Pregenerated sensors for OLFR466 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049806Ensembl transcript IDs: ENSMUST00000058907.4, ENSMUST00000214214.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATaGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCQRLEADYRMDPRI*QSLDGPSFRHSSKL Trigger: AAGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 90 bp | GCACCTGCACATGAGCTTGAGTGGTTTTTCTTTATGAGCTGGCCCTaGGGAATGTTTGTGGTTGTAGCTTCAGCCCCAAATTCTGAGCTA | + |
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Preference number: 1 (lower is better) Translates to: APAHELEWFFFMSWP*GMFVVVASAPNSEL Trigger: TAGCTCAGAATTTGGGGCTGAAGCTACAACCACAAACATTCCTCAGGGCCAGCTCATAAAGAAAAACCACTCAAGCTCATGTGCAGGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 90 bp | TTGTTTCTGAACTCTGCCTGGCTGGTTCATCGCAGCTATTCTGGCTaGAACTCCTTTCCAAGCTTACTGGTTCAATCTGGTTTCTCAGTA | + |
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Preference number: 1 (lower is better) Translates to: LFLNSAWLVHRSYSG*NSFPSLLVQSGFSV Trigger: TACTGAGAAACCAGATTGAACCAGTAAGCTTGGAAAGGAGTTTCAGCCAGAATAGCTGCGATGAACCAGCCAGGCAGAGTTCAGAAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR GCA 90 bp | GAGACAGCTACATCTGGGTCCTTTCAGCAAAATTTTGCTAGTGTATaGAATGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCC | + |
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Preference number: 1 (lower is better) Translates to: ETATSGSFQQNFASV*NGVSVWKLIIGWIP Trigger: GGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGCAAAATTTTGCTGAAAGGACCCAGATGTAGCTGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 90 bp | GTGAGAGTTGGATATATCTCTGAAAAATTTTGTCAAACCTTCCTCTaGTTCATCACTTTGTCTGACCCTCAGATAGAAGTCACTTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: VRVGYISEKFCQTFL*FITLSDPQIEVTFN Trigger: GTTGAAAGTGACTTCTATCTGAGGGTCAGACAAAGTGATGAATCAGAGGAAGGTTTGACAAAATTTTTCAGAGATATATCCAACTCTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR TCA 90 bp | GATCCCTTTAGCTCCTTGGGTACTCTCTCCAGCTTCTCCATTGGGGGCCCTGTGAGCTTGAGTCTGAGTTaGCCACCAGGCAGCACTTCC | + |
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Preference number: 2 (lower is better) Translates to: DPFSSLGTLSSFSIGGPVSLSLS*PPGSTS Trigger: GGAAGTGCTGCCTGGTGGTCAACTCAGACTCAAGCT...CACAGGGCCCCCAATGGAGAAGCTGGAGAGAGTACCCAAGGAGCTAAAGGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR GCA 90 bp | GATCCCTTTAGCTCCTTGGGTACTCTCTCCAGCTTCTCCATTGGGGGCCCTGTGTCACTGCACTCTCACTaGACTCACTGCGCTCACTCC | + |
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Preference number: 2 (lower is better) Translates to: DPFSSLGTLSSFSIGGPVSLHSH*THCAHS Trigger: GGAGTGAGCGCAGTGAGTGCAGTGAGAGTGCAGTGA...CACAGGGCCCCCAATGGAGAAGCTGGAGAGAGTACCCAAGGAGCTAAAGGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGCCAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCATCACTGCACTCTCACTaGACTCTCACTGCACTCACT | + |
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Preference number: 2 (lower is better) Translates to: FARPRHSLTRDSYIWVLSSLHSH*TLTALT Trigger: AGTGAGTGCAGTGAGAGTGCAGTGAGAGTGCAGTGA...TGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATGGCAGTACACTGCACTCACACTaGACTCTCACTGCACTCACT | + |
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Preference number: 2 (lower is better) Translates to: NGVSVWKLIIGWIPGYGSTLHSH*TLTALT Trigger: AGTGAGTGCAGTGAGAGTGCAGTGTGAGTGCAGTGT...ACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCGCAGCTATTCTGGCTGAAACTCCTTTCCAAGCTTACTGGTTCAATCTGGTTCAACTGCCTCTGCTaGCCTGAACTGCTTGACTTC | + |
