RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR481 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054236

Ensembl transcript IDs: ENSMUST00000067143.7, ENSMUST00000213601.2

Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCCAAACTCTCTGCTTCCTGCCTTACCACATTGTGATAAGTCATaGGACACCCCACGGGCCATGCTTTCCCACCATGATAGAACTATG +
Preference number: 1 (lower is better)
Translates to: APNSLLPALPHCDKS*DTPRAMLSHHDRTM
Trigger: CATAGTTCTATCATGGTGGGAAAGCATGGCCCGTGGGGTGTCTCATGACTTATCACAATGTGGTAAGGCAGGAAGCAGAGAGTTTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 90 bp GAGACAGGAGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAAAGTaGGTTACAGGACAGCCAGAGCTATACAGAGAAACCCTGTCTCAA +
Preference number: 1 (lower is better)
Translates to: ETGGFLSSRTAWSTK*VTGQPELYRETLSQ
Trigger: TTGAGACAGGGTTTCTCTGTATAGCTCTGGCTGTCCTGTAACTCACTTTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCTCCTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 90 bp TTCCTGAAGGGCCAAGTGGAAGTAAAGATGAGGATAGCCAGAGAATaGAAATCTTCAGGCAGCAGAGTTCGGACTCCCACCATAACATTG +
Preference number: 1 (lower is better)
Translates to: FLKGQVEVKMRIARE*KSSGSRVRTPTITL
Trigger: CAATGTTATGGTGGGAGTCCGAACTCTGCTGCCTGAAGATTTTCATTCTCTGGCTATCCTCATCTTTACTTCCACTTGGCCCTTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 90 bp CATGAGACACCCCACGGGCCATGCTTTCCCACCATGATAGAACTATaGAACAAAAGATGTCTTTCCTCCCTTAAGTTGTTTCTGTCTGGT +
Preference number: 1 (lower is better)
Translates to: HETPHGPCFPTMIEL*NKRCLSSLKLFLSG
Trigger: ACCAGACAGAAACAACTTAAGGGAGGAAAGACATCTTTTGTTTCATAGTTCTATCATGGTGGGAAAGCATGGCCCGTGGGGTGTCTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR GCA 90 bp CAGAACCATAAACAGAGAAATCTGCTACCAGCAGACAAGGACATCTaGTCAGTCTACCTAATGAAGGATCCAAGAACGAGAGGTCAGCTT +
Preference number: 1 (lower is better)
Translates to: QNHKQRNLLPADKDI*SVYLMKDPRTRGQL
Trigger: AAGCTGACCTCTCGTTCTTGGATCCTTCATTAGGTAGACTGAGCAGATGTCCTTGTCTGCTGGTAGCAGATTTCTCTGTTTATGGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR GCA 90 bp ATTACCTTTTCTCTTGGGAGCATGCACACCTTCAGCACTCTCAGCTaGTTTGGGCCCTATAGTAAGATAATGGGTAAAGTCATAGTTTTG +
Preference number: 1 (lower is better)
Translates to: ITFSLGSMHTFSTLS*FGPYSKIMGKVIVL
Trigger: CAAAACTATGACTTTACCCATTATCTTACTATAGGGCCCAAAGCAGCTGAGAGTGCTGAAGGTGTGCATGCTCCCAAGAGAAAAGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CCA 90 bp GATGTCTTAAGCAATATAGATGCATGTCTTGCAGTTCTGGAGGCTTaGAGTCCAAGATCAAGCATCATTAGGGTGTTTCCTCTCATAGTT +
Preference number: 1 (lower is better)
Translates to: DVLSNIDACLAVLEA*SPRSSIIRVFPLIV
Trigger: AACTATGAGAGGAAACACCCTAATGATGCTTGATCTTGGACTCCAAGCCTCCAGAACTGCAAGACATGCATCTATATTGCTTAAGACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 90 bp AGGACTATATCAATGAGAGTTCTACCCACACACTTTACACCTGGATaGATTAAGCCTGAATTCTTTAGCATTGAAACACATGAGACATAC +
