Pregenerated sensors for OLFR462 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093839Ensembl transcript IDs: ENSMUST00000049743.2, ENSMUST00000213672.2, ENSMUST00000213928.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGCGTCTGTCAGGAGCACATCCAGGGCAGGAGTCCTTGTCTTTaGCTGCCCTGGTGTCCTCCTCCCTCGAAGGGTGCCATTGGATGG | + |
|
Preference number: 1 (lower is better) Translates to: PCVCQEHIQGRSPCL*LPWCPPPSKGAIGW Trigger: CCATCCAATGGCACCCTTCGAGGGAGGAGGACACCAGGGCAGTCAAAGACAAGGACTCCTGCCCTGGATGTGCTCCTGACAGACGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 90 bp | TCCTCCTCCCTCGAAGGGTGCCATTGGATGGTGCTGCTCCAGGGATaGTCCTCTTGCTGCCTTCGGGGCAGGCAGTATTGGAAGGGATCC | + |
|
Preference number: 1 (lower is better) Translates to: SSSLEGCHWMVLLQG*SSCCLRGRQYWKGS Trigger: GGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCACCCTTCGAGGGAGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 90 bp | GAAGGGTGCCATTGGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTaGCTTCGGGGCAGGCAGTATTGGAAGGGATCCCCTGCATTTGTC | + |
|
Preference number: 1 (lower is better) Translates to: EGCHWMVLLQGCSSC*LRGRQYWKGSPAFV Trigger: GACAAATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCACCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 90 bp | CTCGAAGGGTGCCATTGGATGGTGCTGCTCCAGGGATGCTCCTCTTaGTGCCTTCGGGGCAGGCAGTATTGGAAGGGATCCCCTGCATTT | + |
|
Preference number: 1 (lower is better) Translates to: LEGCHWMVLLQGCSS*CLRGRQYWKGSPAF Trigger: AAATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCACCCTTCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 90 bp | ACAATCCATTGTGAGTGGGGCCACTGCTGGGCTGGTGGTCCTGGATaGGCAAGCCATGGGGAGCAAGTCAGTAAGCAGCATCCCTCCATG | + |
|
Preference number: 1 (lower is better) Translates to: TIHCEWGHCWAGGPG*ASHGEQVSKQHPSM Trigger: CATGGAGGGATGCTGCTTACTGACTTGCTCCCCATGGCTTGCTCATCCAGGACCACCAGCCCAGCAGTGGCCCCACTCACAATGGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 90 bp | CTCCTCTTGCTGCCTTCGGGGCAGGCAGTATTGGAAGGGATCCCCTaGATTTGTCTCTGCCTTCTTCCCAGCTCCCTCAGCTCTTCCTCT | + |
|
Preference number: 1 (lower is better) Translates to: LLLLPSGQAVLEGIP*ICLCLLPSSLSSSS Trigger: AGAGGAAGAGCTGAGGGAGCTGGGAAGAAGGCAGAGACAAATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | TTCCCAGCTCCCTCAGCTCTTCCTCTGGGTGCCTACTGGGTATTCTaGCATGGATGTCACCACAAGTATCCCCTTGGGGTACCTCGGTTA | + |
|
Preference number: 1 (lower is better) Translates to: FPAPSALPLGAYWVF*HGCHHKYPLGVPRL Trigger: TAACCGAGGTACCCCAAGGGGATACTTGTGGTGACATCCATGCCAGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGGGAGCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 90 bp | ACCAACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATaGTGCAAAGACAGAGCAAGCCAAGTGAGAGCAGAACCCTCCCCA | + |
|
Preference number: 1 (lower is better) Translates to: TNLLFPPSYTNPGSG*CKDRASQVRAEPSP Trigger: TGGGGAGGGTTCTGCTCTCACTTGGCTTGCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | CTCCTACCAACCCCACTGATTACGGGTTTCACACCTTGGGTGTGGTaGACAGTCACCCTCACTGTCCCCACTAACACACACACACATCAC | + |
|
Preference number: 1 (lower is better) Translates to: LLPTPLITGFTPWVW*TVTLTVPTNTHTHH Trigger: GTGATGTGTGTGTGTGTTAGTGGGGACAGTGAGGGTGACTGTCCACCACACCCAAGGTGTGAAACCCGTAATCAGTGGGGTTGGTAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | AGCTCCCTCAGCTCTTCCTCTGGGTGCCTACTGGGTATTCTGGCATaGATGTCACCACAAGTATCCCCTTGGGGTACCTCGGTTATTGAG | + |
|
Preference number: 1 (lower is better) Translates to: SSLSSSSGCLLGILA*MSPQVSPWGTSVIE Trigger: CTCAATAACCGAGGTACCCCAAGGGGATACTTGTGGTGACATCCATGCCAGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGGGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 90 bp | AACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTaGAAAGACAGAGCAAGCCAAGTGAGAGCAGAACCCTCCCCATAC | + |
|
Preference number: 1 (lower is better) Translates to: NLLFPPSYTNPGSGC*KDRASQVRAEPSPY Trigger: GTATGGGGAGGGTTCTGCTCTCACTTGGCTTGCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | AGACTCCTACCAACCCCACTGATTACGGGTTTCACACCTTGGGTGTaGTGGACAGTCACCCTCACTGTCCCCACTAACACACACACACAT | + |
|
Preference number: 1 (lower is better) Translates to: RLLPTPLITGFTPWV*WTVTLTVPTNTHTH Trigger: ATGTGTGTGTGTGTTAGTGGGGACAGTGAGGGTGACTGTCCACCACACCCAAGGTGTGAAACCCGTAATCAGTGGGGTTGGTAGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 90 bp | GCATTCTTTAAATTAGTGATTGATGGGGAAAGGCACAATCCATTGTaGGTGGGGCCACTGCTGGGCTGGTGGTCCTGGATGAGCAAGCCA | + |
|
Preference number: 1 (lower is better) Translates to: AFFKLVIDGERHNPL*VGPLLGWWSWMSKP Trigger: TGGCTTGCTCATCCAGGACCACCAGCCCAGCAGTGGCCCCACTCACAATGGATTGTGCCTTTCCCCATCAATCACTAATTTAAAGAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | CCTCCTCCCCAGCCACTGGGGACATGTGGCCCTACCTCACTGTACTaGATAGCTTTATATCAATGTGACACAAGCTATAGTCATCTGAGA | + |
|
