Pregenerated sensors for OLFR488 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096465Ensembl transcript IDs: ENSMUST00000072968.2, ENSMUST00000211508.3, ENSMUST00000215173.2
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTAGGAGTGGTAAGAAGAGAAGATTATGGGATCCACAGTAAATaGGTACAAGTAGGCAGAGAAGGCTATAGCAGGTGTTGCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: EVGVVRREDYGIHSK*VQVGREGYSRCCRA Trigger: AGCTCTGCAACACCTGCTATAGCCTTCTCTGCCTACTTGTACCCATTTACTGTGGATCCCATAATCTTCTCTTCTTACCACTCCTACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGCATCAGAGTGCCAAGGCTATAGCAGGTGTTaGAGAGCTAGGGATGAGACT | + |
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Preference number: 2 (lower is better) Translates to: RERERERERERERASECQGYSRC*RARDET Trigger: AGTCTCATCCCTAGCTCTGCAACACCTGCTATAGCC...TTGGCACTCTGATGCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGCATCAGAGTGCCAATTGTTGTGTAGGACATaGTGCCATGGAGCTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: RERERERERERERASECQLLCRT*CHGAEG Trigger: TCCTTCAGCTCCATGGCACCATGTCCTACACAACAA...TTGGCACTCTGATGCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 90 bp | GAGCAGGCAGTTCCAAAGAGGAGGAGAGCAAACTCCAGGAGGGATTaGCAAACATGTCTCAGGGGAGTCGAGGAAGAGATTACAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: EQAVPKRRRANSRRD*QTCLRGVEEEITAP Trigger: TGGGGCTGTAATCTCTTCCTCGACTCCCCTGAGACATGTTTGCAAATCCCTCCTGGAGTTTGCTCTCCTCCTCTTTGGAACTGCCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 90 bp | ATTGGCTCTCACACATTGAGAGATGCAGTCCTCTGTATACCAGTCTaGCTAACTTCTGGAACACATAAGTTAGCCGCCCCCAAACACTGG | + |
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Preference number: 2 (lower is better) Translates to: IGSHTLRDAVLCIPV*LTSGTHKLAAPKHW Trigger: CCAGTGTTTGGGGGCGGCTAACTTATGTGTTCCAGAAGTTAGCAAGACTGGTATACAGAGGACTGCATCTCTCAATGTGTGAGAGCCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR TCA 90 bp | GTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTATGCCTAAGTCAAGGTCTATaGAGTGAAACCACACCTAAC | + |
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Preference number: 2 (lower is better) Translates to: VKIDVESGKGRVFVACVCLSQGL*SETTPN Trigger: GTTAGGTGTGGTTTCACTTCATAGACCTTGACTTAG...GCATACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAAACCAAAGAAGGACAGTATACAAACACACCTTCTATCACCACCACCATGATATTACAAGCAAATaGACCCAGGAAGCAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: TENQRRTVYKHTFYHHHHDITSK*TQEASC Trigger: GCAGCTTGCTTCCTGGGTCCATTTGCTTGTAATATC...ATGGTGGTGGTGATAGAAGGTGTGTTTGTATACTGTCCTTCTTTGGTTTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCTGCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATTTGTTGTGTAGGACATaGTGCCATGGAGCTGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: EPAIISLMSRHSIKPISNLLCRT*CHGAEG Trigger: TCCTTCAGCTCCATGGCACCATGTCCTACACAACAA...ATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGCAGGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTAGCTTATAACCAAATCTaGGATGATGGTCACATTAGT | + |
