Pregenerated sensors for OLFR484 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000110171Ensembl transcript IDs: ENSMUST00000210881.2, ENSMUST00000214722.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGATGGATTCCCTTGATGGAACAGTGGATTCCCTTGGTGGAAAGATaGCCTTTCCTTCAGTCTCTGCTCCCCTCTCTGTCACTTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GWIPLMEQWIPLVER*PFLQSLLPSLSLPF Trigger: GAAAGGAAGTGACAGAGAGGGGAGCAGAGACTGAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAATCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 90 bp | TGGGTATGTGGCTCCATCCCTCAACTGGGGTCCTTGCCTATCCACTaGATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTATTT | + |
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Preference number: 1 (lower is better) Translates to: WVCGSIPQLGSLPIH*IWSLLVLSPLCWVF Trigger: AAATACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATTCAGTGGATAGGCAAGGACCCCAGTTGAGGGATGGAGCCACATACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CCA 90 bp | CAGATTTGGTGTCTGCAGATGGGATGGATTCCCTTGATGGAACAGTaGATTCCCTTGGTGGAAAGATGGCCTTTCCTTCAGTCTCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: QIWCLQMGWIPLMEQ*IPLVERWPFLQSLL Trigger: GAGCAGAGACTGAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAATCCATCCCATCTGCAGACACCAAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 90 bp | TCAGGAATTTGCCTGCTTTTGTATCTGCCTGCCTTTGTATCTTTCTaGGAATCTGGCTCACAGGGTAACTGCCTCTGTTCCTTCAGATCT | + |
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Preference number: 1 (lower is better) Translates to: SGICLLLYLPAFVSF*ESGSQGNCLCSFRS Trigger: AGATCTGAAGGAACAGAGGCAGTTACCCTGTGAGCCAGATTCTCAGAAAGATACAAAGGCAGGCAGATACAAAAGCAGGCAAATTCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 90 bp | AGTTGTTCTTATGTGGTTGTAAACCATTTCAACTCCTTCAGTTACTaGCTAACTTCTCCACTGGGGTCCCTGCACTCAGTCCAATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: SCSYVVVNHFNSFSY*LTSPLGSLHSVQCL Trigger: TAAACATTGGACTGAGTGCAGGGACCCCAGTGGAGAAGTTAGGCAGTAACTGAAGGAGTTGAAATGGTTTACAACCACATAAGAACAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CCA 90 bp | CACAACTTGTATGAATTGGTTCCTTCTTTCCACCATATAGGTTCATaGGATCAAAGCCCAATTATCAGGCATGGTGGTATTGACTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: HNLYELVPSFHHIGS*DQSPIIRHGGIDFS Trigger: GGAAAAGTCAATACCACCATGCCTGATAATTGGGCTTTGATCCCATGAACCTATATGGTGGAAAGAAGGAACCAATTCATACAAGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 90 bp | TGTCTGCAGATGGGATGGATTCCCTTGATGGAACAGTGGATTCCCTaGGTGGAAAGATGGCCTTTCCTTCAGTCTCTGCTCCCCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: CLQMGWIPLMEQWIP*VERWPFLQSLLPSL Trigger: CAGAGAGGGGAGCAGAGACTGAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAATCCATCCCATCTGCAGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR TCA 90 bp | CATCTGGAGCCACTAGGGTGCCCTGCTGTGTACTCTTCCGTTGGTAGTTTAGGGCAGGCATGGTGGTATTaGCTTTTCCCACTAAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: HLEPLGCPAVYSSVGSLGQAWWY*LFPLSF Trigger: GAAGCTTAGTGGGAAAAGTCAATACCACCATGCCTG...CCCTAAACTACCAACGGAAGAGTACACAGCAGGGCACCCTAGTGGCTCCAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 90 bp | AGCCACAAGGGTTGTCCTGTTCTGAAGGGTCCAGGGCTTACCATTTaGCTAAGACATTGGCCACAGTTTTGCCTCCTGGATTCATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SHKGCPVLKGPGLTI*LRHWPQFCLLDSCC Trigger: ACAGCATGAATCCAGGAGGCAAAACTGTGGCCAATGTCTTAGCAAAATGGTAAGCCCTGGACCCTTCAGAACAGGACAACCCTTGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CATCTGGAGCCACTAGGGTGCCCTGCTGTGTACTCTTCCGTTGGTAGTTTAGGGGCCTGCTTTTGTATCTaGCTGCCTTTGTATCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: HLEPLGCPAVYSSVGSLGACFCI*LPLYLS Trigger: AGAAAGATACAAAGGCAGGCAGATACAAAAGCAGGC...CCCTAAACTACCAACGGAAGAGTACACAGCAGGGCACCCTAGTGGCTCCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CATTCACATAGACTGGGTCATCTAGCCTGGAGGGGCTCCCCTCCCATTGATGCCTTGAACTCAGGAATTTaGCTGCTTTTGTATCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: HSHRLGHLAWRGSPPIDALNSGI*LLLYLP Trigger: AGGCAGATACAAAAGCAGGCAAATTCCTGAGTTCAA...GGCATCAATGGGAGGGGAGCCCCTCCAGGCTAGATGACCCAGTCTATGTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTGGAGCCACTAGGGTGCCCTGCTGTGTACTCTTCCGTTGGTAGTTTAGGGATTTTGCTAAGACATTaGCCACAGTTTTGCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HLEPLGCPAVYSSVGSLGILLRH*PQFCLL Trigger: CAGGAGGCAAAACTGTGGCCAATGTCTTAGCAAAAT...CCCTAAACTACCAACGGAAGAGTACACAGCAGGGCACCCTAGTGGCTCCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGAGTGGATTCCCTTGGTaGAAAGATGGCCTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWSGFPW*KDGLSF Trigger: GAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACT...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGTGTCTGCAGATGGGATaGATTCCCTTGATGGAACAG | + |
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Preference number: 2 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWCLQMG*IPLMEQ Trigger: CTGTTCCATCAAGGGAATCCATCCCATCTGCAGACA...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGGGGGAGGGGAGTGGTTaGTATTGTAGTTGTTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWGEGSG*YCSCSY Trigger: ATAAGAACAACTACAATATCAACCACTCCCCTCCCC...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 90 bp | ATTTCTACCACACCTGGGCCTGGACACTTTCTGTTCCAGCTGACCTaGAACTCAGGAATTTGCCTGCTTTTGTATCTGCCTGCCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: ISTTPGPGHFLFQLT*NSGICLLLYLPAFV Trigger: TACAAAGGCAGGCAGATACAAAAGCAGGCAAATTCCTGAGTTCAAGGTCAGCTGGAACAGAAAGTGTCCAGGCCCAGGTGTGGTAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGCCTATCCACTGAATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTTGCTGGGTGGGACCCTaGCCTGAAATTAACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: LAYPLNMVSTGSLSPLLGCWVGP*PEINIS Trigger: AGAAATGTTAATTTCAGGGCAGGGTCCCACCCAGCA...ACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATTCAGTGGATAGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGCCTATCCACTGAATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTAATACAGATGCTGGGTaGGACCCTGCCCTGAAATTA | + |
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Preference number: 2 (lower is better) Translates to: LAYPLNMVSTGSLSPLLGNTDAG*DPALKL Trigger: TAATTTCAGGGCAGGGTCCCACCCAGCATCTGTATT...ACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATTCAGTGGATAGGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGGAATATGGTCTCTACTaGTTCTCTCTCCCCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWEYGLY*FSLPFV Trigger: AACAAAGGGGAGAGAGAACCAGTAGAGACCATATTC...