Preference number: 1 (lower is better) Translates to: PPPQPLGTCGPTSLY*IALYQCDTSYSHLR Trigger: TCTCAGATGACTATAGCTTGTGTCACATTGATATAAAGCTATCCAGTACAGTGAGGTAGGGCCACATGTCCCCAGTGGCTGGGGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | GTAGACCATATTGAAGGTATCAGCCCACATCCATCGTCACTCTCTTaGAACAGTCCCCACCCACAACCCTTGCTGAAGGGGAACAGTATA | + |
|
Preference number: 1 (lower is better) Translates to: VDHIEGISPHPSSLS*NSPHPQPLLKGNSI Trigger: TATACTGTTCCCCTTCAGCAAGGGTTGTGGGTGGGGACTGTTCCAAGAGAGTGACGATGGATGTGGGCTGATACCTTCAATATGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | CAGGAAATAGTCTATCCTGAGGAAGGCATGGTGGGTGAAACAACTTaGTCCTTAATGTCAGGAGTGAGGGGTGGTGGGAACAAAGTACCT | + |
|
Preference number: 1 (lower is better) Translates to: QEIVYPEEGMVGETT*SLMSGVRGGGNKVP Trigger: AGGTACTTTGTTCCCACCACCCCTCACTCCTGACATTAAGGACCAAGTTGTTTCACCCACCATGCCTTCCTCAGGATAGACTATTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | CAGGCAAGAGAAGGTGAGGTGAGAAAGGAAGAGACTCATTCCTTATaGCTTCTTGCTCCCAAGGGAGACTCTCTTACATCTAGGAGATCC | + |
|
Preference number: 1 (lower is better) Translates to: QAREGEVRKEETHSL*LLAPKGDSLTSRRS Trigger: GGATCTCCTAGATGTAAGAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAATGAGTCTCTTCCTTTCTCACCTCACCTTCTCTTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 90 bp | TTTTTGCCCTTATGTGGACAGTTCCACAGGCAAGAGAAGGTGAGGTaGGAAAGGAAGAGACTCATTCCTTATGGCTTCTTGCTCCCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: FLPLCGQFHRQEKVR*ERKRLIPYGFLLPR Trigger: CCTTGGGAGCAAGAAGCCATAAGGAATGAGTCTCTTCCTTTCTCACCTCACCTTCTCTTGCCTGTGGAACTGTCCACATAAGGGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | CCCTCACTGTCCCCACTAACACACACACACATCACAGAAGATTTCTaGCCACTTCAGTGCACGATTCAATTGACAGAAGAAATATGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: PSLSPLTHTHITEDF*PLQCTIQLTEEICL Trigger: CAAACATATTTCTTCTGTCAATTGAATCGTGCACTGAAGTGGCCAGAAATCTTCTGTGATGTGTGTGTGTGTTAGTGGGGACAGTGAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | CAGAAAATGCTTAGAAGAGAGGTGACACACAGAGATAGTCTTCTGTaGGCAATGCCATCATCACAAATGAGAAGTTTCTATCCATCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: QKMLRREVTHRDSLL*AMPSSQMRSFYPSE Trigger: TTCTGATGGATAGAAACTTCTCATTTGTGATGATGGCATTGCCCACAGAAGACTATCTCTGTGTGTCACCTCTCTTCTAAGCATTTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 90 bp | AACAGGTCCTTTACAAAGACAAGCTGTGAAAACATGCTTAAGCTATaGGAAGTAAGAATGTATACTTCTAAAAAGGACAAACCACAGGGA | + |
|
Preference number: 1 (lower is better) Translates to: NRSFTKTSCENMLKL*EVRMYTSKKDKPQG Trigger: TCCCTGTGGTTTGTCCTTTTTAGAAGTATACATTCTTACTTCCCATAGCTTAAGCATGTTTTCACAGCTTGTCTTTGTAAAGGACCTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 90 bp | CCTCGAAGGGTGCCATTGGATGGTGCTGCTCCAGGGATGCTCCTCTaGCTGCCTTCGGGGCAGGCAGTATTGGAAGGGATCCCCTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: PRRVPLDGAAPGMLL*LPSGQAVLEGIPCI Trigger: AATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCACCCTTCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCAGCCAGCAAGGCTCAGAGGTCTCCCCGTCTCTGCCTCTCCATCATTAGGGGTGCATTGAGACTTTaGGAGTGCTGGAAGTGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WPASKAQRSPRLCLSIIRGALRL*ECWKWG Trigger: CCCCCACTTCCAGCACTCTCAAAGTCTCAATGCACC...CCTAATGATGGAGAGGCAGAGACGGGGAGACCTCTGAGCCTTGCTGGCTGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTAGTCAGGAGTGAGGGGTaGTGGGAACAAAGTACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LDGAAPGMLLLLPSGQAVVRSEG*WEQSTW Trigger: CCAGGTACTTTGTTCCCACCACCCCTCACTCCTGAC...TACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 90 bp | AATGACTCCCCTTTGACTTGCATGGGACATCCTGGCCTGCCTATGTaGTGCCCTGCGTCTGTCAGGAGCACATCCAGGGCAGGAGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NDSPLTCMGHPGLPM*CPASVRSTSRAGVL Trigger: AAGGACTCCTGCCCTGGATGTGCTCCTGACAGACGCAGGGCACAACATAGGCAGGCCAGGATGTCCCATGCAAGTCAAAGGGGAGTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCAGCCAGCAAGGCTCAGAGGTCTCCCCGTCTCTGCCTCTCCATCATTAGGGGAAGGCATGGTGGGTaGAACAACTTGGTCCTTAAT | + |
|
Preference number: 2 (lower is better) Translates to: WPASKAQRSPRLCLSIIRGRHGG*NNLVLN Trigger: ATTAAGGACCAAGTTGTTTCACCCACCATGCCTTCC...CCTAATGATGGAGAGGCAGAGACGGGGAGACCTCTGAGCCTTGCTGGCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCACGGGTTTCACACCTTaGGTGTGGTGGACAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSTGFTP*VWWTVT Trigger: GGTGACTGTCCACCACACCCAAGGTGTGAAACCCGT...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCAACGGGCACGACACATaGGCATCAGGCACAACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSNGHDT*ASGTTK Trigger: TTTAGTTGTGCCTGATGCTCATGTGTCGTGCCCGTT...