Pregenerated sensors for OLFR47 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061210

Ensembl transcript IDs: ENSMUST00000215569.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CAA 90 bp	TCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGGTTGTTTCAGGTTAGGAGGAGATaGAGATCTCATGTCGTTAAA	+
Preference number: 3 (lower is better) Translates to: SLVRYHSAQVTVFGYGLFQVRRR*RSHVVK Trigger: TTTAACGACATGAGATCTCAATCTCCTCCTAACCTG...AAACAACCCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR TCA 90 bp	GGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGTGCATCCTGCAAAGGTaGTGGGCCTGGTCTCATCCA	+
Preference number: 4 (lower is better) Translates to: GTVTRKISLSAGHCVWIWCILQR*WAWSHP Trigger: TGGATGAGACCAGGCCCATCACCTTTGCAGGATGCA...CCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR TCA 90 bp	GTGGGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATAGGGGCCCCACTAAAGTaGACACACAGGCTGCAAAAA	+
Preference number: 4 (lower is better) Translates to: VGTVTRKISLSAGHCVWIGAPLK*THRLQK Trigger: TTTTTGCAGCCTGTGTGTTCACTTTAGTGGGGCCCC...TATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR TCA 90 bp	TTAGTCCTGCAGGTTAGGAGGAGATTGAGATCTCATGTCGTTAAACATGATAACTCCGGAGGGCACCCTTaGCTTCAGCATTCCTCAGGC	+
Preference number: 4 (lower is better) Translates to: LVLQVRRRLRSHVVKHDNSGGHP*LQHSSG Trigger: GCCTGAGGAATGCTGAAGTCAAGGGTGCCCTCCGGA...GTTATCATGTTTAACGACATGAGATCTCAATCTCCTCCTAACCTGCAGGACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR GCA 90 bp	TGTAATGTGGGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTCTGTGTCATGCATCCTaGAAAGGTGATGGGCCTGGT	+
Preference number: 4 (lower is better) Translates to: CNVGTVTRKISLSAGHCVLCHAS*KGDGPG Trigger: ACCAGGCCCATCACCTTTGCAGGATGCATGACACAG...AACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCCCACATTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR GCA 90 bp	GGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGCTGAATCCTCAGGATTaGCACCAGGATGCGTGTGTA	+
Preference number: 4 (lower is better) Translates to: GTVTRKISLSAGHCVWIWLNPQD*HQDACV Trigger: TACACACGCATCCTGGTGGCAATCCTGAGGATTCAG...CCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR CCA 90 bp	GGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGTACCAAGGCTTGTGGTaGGAACACCACACCAAACAA	+
Preference number: 4 (lower is better) Translates to: GTVTRKISLSAGHCVWIWYQGLW*EHHTKQ Trigger: TTGTTTGGTGTGGTGTTCCCACCACAAGCCTTGGTA...CCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR TCA 90 bp	TCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGGTTGTTTGAGACAGGAGAAAGCTaGCTATCCAGGAAACAGCAG	+
Preference number: 4 (lower is better) Translates to: SLVRYHSAQVTVFGYGLFETGES*LSRKQQ Trigger: CTGCTGTTTCCTGGATAGTCAGCTTTCTCCTGTCTC...AAACAACCCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR TCA 90 bp	GGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGCACACCAAACAAGAATaGCTTTCTTTGCACAGTGCC	+
Preference number: 4 (lower is better) Translates to: GTVTRKISLSAGHCVWIWHTKQE*LSLHSA Trigger: GGCACTGTGCAAAGAAAGTCATTCTTGTTTGGTGTG...CCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR CCA 90 bp	GGAACTGTCACTCGTAAGATATCACTCAGCGCAGGTCACTGTGTTTGGATATGGGTTTATGAGTGTCTGTaGCACTGTGTTGCAGGCATA	+
Preference number: 4 (lower is better) Translates to: GTVTRKISLSAGHCVWIWVYECL*HCVAGI Trigger: TATGCCTGCAACACAGTGCCACAGACACTCATAAAC...CCATATCCAAACACAGTGACCTGCGCTGAGTGATATCTTACGAGTGACAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR GCA 90 bp	AAGTTATTAGTCCTGCAGGTTAGGAGGAGATTGAGATCTCATGTCGTTAAACATAAAAGGATCTTCTGCTaGTCCTCTGGGTGCTGGGAC	+
Preference number: 4 (lower is better) Translates to: KLLVLQVRRRLRSHVVKHKRIFC*SSGCWD Trigger: GTCCCAGCACCCAGAGGAGCAGCAGAAGATCCTTTT...ATGTTTAACGACATGAGATCTCAATCTCCTCCTAACCTGCAGGACTAATAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
CDS-3UTR GCA 90 bp	TTAGTCCTGCAGGTTAGGAGGAGATTGAGATCTCATGTCGTTAAACATGATAACAGTGAACACACAGGCTaGAAAAATGACAACTTGATT	+
Preference number: 4 (lower is better) Translates to: LVLQVRRRLRSHVVKHDNSEHTG*KNDNLI Trigger: AATCAAGTTGTCATTTTTGCAGCCTGTGTGTTCACT...GTTATCATGTTTAACGACATGAGATCTCAATCTCCTCCTAACCTGCAGGACTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215569.2
3UTR CAA 72 bp	AATGCAAAGTTATTAGTCCTGCAGGTTAGGAGGAGATaGAGATCTCATGTCGTTAAACATGATAACAAAGGA	+
Preference number: 4 (lower is better) Translates to: NAKLLVLQVRRR*RSHVVKHDNKG Trigger: TCCTTTGTTATCATGTTTAACGACATGAGATCTCAATCTCCTCCTAACCTGCAGGACTAATAACTTTGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215569.2