Pregenerated sensors for OLFR479 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043855Ensembl transcript IDs: ENSMUST00000063151.6, ENSMUST00000209805.3, ENSMUST00000214599.2
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGCTATAGGAAAATGGTaGGACCAGGACAGTTCATGC | + |
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Preference number: 2 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKAIGKW*DQDSSC Trigger: GCATGAACTGTCCTGGTCTCACCATTTTCCTATAGC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| 3UTR TCA 72 bp | TTTTGTGGAGGAAGCTGCGAGGTCAGAGGGTGGATATaGAGGGATGGGGAAATGAGTGAGTGTTTGTTGATC | + |
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Preference number: 3 (lower is better) Translates to: FCGGSCEVRGWI*RDGEMSECLLI Trigger: GATCAACAAACACTCACTCATTTCCCCATCCCTTCATATCCACCCTCTGACCTCGCAGCTTCCTCCACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR TCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGTGGGAGGAGCACGTTaGGAAAGCCTTATGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKVGGAR*ESLMPP Trigger: GGGAGGCATAAGGCTTTCTCAACGTGCTCCTCCCAC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGCAGTGGGCTGTGGATaGCAGTGTAACGGTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKAVGCG*QCNGHR Trigger: CCTATGACCGTTACACTGCCATCCACAGCCCACTGC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGAAACAACTGTGAGGTaGGAGGAGCACGTTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKETTVR*EEHVEK Trigger: TTTCTCAACGTGCTCCTCCCACCTCACAGTTGTTTC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR TCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGTGTAAACAATGGGATTaGGCAGAGGTGTCAGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKCKQWD*AEVSVL Trigger: CAGTACTGACACCTCTGCTCAATCCCATTGTTTACA...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGATATGATAATGCAGTaGGCTGTGGATGGCAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKDMIMQ*AVDGSV Trigger: TACACTGCCATCCACAGCCCACTGCATTATCATATC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR TCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGAGGCATAGGAAATCATaGTTAAAACAAAGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKRHRKS*LKQSCP Trigger: TGGGCAGCTTTGTTTTAATCATGATTTCCTATGCCT...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR GCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGCCCACCAGCACAAATaGAGAGACCATAAAAATAAT | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKAHQHK*RDHKNN Trigger: ATTATTTTTATGGTCTCTGCATTTGTGCTGGTGGGC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGAGAAGAATAGTCACATaGGAGAGGAGAATCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKRRIVT*ERRITT Trigger: TGTTGTGATTCTCCTCTCCCATGTGACTATTCTTCT...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGAAGAAGAAAAACATCTaGGTAGCACATTCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKKKKNI*VAHSGR Trigger: TCTCCCTGAATGTGCTACCCAGATGTTTTTCTTCTT...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CCA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGCTGAGAGCAGACCTTTaGGGTCATAAAGATATGATA | + |
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Preference number: 4 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKLRADL*GHKDMI Trigger: TATCATATCTTTATGACCCCAAAGGTCTGCTCTCAG...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS CCA 90 bp | TTGATGGCCACCATGATGGATGCATTTGCTAGAAGAATAGTCACATaGGAGAGGAGAATCACAACAAAGAGTAGATTGTGTAGCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LMATMMDAFARRIVT*ERRITTKSRLCSSG Trigger: CCCAGAGCTACACAATCTACTCTTTGTTGTGATTCTCCTCTCCCATGTGACTATTCTTCTAGCAAATGCATCCATCATGGTGGCCATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063151.6 ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CAA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGGGAGAGAGATGGCCTaGCTCTCTGATAGCAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKGREMA*LSDSKS Trigger: GGACTTGCTATCAGAGAGCAAGGCCATCTCTCTCCC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CAA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGGCCATGATGAAACAGTaGTTGGCAGCTAGTCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKAMMKQ*LAASPK Trigger: CTTTGGACTAGCTGCCAACAACTGTTTCATCATGGC...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS-3UTR CAA 90 bp | GCAACCATAATCATGAAAATAGTGTTCCAAAGAACTCTGATACGTCTGTTAAAGAAGTGCTGGATAGTCTaGGAGTCACAGAAAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: ATIIMKIVFQRTLIRLLKKCWIV*ESQKDK Trigger: CTTGTCTTTCTGTGACTCCAAGACTATCCAGCACTT...CTTTAACAGACGTATCAGAGTTCTTTGGAACACTATTTTCATGATTATGGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209805.3 ENSMUST00000214599.2 |
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| CDS CAA 72 bp | AACATCTGGGTAGCACATTCAGGGAGAGAGATGGCCTaGCTCTCTGATAGCAAGTCCACTAACATTCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: NIWVAHSGREMA*LSDSKSTNIRG Trigger: GCCCCGAATGTTAGTGGACTTGCTATCAGAGAGCAAGGCCATCTCTCTCCCTGAATGTGCTACCCAGATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063151.6 ENSMUST00000209805.3 ENSMUST00000214599.2 |
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