGGACCCAGGCAGGTCCTTGCCCAGCC...AAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTGGGCAAGGACCTGCCTaGGTCCATGCCACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SGYLTTTGATPLMLNFFFGQGPA*VHATSS Trigger: GGAGCTGGTGGCATGGACCCAGGCAGGTCCTTGCCC...AAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAAACCTCAAGCCCCATCACCCCAAATGACCACCTCCTTCAACAAGGCTCCACTGGAGCAACTCCATTaGTGCTCAACTTCTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LKPQAPSPQMTTSFNKAPLEQLH*CSTSSL Trigger: CAAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAG...TGGAGCCTTGTTGAAGGAGGTGGTCATTTGGGGTGATGGGGCTTGAGGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGCAAGAAGCCTGTGATTaGACAGGGAAAGAAAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGQEACD*TGKERR Trigger: CCGCCTTTCTTTCCCTGTCCAATCACAGGCTTCTTG...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGCAGGGACTAAGCATGTaGTGGTCAGTCCCATTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGQGLSM*WSVPFR Trigger: TCTGAATGGGACTGACCACCACATGCTTAGTCCCTG...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACCTCAAGCCCCATCACCCCAAATGACCACCTCCTTCAACAAGGCTCCATTCTTCCACTTACTCTaGTGCTCCCCAAATCATAGA | + |
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Preference number: 2 (lower is better) Translates to: LKPQAPSPQMTTSFNKAPFFHLL*CSPNHR Trigger: TCTATGATTTGGGGAGCACCAGAGTAAGTGGAAGAA...TGGAGCCTTGTTGAAGGAGGTGGTCATTTGGGGTGATGGGGCTTGAGGTTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGACTAAGCATGTGGTGGTCAGTCCCATTCAGACCACCACAACACTAAATGACAGTCTGAAAGGCTaGATAGGCAAGCTAGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: PGTKHVVVSPIQTTTTLNDSLKG*IGKLAV Trigger: AACAGCTAGCTTGCCTATCCAGCCTTTCAGACTGTC...ATTTAGTGTTGTGGTGGTCTGAATGGGACTGACCACCACATGCTTAGTCCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGCCAGTCACTATGTGCTaGGAAAGTTCATTGCTTAGC | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGPVTMC*ESSLLS Trigger: GCTAAGCAATGAACTTTCTCAGCACATAGTGACTGG...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGGGAGAAGAAGGAAAATaGAGGACGATTCAGATTCCC | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGGEEGK*RTIQIP Trigger: GGGAATCTGAATCGTCCTTCATTTTCCTTCTTCTCC...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCATGTGGTGGTCAGTGTGTATTTCCAGGTGTaGACATGTCTGTTCACATGG | + |
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Preference number: 2 (lower is better) Translates to: LLILKQLHSPGTKHVVVSVYFQV*TCLFTW Trigger: CCATGTGAACAGACATGTGCACACCTGGAAATACAC...ACTGACCACCACATGCTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | TCAACAAGGCTCCACCTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCTTCTCTGTAGGAGATaGAATGGATGCTTACGATGC | + |
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Preference number: 2 (lower is better) Translates to: STRLHLLILKQLHSPGTKLLCRR*NGCLRC Trigger: GCATCGTAAGCATCCATTCCATCTCCTACAGAGAAG...CTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAGGTGGAGCCTTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | TCAACAAGGCTCCACCTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCTATCTCACCACAACTaGAGCAACTCCATTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: STRLHLLILKQLHSPGTKLSHHN*SNSIDA Trigger: AGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAG...CTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAGGTGGAGCCTTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | TGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTAGAAAATCTAATGTTAGGCCCTaGAGCTTGGACAGCATGCAC | + |