Preference number: 1 (lower is better)
Translates to: RTISMRVLPTHFTPG*IKPEFFSIETHETY
Trigger: GTATGTCTCATGTGTTTCAATGCTAAAGAATTCAGGCTTAATTCATCCAGGTGTAAAGTGTGTGGGTAGAACTCTCATTGATATAGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 90 bp TATAGTAAGATAATGGGTAAAGTCATAGTTTTGAGGAAAAAGACCTaGATATCTGCCCTGTGGTACAAGGTAAGGATCTCAGGGTATAAA +
Preference number: 1 (lower is better)
Translates to: YSKIMGKVIVLRKKT*ISALWYKVRISGYK
Trigger: TTTATACCCTGAGATCCTTACCTTGTACCACAGGGCAGATATTCAGGTCTTTTTCCTCAAAACTATGACTTTACCCATTATCTTACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CCA 90 bp ACTCAGGAGGCAGAGACAGGAGGATTTCTGAGTTCGAGGACAGCCTGGTCTACAGAAAAACAGGTATGTTaGAGAAGCTGTGGGTTGCTT +
Preference number: 2 (lower is better)
Translates to: TQEAETGGFLSSRTAWSTEKQVC*RSCGLL
Trigger: AAGCAACCCACAGCTTCTCCAACATACCTGTTTTTC...TGTAGACCAGGCTGTCCTCGAACTCAGAAATCCTCCTGTCTCTGCCTCCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp TCATTACCTTTTCTCTTGGGAGCATGCACACCTTCAGCACTCTCAGCTGCTTTGGCCAATTCAATAAGGTaGACTGGATTTGAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: SLPFLLGACTPSALSAALANSIR*TGFESL
Trigger: AAGACTCTCAAATCCAGTGCACCTTATTGAATTGGC...CAAAGCAGCTGAGAGTGCTGAAGGTGTGCATGCTCCCAAGAGAAAAGGTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp TTCAGAACCATAAACAGAGAAATCTGCTACCAGCAGACAAGGACATCTGCTCAGGTTAAAGGGAGAGATTaGCACACAGATACTGATCAT +
Preference number: 2 (lower is better)
Translates to: FRTINREICYQQTRTSAQVKGRD*HTDTDH
Trigger: ATGATCAGTATCTGTGTGGCAATCTCTCCCTTTAAC...CTGAGCAGATGTCCTTGTCTGCTGGTAGCAGATTTCTCTGTTTATGGTTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCAACACCCCACGGGCCATaGTTTCCCACCATGATAGAA +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDATPHGP*FPTMIE
Trigger: TTCTATCATGGTGGGAAAGCATGGCCCGTGGGGTGT...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp GGGGTCTGCCCTAAAAGTATTGCATTGGTGAAAGCATGTGTCCATTATGAGACATTAAGAGGATTATGCTaGTATTTCCCACTACAGTCA +
Preference number: 2 (lower is better)
Translates to: GVCPKSIALVKACVHYETLRGLC*YFPLQS
Trigger: TGACTGTAGTGGGAAATATCAGCATAATCCTCTTAA...TGTCTCATAATGGACACATGCTTTCACCAATGCAATACTTTTAGGGCAGACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp TTCAGAACCATAAACAGAGAAATCTGCTACCAGCAGACAAGGACATCTGCTCAGCAGCCAGTGAGATTATaGATCAGAGAATATAATCAG +
Preference number: 2 (lower is better)
Translates to: FRTINREICYQQTRTSAQQPVRL*IREYNQ
Trigger: CTGATTATATTCTCTGATTCATAATCTCACTGGCTG...CTGAGCAGATGTCCTTGTCTGCTGGTAGCAGATTTCTCTGTTTATGGTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp GGGGTCTGCCCTAAAAGTATTGCATTGGTGAAAGCATGTGTCCATTATGAGACAGAAATAAGCAGCCAGTaGGATTATGAATCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: GVCPKSIALVKACVHYETEISSQ*DYESEN