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 90 bp | TGGGCCTGGACACTTTCTGTTCCAGCTGACCTTGAACTCAGGAATTaGCCTGCTTTTGTATCTGCCTGCCTTTGTATCTTTCTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: WAWTLSVPADLELRN*PAFVSACLCIFLRI Trigger: GATTCTCAGAAAGATACAAAGGCAGGCAGATACAAAAGCAGGCAAATTCCTGAGTTCAAGGTCAGCTGGAACAGAAAGTGTCCAGGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR TCA 90 bp | AATTCAGATACCTGCCTGCCTCTGTTAAATACAGATGCTGGGTGGGACCCTGCCAGAGTAAGAAGAAGGTaGATAACAAAACCTCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: NSDTCLPLLNTDAGWDPARVRRR*ITKPQR Trigger: CCTCTGAGGTTTTGTTATTCACCTTCTTCTTACTCT...GGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | AATTCAGATACCTGCCTGCCTCTGTTAAATACAGATGCTGGGTGGGACCCTGCCGCTTTTGTATCTGCCTaGCTTTGTATCTTTCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: NSDTCLPLLNTDAGWDPAAFVSA*LCIFLR Trigger: TCTCAGAAAGATACAAAGGCAGGCAGATACAAAAGC...GGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTGGAGCCACTAGGGTGCCCTGCTGTGTACTCTTCCGTTGGTAGTTTAGGGTTTTTAATGATGATGTaGTCTCTGGTAGAACAACCA | + |
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Preference number: 2 (lower is better) Translates to: HLEPLGCPAVYSSVGSLGFLMMM*SLVEQP Trigger: TGGTTGTTCTACCAGAGACCACATCATCATTAAAAA...CCCTAAACTACCAACGGAAGAGTACACAGCAGGGCACCCTAGTGGCTCCAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTTGGCATCAGTAATAGTGTCAACTCAGGAATTTGCCTaGTTTTGTATCTGCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QLYQAPVSKHFLASVIVSTQEFA*FCICLP Trigger: AGGCAGGCAGATACAAAAGCAGGCAAATTCCTGAGT...TGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGATGAATCAGCACCTTTaGTTCTTAAGATACAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWMNQHL*FLRYRK Trigger: CTTCCTGTATCTTAAGAAGCAAAGGTGCTGATTCAT...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCTATCCACTGAATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTAAGTTCACAGGTAGCTaGGGAAATTTTTGCAACCAA | + |
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Preference number: 2 (lower is better) Translates to: LAYPLNMVSTGSLSPLLGKFTGS*GNFCNQ Trigger: TTGGTTGCAAAAATTTCCTCAGCTACCTGTGAACTT...ACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATTCAGTGGATAGGCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCTATCCACTGAATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTCTTGTGATTATCCTATaGATCAGCACCTTTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LAYPLNMVSTGSLSPLLGLVIIL*ISTFAS Trigger: AGAAGCAAAGGTGCTGATTCATAGGATAATCACAAG...ACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATTCAGTGGATAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGGTATTACTGAACCAATaGGATGCTAAAGATCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWVLLNQ*DAKDLL Trigger: TAACAGATCTTTAGCATCGCATTGGTTCAGTAATAC...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTAACTGCCTCTGTTCCTTCAGATCTTTGAAGCTCCTTATACGATTCATAATAACCCAAGTCCCCTaGAAGAGTAGTCTGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGNCLCSFRSLKLLIRFIITQVP*KSSLCS Trigger: AGAGCACAGACTACTCTTGCAGGGGACTTGGGTTAT...TATGAATCGTATAAGGAGCTTCAAAGATCTGAAGGAACAGAGGCAGTTACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCAGATACCTGCCTGCCTCTGTTAAATACAGATGCTGGGTGGGACCCTGCCACAACTTGTATGAATTaGTTCCTTCTTTCCACCATA | + |
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Preference number: 2 (lower is better) Translates to: NSDTCLPLLNTDAGWDPATTCMN*FLLSTI Trigger: TATGGTGGAAAGAAGGAACCAATTCATACAAGTTGT...GGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCTTGATGGAACAGTGGATTCCCTTGGTGGAAAGATGGCCTTTCCTTCAGCTTACTCATAGTCTTTaGTACTTGACAAACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: IPLMEQWIPLVERWPFLQLTHSL*YLTNIP Trigger: TGGGATGTTTGTCAAGTACCAAAGACTATGAGTAAG...CTGAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTTGGCATCAGTAATAGTGTCATTACTAGTGCTAGAGTaGCACAGGTATTATAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: QLYQAPVSKHFLASVIVSLLVLE*HRYYRN