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGCCCTGCGTCTGTCAGGAGCACATCCAGGGCAGGAGTCCTTGTCTTTGACTGGAAAATAGCAATTTaGCTAGACTGGCCAGCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LCPASVRSTSRAGVLVFDWKIAI*LDWPAS Trigger: GCTGGCTGGCCAGTCTAGCCAAATTGCTATTTTCCA...GTCAAAGACAAGGACTCCTGCCCTGGATGTGCTCCTGACAGACGCAGGGCACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTAATGCCTCCATACAATTaGACTGCAGGAAAACCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: LDGAAPGMLLLLPSGQAVMPPYN*TAGKPV Trigger: TACAGGTTTTCCTGCAGTCCAATTGTATGGAGGCAT...TACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTTCCCAGCTCCCTCAGCTCTTCCTCTGGGTGCCTACTGGGTATTCTGGCATGAAAGGTCCCCATTTTTaGCCTTATGTGGACAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSQLPQLFLWVPTGYSGMKGPHF*PYVDSS Trigger: GGAACTGTCCACATAAGGGCAAAAATGGGGACCTTT...CATGCCAGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGGGAGCTGGGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCAAGCCAAGTGAGAGCAGAACCCTCCCCATACTCACCCTGAGACACCTGGCCAGAATTCAATGCTaGGACTTCCTCAATCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: QSKPSESRTLPILTLRHLARIQC*DFLNHS Trigger: AGAGTGATTGAGGAAGTCCCAGCATTGAATTCTGGC...CAGGTGTCTCAGGGTGAGTATGGGGAGGGTTCTGCTCTCACTTGGCTTGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGCAAGCCAAGTGAGAGCAGAACCCTCCCCATACTCACCCTGAGACACCTGGGATACAGCTTCCCTTaGAATGTAAACCATAACCTA | + |
|
Preference number: 2 (lower is better) Translates to: QSKPSESRTLPILTLRHLGYSFP*NVNHNL Trigger: TAGGTTATGGTTTACATTGCAAGGGAAGCTGTATCC...CAGGTGTCTCAGGGTGAGTATGGGGAGGGTTCTGCTCTCACTTGGCTTGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR GCA 90 bp | TACCAACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAATTCCTTATGGCTTCTTaGTCCCAAGGGAGACTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YQLAFSTFLHQPRQRMLQFLMAS*SQGRLS Trigger: AGAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAA...TTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCCTGAGACACCTGGACCACCCAATTCTTATTTCTCTTCTGACTTTCTCAGTGTCCTTGTCTTTGACTaGCCTGGTGTCCTCCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HPETPGPPNSYFSSDFLSVLVFD*PGVLLP Trigger: AGGGAGGAGGACACCAGGGCAGTCAAAGACAAGGAC...ACTGAGAAAGTCAGAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCTGTGGCATGTGTCTGTaGACATGTTTGTACATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSCGMCL*TCLYMF Trigger: GAACATGTACAAACATGTCCACAGACACATGCCACA...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 90 bp | CCACATCCATCGTCACTCTCTTGGAACAGTCCCCACCCACAACCCTaGCTGAAGGGGAACAGTATAATGATACTTACACTCAATAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PHPSSLSWNSPHPQP*LKGNSIMILTLNSL Trigger: GAGGCTATTGAGTGTAAGTATCATTATACTGTTCCCCTTCAGCAAGGGTTGTGGGTGGGGACTGTTCCAAGAGAGTGACGATGGATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCTGCCATCATCACAAATaGGAAGTTTCTATCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSCHHHK*EVSIHQ Trigger: CTGATGGATAGAAACTTCTCATTTGTGATGATGGCA...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCCTGAGACACCTGGACCACCCAATTCTTATTTCTCTTCTGACTTTCTCAGTCCTCAGCTCTTCCTCTaGGTGCCTACTGGGTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HPETPGPPNSYFSSDFLSPQLFL*VPTGYS Trigger: AGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGG...ACTGAGAAAGTCAGAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCAACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAGACAGACAGACAGAGTaGGTTTTGAAGAGACATAGC | + |
|
Preference number: 2 (lower is better) Translates to: YQLAFSTFLHQPRQRMLQDRQTE*VLKRHS Trigger: GCTATGTCTCTTCAAAACCCACTCTGTCTGTCTGTC...TTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCAGGGTGTGGTGACAAGGAAGTACTTTGTAGTTTTATTATTGCTTGTGAATCCACTGCTGGGCTGGTaGTCCTGGATGAGCAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: CQGVVTRKYFVVLLLLVNPLLGW*SWMSKP Trigger: TGGCTTGCTCATCCAGGACCACCAGCCCAGCAGTGG...ATTCACAAGCAATAATAAAACTACAAAGTACTTCCTTGTCACCACACCCTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAGAGACTCATTCCTTATGGCTTCTTGCTCCCAAGGGAGACTCTCTTACAAGAAGAGGGTTGTGTTaGCTCACAGCTGCAGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: KEETHSLWLLAPKGDSLTRRGLC*LTAAGN Trigger: ATTTCCTGCAGCTGTGAGCCAACACAACCCTCTTCT...TGTAAGAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAATGAGTCTCTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCCTGAGACACCTGGACCACCCAATTCTTATTTCTCTTCTGACTTTCTCAGTCTGGGTATTCTGGCATaGATGTCACCACAAGTATCC | + |
|
Preference number: 2 (lower is better) Translates to: HPETPGPPNSYFSSDFLSLGILA*MSPQVS Trigger: GGATACTTGTGGTGACATCCATGCCAGAATACCCAG...ACTGAGAAAGTCAGAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TACCAACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAACTGGTTACAATGTATTaGTGCATTGAGACTTTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: YQLAFSTFLHQPRQRMLQLVTMY*CIETLR Trigger: TCTCAAAGTCTCAATGCACCAATACATTGTAACCAG...TTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 90 bp | ACGGGCACGACACATGAGCATCAGGCACAACTAAAGACGAAAGGATaGCATGGTGCCATTAAAAGGATGCTATTCTTATTGCTTTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TGTTHEHQAQLKTKG*HGAIKRMLFLLLLW Trigger: CCACAAAAGCAATAAGAATAGCATCCTTTTAATGGCACCATGCAATCCTTTCGTCTTTAGTTGTGCCTGATGCTCATGTGTCGTGCCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAAGAGACTCATTCCTTATGGCTTCTTGCTCCCAAGGGAGACTCTCTTACATTCTGGCCACTTCAGTaGACGATTCAATTGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: KEETHSLWLLAPKGDSLTFWPLQ*TIQLTE Trigger: TTCTGTCAATTGAATCGTGCACTGAAGTGGCCAGAA...TGTAAGAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAATGAGTCTCTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCAACAACGACAAACCCTTAATTTGAACTTGTCTGGGATACAGCTTCCCTTGATCACAGAAGATTTCTaGCCACTTCAGTGCACGATT | + |