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Preference number: 2 (lower is better) Translates to: VVKIDVESGKGRVFVACVAYNQI*DDGHIS Trigger: ACTAATGTGACCATCATCTCAGATTTGGTTATAAGC...TACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAGAGACATTACCTCAGAGTAAGGGGCTGTTAAAAAGATATTACAAGCAAGCTGGAGGTGATGAATaGCTACAAAGAAACATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QGETLPQSKGLLKRYYKQAGGDE*LQRNIA Trigger: AGCAATGTTTCTTTGTAGTCATTCATCACCTCCAGC...TTGCTTGTAATATCTTTTTAACAGCCCCTTACTCTGAGGTAATGTCTCTCCTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGAAAACCAAAGAAGGACAGTATACAAACACACCTTCTATCACCACCACCATGATCCATCCTTCTGCTaGATCCAAAACCATATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TENQRRTVYKHTFYHHHHDPSFC*IQNHIL Trigger: CAAAATATGGTTTTGGATGCAGCAGAAGGATGGATC...ATGGTGGTGGTGATAGAAGGTGTGTTTGTATACTGTCCTTCTTTGGTTTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 90 bp | CATAGTGTTTGTTGTGTAGGACATGGTGCCATGGAGCTGAAGGAGTaGAGGATGAAGGTAATCATGTTCAAATATATTCTATTAGGTTCA | + |
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Preference number: 2 (lower is better) Translates to: HSVCCVGHGAMELKE*RMKVIMFKYILLGS Trigger: TGAACCTAATAGAATATATTTGAACATGATTACCTTCATCCTCAACTCCTTCAGCTCCATGGCACCATGTCCTACACAACAAACACTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR TCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGGCTGGAGGTGATGAATaGCTACAAAGAAACATTGCT | + |
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Preference number: 2 (lower is better) Translates to: AIISLMSRHSIKPISNDLAGGDE*LQRNIA Trigger: AGCAATGTTTCTTTGTAGTCATTCATCACCTCCAGC...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 90 bp | AGGACCTGGGCACAGTGTTCAAACCTAGTTGAGGTTTTACTACAATaGATATTTTCCAGAAGAATGAGAGTCAATTTCCTTTATGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: RTWAQCSNLVEVLLQ*IFSRRMRVNFLYEC Trigger: ACACTCATAAAGGAAATTGACTCTCATTCTTCTGGAAAATATCAATTGTAGTAAAACCTCAACTAGGTTTGAACACTGTGCCCAGGTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 90 bp | GAAATACTGGAAAAGCTGGAGGTGATGAATGACTACAAAGAAACATaGCTTTCAGGACATAAAAGAATGGCTCATGTAGGTATGACTCAT | + |
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Preference number: 2 (lower is better) Translates to: EILEKLEVMNDYKET*LSGHKRMAHVGMTH Trigger: ATGAGTCATACCTACATGAGCCATTCTTTTATGTCCTGAAAGCAATGTTTCTTTGTAGTCATTCATCACCTCCAGCTTTTCCAGTATTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGAGAGACATTACCTCAGAGTAAGGGGCTGTTAAAAAGATATTACAAGCAAGCTTATAACCAAATCTaGGATGATGGTCACATTAGT | + |
|
Preference number: 2 (lower is better) Translates to: QGETLPQSKGLLKRYYKQAYNQI*DDGHIS Trigger: ACTAATGTGACCATCATCTCAGATTTGGTTATAAGC...TTGCTTGTAATATCTTTTTAACAGCCCCTTACTCTGAGGTAATGTCTCTCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGAATAGCTATACACACTaGAAGAAACAGATTAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: AIISLMSRHSIKPISNDLNSYTH*KKQIRA Trigger: GGCCCTAATCTGTTTCTTCCAGTGTGTATAGCTATT...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 90 bp | TTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGTCATaGAACTCAGGATTAGTTCATCTTCCAACCATTATCAGAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LMSRHSIKPISNDLS*NSGLVHLPTIIRAN Trigger: ATTTGCTCTGATAATGGTTGGAAGATGAACTAATCCTGAGTTCAATGACAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR TCA 72 bp | GCAGGTGTTGCAGAGCTAGGGATGAGACTCGGGGATTaGACTTGGAGGAGAAGAGAGAGTGATGAAGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: AGVAELGMRLGD*TWRRRESDEGL Trigger: AAGACCTTCATCACTCTCTCTTCTCCTCCAAGTTCAATCCCCGAGTCTCATCCCTAGCTCTGCAACACCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR TCA 72 bp | TGGCACAGGAGTGACCAAACTCTAAGTCAAGGTCTATaGAGTGAAACCACACCTAACACTACTGTCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: WHRSDQTLSQGL*SETTPNTTVRA Trigger: GGCCCTGACAGTAGTGTTAGGTGTGGTTTCACTTCATAGACCTTGACTTAGAGTTTGGTCACTCCTGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR GCA 72 bp | TTCCAAAGAGGAGGAGAGCAAACTCCAGGAGGGATTTaGAAACATGTCTCAGGGGAGTCGAGGAAGAGATTA | + |