Trigger: ATTCCTATAATACCTGTGTCACTCTAGCACTAGTAA...TGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 90 bp | CTTTCTTCTCACCTCTCACGACAGCTTACTCATAGTCTTTGGTACTaGACAAACATCCCAAAATATTTGGGAAAATTTAAGCTGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: LSSHLSRQLTHSLWY*TNIPKYLGKFKLNL Trigger: CAGGTTCAGCTTAAATTTTCCCAAATATTTTGGGATGTTTGTCAAGTACCAAAGACTATGAGTAAGCTGTCGTGAGAGGTGAGAAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTAACTGCCTCTGTTCCTTCAGATCTTTGAAGCTCCTTATACGATTCATAAGTCACACCAAAATATaGAAAAAGGAAATGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: QGNCLCSFRSLKLLIRFISHTKI*KKEMQQ Trigger: CTGTTGCATTTCCTTTTTGCATATTTTGGTGTGACT...TATGAATCGTATAAGGAGCTTCAAAGATCTGAAGGAACAGAGGCAGTTACCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCACTAAGCTTCTACTTCTTAAAATCATCAACACTCATGTTAGGACCTTTCAAAGAAAGAAGAGTTaGGTATGTAGCAGAGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: FPTKLLLLKIINTHVRTFQRKKS*VCSRES Trigger: ACTCTCTCTGCTACATACCCAACTCTTCTTTCTTTG...AAAGGTCCTAACATGAGTGTTGATGATTTTAAGAAGTAGAAGCTTAGTGGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | CCCCTCCACAAATGCCCTATTCCCTCCCCCTCTCCCTaGCTAAGAGGGTGCTCTCCTACCCACCCATCCATT | + |
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Preference number: 3 (lower is better) Translates to: PLHKCPIPSPSP*LRGCSPTHPSI Trigger: AATGGATGGGTGGGTAGGAGAGCACCCTCTTAGGCAGGGAGAGGGGGAGGGAATAGGGCATTTGTGGAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | ATCCCATCACTCAGGAGGCAGAGGCAGGCAGATTTCTaGGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPSLRRQRQADF*VQGQPGLQSEF Trigger: GAACTCACTCTGTAGACCAGGCTGACCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGATGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | GGCTCCATCCCTCAACTGGGGTCCTTGCCTATCCACTaGATATGGTCTCTACTGGTTCTCTCTCCCCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: GSIPQLGSLPIH*IWSLLVLSPLC Trigger: ACAAAGGGGAGAGAGAACCAGTAGAGACCATATTCAGTGGATAGGCAAGGACCCCAGTTGAGGGATGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | ACTGGGTCATCTAGCCTGGAGGGGCTCCCCTCCCATTaGTGCCAGATAAAGCAATCCTCTGCTACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: TGSSSLEGLPSH*CQIKQSSATYA Trigger: TGCATATGTAGCAGAGGATTGCTTTATCTGGCATCAATGGGAGGGGAGCCCCTCCAGGCTAGATGACCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | CCTGCCTCTGTTAAATACAGATGCTGGGTGGGACCCTaGCCTGAAATTAACATTTCTACCACACCTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PASVKYRCWVGP*PEINISTTPGP Trigger: AGGCCCAGGTGTGGTAGAAATGTTAATTTCAGGGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | GTCAGATTTGGTGTCTGCAGATGGGATGGATTCCCTTaGTGGAACAGTGGATTCCCTTGGTGGAAAGATGGC | + |
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Preference number: 3 (lower is better) Translates to: VRFGVCRWDGFP*WNSGFPWWKDG Trigger: GCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAATCCATCCCATCTGCAGACACCAAATCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CAA 90 bp | AATTCAGATACCTGCCTGCCTCTGTTAAATACAGATGCTGGGTGGGACCCTGCCCTTGAACTCAGGAATTaGCCTGCTTTTGTATCTGCC | + |
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Preference number: 3 (lower is better) Translates to: NSDTCLPLLNTDAGWDPALELRN*PAFVSA Trigger: GGCAGATACAAAAGCAGGCAAATTCCTGAGTTCAAG...GGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGGTAATAGTGTCAGATTaGGTGTCTGCAGATGGGATG | + |
