Pregenerated sensors for OLFR487 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095929Ensembl transcript IDs: ENSMUST00000216489.2
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGGCCATCAGTGGGAGAATGGTCCTTGATTTTGTGAAGATTCTATaGCCTAGTATAGGGAAATGCCAATGCCAGGAAGTGGGAGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: LAISGRMVLDFVKIL*PSIGKCQCQEVGVG Trigger: ACCCACTCCCACTTCCTGGCATTGGCATTTCCCTATACTAGGGCATAGAATCTTCACAAAATCAAGGACCATTCTCCCACTGATGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR GCA 90 bp | AAGCACCAATCAAAGAAAACACATGGTGGGATTCGTGTCTCTAGTTaGATATGTAGCAGAGGATGGCCCAGTTGGCCATCAGTGGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: KHQSKKTHGGIRVSS*ICSRGWPSWPSVGE Trigger: TTCTCCCACTGATGGCCAACTGGGCCATCCTCTGCTACATATGCAACTAGAGACACGAATCCCACCATGTGTTTTCTTTGATTGGTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR TCA 90 bp | ATCCACCAAATGCAGACACTATTGCATATACCAATAAGAATTTGCTaGCAGGACCCTGATATAGTTGTCTCCTCTGAGGCTCTGCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: IHQMQTLLHIPIRIC*QDPDIVVSSEALPV Trigger: CACTGGCAGAGCCTCAGAGGAGACAACTATATCAGGGTCCTGTCAGCAAATTCTTATTGGTATATGCAATAGTGTCTGCATTTGGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR CCA 90 bp | AAACTCAAGAAGACCAAAGTGTGGGTGCTTCATTCCTTCTTTGAGTaGGGAACAAAATACCCATGGACAGAGTTACAGAGACAAAGTTCG | + |
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Preference number: 1 (lower is better) Translates to: KLKKTKVWVLHSFFE*GTKYPWTELQRQSS Trigger: CGAACTTTGTCTCTGTAACTCTGTCCATGGGTATTTTGTTCCCCACTCAAAGAAGGAATGAAGCACCCACACTTTGGTCTTCTTGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR GCA 90 bp | AATATTATGGGAGTTACCAAACTCTTATTGACTGGATCTAAGTTGTaGAAGGTCTACAAAATGATACCATACATAACACCACTATCAGGG | + |
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Preference number: 1 (lower is better) Translates to: NIMGVTKLLLTGSKL*KVYKMIPYITPLSG Trigger: CCCTGATAGTGGTGTTATGTATGGTATCATTTTGTAGACCTTGCACAACTTAGATCCAGTCAATAAGAGTTTGGTAACTCCCATAATATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR CAA 90 bp | CCTAGTATAGGGAAATGCCAATGCCAGGAAGTGGGAGTGGGTCGGTaGGAGAACAGGGGGTGGGTGGAGGGTATACAGGGTTTTAGGATA | + |
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Preference number: 2 (lower is better) Translates to: PSIGKCQCQEVGVGR*ENRGWVEGIQGFRI Trigger: TATCCTAAAACCCTGTATACCCTCCACCCACCCCCTGTTCTCCAACCGACCCACTCCCACTTCCTGGCATTGGCATTTCCCTATACTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCTGGGCATCCAATCCATAAACATCCACCAAATGCAGACACTATTGCATGGCTCTGCCAGTGCCTaGCAAATACAGAAGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: PLLGIQSINIHQMQTLLHGSASA*QIQKWM Trigger: CATCCACTTCTGTATTTGCCAGGCACTGGCAGAGCC...ATGCAATAGTGTCTGCATTTGGTGGATGTTTATGGATTGGATGCCCAGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCTGGGCATCCAATCCATAAACATCCACCAAATGCAGACACTATTGCATCATACAGAGAGGAACTaGGCACAGTGTCCAACCCTA | + |
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Preference number: 2 (lower is better) Translates to: PLLGIQSINIHQMQTLLHHTERN*AQCPTL Trigger: TAGGGTTGGACACTGTGCTCAGTTCCTCTCTGTATG...ATGCAATAGTGTCTGCATTTGGTGGATGTTTATGGATTGGATGCCCAGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCTGGGCATCCAATCCATAAACATCCACCAAATGCAGACACTATTGCATATAGGGAAATGCCAATaGCAGGAAGTGGGAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PLLGIQSINIHQMQTLLHIGKCQ*QEVGVG Trigger: ACCCACTCCCACTTCCTGGCATTGGCATTTCCCTAT...ATGCAATAGTGTCTGCATTTGGTGGATGTTTATGGATTGGATGCCCAGGAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR TCA 90 bp | CCCATGGACAGAGTTACAGAGACAAAGTTCGGAGCTGAGACTAAAGGAGTGACCTTGTCATCTATTAGATaGAACACAGTGTCCCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PMDRVTETKFGAETKGVTLSSIR*NTVSPV Trigger: CACTGGGGACACTGTGTTTCATCTAATAGATGACAA...GGTCACTCCTTTAGTCTCAGCTCCGAACTTTGTCTCTGTAACTCTGTCCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTCCTGGGCATCCAATCCATAAACATCCACCAAATGCAGACACTATTGCATATTCGTGTCTCTAGTTaGATATGTAGCAGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: PLLGIQSINIHQMQTLLHIRVSS*ICSRGW Trigger: CCATCCTCTGCTACATATGCAACTAGAGACACGAAT...ATGCAATAGTGTCTGCATTTGGTGGATGTTTATGGATTGGATGCCCAGGAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCCTTCTTTGAGTGGGGAACAAAATACCCATGGACAGAGTTACAGAGACAAAGAACAGGGGGTGGGTaGAGGGTATACAGGGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: HSFFEWGTKYPWTELQRQRTGGG*RVYRVL Trigger: TAAAACCCTGTATACCCTCCACCCACCCCCTGTTCT...TTGTCTCTGTAACTCTGTCCATGGGTATTTTGTTCCCCACTCAAAGAAGGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR GCA 90 bp | CCCATGGACAGAGTTACAGAGACAAAGTTCGGAGCTGAGACTAAAGGAGTGACCTTAGAGACTAAAAGGTaGAGTTATGAAAGGAACATG | + |
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Preference number: 2 (lower is better) Translates to: PMDRVTETKFGAETKGVTLETKR*SYERNM Trigger: CATGTTCCTTTCATAACTGCACCTTTTAGTCTCTAA...GGTCACTCCTTTAGTCTCAGCTCCGAACTTTGTCTCTGTAACTCTGTCCATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGAATGGGGCTAAAAGGCTaGGAAGAGCTGAGAATGAGG | + |
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Preference number: 2 (lower is better) Translates to: SKINNYCDRLCGDTGKAGMGLKG*EELRMR Trigger: CCTCATTCTCAGCTCTTCTCAGCCTTTTAGCCCCAT...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCCTTCTTTGAGTGGGGAACAAAATACCCATGGACAGAGTTACAGAGACAAATCTGGAAAATGAGATaGGATCACAAGTATGGAACA | + |
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Preference number: 2 (lower is better) Translates to: HSFFEWGTKYPWTELQRQIWKMR*DHKYGT Trigger: TGTTCCATACTTGTGATCCCATCTCATTTTCCAGAT...TTGTCTCTGTAACTCTGTCCATGGGTATTTTGTTCCCCACTCAAAGAAGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGATCACAAGTATGGAACATAAGCTAAAATGTGCAATAGAAAATAGGAAGGCTGGAGGTGGTGTATaGCTACAAAGAAACATTGCT | + |
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Preference number: 2 (lower is better) Translates to: DGITSMEHKLKCAIENRKAGGGV*LQRNIA Trigger: AGCAATGTTTCTTTGTAGTCATACACCACCTCCAGC...CTTCCTATTTTCTATTGCACATTTTAGCTTATGTTCCATACTTGTGATCCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGAAATACCTATACACACTaGAAGAAACAGATTAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SKINNYCDRLCGDTGKAGNTYTH*KKQIRA Trigger: TGCCCTAATCTGTTTCTTCCAGTGTGTATAGGTATT...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGATATAGGTATGACTCATaGAAGTTGTATCAGTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: SKINNYCDRLCGDTGKAGYRYDS*KLYQCL Trigger: TAGACACTGATACAACTTCCATGAGTCATACCTATA...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR CCA 72 bp | GGAAATGCCAATGCCAGGAAGTGGGAGTGGGTCGGTTaGAGAACAGGGGGTGGGTGGAGGGTATACAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: GNANARKWEWVG*RTGGGWRVYRV Trigger: AACCCTGTATACCCTCCACCCACCCCCTGTTCTCCAACCGACCCACTCCCACTTCCTGGCATTGGCATTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR TCA 72 bp | TTACAGAGACAAAGTTCGGAGCTGAGACTAAAGGAGTaGCCCTCCAGAGACTGCCCCTCCTGGGCATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: LQRQSSELRLKE*PSRDCPSWASN Trigger: ATTGGATGCCCAGGAGGGGCAGTCTCTGGAGGGTCACTCCTTTAGTCTCAGCTCCGAACTTTGTCTCTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR CCA 72 bp | GGGATTCGTGTCTCTAGTTGCATATGTAGCAGAGGATaGCCCAGTTGGCCATCAGTGGGAGAATGGTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: GIRVSSCICSRG*PSWPSVGEWSL Trigger: CAAGGACCATTCTCCCACTGATGGCCAACTGGGCCATCCTCTGCTACATATGCAACTAGAGACACGAATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR GCA 72 bp | GTGAAGATTCTATGCCCTAGTATAGGGAAATGCCAATaGCAGGAAGTGGGAGTGGGTCGGTTGGAGAACAGG | + |