|
Preference number: 2 (lower is better) Translates to: QQQRQTLNLNLSGIQLPLITEDF*PLQCTI Trigger: AATCGTGCACTGAAGTGGCCAGAAATCTTCTGTGAT...CAAGGGAAGCTGTATCCCAGACAAGTTCAAATTAAGGGTTTGTCGTTGTTGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCAGGGTGTGGTGACAAGGAAGTACTTTGTAGTTTTATTATTGCTTGTGAATGAGAGAGGAGGAAGATaGGCTAGAAAGAGATCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: CQGVVTRKYFVVLLLLVNERGGR*ARKRSR Trigger: CCTTGATCTCTTTCTAGCTCATCTTCCTCCTCTCTC...ATTCACAAGCAATAATAAAACTACAAAGTACTTCCTTGTCACCACACCCTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCCAGGGTGTGGTGACAAGGAAGTACTTTGTAGTTTTATTATTGCTTGTGAATCAAGCTATAGTCATCTaGGAGGAGGGACCCTCAATT | + |
|
Preference number: 2 (lower is better) Translates to: CQGVVTRKYFVVLLLLVNQAIVI*EEGPSI Trigger: AATTGAGGGTCCCTCCTCTCAGATGACTATAGCTTG...ATTCACAAGCAATAATAAAACTACAAAGTACTTCCTTGTCACCACACCCTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCAGGGTGTGGTGACAAGGAAGTACTTTGTAGTTTTATTATTGCTTGTGAATATTTTTGCCCTTATGTaGACAGTTCCACAGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CQGVVTRKYFVVLLLLVNIFALM*TVPQAR Trigger: TCTTGCCTGTGGAACTGTCCACATAAGGGCAAAAAT...ATTCACAAGCAATAATAAAACTACAAAGTACTTCCTTGTCACCACACCCTGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | TGTCAGGAGCACATCCAGGGCAGGAGTCCTTGTCTTTaGCTGCCCTGGTGTCCTCCTCCCTCGAAGGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CQEHIQGRSPCL*LPWCPPPSKGA Trigger: GGCACCCTTCGAGGGAGGAGGACACCAGGGCAGTCAAAGACAAGGACTCCTGCCCTGGATGTGCTCCTGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | TGTGAGTGGGGCCACTGCTGGGCTGGTGGTCCTGGATaGGCAAGCCATGGGGAGCAAGTCAGTAAGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: CEWGHCWAGGPG*ASHGEQVSKQH Trigger: ATGCTGCTTACTGACTTGCTCCCCATGGCTTGCTCATCCAGGACCACCAGCCCAGCAGTGGCCCCACTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | TGCCATTGGATGGTGCTGCTCCAGGGATGCTCCTCTTaGTGCCTTCGGGGCAGGCAGTATTGGAAGGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: CHWMVLLQGCSS*CLRGRQYWKGS Trigger: GGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | TTGCATGGGACATCCTGGCCTGCCTATGTTGTGCCCTaGGTCTGTCAGGAGCACATCCAGGGCAGGAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LHGTSWPAYVVP*VCQEHIQGRSP Trigger: AGGACTCCTGCCCTGGATGTGCTCCTGACAGACGCAGGGCACAACATAGGCAGGCCAGGATGTCCCATGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | GCCATGGGGAGCAAGTCAGTAAGCAGCATCCCTCCATaGCCTCTGCATCAGCTCCCTCCTCCAGGTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AMGSKSVSSIPP*PLHQLPPPGSC Trigger: ACAGGAACCTGGAGGAGGGAGCTGATGCAGAGGCCATGGAGGGATGCTGCTTACTGACTTGCTCCCCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTAAGGGATCCCCTGCATTaGTCTCTGCCTTCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LDGAAPGMLLLLPSGQAVRDPLH*SLPSSQ Trigger: CTGGGAAGAAGGCAGAGACAAATGCAGGGGATCCCT...TACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCCCAGGGCAGGAGTCCTaGTCTTTGACTGCCCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSPGQES*SLTALV Trigger: CACCAGGGCAGTCAAAGACAAGGACTCCTGCCCTGG...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | CAGGCAGCGGATGCTGCAAAGACAGAGCAAGCCAAGTaGGAGCAGAACCCTCCCCATACTCACCCTGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: QAADAAKTEQAK*EQNPPHTHPET Trigger: TGTCTCAGGGTGAGTATGGGGAGGGTTCTGCTCTCACTTGGCTTGCTCTGTCTTTGCAGCATCCGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | CTCCTACCAACCCCACTGATTACGGGTTTCACACCTTaGGTGTGGTGGACAGTCACCCTCACTGTCCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLPTPLITGFTP*VWWTVTLTVPT Trigger: AGTGGGGACAGTGAGGGTGACTGTCCACCACACCCAAGGTGTGAAACCCGTAATCAGTGGGGTTGGTAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | GGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTATTaGAAGGGATCCCCTGCATTTGTCTCTGCCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GCSSCCLRGRQY*KGSPAFVSAFF Trigger: GAAGAAGGCAGAGACAAATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCTCCATCGTCACTCTCTaGGAACAGTCCCCACCCACA | + |
|
Preference number: 3 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSSIVTL*EQSPPT Trigger: TGTGGGTGGGGACTGTTCCAAGAGAGTGACGATGGA...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | TGGCCAGCCAGCAAGGCTCAGAGGTCTCCCCGTCTCTaGCTCTCCATCATTAGGTTTATAGATGCATGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: WPASKAQRSPRL*LSIIRFIDACC Trigger: GCAGCATGCATCTATAAACCTAATGATGGAGAGGCAGAGACGGGGAGACCTCTGAGCCTTGCTGGCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | TTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTaGAAAGACAGAGCAAGCCAAGTGAGAGCAGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: FPPSYTNPGSGC*KDRASQVRAEP Trigger: GGGTTCTGCTCTCACTTGGCTTGCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | CCCTCAGCTCTTCCTCTGGGTGCCTACTGGGTATTCTaGCATGGATGTCACCACAAGTATCCCCTTGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: PSALPLGAYWVF*HGCHHKYPLGV Trigger: TACCCCAAGGGGATACTTGTGGTGACATCCATGCCAGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | TTCCCAGCTCCCTCAGCTCTTCCTCTGGGTGCCTACTaGGTATTCTGGCATGGATGTCACCACAAGTATCCC | + |
