Pregenerated sensors for OLFR480 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063120Ensembl transcript IDs: ENSMUST00000071658.3, ENSMUST00000217653.3
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACATGGTAGGAGTCCCAGCTCCAGGGGATATGGCACACTCTTCTaGCCTCCATGGGCACCAAGCAAGCACATGGTATACAGGTATACA | + |
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Preference number: 1 (lower is better) Translates to: LHGRSPSSRGYGTLF*PPWAPSKHMVYRYT Trigger: TGTATACCTGTATACCATGTGCTTGCTTGGTGCCCATGGAGGTCAGAAGAGTGTGCCATATCCCCTGGAGCTGGGACTCCTACCATGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR TCA 90 bp | TATCTTCCAATTTGGCTGGGTTATAGTTCACTAGCAGAAGAGCCATaGAAGAATCCTGTTGGGAAGAGCATCCTTCCAACACCAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: YLPIWLGYSSLAEEP*KNPVGKSILPTPVP Trigger: TGGGACTGGTGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTGCTAGTGAACTATAACCCAGCCAAATTGGAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR CCA 90 bp | GATATGGCACACTCTTCTGACCTCCATGGGCACCAAGCAAGCACATaGTATACAGGTATACATGTAGACAAAATACTCATGCACATAAAA | + |
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Preference number: 1 (lower is better) Translates to: DMAHSSDLHGHQAST*YTGIHVDKILMHIK Trigger: TTTTATGTGCATGAGTATTTTGTCTACATGTATACCTGTATACCATGTGCTTGCTTGGTGCCCATGGAGGTCAGAAGAGTGTGCCATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGGGATATGGCACACTCTTCTGACCTCCATGGGCACCAAGCAAGCACATAGACTGACATTATGGTaGATGCCAATGCTATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LQGIWHTLLTSMGTKQAHRLTLW*MPMLSS Trigger: TGAGGATAGCATTGGCATCCACCATAATGTCAGTCT...ATGTGCTTGCTTGGTGCCCATGGAGGTCAGAAGAGTGTGCCATATCCCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGGGATATGGCACACTCTTCTGACCTCCATGGGCACCAAGCAAGCACATATGAAAGAATCCTGTTaGGAAGAGCATCCTTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: LQGIWHTLLTSMGTKQAHMKESC*EEHPSN Trigger: GTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCAT...ATGTGCTTGCTTGGTGCCCATGGAGGTCAGAAGAGTGTGCCATATCCCCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGAGCCATGAAAGAATCCTGTTGGGAAGAGCATCCTTCCAACACCAGTCCTATGGTGGATGCCAATaGTATCCTCATTCAGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: QKSHERILLGRASFQHQSYGGCQ*YPHSEG Trigger: ACCCTCTGAATGAGGATAGCATTGGCATCCACCATA...GGACTGGTGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR TCA 72 bp | AGGAGTCCCAGCTCCAGGGGATATGGCACACTCTTCTaGCCTCCATGGGCACCAAGCAAGCACATGGTATAC | + |
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Preference number: 3 (lower is better) Translates to: RSPSSRGYGTLF*PPWAPSKHMVY Trigger: GTATACCATGTGCTTGCTTGGTGCCCATGGAGGTCAGAAGAGTGTGCCATATCCCCTGGAGCTGGGACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCAGGGGATATGGCACACTCTTCTGACCTCCATGGGCACCAAGCAAGCACATCATGAAAGAATCCTGTaGGGAAGAGCATCCTTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LQGIWHTLLTSMGTKQAHHERIL*GRASFQ Trigger: TTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATG...ATGTGCTTGCTTGGTGCCCATGGAGGTCAGAAGAGTGTGCCATATCCCCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| 3UTR TCA 72 bp | ATTTGGCTGGGTTATAGTTCACTAGCAGAAGAGCCATaGAAGAATCCTGTTGGGAAGAGCATCCTTCCAACA | + |
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Preference number: 3 (lower is better) Translates to: IWLGYSSLAEEP*KNPVGKSILPT Trigger: TGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTGCTAGTGAACTATAACCCAGCCAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR TCA 90 bp | CAGAAGAGCCATGAAAGAATCCTGTTGGGAAGAGCATCCTTCCAACACCAGTCCACCACAATACAGAGTTaGGCCACACAGCCAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: QKSHERILLGRASFQHQSTTIQS*ATQPAT Trigger: TGTGGCTGGCTGTGTGGCTCAACTCTGTATTGTGGT...GGACTGGTGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR TCA 90 bp | CAGAAGAGCCATGAAAGAATCCTGTTGGGAAGAGCATCCTTCCAACACCAGTCCGCTGAGGGCTGGTTCTaGTTAGCACAATTATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QKSHERILLGRASFQHQSAEGWF*LAQLCS Trigger: TGAACATAATTGTGCTAATCAGAACCAGCCCTCAGC...GGACTGGTGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR GCA 90 bp | GTTGCTCTTCCAGAAGACCAGGGTTTGATTCCTAGTTCCTACATGGTAGGAGTCTTCCAACTAGGAGGATaGAGACTGTGGAGGACATCT | + |