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Preference number: 3 (lower is better) Translates to: VKILCPSIGKCQ*QEVGVGRLENR Trigger: CCTGTTCTCCAACCGACCCACTCCCACTTCCTGGCATTGGCATTTCCCTATACTAGGGCATAGAATCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR TCA 72 bp | ATGGTAGTATCCAGGCAGGCATGGCACAGGCACAGCTaGGAGTTCTACATCTTTATCCAAAGTCTGTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: MVVSRQAWHRHS*EFYIFIQSLLV Trigger: CACTAACAGACTTTGGATAAAGATGTAGAACTCTCAGCTGTGCCTGTGCCATGCCTGCCTGGATACTACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR GCA 72 bp | TCAAAGAAAACACATGGTGGGATTCGTGTCTCTAGTTaGATATGTAGCAGAGGATGGCCCAGTTGGCCATCA | + |
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Preference number: 3 (lower is better) Translates to: SKKTHGGIRVSS*ICSRGWPSWPS Trigger: TGATGGCCAACTGGGCCATCCTCTGCTACATATGCAACTAGAGACACGAATCCCACCATGTGTTTTCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR TCA 72 bp | GCAACTAGGGTGAGGATCTTAAGCCCACACTTACAGTaGCACACATACTCAAACCAGGTCACACCTATTCTA | + |
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Preference number: 3 (lower is better) Translates to: ATRVRILSPHLQ*HTYSNQVTPIL Trigger: TAGAATAGGTGTGACCTGGTTTGAGTATGTGTGTCACTGTAAGTGTGGGCTTAAGATCCTCACCCTAGTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCTCCTGGGCATCCAATCCATAAACATCCACCAAATGCAGACACTATTGCATTTGACTGGATCTAAGTaGTGCAAGGTCTACAAAATG | + |
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Preference number: 3 (lower is better) Translates to: PLLGIQSINIHQMQTLLHLTGSK*CKVYKM Trigger: CATTTTGTAGACCTTGCACAACTTAGATCCAGTCAA...ATGCAATAGTGTCTGCATTTGGTGGATGTTTATGGATTGGATGCCCAGGAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR GCA 72 bp | AGTGGGAGAATGGTCCTTGATTTTGTGAAGATTCTATaGCCTAGTATAGGGAAATGCCAATGCCAGGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SGRMVLDFVKIL*PSIGKCQCQEV Trigger: CACTTCCTGGCATTGGCATTTCCCTATACTAGGGCATAGAATCTTCACAAAATCAAGGACCATTCTCCCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR TCA 72 bp | ATGCAGACACTATTGCATATACCAATAAGAATTTGCTaGCAGGACCCTGATATAGTTGTCTCCTCTGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: MQTLLHIPIRIC*QDPDIVVSSEA Trigger: AGCCTCAGAGGAGACAACTATATCAGGGTCCTGTCAGCAAATTCTTATTGGTATATGCAATAGTGTCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR GCA 72 bp | GGAGTTACCAAACTCTTATTGACTGGATCTAAGTTGTaGAAGGTCTACAAAATGATACCATACATAACACCA | + |
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Preference number: 3 (lower is better) Translates to: GVTKLLLTGSKL*KVYKMIPYITP Trigger: TGGTGTTATGTATGGTATCATTTTGTAGACCTTGCACAACTTAGATCCAGTCAATAAGAGTTTGGTAACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR TCA 72 bp | GGCAAAAGGAGAAATACCAAGGCTTATAACCAAACTTaGTATGATGGTTACATTGGTCTTGCAGGATTAAAA | + |
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Preference number: 3 (lower is better) Translates to: GKRRNTKAYNQT*YDGYIGLAGLK Trigger: TTTTAATCCTGCAAGACCAATGTAACCATCATATCAAGTTTGGTTATAAGCCTTGGTATTTCTCCTTTTGCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | CCCATGGACAGAGTTACAGAGACAAAGTTCGGAGCTGAGACTAAAGGAGTGACCCTTTGTTCTGGTCCCTaGAGTAGATGGACTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PMDRVTETKFGAETKGVTLCSGP*SRWTWA Trigger: TGCCCAAGTCCATCTACTCCAGGGACCAGAACAAAG...GGTCACTCCTTTAGTCTCAGCTCCGAACTTTGTCTCTGTAACTCTGTCCATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | CCCATGGACAGAGTTACAGAGACAAAGTTCGGAGCTGAGACTAAAGGAGTGACCATCCAAGGTAGGAGATaGTGTTTTTCTCAGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PMDRVTETKFGAETKGVTIQGRR*CFSQSG Trigger: TCCTGACTGAGAAAAACACCATCTCCTACCTTGGAT...GGTCACTCCTTTAGTCTCAGCTCCGAACTTTGTCTCTGTAACTCTGTCCATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCCTGGGCATCCAATCCATAAACATCCACCAAATGCAGACACTATTGCATGGTGGAATAAAGCAGTaGGTTGCAGATTGCTACCAA | + |