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Preference number: 2 (lower is better) Translates to: SSQLFWLKLLSKLTGSIWFNCLC*PELLDF Trigger: GAAGTCAAGCAGTTCAGGTCAGCAGAGGCAGTTGAA...CCAGATTGAACCAGTAAGCTTGGAAAGGAGTTTCAGCCAGAATAGCTGCGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCACTAAGCCCCATTATGTaGAAAAGCAAGCTTATCTAC | + |
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Preference number: 2 (lower is better) Translates to: FARPRHSLTRDSYIWVLSLSPIM*KSKLIY Trigger: GTAGATAAGCTTGCTTTTCCACATAATGGGGCTTAG...TGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTGGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR GCA 90 bp | AATGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATGGCAGTAAGTCCAGGTTACTTTaGGAGACCTACATCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NGVSVWKLIIGWIPGYGSKSRLL*ETYIQR Trigger: TCTCTGGATGTAGGTCTCGCAAAGTAACCTGGACTT...ACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCACTTACTGGTTCAATCTaGTTTCTCAGTAAATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FARPRHSLTRDSYIWVLSLTGSI*FLSKLL Trigger: GAGCAATTTACTGAGAAACCAGATTGAACCAGTAAG...TGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR TCA 90 bp | TCATCGCAGCTATTCTGGCTGAAACTCCTTTCCAAGCTTACTGGTTCAATCTGGCTCTTTCTTATTCTCTaGCTTCAACTGCCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSQLFWLKLLSKLTGSIWLFLIL*LQLPLL Trigger: CAGCAGAGGCAGTTGAAGTCAGAGAATAAGAAAGAG...CCAGATTGAACCAGTAAGCTTGGAAAGGAGTTTCAGCCAGAATAGCTGCGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCATTTCCTTCCTGTCTCTTATTCATCACTTTGTCTaGCCCTCAGATAGAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: TDSLFLHCSLSIISFLSLIHHFV*PSDRSH Trigger: GTGACTTCTATCTGAGGGTCAGACAAAGTGATGAAT...AAGAGACAGGAAGGAAATGATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR GCA 90 bp | AGACAGCTACATCTGGGTCCTTTCAGCAAAATTTTGCTAGTGTATGCAATGGTGTCTCTCTTCCTGCACTaGTCTTTAAGTATCATTTCC | + |
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Preference number: 2 (lower is better) Translates to: RQLHLGPFSKILLVYAMVSLFLH*SLSIIS Trigger: GGAAATGATACTTAAAGAGCAGTGCAGGAAGAGAGA...CACCATTGCATACACTAGCAAAATTTTGCTGAAAGGACCCAGATGTAGCTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACTGAACTCAACTGATTTAACAGAACTGACTGACTCTCTCTTCCTGCACAGTAGCTTCCAAGTGTaGGTAAGTGTTCATAAGACT | + |
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Preference number: 2 (lower is better) Translates to: IALNSTDLTELTDSLFLHSSFQV*VSVHKT Trigger: AGTCTTATGAACACTTACCCACACTTGGAAGCTACT...GTGCAGGAAGAGAGAGTCAGTCAGTTCTGTTAAATCAGTTGAGTTCAGTGCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGCACTGAACTCAACTGATTTAACAGAACTGACTGACTCTCTCTTCCTGCACTTAGGCTCCTGTATATaGGGCAAAATAAACACATAC | + |
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Preference number: 2 (lower is better) Translates to: IALNSTDLTELTDSLFLHLGSCI*GKINTY Trigger: GTATGTGTTTATTTTGCCTCATATACAGGAGCCTAA...GTGCAGGAAGAGAGAGTCAGTCAGTTCTGTTAAATCAGTTGAGTTCAGTGCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCATTTCCTTCCTGTCTCTTAGTCACTTTCAACCATaGCTGTTTCCTTCTATGAAA | + |
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Preference number: 2 (lower is better) Translates to: TDSLFLHCSLSIISFLSLSHFQP*LFPSMK Trigger: TTTCATAGAAGGAAACAGCCATGGTTGAAAGTGACT...AAGAGACAGGAAGGAAATGATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGATTTAACAGAACTGACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCAAATGTATGGCAGAGTaGACACTTGTTATCTTCACT | + |