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Preference number: 2 (lower is better) Translates to: WIGKLAVLEKLWKQDFRKSNVRP*SLDSMH Trigger: GTGCATGCTGTCCAAGCTTCAGGGCCTAACATTAGA...TTTTCTAAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAACCTCAAGCCCCATCACCCCAAATGACCACCTCCTTCAACAAGGCTCCATCTGAAATTATTGTGTaGGCATCTTGTGAATTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LKPQAPSPQMTTSFNKAPSEIIV*ASCELR Trigger: TCTCAATTCACAAGATGCCCACACAATAATTTCAGA...TGGAGCCTTGTTGAAGGAGGTGGTCATTTGGGGTGATGGGGCTTGAGGTTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGTTACGATCTAGCCCTTaGTTTGTGTTAATCATCCTA | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGLRSSP*FVLIIL Trigger: TAGGATGATTAACACAAATCAAGGGCTAGATCGTAA...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGGTAAATATTGAGCCTTaGTCAGAGAACTTTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGVNIEP*SENFVL Trigger: CAAGACAAAGTTCTCTGATCAAGGCTCAATATTTAC...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | AATCAAACAAGGGGCTGGAATGGAAGGTCCCAGAATCTCAGCATCCCAAAGTGTTATCACTCCCCACATTaGTTTTTCTTCCACTTACTC | + |
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Preference number: 2 (lower is better) Translates to: NQTRGWNGRSQNLSIPKCYHSPH*FFFHLL Trigger: GAGTAAGTGGAAGAAAAACCAATGTGGGGAGTGATA...ACACTTTGGGATGCTGAGATTCTGGGACCTTCCATTCCAGCCCCTTGTTTGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGGTTCTGGAAAAGCTCTaGAAGCAAGACTTTAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGVLEKL*KQDFRK Trigger: TTTTCTAAAGTCTTGCTTCCAGAGCTTTTCCAGAAC...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTAGGAGATGGAATGGATaGTTACGATGCATGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: SGYLTTTGATPLMLNFFFRRWNG*LRCMSE Trigger: TTCTGACATGCATCGTAAGCATCCATTCCATCTCCT...AAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTCAGCTGTTATGTGGATaGTGTGGATCTAATGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: SGYLTTTGATPLMLNFFFQLLCG*CGSNVR Trigger: CCTAACATTAGATCCACAGCATCCACATAACAGCTG...AAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CCA 90 bp | TGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTAGAAAAAATCAAACAAGGGGCTaGAATGGAAGGTCCCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: WIGKLAVLEKLWKQDFRKNQTRG*NGRSQN Trigger: ATTCTGGGACCTTCCATTCCAGCCCCTTGTTTGATT...TTTTCTAAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTTACTTTTATCAACTTTaGAGAGAACCAGCAACGAAG | + |
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Preference number: 2 (lower is better) Translates to: SGYLTTTGATPLMLNFFFYFYQL*REPATK Trigger: CTTCGTTGCTGGTTCTCTTCAAAGTTGATAAAAGTA...AAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR TCA 72 bp | CTAATGTTAGGCCCTGAAGCTTGGACAGCATGCACTTaGCCCACTAAACTCTCTCCTCAGCCAAGAGAATAT | + |
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Preference number: 3 (lower is better) Translates to: LMLGPEAWTACT*PTKLSPQPREY Trigger: ATATTCTCTTGGCTGAGGAGAGAGTTTAGTGGGTCAAGTGCATGCTGTCCAAGCTTCAGGGCCTAACATTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR TCA 72 bp | AACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTaGACCAAAAAGGGGGTGCTGTCAGGAGCAGACATG | + |
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Preference number: 3 (lower is better) Translates to: NWSNSIDAQLLL*TKKGVLSGADM Trigger: CATGTCTGCTCCTGACAGCACCCCCTTTTTGGTTCAAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCATGTGGTGGTCAGTACTGGAGCAACTCCATaGATGCTCAACTTCTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LLILKQLHSPGTKHVVVSTGATP*MLNFFF Trigger: AAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGT...ACTGACCACCACATGCTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCTGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTCTATCACTCCCCACATaGGTTTTTCTTCCACTTACT | + |