|
Preference number: 3 (lower is better) Translates to: FPAPSALPLGAY*VFWHGCHHKYP Trigger: GGGATACTTGTGGTGACATCCATGCCAGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGGGAGCTGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAAAGACAGAGCGAGAAGAGGGTTGTGTaGGCTCACAGCTGCAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: AFSTFLHQPRQRMLQRQSEKRVV*AHSCRK Trigger: TTTCCTGCAGCTGTGAGCCAACACAACCCTCTTCTC...GCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTGCCCTGCGTCTGTCAGGAGCACATCCAGGGCAGGAGTCCTTGTCTTTGACATTCCTTATGGCTTCTaGCTCCCAAGGGAGACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LCPASVRSTSRAGVLVFDIPYGF*LPRETL Trigger: GAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAAT...GTCAAAGACAAGGACTCCTGCCCTGGATGTGCTCCTGACAGACGCAGGGCACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | TCTCAGCAAACCTGGAAAATAGCAATTTGGCTAGACTaGCCAGCCAGCAAGGCTCAGAGGTCTCCCCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SQQTWKIAIWLD*PASKAQRSPRL Trigger: GAGACGGGGAGACCTCTGAGCCTTGCTGGCTGGCCAGTCTAGCCAAATTGCTATTTTCCAGGTTTGCTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | ATTGAAGGTATCAGCCCACATCCATCGTCACTCTCTTaGAACAGTCCCCACCCACAACCCTTGCTGAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IEGISPHPSSLS*NSPHPQPLLKG Trigger: CCCCTTCAGCAAGGGTTGTGGGTGGGGACTGTTCCAAGAGAGTGACGATGGATGTGGGCTGATACCTTCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | TACCAACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCTGCAACCCCACCCACAACCCTaGCTGAAGGGGAACAGTATA | + |
|
Preference number: 3 (lower is better) Translates to: YQLAFSTFLHQPRQRMLQPHPQP*LKGNSI Trigger: TATACTGTTCCCCTTCAGCAAGGGTTGTGGGTGGGG...TTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | CTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATaGTGCAAAGACAGAGCAAGCCAAGTGAGAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LFPPSYTNPGSG*CKDRASQVRAE Trigger: TTCTGCTCTCACTTGGCTTGCTCTGTCTTTGCAGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | GTCTATCCTGAGGAAGGCATGGTGGGTGAAACAACTTaGTCCTTAATGTCAGGAGTGAGGGGTGGTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VYPEEGMVGETT*SLMSGVRGGGN Trigger: GTTCCCACCACCCCTCACTCCTGACATTAAGGACCAAGTTGTTTCACCCACCATGCCTTCCTCAGGATAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | CACTCAATAGCCTCCTCCCCAGCCACTGGGGACATGTaGCCCTACCTCACTGTACTGGATAGCTTTATATCA | + |
|
Preference number: 3 (lower is better) Translates to: HSIASSPATGDM*PYLTVLDSFIS Trigger: TGATATAAAGCTATCCAGTACAGTGAGGTAGGGCCACATGTCCCCAGTGGCTGGGGAGGAGGCTATTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCCAGCTCCCTCAGCTCTTCCTCTGGGTGCCTACTGGGTATTCTGGCATGCCAATTTGCGAGGAATaGTTGCTTCTGAAAATAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SSQLPQLFLWVPTGYSGMPICEE*LLLKIG Trigger: CCCTATTTTCAGAAGCAACAATTCCTCGCAAATTGG...CATGCCAGAATACCCAGTAGGCACCCAGAGGAAGAGCTGAGGGAGCTGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTGAGACACCTGGACCACCCAATTCTTATTTCTCTTCTGACTTTCTCAGTTCGGGGCAGGCAGTATaGGAAGGGATCCCCTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: HPETPGPPNSYFSSDFLSSGQAV*EGIPCI Trigger: AATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGA...ACTGAGAAAGTCAGAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | CTCCTCCAGGTTCCTGTCCTGCTTAAGTTTCTGTCCTaGCTTCCTTCAGTGATGGACCAGAGACATGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLQVPVLLKFLS*LPSVMDQRHGG Trigger: ACCTCCATGTCTCTGGTCCATCACTGAAGGAAGTCAGGACAGAAACTTAAGCAGGACAGGAACCTGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | AGCCAAGTGAGAGCAGAACCCTCCCCATACTCACCCTaGGACACCTGGACCACCCAATTCTTATTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SQVRAEPSPYSP*DTWTTQFLFLF Trigger: GAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTGAGTATGGGGAGGGTTCTGCTCTCACTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | CCTGGTCTTCGGAGCTTCGTTGTCAGCCTGATGGAGTaGTGTACCAACTTGCTTTTTCCACCTTCCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: PGLRSFVVSLME*CTNLLFPPSYT Trigger: GGTGTAGGAAGGTGGAAAAAGCAAGTTGGTACATCACTCCATCAGGCTGACAACGAAGCTCCGAAGACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | GGACAAGTCTCTCAGCAAACCTGGAAAATAGCAATTTaGCTAGACTGGCCAGCCAGCAAGGCTCAGAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GQVSQQTWKIAI*LDWPASKAQRS Trigger: AGACCTCTGAGCCTTGCTGGCTGGCCAGTCTAGCCAAATTGCTATTTTCCAGGTTTGCTGAGAGACTTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | AATGAGTGCATCGCAGACACTCAAACACTTGCTCAGTaGACGGGCACGACACATGAGCATCAGGCACAACTA | + |