Trigger: ATTCTCTGATTCATAATCTCACTGGCTGCTTATTTC...TGTCTCATAATGGACACATGCTTTCACCAATGCAATACTTTTAGGGCAGACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp GGGGTCTGCCCTAAAAGTATTGCATTGGTGAAAGCATGTGTCCATTATGAGACACGAGAGGTCAGCTTATaGAATGTGTTTTTCATAATC +
Preference number: 2 (lower is better)
Translates to: GVCPKSIALVKACVHYETREVSL*NVFFII
Trigger: GATTATGAAAAACACATTTCATAAGCTGACCTCTCG...TGTCTCATAATGGACACATGCTTTCACCAATGCAATACTTTTAGGGCAGACCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp GTAAAGTCACATTCAATGACCCTGGGAATTAGAAGTCTTCCGTGTATATTTTATATCTTTTCCCCGGGATaGAGTCAAACCCTGGAGTAC +
Preference number: 2 (lower is better)
Translates to: VKSHSMTLGIRSLPCIFYIFSPG*SQTLEY
Trigger: GTACTCCAGGGTTTGACTTCATCCCGGGGAAAAGAT...ATAAAATATACACGGAAGACTTCTAATTCCCAGGGTCATTGAATGTGACTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp GCTAGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGTGCCCCAAACTCTCTaGTTCCTGCCTTACCACATT +
Preference number: 2 (lower is better)
Translates to: ASTTIAKCHKLDVLSNIDVPQTL*FLPYHI
Trigger: AATGTGGTAAGGCAGGAAGCAGAGAGTTTGGGGCAC...ATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 90 bp CAGTTGCATTTGCTTGCTAGCACTACTATAGCCAAATGTCATAAGTaGGATGTCTTAAGCAATATAGATGCATGTCTTGCAGTTCTGGAG +
Preference number: 2 (lower is better)
Translates to: QLHLLASTTIAKCHK*DVLSNIDACLAVLE
Trigger: CTCCAGAACTGCAAGACATGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGCAAGCAAATGCAACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp GCTAGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATATTAGGTCCTACTTGTaGCCCAAACTCTCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: ASTTIAKCHKLDVLSNIDIRSYL*PKLSAS
Trigger: GGAAGCAGAGAGTTTGGGGCACAAGTAGGACCTAAT...ATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp GCACATAGCAGCAGCATCCAGATCTGTGTCATCTTTTTAATAGTGTTTTGCTTTCAAAAGTTAGATGGCTaGAAAACAGGTATGTTGGAG +
Preference number: 2 (lower is better)
Translates to: AHSSSIQICVIFLIVFCFQKLDG*KTGMLE
Trigger: CTCCAACATACCTGTTTTTCAGCCATCTAACTTTTG...AAAGCAAAACACTATTAAAAAGATGACACAGATCTGGATGCTGCTGCTATGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCAAGGATAGCCAGAGAATaGAAATCTTCAGGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDARIARE*KSSGSR
Trigger: TCTGCTGCCTGAAGATTTTCATTCTCTGGCTATCCT...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCAGCAGACAAGGACATCTaGTCAGTCTACCTAATGAAG +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDAADKDI*SVYLMK
Trigger: CTTCATTAGGTAGACTGAGCAGATGTCCTTGTCTGC...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp CTGGATGAATTAAGCCTGAATTCTTTAGCATTGAAACACATGAGACATACCTCTATAAACAGAGAAATCTaGTACCAGCAGACAAGGACA +
Preference number: 2 (lower is better)
Translates to: LDELSLNSLALKHMRHTSINREI*YQQTRT