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Preference number: 3 (lower is better) Translates to: FQRGGEQTPGGI*KHVSGESRKRL Trigger: TAATCTCTTCCTCGACTCCCCTGAGACATGTTTGCAAATCCCTCCTGGAGTTTGCTCTCCTCCTCTTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CCA 72 bp | ACTTCTGGAACACATAAGTTAGCCGCCCCCAAACACTaGATCCCCTTCTCTGATGTCAGAATGTTTAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: TSGTHKLAAPKH*IPFSDVRMFSC Trigger: ACAGCTAAACATTCTGACATCAGAGAAGGGGATCCAGTGTTTGGGGGCGGCTAACTTATGTGTTCCAGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTATGCATGGAGCTGAAGGAGTaGAGGATGAAGGTAATCATG | + |
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Preference number: 3 (lower is better) Translates to: VKIDVESGKGRVFVACVCMELKE*RMKVIM Trigger: CATGATTACCTTCATCCTCAACTCCTTCAGCTCCAT...GCATACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR TCA 72 bp | AAGATCCATCCTTCTGCTGCATCCAAAACCATATTTTaGCATCAAGGAGAGACATTACCTCAGAGTAAGGGG | + |
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Preference number: 3 (lower is better) Translates to: KIHPSAASKTIF*HQGETLPQSKG Trigger: CCCCTTACTCTGAGGTAATGTCTCTCCTTGATGTCAAAATATGGTTTTGGATGCAGCAGAAGGATGGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTATGCCCTGCCATCATTAGTTaGATGAGTAGGCATAGTATC | + |
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Preference number: 3 (lower is better) Translates to: VKIDVESGKGRVFVACVCPAIIS*MSRHSI Trigger: GATACTATGCCTACTCATCAAACTAATGATGGCAGG...GCATACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGGTTCTTTGTGATCCATTAGGCATCAGGTTAATTCAAAAAGAAGAAGTTATTGGCTCTCACACATaGAGAGATGCAGTCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: GEVLCDPLGIRLIQKEEVIGSHT*RDAVLC Trigger: ACAGAGGACTGCATCTCTCAATGTGTGAGAGCCAAT...AACTTCTTCTTTTTGAATTAACCTGATGCCTAATGGATCACAAAGAACCTCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTACCAATTAGCAATGACTaGTCATTGAACTCAGGATTA | + |
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Preference number: 3 (lower is better) Translates to: VVKIDVESGKGRVFVACVPISND*SLNSGL Trigger: TAATCCTGAGTTCAATGACAAGTCATTGCTAATTGG...TACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR TCA 72 bp | GCATGTAAAGAACCTGTGGGATATCTGGGACCTAGATaGGAGGAAACAAGATTGAAAACTAAAAATTCCACC | + |
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Preference number: 3 (lower is better) Translates to: ACKEPVGYLGPR*EETRLKTKNST Trigger: GGTGGAATTTTTAGTTTTCAATCTTGTTTCCTCTCATCTAGGTCCCAGATATCCCACAGGTTCTTTACATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGGTTCTTTGTGATCCATTAGGCATCAGGTTAATTCAAAAAGAAGAAGTTCCTGCCATCATTAGTTaGATGAGTAGGCATAGTATC | + |