|
Preference number: 3 (lower is better) Translates to: NECIADTQTLAQ*TGTTHEHQAQL Trigger: TAGTTGTGCCTGATGCTCATGTGTCGTGCCCGTTCACTGAGCAAGTGTTTGAGTGTCTGCGATGCACTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | TGTGAATTCACCAGAGAAAATGACTCCCCTTTGACTTaGATGGGACATCCTGGCCTGCCTATGTTGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CEFTRENDSPLT*MGHPGLPMLCP Trigger: AGGGCACAACATAGGCAGGCCAGGATGTCCCATGCAAGTCAAAGGGGAGTCATTTTCTCTGGTGAATTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | GGGGTGGTGGGAACAAAGTACCTGGTTACAATGTATTaGTGCATTGAGACTTTGAGAGTGCTGGAAGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GVVGTKYLVTMY*CIETLRVLEVG Trigger: CCCCACTTCCAGCACTCTCAAAGTCTCAATGCACCAATACATTGTAACCAGGTACTTTGTTCCCACCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAACAACGACAAACCCTTAATTTGAACTTGTCTGGGATACAGCTTCCCTTGTACGGGTTTCACACCTaGGGTGTGGTGGACAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QQQRQTLNLNLSGIQLPLYGFHT*GVVDSH Trigger: GTGACTGTCCACCACACCCAAGGTGTGAAACCCGTA...CAAGGGAAGCTGTATCCCAGACAAGTTCAAATTAAGGGTTTGTCGTTGTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | CACTCAAACACTTGCTCAGTGAACGGGCACGACACATaGGCATCAGGCACAACTAAAGACGAAAGGATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HSNTCSVNGHDT*ASGTTKDERIA Trigger: TGCAATCCTTTCGTCTTTAGTTGTGCCTGATGCTCATGTGTCGTGCCCGTTCACTGAGCAAGTGTTTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | GTGGTGGGAACAAAGTACCTGGTTACAATGTATTGGTaGATTGAGACTTTGAGAGTGCTGGAAGTGGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VVGTKYLVTMYW*IETLRVLEVGA Trigger: AGCCCCCACTTCCAGCACTCTCAAAGTCTCAATGCACCAATACATTGTAACCAGGTACTTTGTTCCCACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACTCTCTTGGAACAGTCCCCACCCACAACCCTTGCTGAAGGGGAACAGTATCAGTGCACGATTCAATaGACAGAAGAAATATGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VTLLEQSPPTTLAEGEQYQCTIQ*TEEICL Trigger: CAAACATATTTCTTCTGTCAATTGAATCGTGCACTG...ATACTGTTCCCCTTCAGCAAGGGTTGTGGGTGGGGACTGTTCCAAGAGAGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | CAGCCACTGGGGACATGTGGCCCTACCTCACTGTACTaGATAGCTTTATATCAATGTGACACAAGCTATAGT | + |
|
Preference number: 3 (lower is better) Translates to: QPLGTCGPTSLY*IALYQCDTSYS Trigger: ACTATAGCTTGTGTCACATTGATATAAAGCTATCCAGTACAGTGAGGTAGGGCCACATGTCCCCAGTGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGAGACTCATTCCTTATGGCTTCTTGCTCCCAAGGGAGACTCTCTTACAACCCTTAATTTGAACTaGTCTGGGATACAGCTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KEETHSLWLLAPKGDSLTTLNLN*SGIQLP Trigger: GGGAAGCTGTATCCCAGACAAGTTCAAATTAAGGGT...TGTAAGAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAATGAGTCTCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | CTGATCAAGGGTAGAATAGTCTCTCTTCCTTGGATTTaGCAAAACAGAACCAGGAACTCCCCTATGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LIKGRIVSLPWI*QNRTRNSPMNP Trigger: TGGGTTCATAGGGGAGTTCCTGGTTCTGTTTTGGCAAATCCAAGGAAGAGAGACTATTCTACCCTTGATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | AGACTCCTGATCAAGGGTAGAATAGTCTCTCTTCCTTaGATTTGCCAAAACAGAACCAGGAACTCCCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: RLLIKGRIVSLP*ICQNRTRNSPM Trigger: CATAGGGGAGTTCCTGGTTCTGTTTTGGCAAATCCAAGGAAGAGAGACTATTCTACCCTTGATCAGGAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | TGGACTCAGAACAACAGAAAATGCTTAGAAGAGAGGTaGCACACAGAGATAGTCTTCTGTGGGCAATGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WTQNNRKCLEER*HTEIVFCGQCH Trigger: ATGGCATTGCCCACAGAAGACTATCTCTGTGTGTCACCTCTCTTCTAAGCATTTTCTGTTGTTCTGAGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | TCCCCACTAACACACACACACATCACAGAAGATTTCTaGCCACTTCAGTGCACGATTCAATTGACAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPLTHTHITEDF*PLQCTIQLTEE Trigger: TTCTTCTGTCAATTGAATCGTGCACTGAAGTGGCCAGAAATCTTCTGTGATGTGTGTGTGTGTTAGTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGATCAAGGAACCGAGAGTCAATAAAATACTACACAGTATCTTCTACGAATCATGGTGCATTGAGACTTaGAGAGTGCTGGAAGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EIKEPRVNKILHSIFYESWCIET*RVLEVG Trigger: CCCCACTTCCAGCACTCTCAAAGTCTCAATGCACCA...TGATTCGTAGAAGATACTGTGTAGTATTTTATTGACTCTCGGTTCCTTGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | AGTACCTGGTTACAATGTATTGGTGCATTGAGACTTTaGGAGTGCTGGAAGTGGGGGCTAAGATATAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: STWLQCIGALRL*ECWKWGLRYSI Trigger: GATACTATATCTTAGCCCCCACTTCCAGCACTCTCAAAGTCTCAATGCACCAATACATTGTAACCAGGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | GGATGCTATTCTTATTGCTTTTGTGGTAGACCATATTaGAGGTATCAGCCCACATCCATCGTCACTCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GCYSYCFCGRPY*RYQPTSIVTLL Trigger: CAAGAGAGTGACGATGGATGTGGGCTGATACCTTCAATATGGTCTACCACAAAAGCAATAAGAATAGCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTCCTGATCAAGGGTAGAATAGTCTCTCTTCCTTGGATTTGCCAAAACAGACGACAAACCCTTAATTaGAACTTGTCTGGGATACAG | + |
|