Trigger: TGTCCTTGTCTGCTGGTAGCAGATTTCTCTGTTTAT...AGAGGTATGTCTCATGTGTTTCAATGCTAAAGAATTCAGGCTTAATTCATCCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 90 bp TACCAGATAGTGAAACTTAAGAGCAAACTATATATGCAGTTGCATTaGCTTGCTAGCACTACTATAGCCAAATGTCATAAGTTGGATGTC +
Preference number: 2 (lower is better)
Translates to: YQIVKLKSKLYMQLH*LASTTIAKCHKLDV
Trigger: GACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGCAAGCAAATGCAACTGCATATATAGTTTGCTCTTAAGTTTCACTATCTGGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCAAGCATGTGTCCATTATaGGACAAGCAGAGAAATGTA +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDASMCPL*DKQRNV
Trigger: TACATTTCTCTGCTTGTCTCATAATGGACACATGCT...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp GTAAAGTCACATTCAATGACCCTGGGAATTAGAAGTCTTCCGTGTATATTTTATAAGGTGCACTGGATTTaGGAGTCTTGGAGAAAAATT +
Preference number: 2 (lower is better)
Translates to: VKSHSMTLGIRSLPCIFYKVHWI*ESWRKI
Trigger: AATTTTTCTCCAAGACTCTCAAATCCAGTGCACCTT...ATAAAATATACACGGAAGACTTCTAATTCCCAGGGTCATTGAATGTGACTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR TCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCATCTCAGATTTATGTTTaGATACTTACCCTCTGGTTC +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDASQIYV*ILTLWF
Trigger: GAACCAGAGGGTAAGTATTCAAACATAAATCTGAGA...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCACCCACAAAAGTTAGATaGCTGAAAAACAGGTATGTT +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDAPTKVR*LKNRYV
Trigger: AACATACCTGTTTTTCAGCCATCTAACTTTTGTGGG...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR GCA 90 bp GCTAGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATATTATTATCCTCCAGTaGAAAGTCTATACCCAATTC +
Preference number: 2 (lower is better)
Translates to: ASTTIAKCHKLDVLSNIDIIILQ*KVYTQF
Trigger: GAATTGGGTATAGACTTTGCACTGGAGGATAATAAT...ATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CCA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCAGAGAATATAATCAGGTaGGCTATTTTTCTCCTAAGA +
Preference number: 2 (lower is better)
Translates to: STTIAKCHKLDVLSNIDAENIIR*AIFLLR
Trigger: TCTTAGGAGAAAAATAGCCCACCTGATTATATTCTC...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 72 bp TCTCTGCTTCCTGCCTTACCACATTGTGATAAGTCATaGGACACCCCACGGGCCATGCTTTCCCACCATGAT +
Preference number: 3 (lower is better)
Translates to: SLLPALPHCDKS*DTPRAMLSHHD
Trigger: ATCATGGTGGGAAAGCATGGCCCGTGGGGTGTCTCATGACTTATCACAATGTGGTAAGGCAGGAAGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR GCA 72 bp TCTCTTGGGAGCATGCACACCTTCAGCACTCTCAGCTaGTTTGGGCCCTATAGTAAGATAATGGGTAAAGTC +
Preference number: 3 (lower is better)
Translates to: SLGSMHTFSTLS*FGPYSKIMGKV