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Preference number: 3 (lower is better) Translates to: KGWIGKLAVLEKLWKQDFLSLPT*VFLPLT Trigger: AGTAAGTGGAAGAAAAACCAATGTGGGGAGTGATAG...AAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCAGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCATGTGGTGGTCAGTCTTGATCAGAGAACTTaGTCTTGGCTCGTTATTTCT | + |
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Preference number: 3 (lower is better) Translates to: LLILKQLHSPGTKHVVVSLDQRT*SWLVIS Trigger: AGAAATAACGAGCCAAGACAAAGTTCTCTGATCAAG...ACTGACCACCACATGCTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | TCAACAAGGCTCCACCTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGTTGGCTCTGAAATTATaGTGTGGGCATCTTGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: STRLHLLILKQLHSPGTKLALKL*CGHLVN Trigger: ATTCACAAGATGCCCACACAATAATTTCAGAGCCAA...CTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAGGTGGAGCCTTGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTATACAAAAATTGGTTTaGTCAAAGGAGGGCGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGYLTTTGATPLMLNFFFIQKLV*SKEGEL Trigger: CAGCTCGCCCTCCTTTGACAAAACCAATTTTTGTAT...AAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR TCA 72 bp | GGTGGTCAGTCCCATTCAGACCACCACAACACTAAATaGTCCAATTTCTTTATGAGGGTACTAAGTCCTATG | + |
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Preference number: 3 (lower is better) Translates to: GGQSHSDHHNTK*SNFFMRVLSPM Trigger: CATAGGACTTAGTACCCTCATAAAGAAATTGGATCATTTAGTGTTGTGGTGGTCTGAATGGGACTGACCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR CCA 72 bp | AAATACAAAAATTGGTTTTGTCAAAGGAGGGCGAGCTaGCATTATTTGCCTTCCAGTCACTATGTGCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: KYKNWFCQRRAS*HYLPSSHYVLR Trigger: TCTCAGCACATAGTGACTGGAAGGCAAATAATGCCAGCTCGCCCTCCTTTGACAAAACCAATTTTTGTATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | AATGGAAGGTCCCAGAATCTCAGCATCCCAAAGTGTGAATCTTGTCTTTCTCTTCAGAGTACTGGTATATaGGAATTTTTGTCTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: NGRSQNLSIPKCESCLSLQSTGI*EFLSSL Trigger: CAGAGAAGACAAAAATTCCAATATACCAGTACTCTG...AAGAGAAAGACAAGATTCACACTTTGGGATGCTGAGATTCTGGGACCTTCCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | TGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTAGAAAAGAAGCTCTTACAATATaGTTTAGTCCATGCTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: WIGKLAVLEKLWKQDFRKEALTI*FSPCLL Trigger: AAGCAAGCATGGACTAAACAATATTGTAAGAGCTTC...TTTTCTAAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | TGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTAGAAAATCTGGCTTTCAATGTTaGAGTTGTCTCTGGTTTATT | + |
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Preference number: 3 (lower is better) Translates to: WIGKLAVLEKLWKQDFRKSGFQC*SCLWFI Trigger: AATAAACCAGAGACAACTCAAACATTGAAAGCCAGA...TTTTCTAAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR-3UTR CAA 90 bp | GACATTTTAGACTCAGCCTGTTCCAGAGCTGTCTCCATATACAGAAACATAAACCCTATCTTGTTGATCTaGTTAGTTTCATTGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: DILDSACSRAVSIYRNINPILLI*LVSLQL Trigger: CAGTTGCAATGAAACTAACAAGATCAACAAGATAGG...GTTTATGTTTCTGTATATGGAGACAGCTCTGGAACAGGCTGAGTCTAAAATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR CCA 72 bp | CTGGTATATTGGAATTTTTGTCTTCTCTGTAGGAGATaGAATGGATGCTTACGATGCATGTCAGAAACTACA | + |