Preference number: 3 (lower is better) Translates to: RLLIKGRIVSLPWICQNRRQTLN*NLSGIQ Trigger: CTGTATCCCAGACAAGTTCAAATTAAGGGTTTGTCG...TCTGTTTTGGCAAATCCAAGGAAGAGAGACTATTCTACCCTTGATCAGGAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CCA 72 bp | CTTAGAAGAGAGGTGACACACAGAGATAGTCTTCTGTaGGCAATGCCATCATCACAAATGAGAAGTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LRREVTHRDSLL*AMPSSQMRSFY Trigger: ATAGAAACTTCTCATTTGTGATGATGGCATTGCCCACAGAAGACTATCTCTGTGTGTCACCTCTCTTCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | CAGAAGATTTCTGGCCACTTCAGTGCACGATTCAATTaGCAGAAGAAATATGTTTGTGTCGAGAATGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QKISGHFSARFN*QKKYVCVENDE Trigger: CTCATCATTCTCGACACAAACATATTTCTTCTGTCAATTGAATCGTGCACTGAAGTGGCCAGAAATCTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR TCA 72 bp | ACGAAGCCTTCAAACATATCTGACCACCACACTGAGTaGCAAAATCAAAATTTAAAGGTATTTGGCGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TKPSNISDHHTE*QNQNLKVFGVC Trigger: GCAGACGCCAAATACCTTTAAATTTTGATTTTGTCACTCAGTGTGGTGGTCAGATATGTTTGAAGGCTTCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| 3UTR GCA 72 bp | CACACACACATCACAGAAGATTTCTGGCCACTTCAGTaGACGATTCAATTGACAGAAGAAATATGTTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HTHITEDFWPLQ*TIQLTEEICLC Trigger: ACACAAACATATTTCTTCTGTCAATTGAATCGTGCACTGAAGTGGCCAGAAATCTTCTGTGATGTGTGTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | GACTGCCCTGGTGTCCTCCTCCCTCGAAGGGTGCCATaGGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DCPGVLLPRRVP*DGAAPGMLLLL Trigger: CAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCACCCTTCGAGGGAGGAGGACACCAGGGCAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | CTGTCAGGAGCACATCCAGGGCAGGAGTCCTTGTCTTaGACTGCCCTGGTGTCCTCCTCCCTCGAAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSGAHPGQESLS*TALVSSSLEGC Trigger: GCACCCTTCGAGGGAGGAGGACACCAGGGCAGTCAAAGACAAGGACTCCTGCCCTGGATGTGCTCCTGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | GTGCCATTGGATGGTGCTGCTCCAGGGATGCTCCTCTaGCTGCCTTCGGGGCAGGCAGTATTGGAAGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VPLDGAAPGMLL*LPSGQAVLEGI Trigger: GATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAATGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | CTGCGTCTGTCAGGAGCACATCCAGGGCAGGAGTCCTaGTCTTTGACTGCCCTGGTGTCCTCCTCCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLSGAHPGQES*SLTALVSSSLE Trigger: TTCGAGGGAGGAGGACACCAGGGCAGTCAAAGACAAGGACTCCTGCCCTGGATGTGCTCCTGACAGACGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | CCTTTGACTTGCATGGGACATCCTGGCCTGCCTATGTaGTGCCCTGCGTCTGTCAGGAGCACATCCAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLTCMGHPGLPM*CPASVRSTSRA Trigger: TGCCCTGGATGTGCTCCTGACAGACGCAGGGCACAACATAGGCAGGCCAGGATGTCCCATGCAAGTCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR TCA 90 bp | GGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTATTAAGCTCCCAGATCTCTaGGAAGCCCAGGAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWCCSRDAPLAAFGAGSIKLPDL*EAQEDK Trigger: TTTGTCTTCCTGGGCTTCTCAGAGATCTGGGAGCTT...AATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | GGGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTATaGGAAGGGATCCCCTGCATTTGTCTCTGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMLLLLPSGQAV*EGIPCICLCLL Trigger: AAGAAGGCAGAGACAAATGCAGGGGATCCCTTCCAATACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | AGGAGAGGATGTGGGGATTGCAAGCCAGCCTGCGTTTaGCTCTCCGGGTGGTATTCTCTGGTCTCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGCGDCKPACV*LSGWYSLVSLS Trigger: ACTCAGAGAGACCAGAGAATACCACCCGGAGAGCAAAACGCAGGCTGGCTTGCAATCCCCACATCCTCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR TCA 90 bp | TTGGATGGTGCTGCTCCAGGGATGCTCCTCTTGCTGCCTTCGGGGCAGGCAGTAAGTACTACACAGTGTTaGGTGTTCATGATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LDGAAPGMLLLLPSGQAVSTTQC*VFMMVT Trigger: TGTCACCATCATGAACACTCAACACTGTGTAGTACT...TACTGCCTGCCCCGAAGGCAGCAAGAGGAGCATCCCTGGAGCAGCACCATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR GCA 90 bp | GTACCAACTTGCTTTTTCCACCTTCCTACACCAACCCAGGCAGCGGATGCCATAGAAGAAGAAGACCTGTaGCATGCAGCCTCGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VPTCFFHLPTPTQAADAIEEEDL*HAASVG Trigger: TCCTACCGAGGCTGCATGGCACAGGTCTTCTTCTTC...TATGGCATCCGCTGCCTGGGTTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213672.2 |
||