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Preference number: 4 (lower is better) Translates to: VALPEDQGLIPSSYMVGVFQLGG*RLWRTS Trigger: AGATGTCCTCCACAGTCTGCATCCTCCTAGTTGGAA...GACTCCTACCATGTAGGAACTAGGAATCAAACCCTGGTCTTCTGGAAGAGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR CCA 90 bp | GTAGAGCAGGAGGCTGTTTTTCAGACTGACATTATGGTGGATGCCAATGCTATCGGAGGATGCAGACTGTaGAGGACATCTGTGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VEQEAVFQTDIMVDANAIGGCRL*RTSVLS Trigger: ACTCAACACAGATGTCCTCCACAGTCTGCATCCTCC...GATAGCATTGGCATCCACCATAATGTCAGTCTGAAAAACAGCCTCCTGCTCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGCCATGAAAGAATCCTGTTGGGAAGAGCATCCTTCCAACACCAGTCCTTCAGATGTCCCAAATaGCACCACAATACAGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QKSHERILLGRASFQHQSFRCPK*HHNTEL Trigger: CAACTCTGTATTGTGGTGGCATTTGGGACATCTGAA...GGACTGGTGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGAGCCATGAAAGAATCCTGTTGGGAAGAGCATCCTTCCAACACCAGTGGATCCCGAAGAGATTaGTGGAATGACTTCAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: SRRAMKESCWEEHPSNTSGSRRD*WNDFKR Trigger: TCTTTTGAAGTCATTCCAGCAATCTCTTCGGGATCC...ACTGGTGTTGGAAGGATGCTCTTCCCAACAGGATTCTTTCATGGCTCTTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR CCA 90 bp | GTAGAGCAGGAGGCTGTTTTTCAGACTGACATTATGGTGGATGCCAATGCTATCTCCCGAAGAGATTGCTaGAATGACTTCAAAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: VEQEAVFQTDIMVDANAISRRDC*NDFKRK Trigger: TTTTCTTTTGAAGTCATTCCAGCAATCTCTTCGGGA...GATAGCATTGGCATCCACCATAATGTCAGTCTGAAAAACAGCCTCCTGCTCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR CAA 90 bp | GTTGCTCTTCCAGAAGACCAGGGTTTGATTCCTAGTTCCTACATGGTAGGAGTCTGGAGGACATCTGTGTaGAGTAGAGCAAAGGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: VALPEDQGLIPSSYMVGVWRTSV*SRAKVS Trigger: GCTCACCTTTGCTCTACTCAACACAGATGTCCTCCA...GACTCCTACCATGTAGGAACTAGGAATCAAACCCTGGTCTTCTGGAAGAGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS-3UTR CAA 90 bp | GTAGAGCAGGAGGCTGTTTTTCAGACTGACATTATGGTGGATGCCAATGCTATCAGCGCATCTTCAGGATaGACACAAGGATGTAGACAT | + |
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Preference number: 5 (lower is better) Translates to: VEQEAVFQTDIMVDANAISASSG*TQGCRH Trigger: ATGTCTACATCCTTGTGTCAATCCTGAAGATGCGCT...GATAGCATTGGCATCCACCATAATGTCAGTCTGAAAAACAGCCTCCTGCTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217653.3 |
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| CDS GCA 72 bp | CCCATCCACCTAGGTAGGAAGTTCCAACTAGGAGGATaGAGACTGTGGAGGACATCTGTGTTGAGTAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: PIHLGRKFQLGG*RLWRTSVLSRA Trigger: TGCTCTACTCAACACAGATGTCCTCCACAGTCTGCATCCTCCTAGTTGGAACTTCCTACCTAGGTGGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071658.3 ENSMUST00000217653.3 |
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| CDS TCA 72 bp | GATTCAGATGTCCCAAATGCCACCACAATACAGAGTTaGGCCACACAGCCAGCCACAGGGATAAATGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: DSDVPNATTIQS*ATQPATGINVP Trigger: GGGAACATTTATCCCTGTGGCTGGCTGTGTGGCTCAACTCTGTATTGTGGTGGCATTTGGGACATCTGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071658.3 ENSMUST00000217653.3 |
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| CDS CCA 72 bp | CTAGGTAGGAAGTTCCAACTAGGAGGATGCAGACTGTaGAGGACATCTGTGTTGAGTAGAGCAAAGGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LGRKFQLGGCRL*RTSVLSRAKVS Trigger: GCTCACCTTTGCTCTACTCAACACAGATGTCCTCCACAGTCTGCATCCTCCTAGTTGGAACTTCCTACCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071658.3 ENSMUST00000217653.3 |
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| CDS CAA 72 bp | AGATTCAGATGTCCCAAATGCCACCACAATACAGAGTaGAGCCACACAGCCAGCCACAGGGATAAATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RFRCPKCHHNTE*SHTASHRDKCS Trigger: GGAACATTTATCCCTGTGGCTGGCTGTGTGGCTCAACTCTGTATTGTGGTGGCATTTGGGACATCTGAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071658.3 ENSMUST00000217653.3 |
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