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Preference number: 3 (lower is better) Translates to: LVYWNFCLLCRR*NGCLRCMSETT Trigger: TGTAGTTTCTGACATGCATCGTAAGCATCCATTCCATCTCCTACAGAGAAGACAAAAATTCCAATATACCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR CCA 72 bp | AAACATCAAGACTTAACACACAGAGTACTGGTATATTaGAATTTTTGTCTTCTCTGTAGGAGATGGAATGGA | + |
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Preference number: 3 (lower is better) Translates to: KHQDLTHRVLVY*NFCLLCRRWNG Trigger: TCCATTCCATCTCCTACAGAGAAGACAAAAATTCCAATATACCAGTACTCTGTGTGTTAAGTCTTGATGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR TCA 90 bp | CTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCATGTGGTGGTCAGTGCCACCACCTTGTTATaGTCCTCCCCCTGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: LLILKQLHSPGTKHVVVSATTLL*SSPCPF Trigger: GAATGGACAGGGGGAGGATCATAACAAGGTGGTGGC...ACTGACCACCACATGCTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTGTGGCCATAGCAGGTaGCAGTCACAGCCAGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: QWLSHHNWSNSIDAQLLLCGHSR*QSQPEC Trigger: GCACTCTGGCTGTGACTGCCACCTGCTATGGCCACA...AAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR GCA 90 bp | CTGAAACCTCAAGCCCCATCACCCCAAATGACCACCTCCTTCAACAAGGCTCCATGTTCCCTAAATACCTaGTTCACCTGCTTGTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: LKPQAPSPQMTTSFNKAPCSLNT*FTCLFL Trigger: GAGGAACAAGCAGGTGAAGCAGGTATTTAGGGAACA...TGGAGCCTTGTTGAAGGAGGTGGTCATTTGGGGTGATGGGGCTTGAGGTTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR TCA 90 bp | TCGTATCTGATCCCCAAGATCAGGTTTAGAACAAGAAACGGGGTCTGTCCTGGGCAGACCGGACATACATaGAGATACAGCTGCCATAGA | + |
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Preference number: 4 (lower is better) Translates to: SYLIPKIRFRTRNGVCPGQTGHT*RYSCHR Trigger: TCTATGGCAGCTGTATCTTCATGTATGTCCGGTCTG...CCCAGGACAGACCCCGTTTCTTGTTCTAAACCTGATCTTGGGGATCAGATACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| 3UTR CAA 72 bp | CCCAGTGGCTATCTCACCACAACTGGAGCAACTCCATaGATGCTCAACTTCTTCTTTGAACCAAAAAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PSGYLTTTGATP*MLNFFFEPKRG Trigger: CCCCCTTTTTGGTTCAAAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTACCAGATCTCCAGCATaGCAAAGTTGCGGAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QWLSHHNWSNSIDAQLLLTRSPA*QSCGGS Trigger: ACTTCCTCCGCAACTTTGCCATGCTGGAGATCTGGT...AAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CCA 90 bp | CTGAAACCTCAAGCCCCATCACCCCAAATGACCACCTCCTTCAACAAGGCTCCAGTAGAAAGAACTCAGTaGTGCCAAGGAAGAAATAGA | + |
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Preference number: 4 (lower is better) Translates to: LKPQAPSPQMTTSFNKAPVERTQ*CQGRNR Trigger: TCTATTTCTTCCTTGGCACCACTGAGTTCTTTCTAC...TGGAGCCTTGTTGAAGGAGGTGGTCATTTGGGGTGATGGGGCTTGAGGTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR GCA 90 bp | CCAGGGACTAAGCATGTGGTGGTCAGTCCCATTCAGACCACCACAACACTAAATGAAAGAACTCAGTGGTaGCAAGGAAGAAATAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGTKHVVVSPIQTTTTLNERTQW*QGRNRG Trigger: TCCTCTATTTCTTCCTTGGCACCACTGAGTTCTTTC...ATTTAGTGTTGTGGTGGTCTGAATGGGACTGACCACCACATGCTTAGTCCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CCA 90 bp | CTGAAACCTCAAGCCCCATCACCCCAAATGACCACCTCCTTCAACAAGGCTCCAAAGGAATGTGTAGAATaGTATAGAGAATGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKPQAPSPQMTTSFNKAPKECVE*YRECGH