Trigger: GACTTTACCCATTATCTTACTATAGGGCCCAAAGCAGCTGAGAGTGCTGAAGGTGTGCATGCTCCCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CCA 72 bp TTCAAACTGTACCCTAGTCTTCATTACCTTTTCTCTTaGGAGCATGCACACCTTCAGCACTCTCAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: FKLYPSLHYLFS*EHAHLQHSQLL
Trigger: AAGCAGCTGAGAGTGCTGAAGGTGTGCATGCTCCCAAGAGAAAAGGTAATGAAGACTAGGGTACAGTTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 72 bp TCTGTGCAGGGGTCTGCCCTAAAAGTATTGCATTGGTaGAAGCATGTGTCCATTATGAGACAAGCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: SVQGSALKVLHW*KHVSIMRQAEK
Trigger: TTTCTCTGCTTGTCTCATAATGGACACATGCTTTCACCAATGCAATACTTTTAGGGCAGACCCCTGCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CCA 72 bp TTTGAATACTTACCCTCTGGTTCGTGGGATTGTATCTaGGGAAAAGACTATGGAATAAGCCTCAGGTCTGTG +
Preference number: 3 (lower is better)
Translates to: FEYLPSGSWDCI*GKDYGISLRSV
Trigger: CACAGACCTGAGGCTTATTCCATAGTCTTTTCCCCAGATACAATCCCACGAACCAGAGGGTAAGTATTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CCA 72 bp AGCAATATAGATGCATGTCTTGCAGTTCTGGAGGCTTaGAGTCCAAGATCAAGCATCATTAGGGTGTTTCCT +
Preference number: 3 (lower is better)
Translates to: SNIDACLAVLEA*SPRSSIIRVFP
Trigger: AGGAAACACCCTAATGATGCTTGATCTTGGACTCCAAGCCTCCAGAACTGCAAGACATGCATCTATATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CAA 90 bp TGTACCCTAGTCTTCATTACCTTTTCTCTTGGGAGCATGCACACCTTCAGCACTTGGAGAAGCTGTGGGTaGCTTATAATTAAGAGGATT +
Preference number: 3 (lower is better)
Translates to: CTLVFITFSLGSMHTFSTWRSCG*LIIKRI
Trigger: AATCCTCTTAATTATAAGCAACCCACAGCTTCTCCA...AGTGCTGAAGGTGTGCATGCTCCCAAGAGAAAAGGTAATGAAGACTAGGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CAA 90 bp AGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATGCAAGCCCCCACAAACCTTaGGCAGTCTCCAGCACCAAA +
Preference number: 3 (lower is better)
Translates to: STTIAKCHKLDVLSNIDASPHKP*AVSSTK
Trigger: TTTGGTGCTGGAGACTGCCAAAGGTTTGTGGGGGCT...TGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 72 bp ATGTGGAATAGACAATGCCCACAAAAGTTAGATGGCTaGAAAACAGGTATGTTGGAGAAGCTGTGGGTTGCT +
Preference number: 3 (lower is better)
Translates to: MWNRQCPQKLDG*KTGMLEKLWVA
Trigger: AGCAACCCACAGCTTCTCCAACATACCTGTTTTTCAGCCATCTAACTTTTGTGGGCATTGTCTATTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 72 bp ATGACCCATCTCCTCCCATGTTCTCAGATTTATGTTTaGATACTTACCCTCTGGTTCGTGGGATTGTATCTG +
Preference number: 3 (lower is better)
Translates to: MTHLLPCSQIYV*ILTLWFVGLYL
Trigger: CAGATACAATCCCACGAACCAGAGGGTAAGTATTCAAACATAAATCTGAGAACATGGGAGGAGATGGGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CCA 72 bp CCCTGTCTTATAACTAGGAATCTTACAAATAATAAGTaGAGACTACACACACACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: PCLITRNLTNNK*RLHTHTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTCTCCACTTATTATTTGTAAGATTCCTAGTTATAAGACAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 72 bp ATAATGGGTAAAGTCATAGTTTTGAGGAAAAAGACCTaGATATCTGCCCTGTGGTACAAGGTAAGGATCTCA +