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Preference number: 2 (lower is better) Translates to: TDLTELTDSLFLHCSLSIKCMAE*TLVIFT Trigger: AGTGAAGATAACAAGTGTGCACTCTGCCATACATTT...GATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGTCAGTTCTGTTAAATCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 72 bp | TCAACTGCCTCTGCTGACCTGAACTGCTTGACTTCATaGACAAACTCAGCTGCACCGCACTGTGCTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: STASADLNCLTS*TNSAAPHCAHC Trigger: GCAGTGAGCACAGTGCGGTGCAGCTGAGTTTGTTCATGAAGTCAAGCAGTTCAGGTCAGCAGAGGCAGTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCATATGCCGGCCAGTCATaGCCACAGAAAAATAACTCA | + |
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Preference number: 3 (lower is better) Translates to: FARPRHSLTRDSYIWVLSYAGQS*PQKNNS Trigger: TGAGTTATTTTTCTGTGGCAATGACTGGCCGGCATA...TGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTGGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR CCA 72 bp | CGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATaGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGC | + |
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Preference number: 3 (lower is better) Translates to: RLEADYRMDPRI*QSLDGPSFRHS Trigger: GCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCATTTCCTTCCTGTCTCTTGAAGTCCAGGTTACTTaGCGAGACCTACATCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: TDSLFLHCSLSIISFLSLEVQVT*RDLHPE Trigger: CTCTGGATGTAGGTCTCGCAAAGTAACCTGGACTTC...AAGAGACAGGAAGGAAATGATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 72 bp | GGCTCTTTCTTATTCTCTGACTTCAACTGCCTCTGCTaGCCTGAACTGCTTGACTTCATGAACAAACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GSFLFSDFNCLC*PELLDFMNKLS Trigger: GCTGAGTTTGTTCATGAAGTCAAGCAGTTCAGGTCAGCAGAGGCAGTTGAAGTCAGAGAATAAGAAAGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 72 bp | CATGAGCTTGAGTGGTTTTTCTTTATGAGCTGGCCCTaGGGAATGTTTGTGGTTGTAGCTTCAGCCCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: HELEWFFFMSWP*GMFVVVASAPN Trigger: ATTTGGGGCTGAAGCTACAACCACAAACATTCCTCAGGGCCAGCTCATAAAGAAAAACCACTCAAGCTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 72 bp | TTGTTGCTGAATAAGCTCACCTTTTCTAGTTGTTTCTaGACTCTGCCTGGCTGGTTCATCGCAGCTATTCTG | + |
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Preference number: 3 (lower is better) Translates to: LLLNKLTFSSCF*TLPGWFIAAIL Trigger: CAGAATAGCTGCGATGAACCAGCCAGGCAGAGTTCAGAAACAACTAGAAAAGGTGAGCTTATTCAGCAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR GCA 72 bp | GCTATTTCATGCTGCTATAATATGCCGGCCAGTCATTaGCACAGAAAAATAACTCATCTCAGAGCAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: AISCCYNMPASH*HRKITHLRAGS Trigger: TGACCCTGCTCTGAGATGAGTTATTTTTCTGTGGCAATGACTGGCCGGCATATTATAGCAGCATGAAATAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR TCA 72 bp | ATTTTGTCAAACCTTCCTCTGATTCATCACTTTGTCTaGCCCTCAGATAGAAGTCACTTTCAACCATGGCTG | + |
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Preference number: 3 (lower is better) Translates to: ILSNLPLIHHFV*PSDRSHFQPWL Trigger: CAGCCATGGTTGAAAGTGACTTCTATCTGAGGGTCAGACAAAGTGATGAATCAGAGGAAGGTTTGACAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR GCA 72 bp | ACATCTGGGTCCTTTCAGCAAAATTTTGCTAGTGTATaGAATGGTGTCAGCGTTTGGAAGCTGATTATAGGA | + |
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Preference number: 3 (lower is better) Translates to: TSGSFQQNFASV*NGVSVWKLIIG Trigger: TCCTATAATCAGCTTCCAAACGCTGACACCATTGCATACACTAGCAAAATTTTGCTGAAAGGACCCAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR GCA 72 bp | CCAAGCTTACTGGTTCAATCTGGTTTCTCAGTAAATTaGTCTGTTTGGTCTCAAACTAACTCTGGCAATTTG | + |