Trigger: ATGGCCACATTCTCTATACCATTCTACACATTCCTT...TGGAGCCTTGTTGAAGGAGGTGGTCATTTGGGGTGATGGGGCTTGAGGTTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CCA 90 bp | CAGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTGAGCAAAACACAAGCTaGACACAGACTCTTTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QWLSHHNWSNSIDAQLLLEQNTS*TQTLLL Trigger: GAGCAAAAGAGTCTGTGTCCAGCTTGTGTTTTGCTC...AAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR TCA 90 bp | TGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTAGAAAACAATCCAGACATCCATaGGCAAAACACAAGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: WIGKLAVLEKLWKQDFRKQSRHP*AKHKLD Trigger: GTCCAGCTTGTGTTTTGCTCATGGATGTCTGGATTG...TTTTCTAAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR TCA 90 bp | GACATTTTAGACTCAGCCTGTTCCAGAGCTGTCTCCATATACAGAAACATAAACGTGTCACTACAGTGTTaGGCAATGCCACCACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: DILDSACSRAVSIYRNINVSLQC*AMPPPC Trigger: ACAAGGTGGTGGCATTGCTCAACACTGTAGTGACAC...GTTTATGTTTCTGTATATGGAGACAGCTCTGGAACAGGCTGAGTCTAAAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR TCA 90 bp | TCAACAAGGCTCCACCTTCTAATCCTCAAACAGCTTCATTCCCCAGGGACTAAGCTGCTGAAATACAATTaGACTAGGAACTATGATGAG | + |
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Preference number: 4 (lower is better) Translates to: STRLHLLILKQLHSPGTKLLKYN*TRNYDE Trigger: CTCATCATAGTTCCTAGTTCAATTGTATTTCAGCAG...CTTAGTCCCTGGGGAATGAAGCTGTTTGAGGATTAGAAGGTGGAGCCTTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR TCA 90 bp | GACATTTTAGACTCAGCCTGTTCCAGAGCTGTCTCCATATACAGAAACATAAACGACACCACAATAATATaGGAGGAGCAAGTTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DILDSACSRAVSIYRNINDTTII*EEQVEK Trigger: CTTCTCAACTTGCTCCTCTCATATTATTGTGGTGTC...GTTTATGTTTCTGTATATGGAGACAGCTCTGGAACAGGCTGAGTCTAAAATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR GCA 90 bp | GACATTTTAGACTCAGCCTGTTCCAGAGCTGTCTCCATATACAGAAACATAAACTACAGTGTTGAGCAATaGCACCACCTTGTTATGATC | + |
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Preference number: 4 (lower is better) Translates to: DILDSACSRAVSIYRNINYSVEQ*HHLVMI Trigger: GATCATAACAAGGTGGTGGCATTGCTCAACACTGTA...GTTTATGTTTCTGTATATGGAGACAGCTCTGGAACAGGCTGAGTCTAAAATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CCA 90 bp | GACATTTTAGACTCAGCCTGTTCCAGAGCTGTCTCCATATACAGAAACATAAACTATGAGTTCCATAAGTaGAAAGTTGTCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: DILDSACSRAVSIYRNINYEFHK*KVVTEE Trigger: TTCTTCTGTGACAACTTTCCACTTATGGAACTCATA...GTTTATGTTTCTGTATATGGAGACAGCTCTGGAACAGGCTGAGTCTAAAATGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS TCA 90 bp | CAGGAGAAAGCCCAGGAATATGAGCACCTGCAGCTCACAGGCATCTaGCAGCCCCAGCAAAATAAACTCAGTAACAGTAGTGCTGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: QEKAQEYEHLQLTGI*QPQQNKLSNSSAVR Trigger: GCGAACAGCACTACTGTTACTGAGTTTATTTTGCTGGGGCTGTCAGATGCCTGTGAGCTGCAGGTGCTCATATTCCTGGGCTTTCTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059996.7 ENSMUST00000216214.