Preference number: 3 (lower is better)
Translates to: IMGKVIVLRKKT*ISALWYKVRIS
Trigger: TGAGATCCTTACCTTGTACCACAGGGCAGATATTCAGGTCTTTTTCCTCAAAACTATGACTTTACCCATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CCA 72 bp ATTTGTCTCACATTTAAGGCTATTTTTGACATTCATTaGCACATAGCAGCAGCATCCAGATCTGTGTCATCT +
Preference number: 3 (lower is better)
Translates to: ICLTFKAIFDIH*HIAAASRSVSS
Trigger: AGATGACACAGATCTGGATGCTGCTGCTATGTGCCAATGAATGTCAAAAATAGCCTTAAATGTGAGACAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CAA 90 bp CTGGATGAATTAAGCCTGAATTCTTTAGCATTGAAACACATGAGACATACCTCTCCTAAAAGTATTGCATaGGTGAAAGCATGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: LDELSLNSLALKHMRHTSPKSIA*VKACVH
Trigger: ATGGACACATGCTTTCACCAATGCAATACTTTTAGG...AGAGGTATGTCTCATGTGTTTCAATGCTAAAGAATTCAGGCTTAATTCATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CAA 90 bp GTAAAGTCACATTCAATGACCCTGGGAATTAGAAGTCTTCCGTGTATATTTTATCTTTCCTCCCTTAAGTaGTTTCTGTCTGGTACAATG +
Preference number: 3 (lower is better)
Translates to: VKSHSMTLGIRSLPCIFYLSSLK*FLSGTM
Trigger: CATTGTACCAGACAGAAACAACTTAAGGGAGGAAAG...ATAAAATATACACGGAAGACTTCTAATTCCCAGGGTCATTGAATGTGACTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR-3UTR CAA 90 bp GCACATAGCAGCAGCATCCAGATCTGTGTCATCTTTTTAATAGTGTTTTGCTTTCTGAATTCTTTAGCATaGAAACACATGAGACATACC +
Preference number: 3 (lower is better)
Translates to: AHSSSIQICVIFLIVFCFLNSLA*KHMRHT
Trigger: GGTATGTCTCATGTGTTTCAATGCTAAAGAATTCAG...AAAGCAAAACACTATTAAAAAGATGACACAGATCTGGATGCTGCTGCTATGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR TCA 72 bp AAGAGATATAGCCAATTCAATAAGGTGCACTGGATTTaGGAGTCTTGGAGAAAAATTTGTCTGTCCTCTAAG +
Preference number: 3 (lower is better)
Translates to: KRYSQFNKVHWI*ESWRKICLSSK
Trigger: CTTAGAGGACAGACAAATTTTTCTCCAAGACTCTCAAATCCAGTGCACCTTATTGAATTGGCTATATCTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR GCA 72 bp AGTAAGGTTAAAATGAGGGGAAACCAACAGCCCTCTTaGACAAAGCTTTACTCAAATGATCATATACACAAA +
Preference number: 3 (lower is better)
Translates to: SKVKMRGNQQPS*TKLYSNDHIHK
Trigger: TTTGTGTATATGATCATTTGAGTAAAGCTTTGTGCAAGAGGGCTGTTGGTTTCCCCTCATTTTAACCTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR GCA 72 bp AATCAGAAATCAGTTAGAAGAGTTAAAGGGAGAGATTaGCACACAGATACTGATCATGAATTGTGTAAGCAT +
Preference number: 3 (lower is better)
Translates to: NQKSVRRVKGRD*HTDTDHELCKH
Trigger: ATGCTTACACAATTCATGATCAGTATCTGTGTGGCAATCTCTCCCTTTAACTCTTCTAACTGATTTCTGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR GCA 90 bp TGTACCCTAGTCTTCATTACCTTTTCTCTTGGGAGCATGCACACCTTCAGCACTAGAGCCAAGCTGGGCTaGACAGCCAGCGAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: CTLVFITFSLGSMHTFSTRAKLG*TASERD