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Preference number: 3 (lower is better) Translates to: PSLLVQSGFSVN*SVWSQTNSGNL Trigger: CAAATTGCCAGAGTTAGTTTGAGACCAAACAGAGCAATTTACTGAGAAACCAGATTGAACCAGTAAGCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR GCA 90 bp | TTTGCCAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAGACACCACTTTGCTCTaGTCCATGGAGGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: FARPRHSLTRDSYIWVLSDTTLL*SMEETA Trigger: TGCTGTCTCCTCCATGGAGCAGAGCAAAGTGGTGTC...TGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CCA 90 bp | TCATCGCAGCTATTCTGGCTGAAACTCCTTTCCAAGCTTACTGGTTCAATCTGGCTTTGCTCTGCTCCATaGAGGAGACAGCACTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SSQLFWLKLLSKLTGSIWLCSAP*RRQHWA Trigger: AGCCCAGTGCTGTCTCCTCCATGGAGCAGAGCAAAG...CCAGATTGAACCAGTAAGCTTGGAAAGGAGTTTCAGCCAGAATAGCTGCGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTAGCTCCTTGGGTACTCTCTCCAGCTTCTCCATTGGGGGCCCTGTGGCAAGAAGAACCAGCTaGTTTATAAAAGTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: DPFSSLGTLSSFSIGGPVARRTS*FIKVSE Trigger: TTCAGACACTTTTATAAACCAGCTGGTTCTTCTTGC...CACAGGGCCCCCAATGGAGAAGCTGGAGAGAGTACCCAAGGAGCTAAAGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CCA 90 bp | TCATCGCAGCTATTCTGGCTGAAACTCCTTTCCAAGCTTACTGGTTCAATCTGGCAGACACCAATCAAGTaGGAGGCACACGTGGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSQLFWLKLLSKLTGSIWQTPIK*EAHVEK Trigger: TTTCTCCACGTGTGCCTCCCACTTGATTGGTGTCTG...CCAGATTGAACCAGTAAGCTTGGAAAGGAGTTTCAGCCAGAATAGCTGCGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR GCA 90 bp | AATGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATGGCAGTGACAGCACTGGGCTGTaGATACATGAAGAAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: NGVSVWKLIIGWIPGYGSDSTGL*IHEENS Trigger: ACTGTTTTCTTCATGTATGCACAGCCCAGTGCTGTC...ACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR GCA 90 bp | AATGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATGGCAGTCAGGAACAAAATCTCTaGTTGCTTCTCTTCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NGVSVWKLIIGWIPGYGSQEQNL*LLLFSA Trigger: AGCACTGAAGAGAAGCAAGCAGAGATTTTGTTCCTG...ACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CCA 90 bp | AATGGTGTCAGCGTTTGGAAGCTGATTATAGGATGGATCCCCGGATATGGCAGTAAAAAGGAAAGGCTCTaGAGGAAGGCATACATAGGA | + |
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Preference number: 4 (lower is better) Translates to: NGVSVWKLIIGWIPGYGSKKERL*RKAYIG Trigger: TCCTATGTATGCCTTCCTCCAGAGCCTTTCCTTTTT...ACTGCCATATCCGGGGATCCATCCTATAATCAGCTTCCAAACGCTGACACCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CCA 90 bp | ACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCATTTCCTTCCTGTCTCTTGCATACATAGGAGTATaGAGGTGTGCATCCATCCTG | + |
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Preference number: 4 (lower is better) Translates to: TDSLFLHCSLSIISFLSLAYIGV*RCASIL Trigger: CAGGATGGATGCACACCTCCATACTCCTATGTATGC...AAGAGACAGGAAGGAAATGATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| 3UTR CAA 72 bp | AAGAGACAGCTACATCTGGGTCCTTTCAGCAAAATTTaGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KRQLHLGPFSKI*LVYAMVSAFGS Trigger: GCTTCCAAACGCTGACACCATTGCATACACTAGCAAAATTTTGCTGAAAGGACCCAGATGTAGCTGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR TCA 90 bp | GATATGGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACTTTTAGACACAAAAAGTCAAAGTaGAGGTCATTGTGGTTTGCG | + |