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Preference number: 4 (lower is better) Translates to: PLLGIQSINIHQMQTLLHGGIKQ*VADCYQ Trigger: TTGGTAGCAATCTGCAACCCACTGCTTTATTCCACC...ATGCAATAGTGTCTGCATTTGGTGGATGTTTATGGATTGGATGCCCAGGAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| 3UTR CAA 72 bp | TCAAGAAGACCAAAGTGTGGGTGCTTCATTCCTTCTTaGAGTGGGGAACAAAATACCCATGGACAGAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: SRRPKCGCFIPS*SGEQNTHGQSY Trigger: GTAACTCTGTCCATGGGTATTTTGTTCCCCACTCAAAGAAGGAATGAAGCACCCACACTTTGGTCTTCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | CATTCCTTCTTTGAGTGGGGAACAAAATACCCATGGACAGAGTTACAGAGACAAGGATACACACTTGTGTaGACATTTTGGTGGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: HSFFEWGTKYPWTELQRQGYTLV*TFWWNK Trigger: TTTATTCCACCAAAATGTCCACACAAGTGTGTATCC...TTGTCTCTGTAACTCTGTCCATGGGTATTTTGTTCCCCACTCAAAGAAGGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGAGTGTGGACATTTTGGTaGAATAAAGCAGTGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SKINNYCDRLCGDTGKAGVWTFW*NKAVGC Trigger: GCAACCCACTGCTTTATTCCACCAAAATGTCCACAC...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGAGTACCTACAACCAACTaGATACACACTTGTGTGGAC | + |
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Preference number: 4 (lower is better) Translates to: SKINNYCDRLCGDTGKAGVPTTN*IHTCVD Trigger: GTCCACACAAGTGTGTATCCAGTTGGTTGTAGGTAC...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGACTTGTGTGGACATTTTaGTGGAATAAAGCAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SKINNYCDRLCGDTGKAGLVWTF*WNKAVG Trigger: ACCCACTGCTTTATTCCACCAAAATGTCCACACAAG...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGAGTGATTGACCCTATTTaGGCCACAGAAGAGAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SKINNYCDRLCGDTGKAGVIDPI*ATEEKR Trigger: TCTTTTCTCTTCTGTGGCCCAAATAGGGTCAATCAC...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR TCA 90 bp | TCCAAGATTAACAATTATTGTGATAGACTATGTGGAGATACTGGAAAAGCTGGATTAGTCCCAATAATATaGACTCTGTCACTGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SKINNYCDRLCGDTGKAGLVPII*TLSLLS Trigger: AGACAACAGTGACAGAGTTCATATTATTGGGACTAA...TCCAGCTTTTCCAGTATCTCCACATAGTCTATCACAATAATTGTTAATCTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CAA 90 bp | GATGGGATCACAAGTATGGAACATAAGCTAAAATGTGCAATAGAAAATAGGAAGTTCTCAGTCAGGAAGTaGACAAGCATATTGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: DGITSMEHKLKCAIENRKFSVRK*TSILGV Trigger: CACACCCAATATGCTTGTCAACTTCCTGACTGAGAA...CTTCCTATTTTCTATTGCACATTTTAGCTTATGTTCCATACTTGTGATCCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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| CDS-3UTR CAA 90 bp | GATGGGATCACAAGTATGGAACATAAGCTAAAATGTGCAATAGAAAATAGGAAGCAACTGGATACACACTaGTGTGGACATTTTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: DGITSMEHKLKCAIENRKQLDTH*CGHFGG Trigger: TCCACCAAAATGTCCACACAAGTGTGTATCCAGTTG...CTTCCTATTTTCTATTGCACATTTTAGCTTATGTTCCATACTTGTGATCCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216489.2 |
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