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Preference number: 3 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWVIVSD*VSADGM Trigger: CATCCCATCTGCAGACACCAAATCTGACACTATTAC...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CCA 72 bp | CTGAAGGGTCCAGGGCTTACCATTTTGCTAAGACATTaGCCACAGTTTTGCCTCCTGGATTCATGCTGTTTC | + |
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Preference number: 3 (lower is better) Translates to: LKGPGLTILLRH*PQFCLLDSCCF Trigger: GAAACAGCATGAATCCAGGAGGCAAAACTGTGGCCAATGTCTTAGCAAAATGGTAAGCCCTGGACCCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CCA 72 bp | GATACCTGCCTGCCTCTGTTAAATACAGATGCTGGGTaGGACCCTGCCCTGAAATTAACATTTCTACCACAC | + |
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Preference number: 3 (lower is better) Translates to: DTCLPLLNTDAG*DPALKLTFLPH Trigger: GTGTGGTAGAAATGTTAATTTCAGGGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CAA 90 bp | AATTCAGATACCTGCCTGCCTCTGTTAAATACAGATGCTGGGTGGGACCCTGCCCACAACTTGTATGAATaGGTTCCTTCTTTCCACCAT | + |
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Preference number: 3 (lower is better) Translates to: NSDTCLPLLNTDAGWDPAHNLYE*VPSFHH Trigger: ATGGTGGAAAGAAGGAACCAATTCATACAAGTTGTG...GGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCTACCCACCCATCCATTTCTGACTCAGGGCTCTAGCATTCACATAGACTGGTGTTCCTTCAGATCTTaGAAGCTCCTTATACGATTC | + |
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Preference number: 3 (lower is better) Translates to: LLPTHPFLTQGSSIHIDWCSFRS*KLLIRF Trigger: GAATCGTATAAGGAGCTTCAAAGATCTGAAGGAACA...CCAGTCTATGTGAATGCTAGAGCCCTGAGTCAGAAATGGATGGGTGGGTAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | TATGTGGTTGTAAACCATTTCAACTCCTTCAGTTACTaGCTAACTTCTCCACTGGGGTCCCTGCACTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: YVVVNHFNSFSY*LTSPLGSLHSV Trigger: GACTGAGTGCAGGGACCCCAGTGGAGAAGTTAGGCAGTAACTGAAGGAGTTGAAATGGTTTACAACCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CCA 72 bp | TTCAGATACCTGCCTGCCTCTGTTAAATACAGATGCTaGGTGGGACCCTGCCCTGAAATTAACATTTCTACC | + |
|
Preference number: 3 (lower is better) Translates to: FRYLPASVKYRC*VGPCPEINIST Trigger: GGTAGAAATGTTAATTTCAGGGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTTGGCATCAGTAATAGTGTCAGGAATTTGCCTGCTTTaGTATCTGCCTGCCTTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QLYQAPVSKHFLASVIVSGICLL*YLPAFV Trigger: TACAAAGGCAGGCAGATACAAAAGCAGGCAAATTCC...TGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | GAATTCAGATACCTGCCTGCCTCTGTTAAATACAGATaGTGGGTGGGACCCTGCCCTGAAATTAACATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EFRYLPASVKYR*WVGPCPEINIS Trigger: AGAAATGTTAATTTCAGGGCAGGGTCCCACCCAGCATCTGTATTTAACAGAGGCAGGCAGGTATCTGAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | GTGTGTGTGTGTGTGTGCCTAAGAGCACAACTTGTATaGATTGGTTCCTTCTTTCCACCATATAGGTTCATG | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCLRAQLV*IGSFFPPYRFM Trigger: CATGAACCTATATGGTGGAAAGAAGGAACCAATTCATACAAGTTGTGCTCTTAGGCACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTTGGCATCAGTAATAGTGTCATTTAGATTAATATTTTaGAGGTGGGTATGTGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLYQAPVSKHFLASVIVSFRLIF*RWVCGS Trigger: GGAGCCACATACCCACCTCAAAAATATTAATCTAAA...TGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | TGGAGAGAGAACAAGGGCATGAAGTTCACAGGTAGCTaGGGAAATTTTTGCAACCAATATCTTCTAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: WRENKGMKFTGS*GNFCNQYLLRE Trigger: TTCCCTTAGAAGATATTGGTTGCAAAAATTTCCTCAGCTACCTGTGAACTTCATGCCCTTGTTCTCTCTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | TCACACCAAAATATGCAAAAAGGAAATGCAACAGATTaGGATAGCTACGAATACTGGGAGTACAGGGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: SHQNMQKGNATD*DSYEYWEYRER Trigger: TCTCTCCCTGTACTCCCAGTATTCGTAGCTATCGCAATCTGTTGCATTTCCTTTTTGCATATTTTGGTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | CTTTTTGTGTGTATGAGTGTTTTGCGTTTAAGGATGTaGATCATATGCATGCCAGGTCACTTTAGAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LFVCMSVLRLRM*IICMPGHFRRQ Trigger: CTGCCTTCTAAAGTGACCTGGCATGCATATGATGCACATCCTTAAACGCAAAACACTCATACACACAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | TGTATGAGTGTTTTGCGTTTAAGGATGTGCATCATATaGATGCCAGGTCACTTTAGAAGGCAGAAACTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: CMSVLRLRMCII*MPGHFRRQKLY Trigger: GTAAAGTTTCTGCCTTCTAAAGTGACCTGGCATGCATATGATGCACATCCTTAAACGCAAAACACTCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | CACCATCCAGGAAAGACATGCTTACTAGTGCTAGAGTaGCACAGGTATTATAGGAATAAACAACTTACTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HHPGKTCLLVLE*HRYYRNKQLTY Trigger: GTAAGTAAGTTGTTTATTCCTATAATACCTGTGTCACTCTAGCACTAGTAAGCATGTCTTTCCTGGATGGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR TCA 72 bp | CAGGTACAAGCTATCAAAAACCAACAGTGTCTTCTATaGTCACAAATTCTTTCTGGAATAGTATGTCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: QVQAIKNQQCLL*SQILSGIVCQN Trigger: GTTCTGACATACTATTCCAGAAAGAATTTGTGATCATAGAAGACACTGTTGGTTTTTGATAGCTTGTACCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR GCA 72 bp | ACTTTTCCTTGTGATTATCCTATGAATCAGCACCTTTaGTTCTTAAGATACAGGAAGGCTGCATTTACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: TFPCDYPMNQHL*FLRYRKAAFTF Trigger: AAAAGTAAATGCAGCCTTCCTGTATCTTAAGAAGCAAAGGTGCTGATTCATAGGATAATCACAAGGAAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | CATTCACATAGACTGGGTCATCTAGCCTGGAGGGGCTCCCCTCCCATTGATGCCTGTGGACATTTTAGTTaGATAGAGCAGTGGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSHRLGHLAWRGSPPIDACGHFS*IEQWVA Trigger: TGCAACCCACTGCTCTATTCAACTAAAATGTCCACA...GGCATCAATGGGAGGGGAGCCCCTCCAGGCTAGATGACCCAGTCTATGTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | ATGGGATGGATTCCCTTGATGGAACAGTGGATTCCCTaGGTGGAAAGATGGCCTTTCCTTCAGTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGWIPLMEQWIP*VERWPFLQSLL Trigger: GAGCAGAGACTGAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAATCCATCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | ATTCCCTTGATGGAACAGTGGATTCCCTTGGTGGAAAGATGGCCTTTCCTTCAGGGGTGTGACAGAAGATaGGTAGCCTATGTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPLMEQWIPLVERWPFLQGCDRR*VAYVSR Trigger: TCTGCTGACATAGGCTACTCATCTTCTGTCACACCC...CTGAAGGAAAGGCCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | TGTCAGATTTGGTGTCTGCAGATGGGATGGATTCCCTaGATGGAACAGTGGATTCCCTTGGTGGAAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CQIWCLQMGWIP*MEQWIPLVERW Trigger: CCATCTTTCCACCAAGGGAATCCACTGTTCCATCAAGGGAATCCATCCCATCTGCAGACACCAAATCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | TCTGAAGGGTCCAGGGCTTACCATTTTGCTAAGACATaGGCCACAGTTTTGCCTCCTGGATTCATGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SEGSRAYHFAKT*ATVLPPGFMLF Trigger: AAACAGCATGAATCCAGGAGGCAAAACTGTGGCCAATGTCTTAGCAAAATGGTAAGCCCTGGACCCTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | GGACAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTaGGCATCAGTAATAGTGTCAGATTTGGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLYQAPVSKHF*ASVIVSDLVSA Trigger: TGCAGACACCAAATCTGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AGTAAGAAGAAGGTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTGGGTGTGACAGAAGATaGGTAGCCTATGTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKKKVNNKTSEDSPTVLSGCDRR*VAYVSR Trigger: TCTGCTGACATAGGCTACTCATCTTCTGTCACACCC...ACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCACCTTCTTCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTAAGAAGAAGGTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGCAAGCATATTGGGTGTaGCAGAAGATGAGTAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSKKKVNNKTSEDSPTVLQAYWV*QKMSSL Trigger: TAGGCTACTCATCTTCTGTCACACCCAATATGCTTG...CAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCACCTTCTTCTTACTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | AGGGCTTACCATTTTGCTAAGACATTGGCCACAGTTTaGCCTCCTGGATTCATGCTGTTTCTGACAATCATG | + |
|
Preference number: 4 (lower is better) Translates to: RAYHFAKTLATV*PPGFMLFLTIM Trigger: CATGATTGTCAGAAACAGCATGAATCCAGGAGGCAAAACTGTGGCCAATGTCTTAGCAAAATGGTAAGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTAAGAAGAAGGTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGTGTGGACATTTTAGTTaGATAGAGCAGTGGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKKKVNNKTSEDSPTVLCGHFS*IEQWVA Trigger: TGCAACCCACTGCTCTATTCAACTAAAATGTCCACA...CAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCACCTTCTTCTTACTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTATTTTGGCTAATGTTCAAGCATATTGGGTGTaGCAGAAGATGAGTAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: NMVSTGSLSPLLGILANVQAYWV*QKMSSL Trigger: TAGGCTACTCATCTTCTGTCACACCCAATATGCTTG...AACATTAGCCAAAATACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATGTCTGTGGAGTATCTTaGCTTGGGCATCACGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVNNKTSEDSPTVLSNCHVCGVS*LGHHVN Trigger: ATTTACGTGATGCCCAAGTCAAGATACTCCACAGAC...ATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | GGCTCACAGGGTAACTGCCTCTGTTCCTTCAGATCTTaGAAGCTCCTTATACGATTCATATTGCATTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSQGNCLCSFRS*KLLIRFILHSY Trigger: ATAAGAATGCAATATGAATCGTATAAGGAGCTTCAAAGATCTGAAGGAACAGAGGCAGTTACCCTGTGAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AAGGTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATTGTGCCAGCAGAAAATaGGGTAACAAGTACAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVNNKTSEDSPTVLSNCHCASRK*GNKYRD Trigger: ATCTCTGTACTTGTTACCTCATTTTCTGCTGGCACA...ATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AATATGGTCTCTACTGGTTCTCTCTCCCCTTTGTTGGGTATTTTGGCTAATGTTTGTGCCAGCAGAAAATaGGGTAACAAGTACAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NMVSTGSLSPLLGILANVCASRK*GNKYRD Trigger: ATCTCTGTACTTGTTACCTCATTTTCTGCTGGCACA...AACATTAGCCAAAATACCCAACAAAGGGGAGAGAGAACCAGTAGAGACCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | GTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATTATGTCTGTGGAGTATCTTaGCTTGGGCATCACGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VNNKTSEDSPTVLSNCHYVCGVS*LGHHVN Trigger: ATTTACGTGATGCCCAAGTCAAGATACTCCACAGAC...ATAATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR CCA 90 bp | CAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTTGGCATCAGTAATAGTGTCAATCCAATGTAGGAGATaGTATTTTGCTTTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLYQAPVSKHFLASVIVSIQCRR*YFALQG Trigger: TCCTTGTAAAGCAAAATACCATCTCCTACATTGGAT...TGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR CCA 90 bp | CAGCTATACCAGGCTCCTGTCAGTAAGCACTTCTTGGCATCAGTAATAGTGTCAGTGATTGATTATGTTTaGTCCACAGAAGAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QLYQAPVSKHFLASVIVSVIDYV*STEEQE Trigger: TTCTTGTTCTTCTGTGGACCAAACATAATCAATCAC...TGACACTATTACTGATGCCAAGAAGTGCTTACTGACAGGAGCCTGGTATAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATTATTATATTCAAGTACAGAGATCCTaGCATCAGAACAGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTSEDSPTVLSNCHYYIQVQRS*HQNRRA Trigger: AGCTCTCCTGTTCTGATGTCAGGATCTCTGTACTTG...AATATAATAATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | TTTCCCACTAAGCTTCTACTTCTTAAAATCATCAACACTCATGTTAGGACCTTTCAAGTACAGAGATCCTaGCATCAGAACAGGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPTKLLLLKIINTHVRTFQVQRS*HQNRRA Trigger: AGCTCTCCTGTTCTGATGTCAGGATCTCTGTACTTG...AAAGGTCCTAACATGAGTGTTGATGATTTTAAGAAGTAGAAGCTTAGTGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| 3UTR CAA 72 bp | CATGGGATCAAAGCCCAATTATCAGGCATGGTGGTATaGACTTTTCCCACTAAGCTTCTACTTCTTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: HGIKAQLSGMVV*TFPTKLLLLKI Trigger: GATTTTAAGAAGTAGAAGCTTAGTGGGAAAAGTCAATACCACCATGCCTGATAATTGGGCTTTGATCCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR CCA 90 bp | AGTAAGAAGAAGGTGAATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTATCCAATGTAGGAGATaGTATTTTGCTTTACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKKKVNNKTSEDSPTVLSIQCRR*YFALQG Trigger: TCCTTGTAAAGCAAAATACCATCTCCTACATTGGAT...ACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATTCACCTTCTTCTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR TCA 90 bp | AACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATTATTATATTTCCAAAGAAAGCAGCTaGGCCAAATTGTATAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NKTSEDSPTVLSNCHYYISKESS*AKLYRT Trigger: TGTTCTATACAATTTGGCTCAGCTGCTTTCTTTGGA...AATATAATAATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR CCA 90 bp | AATAACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATTATTATGTGATTGATTATGTTTaGTCCACAGAAGAACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: NNKTSEDSPTVLSNCHYYVIDYV*STEEQE Trigger: TTCTTGTTCTTCTGTGGACCAAACATAATCAATCAC...ATAATAATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTTATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS-3UTR CAA 90 bp | GAAGGCAGAAACTTTACTGAATTCCTTAAACCTGTAATTTTAGATGGCTGTGAGTGCTTTACAAGGAAGTaGACAAGCATATTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGRNFTEFLKPVILDGCECFTRK*TSILGV Trigger: CACACCCAATATGCTTGTCAACTTCCTTGTAAAGCA...CTCACAGCCATCTAAAATTACAGGTTTAAGGAATTCAGTAAAGTTTCTGCCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214722.2 |
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| CDS-3UTR CAA 90 bp | AACAAAACCTCAGAGGACAGTCCCACTGTCTTGAGTAATTGTCATTATTATATTTGCTTTACAAGGAAGTaGACAAGCATATTGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKTSEDSPTVLSNCHYYICFTRK*TSILGV Trigger: CACACCCAATATGCTTGTCAACTTCCTTGTAAAGCA...AATATAATAATGACAATTACTCAAGACAGTGGGACTGTCCTCTGAGGTTTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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| CDS TCA 72 bp | CAGAAGGAAGCATTCAAGTCCTCCAAAGAAAGCAGCTaGGCCAAATTGTATAGAACATCCAATGTAGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QKEAFKSSKESS*AKLYRTSNVGD Trigger: ATCTCCTACATTGGATGTTCTATACAATTTGGCTCAGCTGCTTTCTTTGGAGGACTTGAATGCTTCCTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000210881.2 ENSMUST00000214722.2 |
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