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Preference number: 4 (lower is better) Translates to: DMAVSRWSILSSQLQTFRHKKSK*RSLWFA Trigger: CGCAAACCACAATGACCTTCACTTTGACTTTTTGTG...TCTAAAAGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR GCA 90 bp | ATTGCACTGAACTCAACTGATTTAACAGAACTGACTGACTCTCTCTTCCTGCACAAGGTCATTGTGGTTTaGGTGACAGCATTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: IALNSTDLTELTDSLFLHKVIVV*VTAFTA Trigger: TGCAGTGAATGCTGTCACGCAAACCACAATGACCTT...GTGCAGGAAGAGAGAGTCAGTCAGTTCTGTTAAATCAGTTGAGTTCAGTGCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR TCA 90 bp | GATATGGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACTTTTAGATGGGCTGTGCATACATaGAGAAAACAGTACCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: DMAVSRWSILSSQLQTFRWAVHT*RKQYQK Trigger: TTTTTGGTACTGTTTTCTTCATGTATGCACAGCCCA...TCTAAAAGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR GCA 90 bp | AGACAGCTACATCTGGGTCCTTTCAGCAAAATTTTGCTAGTGTATGCAATGGTGCTTGCTTCTCTTCAGTaGTTGTTTGACATCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RQLHLGPFSKILLVYAMVLASLQ*LFDIFV Trigger: AACAAAGATGTCAAACAAGCACTGAAGAGAAGCAAG...CACCATTGCATACACTAGCAAAATTTTGCTGAAAGGACCCAGATGTAGCTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR GCA 90 bp | ACTGATTTAACAGAACTGACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCAACAAAATCTCTGCTTaGTTCTCTTCAGTGCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: TDLTELTDSLFLHCSLSINKISA*FSSVLV Trigger: AACAAGCACTGAAGAGAAGCAAGCAGAGATTTTGTT...GATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGTCAGTTCTGTTAAATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CCA 90 bp | GACTTTCTAAGGAAATGTATGGCAGAGTGCACACTTGTTATCTTCACTATGAGAGGAGAAATGCTTCTGTaGTACCAAAAAGAGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: DFLRKCMAECTLVIFTMRGEMLL*YQKETK Trigger: TTTTGTCTCTTTTTGGTACCACAGAAGCATTTCTCC...TCTCATAGTGAAGATAACAAGTGTGCACTCTGCCATACATTTCCTTAGAAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CAA 90 bp | TTTGCCAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCAAAGATAGACACCACTTaGCTCTGCTCCATGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: FARPRHSLTRDSYIWVLSKIDTT*LCSMEE Trigger: CTCCTCCATGGAGCAGAGCAAAGTGGTGTCTATCTT...TGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CAA 90 bp | ACTGATTTAACAGAACTGACTGACTCTCTCTTCCTGCACTGCTCTTTAAGTATCGAAGGTCATTGTGGTTaGCGTGACAGCATTCACTGC | + |
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Preference number: 5 (lower is better) Translates to: TDLTELTDSLFLHCSLSIEGHCG*RDSIHC Trigger: GCAGTGAATGCTGTCACGCAAACCACAATGACCTTC...GATACTTAAAGAGCAGTGCAGGAAGAGAGAGTCAGTCAGTTCTGTTAAATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS-3UTR CAA 90 bp | GACTTTCTAAGGAAATGTATGGCAGAGTGCACACTTGTTATCTTCACTATGAGAGAACAAAATCTCTGCTaGCTTCTCTTCAGTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: DFLRKCMAECTLVIFTMREQNLC*LLFSAC Trigger: ACAAGCACTGAAGAGAAGCAAGCAGAGATTTTGTTC...TCTCATAGTGAAGATAACAAGTGTGCACTCTGCCATACATTTCCTTAGAAAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214214.2 |
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| CDS CCA 72 bp | AAGGAAAGGCTCTGGAGGAAGGCATACATAGGAGTATaGAGGTGTGCATCCATCCTGATAATTATAATCATG | + |
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Preference number: 6 (lower is better) Translates to: KERLWRKAYIGV*RCASILIIIIM Trigger: CATGATTATAATTATCAGGATGGATGCACACCTCCATACTCCTATGTATGCCTTCCTCCAGAGCCTTTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058907.4 ENSMUST00000214214.2 |
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