Trigger: ATCCCTCTCGCTGGCTGTGCAGCCCAGCTTGGCTCT...AGTGCTGAAGGTGTGCATGCTCCCAAGAGAAAAGGTAATGAAGACTAGGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR CCA 90 bp GGGGTCTGCCCTAAAAGTATTGCATTGGTGAAAGCATGTGTCCATTATGAGACAACATCAGAGCCAAGCTaGGCTGCACAGCCAGCGAGA +
Preference number: 4 (lower is better)
Translates to: GVCPKSIALVKACVHYETTSEPS*AAQPAR
Trigger: TCTCGCTGGCTGTGCAGCCCAGCTTGGCTCTGATGT...TGTCTCATAATGGACACATGCTTTCACCAATGCAATACTTTTAGGGCAGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR TCA 90 bp TGTACCCTAGTCTTCATTACCTTTTCTCTTGGGAGCATGCACACCTTCAGCACTCATTATAGGTGTGACTaGTGTGGAGTAGCCAATGTC +
Preference number: 4 (lower is better)
Translates to: CTLVFITFSLGSMHTFSTHYRCD*CGVANV
Trigger: GACATTGGCTACTCCACATCAGTCACACCTATAATG...AGTGCTGAAGGTGTGCATGCTCCCAAGAGAAAAGGTAATGAAGACTAGGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 72 bp GTTGTAGTAGAGTGTTTACCTAGCCCCCACAAACCTTaGGCAGTCTCCAGCACCAAAACAAACCAAACCAAA +
Preference number: 4 (lower is better)
Translates to: VVVECLPSPHKP*AVSSTKTNQTK
Trigger: TTTGGTTTGGTTTGTTTTGGTGCTGGAGACTGCCAAAGGTTTGTGGGGGCTAGGTAAACACTCTACTACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 72 bp CATGACCCATCTCCTCCCATGTTCTCAGATTTATGTTaGAATACTTACCCTCTGGTTCGTGGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: HDPSPPMFSDLC*NTYPLVRGIVS
Trigger: AGATACAATCCCACGAACCAGAGGGTAAGTATTCAAACATAAATCTGAGAACATGGGAGGAGATGGGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR GCA 90 bp GTAAAGTCACATTCAATGACCCTGGGAATTAGAAGTCTTCCGTGTATATTTTATCAGGAAGCAGCAGATTaGTGGGGACATTTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: VKSHSMTLGIRSLPCIFYQEAAD*WGHLSG
Trigger: TCCACTCAAATGTCCCCAGCAATCTGCTGCTTCCTG...ATAAAATATACACGGAAGACTTCTAATTCCCAGGGTCATTGAATGTGACTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR CCA 90 bp AGTGCAAAGTCTATACCCAATTCCACTCTAATACCTATGTATGGAGATATCAGTGAAGCAGCAGATTGCTaGGGACATTTGAGTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SAKSIPNSTLIPMYGDISEAADC*GHLSGV
Trigger: TACTCCACTCAAATGTCCCCAGCAATCTGCTGCTTC...ACTGATATCTCCATACATAGGTATTAGAGTGGAATTGGGTATAGACTTTGCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR CCA 90 bp TTCAGAACCATAAACAGAGAAATCTGCTACCAGCAGACAAGGACATCTGCTCAGGGCAGAAGAGATGGATaGAGATATTTCAGCAATATA +
Preference number: 4 (lower is better)
Translates to: FRTINREICYQQTRTSAQGRRDG*RYFSNI
Trigger: TATATTGCTGAAATATCTCCATCCATCTCTTCTGCC...CTGAGCAGATGTCCTTGTCTGCTGGTAGCAGATTTCTCTGTTTATGGTTCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS-3UTR GCA 90 bp GCTAGCACTACTATAGCCAAATGTCATAAGTTGGATGTCTTAAGCAATATAGATTGTGAAGCTGTGGGCTaGTCCGAATTAGGAGGATTA +
Preference number: 4 (lower is better)
Translates to: ASTTIAKCHKLDVLSNIDCEAVG*SELGGL