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Preference number: 3 (lower is better) Translates to: GEVLCDPLGIRLIQKEEVPAIIS*MSRHSI Trigger: GATACTATGCCTACTCATCAAACTAATGATGGCAGG...AACTTCTTCTTTTTGAATTAACCTGATGCCTAATGGATCACAAAGAACCTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGGTTCTTTGTGATCCATTAGGCATCAGGTTAATTCAAAAAGAAGAAGTTGGAACAGATGTAGAGTaGAATATTTGCAGTCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: GEVLCDPLGIRLIQKEEVGTDVE*NICSLP Trigger: AGGCAGACTGCAAATATTCAACTCTACATCTGTTCC...AACTTCTTCTTTTTGAATTAACCTGATGCCTAATGGATCACAAAGAACCTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGGAGAGACATTACCTCAGAGTAAGGGGCTGTTAAAAAGATATTACAAGCAACCAATTAGCAATGACTaGTCATTGAACTCAGGATTA | + |
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Preference number: 3 (lower is better) Translates to: QGETLPQSKGLLKRYYKQPISND*SLNSGL Trigger: TAATCCTGAGTTCAATGACAAGTCATTGCTAATTGG...TTGCTTGTAATATCTTTTTAACAGCCCCTTACTCTGAGGTAATGTCTCTCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR TCA 72 bp | GATATTTTCCAGAAGAATGAGAGTCAATTTCCTTTATaGGTGTGGTTCCATCAGGCTAATCATGCATCAATA | + |
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Preference number: 3 (lower is better) Translates to: DIFQKNESQFPL*VWFHQANHASI Trigger: TATTGATGCATGATTAGCCTGATGGAACCACACTCATAAAGGAAATTGACTCTCATTCTTCTGGAAAATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 72 bp | GTTCCAAAGAGGAGGAGAGCAAACTCCAGGAGGGATTaGCAAACATGTCTCAGGGGAGTCGAGGAAGAGATT | + |
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Preference number: 4 (lower is better) Translates to: VPKRRRANSRRD*QTCLRGVEEEI Trigger: AATCTCTTCCTCGACTCCCCTGAGACATGTTTGCAAATCCCTCCTGGAGTTTGCTCTCCTCCTCTTTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CCA 90 bp | GGACATGGTGCCATGGAGCTGAAGGAGTTGAGGATGAAGGTAATCATGTTCAAACCTTGTTCTGGTCCCTaGAGTAGGTGGACTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GHGAMELKELRMKVIMFKPCSGP*SRWTLA Trigger: TGCCAAAGTCCACCTACTCCAGGGACCAGAACAAGG...TTTGAACATGATTACCTTCATCCTCAACTCCTTCAGCTCCATGGCACCATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 72 bp | CACACATTGAGAGATGCAGTCCTCTGTATACCAGTCTaGCTAACTTCTGGAACACATAAGTTAGCCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: HTLRDAVLCIPV*LTSGTHKLAAP Trigger: GGGGGCGGCTAACTTATGTGTTCCAGAAGTTAGCAAGACTGGTATACAGAGGACTGCATCTCTCAATGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR TCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGCCCAAAGAGAGCAGCTaGGCTGAGCTGAATGCCACA | + |
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Preference number: 4 (lower is better) Translates to: AIISLMSRHSIKPISNDLPKESS*AELNAT Trigger: TGTGGCATTCAGCTCAGCTCAGCTGCTCTCTTTGGG...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | GTGGTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTACAAGGTAGGAGATTGTaGTTCTCTCCGCCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VVKIDVESGKGRVFVACVQGRRL*FSPPRS Trigger: ACTTCTTGGCGGAGAGAAGCACAATCTCCTACCTTG...TACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | GTGGTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTACAGTGGGTTGCAGATTaGCATGAAGCGATCATAAGC | + |
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Preference number: 4 (lower is better) Translates to: VVKIDVESGKGRVFVACVQWVAD*HEAIIS Trigger: GCTTATGATCGCTTCATGGCAATCTGCAACCCACTG...TACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR TCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGAGAGAGCAGCTGAGCTaGGCTGAATGCCACATCCAA | + |