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCTGGATAGGCAAGCTAGCTGTTCTGGAAAAGCTCTGGAAGCAAGACTTTGGTGTCACTACAGTGTaGAGCAATGCCACCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: KGWIGKLAVLEKLWKQDFGVTTV*SNATTL Trigger: CAAGGTGGTGGCATTGCTCAACACTGTAGTGACACC...AAAGTCTTGCTTCCAGAGCTTTTCCAGAACAGCTAGCTTGCCTATCCAGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CAA 90 bp | TGTGTATTTCCAGGTGTGCACATGTCTGTTCACATGGGGCAAGTGGTAACTGTCGCTTTCTTCCTCTCCTaGGCTGAAGGAATGTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: CVFPGVHMSVHMGQVVTVAFFLS*AEGMCR Trigger: TCTACACATTCCTTCAGCCAAGGAGAGGAAGAAAGC...GACAGTTACCACTTGCCCCATGTGAACAGACATGTGCACACCTGGAAATACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGCTATCTCACCACAACTGGAGCAACTCCATTGATGCTCAACTTCTTCTTTGTCCTGTGATGATGTaGGTTAGCATCTTGGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QWLSHHNWSNSIDAQLLLCPVMM*VSILGK Trigger: CTTCCCCAAGATGCTAACCAACATCATCACAGGACA...AAGAAGAAGTTGAGCATCAATGGAGTTGCTCCAGTTGTGGTGAGATAGCCACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CAA 90 bp | GACATTTTAGACTCAGCCTGTTCCAGAGCTGTCTCCATATACAGAAACATAAACATGTTGGTTAGCATCTaGGGGAAGATGACAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: DILDSACSRAVSIYRNINMLVSI*GKMTEV Trigger: CACCTCTGTCATCTTCCCCAAGATGCTAACCAACAT...GTTTATGTTTCTGTATATGGAGACAGCTCTGGAACAGGCTGAGTCTAAAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS-3UTR CAA 90 bp | TTGATCAGAGAACTTTGTCTTGGCTCGTTATTTCTCTCACCATTCTTCCCATTCTGTCTGGCTGAACTTTaGGAACTTGCTTACGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: LIRELCLGSLFLSPFFPFCLAEL*ELAYVF Trigger: GAACACGTAAGCAAGTTCCAAAAGTTCAGCCAGACA...GAATGGGAAGAATGGTGAGAGAAATAACGAGCCAAGACAAAGTTCTCTGATCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216214.2 |
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| CDS GCA 90 bp | GAAATTGGCAATAACAAAACCCAGGAACTCTACCAGGCTGGTATCTaGACATATGAGTTCCATAAGTGGAAAGTTGTCACAGAAGAAATG | + |
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Preference number: 5 (lower is better) Translates to: EIGNNKTQELYQAGI*TYEFHKWKVVTEEM Trigger: CATTTCTTCTGTGACAACTTTCCACTTATGGAACTCATATGTGCAGATACCAGCCTGGTAGAGTTCCTGGGTTTTGTTATTGCCAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059996.7 ENSMUST00000216214.2 |
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| CDS GCA 72 bp | GGGGTTGAGTGTGGGTGTCACTACAGTGTTGAGCAATaGCACCACCTTGTTATGATCCTCCCCCTGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: GVECGCHYSVEQ*HHLVMILPLSI Trigger: AATGGACAGGGGGAGGATCATAACAAGGTGGTGGCATTGCTCAACACTGTAGTGACACCCACACTCAACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059996.7 ENSMUST00000216214.2 |
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| CDS TCA 72 bp | GCCCAGGAATATGAGCACCTGCAGCTCACAGGCATCTaGCAGCCCCAGCAAAATAAACTCAGTAACAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: AQEYEHLQLTGI*QPQQNKLSNSS Trigger: ACTACTGTTACTGAGTTTATTTTGCTGGGGCTGTCAGATGCCTGTGAGCTGCAGGTGCTCATATTCCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059996.7 ENSMUST00000216214.2 |
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| CDS TCA 72 bp | ACTAGGAACTATGATGAGAAGCAATCCAGACATCCATaGGCAAAACACAAGCTGGACACAGACTCTTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: TRNYDEKQSRHP*AKHKLDTDSFA Trigger: AGCAAAAGAGTCTGTGTCCAGCTTGTGTTTTGCTCATGGATGTCTGGATTGCTTCTCATCATAGTTCCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059996.7 ENSMUST00000216214.2 |
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| CDS GCA 72 bp | AATAACAAAACCCAGGAACTCTACCAGGCTGGTATCTaGACATATGAGTTCCATAAGTGGAAAGTTGTCACA | + |
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Preference number: 6 (lower is better) Translates to: NNKTQELYQAGI*TYEFHKWKVVT Trigger: TGTGACAACTTTCCACTTATGGAACTCATATGTGCAGATACCAGCCTGGTAGAGTTCCTGGGTTTTGTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059996.7 ENSMUST00000216214.2 |
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