Trigger: TAATCCTCCTAATTCGGAGCAGCCCACAGCTTCACA...ATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 72 bp TTGCTTGCTAGCACTACTATAGCCAAATGTCATAAGTaGGATGTCTTAAGCAATATAGATGCATGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLASTTIAKCHK*DVLSNIDACLA
Trigger: TGCAAGACATGCATCTATATTGCTTAAGACATCCAACTTATGACATTTGGCTATAGTAGTGCTAGCAAGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 72 bp GTGAAACTTAAGAGCAAACTATATATGCAGTTGCATTaGCTTGCTAGCACTACTATAGCCAAATGTCATAAG +
Preference number: 4 (lower is better)
Translates to: VKLKSKLYMQLH*LASTTIAKCHK
Trigger: CTTATGACATTTGGCTATAGTAGTGCTAGCAAGCAAATGCAACTGCATATATAGTTTGCTCTTAAGTTTCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
3UTR CAA 72 bp CAGATAGTGAAACTTAAGAGCAAACTATATATGCAGTaGCATTTGCTTGCTAGCACTACTATAGCCAAATGT +
Preference number: 4 (lower is better)
Translates to: QIVKLKSKLYMQ*HLLASTTIAKC
Trigger: ACATTTGGCTATAGTAGTGCTAGCAAGCAAATGCAACTGCATATATAGTTTGCTCTTAAGTTTCACTATCTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS CCA 90 bp GATCGTAGAGAGCGTGCTCACAAGGACGGAGGCAGAAGAGATGGATaGAGATATTTCAGCAATATAAGCATGGCCACAAGACAGTTTCAC +
Preference number: 5 (lower is better)
Translates to: DRRERAHKDGGRRDG*RYFSNISMATRQFH
Trigger: GTGAAACTGTCTTGTGGCCATGCTTATATTGCTGAAATATCTCCATCCATCTCTTCTGCCTCCGTCCTTGTGAGCACGCTCTCTACGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000067143.7
ENSMUST00000213601.2
CDS-3UTR CAA 90 bp GTAAAGTCACATTCAATGACCCTGGGAATTAGAAGTCTTCCGTGTATATTTTATAAATGGTTGACTTTGTaGGGGCCACAGAAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: VKSHSMTLGIRSLPCIFYKWLTL*GPQKFR
Trigger: CCTAAACTTCTGTGGCCCCAACAAAGTCAACCATTT...ATAAAATATACACGGAAGACTTCTAATTCCCAGGGTCATTGAATGTGACTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213601.2
CDS CCA 72 bp CACTCGGTAGTTCCAAAAGCTACATCAGAGCCAAGCTaGGCTGCACAGCCAGCGAGAGGGATAGTAGTTTCT +
Preference number: 6 (lower is better)
Translates to: HSVVPKATSEPS*AAQPARGIVVS
Trigger: AGAAACTACTATCCCTCTCGCTGGCTGTGCAGCCCAGCTTGGCTCTGATGTAGCTTTTGGAACTACCGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000067143.7
ENSMUST00000213601.2
CDS GCA 72 bp GGTAGTTCCAAAAGCTACATCAGAGCCAAGCTGGGCTaGACAGCCAGCGAGAGGGATAGTAGTTTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: GSSKSYIRAKLG*TASERDSSFFS
Trigger: AGAGAAGAAACTACTATCCCTCTCGCTGGCTGTGCAGCCCAGCTTGGCTCTGATGTAGCTTTTGGAACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000067143.7
ENSMUST00000213601.2
CDS TCA 72 bp GAAGCTGTGGGCTGCTCCGAATTAGGAGGATTATACTaGTATTTCCCACTACAGTCACTATATAAACCGGTA +
Preference number: 6 (lower is better)
Translates to: EAVGCSELGGLY*YFPLQSLYKPV
Trigger: TACCGGTTTATATAGTGACTGTAGTGGGAAATATCAGTATAATCCTCCTAATTCGGAGCAGCCCACAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000067143.7
ENSMUST00000213601.2