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Preference number: 4 (lower is better) Translates to: AIISLMSRHSIKPISNDLREQLS*AECHIQ Trigger: TTGGATGTGGCATTCAGCTCAGCTCAGCTGCTCTCT...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR TCA 90 bp | GGAGAGGTTCTTTGTGATCCATTAGGCATCAGGTTAATTCAAAAAGAAGAAGTTAGAGAGCAGCTGAGCTaGGCTGAATGCCACATCCAA | + |
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Preference number: 4 (lower is better) Translates to: GEVLCDPLGIRLIQKEEVREQLS*AECHIQ Trigger: TTGGATGTGGCATTCAGCTCAGCTCAGCTGCTCTCT...AACTTCTTCTTTTTGAATTAACCTGATGCCTAATGGATCACAAAGAACCTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | GTAAAGATAGATGTGGAGAGTGGTAAAGGGAGAGTGTTTGTAGCTTGTGTATGCAATGAACTCTGTCACTaGAGTGTGGTTCCCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: VKIDVESGKGRVFVACVCNELCH*SVVPIV Trigger: GACAATGGGAACCACACTGCAGTGACAGAGTTCATT...GCATACACAAGCTACAAACACTCTCCCTTTACCACTCTCCACATCTATCTTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CCA 90 bp | ACAGAAAACCAAAGAAGGACAGTATACAAACACACCTTCTATCACCACCACCATGGTCCCTGGAGTAGGTaGACTTTGGCATCACATAAA | + |
|
Preference number: 4 (lower is better) Translates to: TENQRRTVYKHTFYHHHHGPWSR*TLASHK Trigger: TTTATGTGATGCCAAAGTCCACCTACTCCAGGGACC...ATGGTGGTGGTGATAGAAGGTGTGTTTGTATACTGTCCTTCTTTGGTTTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGCCTTGTTCTGGTCCCTaGAGTAGGTGGACTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: AIISLMSRHSIKPISNDLPCSGP*SRWTLA Trigger: TGCCAAAGTCCACCTACTCCAGGGACCAGAACAAGG...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | TTTTCCAGAAGAATGAGAGTCAATTTCCTTTATGAGTGTGGTTCCATCAGGCTACAAGGTAGGAGATTGTaGTTCTCTCCGCCAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: FSRRMRVNFLYECGSIRLQGRRL*FSPPRS Trigger: ACTTCTTGGCGGAGAGAAGCACAATCTCCTACCTTG...TAGCCTGATGGAACCACACTCATAAAGGAAATTGACTCTCATTCTTCTGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR TCA 90 bp | CAAGGAGAGACATTACCTCAGAGTAAGGGGCTGTTAAAAAGATATTACAAGCAACAAGCATACTGGGAGTaGCAGAAGATGAAATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: QGETLPQSKGLLKRYYKQQAYWE*QKMKCL Trigger: TAGGCATTTCATCTTCTGTCACTCCCAGTATGCTTG...TTGCTTGTAATATCTTTTTAACAGCCCCTTACTCTGAGGTAATGTCTCTCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR TCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGCAAGCATACTGGGAGTaGCAGAAGATGAAATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: AIISLMSRHSIKPISNDLQAYWE*QKMKCL Trigger: TAGGCATTTCATCTTCTGTCACTCCCAGTATGCTTG...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | GCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATGACTTGAATGAACTCTGTCACTaGAGTGTGGTTCCCATTGTC | + |
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Preference number: 4 (lower is better) Translates to: AIISLMSRHSIKPISNDLNELCH*SVVPIV Trigger: GACAATGGGAACCACACTGCAGTGACAGAGTTCATT...CAAGTCATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | TTTTCCAGAAGAATGAGAGTCAATTTCCTTTATGAGTGTGGTTCCATCAGGCTAGGAATCATTAAGAAATaGACCTATATAAGATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FSRRMRVNFLYECGSIRLGIIKK*TYIRSH Trigger: GTGGGATCTTATATAGGTGCATTTCTTAATGATTCC...TAGCCTGATGGAACCACACTCATAAAGGAAATTGACTCTCATTCTTCTGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR GCA 90 bp | GGAGAGGTTCTTTGTGATCCATTAGGCATCAGGTTAATTCAAAAAGAAGAAGTTGGAATCATTAAGAAATaGACCTATATAAGATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GEVLCDPLGIRLIQKEEVGIIKK*TYIRSH Trigger: GTGGGATCTTATATAGGTGCATTTCTTAATGATTCC...AACTTCTTCTTTTTGAATTAACCTGATGCCTAATGGATCACAAAGAACCTCTCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 72 bp | AGGCATAGTATCAAACCAATTAGCAATGACTTGTCATaGAACTCAGGATTAGTTCATCTTCCAACCATTATC | + |
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Preference number: 4 (lower is better) Translates to: RHSIKPISNDLS*NSGLVHLPTII Trigger: GATAATGGTTGGAAGATGAACTAATCCTGAGTTCAATGACAAGTCATTGCTAATTGGTTTGATACTATGCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| 3UTR CAA 72 bp | GCACAGTGTTCAAACCTAGTTGAGGTTTTACTACAATaGATATTTTCCAGAAGAATGAGAGTCAATTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: AQCSNLVEVLLQ*IFSRRMRVNFL Trigger: AAGGAAATTGACTCTCATTCTTCTGGAAAATATCAATTGTAGTAAAACCTCAACTAGGTTTGAACACTGTGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGAGCATCAGAGTGCCAAATCCAAGGTAGGAGATaGTGCTTCTCTCCGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: RERERERERERERASECQIQGRR*CFSPPR Trigger: TCTTGGCGGAGAGAAGCACAATCTCCTACCTTGGAT...TTGGCACTCTGATGCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CAA 90 bp | GGACATGGTGCCATGGAGCTGAAGGAGTTGAGGATGAAGGTAATCATGTTCAAACTCTCCGCCAAGAAGTaGACAAGCATACTGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: GHGAMELKELRMKVIMFKLSAKK*TSILGV Trigger: CACTCCCAGTATGCTTGTCAACTTCTTGGCGGAGAG...TTTGAACATGATTACCTTCATCCTCAACTCCTTCAGCTCCATGGCACCATGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CAA 90 bp | ACAGAAAACCAAAGAAGGACAGTATACAAACACACCTTCTATCACCACCACCATCTCTCCGCCAAGAAGTaGACAAGCATACTGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: TENQRRTVYKHTFYHHHHLSAKK*TSILGV Trigger: CACTCCCAGTATGCTTGTCAACTTCTTGGCGGAGAG...ATGGTGGTGGTGATAGAAGGTGTGTTTGTATACTGTCCTTCTTTGGTTTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CAA 90 bp | GAACCTGCCATCATTAGTTTGATGAGTAGGCATAGTATCAAACCAATTAGCAATATCCAAGGTAGGAGATaGTGCTTCTCTCCGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: EPAIISLMSRHSIKPISNIQGRR*CFSPPR Trigger: TCTTGGCGGAGAGAAGCACAATCTCCTACCTTGGAT...ATTGCTAATTGGTTTGATACTATGCCTACTCATCAAACTAATGATGGCAGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS-3UTR CAA 90 bp | CAAGGAGAGACATTACCTCAGAGTAAGGGGCTGTTAAAAAGATATTACAAGCAATGTTTTCCTATAAAATaGCTTCTTCAGAGCACCCTT | + |
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Preference number: 5 (lower is better) Translates to: QGETLPQSKGLLKRYYKQCFPIK*LLQSTL Trigger: AAGGGTGCTCTGAAGAAGCAATTTTATAGGAAAACA...TTGCTTGTAATATCTTTTTAACAGCCCCTTACTCTGAGGTAATGTCTCTCCTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000211508.3 ENSMUST00000215173.2 |
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| CDS GCA 72 bp | AGCAAAGGAAAGGATGTAGCAGGAATCATTAAGAAATaGACCTATATAAGATCCCACAACCAACTGGATACA | + |
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Preference number: 6 (lower is better) Translates to: SKGKDVAGIIKK*TYIRSHNQLDT Trigger: TGTATCCAGTTGGTTGTGGGATCTTATATAGGTGCATTTCTTAATGATTCCTGCTACATCCTTTCCTTTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072968.2 ENSMUST00000211508.3 ENSMUST00000215173.2 |
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