| 3UTR CAA 72 bp | AGGACAAGTCTCTCAGCAAACCTGGAAAATAGCAATTaGGCTAGACTGGCCAGCCAGCAAGGCTCAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTSLSANLENSN*ARLASQQGSEV Trigger: GACCTCTGAGCCTTGCTGGCTGGCCAGTCTAGCCAAATTGCTATTTTCCAGGTTTGCTGAGAGACTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR TCA 90 bp | GCGTCTGCTGAGAGGCATGGAGTGGTGTTTAGCCTAATACATAAAGTCACCCCAAAGCTCCCAGATCTCTaGGAAGCCCAGGAAGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASAERHGVVFSLIHKVTPKLPDL*EAQEDK Trigger: TTTGTCTTCCTGGGCTTCTCAGAGATCTGGGAGCTT...TGGGGTGACTTTATGTATTAGGCTAAACACCACTCCATGCCTCTCAGCAGACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR CCA 90 bp | TGTCAGCCTGATGGAGTGATGTACCAACTTGCTTTTTCCACCTTCCTACACCAAACAGGAAGAAGACCATaGCCCCTCCCAGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CQPDGVMYQLAFSTFLHQTGRRP*PLPGSG Trigger: TCCACTTCCTGGGAGGGGCCATGGTCTTCTTCCTGT...TTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTACATCACTCCATCAGGCTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTGAGACACCTGGACCACCCAATTCTTATTTCTCTTCTGACTTTCTCAGTGAAGAAGAAGACCTGTaGCATGCAGCCTCGGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPETPGPPNSYFSSDFLSEEEDL*HAASVG Trigger: TCCTACCGAGGCTGCATGGCACAGGTCTTCTTCTTC...ACTGAGAAAGTCAGAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR CCA 90 bp | CACACACACATCACAGAAGATTTCTGGCCACTTCAGTGCACGATTCAATTGACAACAGGAAGAAGACCATaGCCCCTCCCAGGAAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHITEDFWPLQCTIQLTTGRRP*PLPGSG Trigger: TCCACTTCCTGGGAGGGGCCATGGTCTTCTTCCTGT...TGTCAATTGAATCGTGCACTGAAGTGGCCAGAAATCTTCTGTGATGTGTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR GCA 90 bp | TGTCAGCCTGATGGAGTGATGTACCAACTTGCTTTTTCCACCTTCCTACACCAATTCCCACCACGGTCGTaGTGTAGACACACAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: CQPDGVMYQLAFSTFLHQFPPRS*CRHTRT Trigger: TGTTCTTGTGTGTCTACAGCACGACCGTGGTGGGAA...TTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTACATCACTCCATCAGGCTGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR GCA 90 bp | CACCCTGAGACACCTGGACCACCCAATTCTTATTTCTCTTCTGACTTTCTCAGTTTCCCACCACGGTCGTaGTGTAGACACACAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: HPETPGPPNSYFSSDFLSFPPRS*CRHTRT Trigger: TGTTCTTGTGTGTCTACAGCACGACCGTGGTGGGAA...ACTGAGAAAGTCAGAAGAGAAATAAGAATTGGGTGGTCCAGGTGTCTCAGGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTTAGCCTAATACATAAAGTCACCCCACAACCTTTCAGAGATAATCCCAGCGTGGCTGATGGATACTaGCTTGTCCATGGTGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VFSLIHKVTPQPFRDNPSVADGY*LVHGEG Trigger: CCCTTCACCATGGACAAGGCAGTATCCATCAGCCAC...GCTGGGATTATCTCTGAAAGGTTGTGGGGTGACTTTATGTATTAGGCTAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTAATACATAAAGTCACCCCACAACCTTTCAGAGATAATCCCAGCTCTGTGAGTACTACACAGTGTTaGGTGTTCATGATGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SLIHKVTPQPFRDNPSSVSTTQC*VFMMVT Trigger: TGTCACCATCATGAACACTCAACACTGTGTAGTACT...CACAGAGCTGGGATTATCTCTGAAAGGTTGTGGGGTGACTTTATGTATTAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | ATTAGGTTTATAGATGCATGCTGCCATACCAGGCTTTaGTACAAGGGTTATAGGGTTGAACTCGATTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IRFIDACCHTRL*YKGYRVELDSL Trigger: CAAAGAATCGAGTTCAACCCTATAACCCTTGTACAAAAGCCTGGTATGGCAGCATGCATCTATAAACCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | ACACATGAGCATCAGGCACAACTAAAGACGAAAGGATaGCATGGTGCCATTAAAAGGATGCTATTCTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: THEHQAQLKTKG*HGAIKRMLFLL Trigger: CAATAAGAATAGCATCCTTTTAATGGCACCATGCAATCCTTTCGTCTTTAGTTGTGCCTGATGCTCATGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | AAATGTATGAAAGTGAATGATGGGGGAAACGAATTGTaGACTAAGTTAATGGGCATTCTGATCCAATTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KCMKVNDGGNEL*TKLMGILIQFA Trigger: CGCAAATTGGATCAGAATGCCCATTAACTTAGTCAACAATTCGTTTCCCCCATCATTCACTTTCATACATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| 3UTR CAA 72 bp | TTCAAATGTATGAAAGTGAATGATGGGGGAAACGAATaGTTGACTAAGTTAATGGGCATTCTGATCCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FKCMKVNDGGNE*LTKLMGILIQF Trigger: AAATTGGATCAGAATGCCCATTAACTTAGTCAACAATTCGTTTCCCCCATCATTCACTTTCATACATTTGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR CAA 90 bp | GCGTCTGCTGAGAGGCATGGAGTGGTGTTTAGCCTAATACATAAAGTCACCCCACTGATGGATACTGCCTaGTCCATGGTGAAGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASAERHGVVFSLIHKVTPLMDTA*SMVKGV Trigger: CACCCCCTTCACCATGGACAAGGCAGTATCCATCAG...TGGGGTGACTTTATGTATTAGGCTAAACACCACTCCATGCCTCTCAGCAGACGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS CCA 90 bp | CCACAGAATGGCAACGGGAGCATCAGAGACAGCTGGACAATCGAGTaGACAAATCCCACAATCCATGCAGTTACCACCAGTACTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: PQNGNGSIRDSWTIE*TNPTIHAVTTSTTQ Trigger: CTGTGTAGTACTGGTGGTAACTGCATGGATTGTGGGATTTGTCCACTCGATTGTCCAGCTGTCTCTGATGCTCCCGTTGCCATTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049743.2 ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTGATCAAGGGTAGAATAGTCTCTCTTCCTTGGATTTGCCAAAACAGACTGATGGATACTGCCTaGTCCATGGTGAAGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLLIKGRIVSLPWICQNRLMDTA*SMVKGV Trigger: CACCCCCTTCACCATGGACAAGGCAGTATCCATCAG...TCTGTTTTGGCAAATCCAAGGAAGAGAGACTATTCTACCCTTGATCAGGAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS-3UTR CAA 90 bp | TGTCAGCCTGATGGAGTGATGTACCAACTTGCTTTTTCCACCTTCCTACACCAACAGTACTACACAGTGTaGAGTGTTCATGATGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CQPDGVMYQLAFSTFLHQQYYTV*SVHDGD Trigger: GTCACCATCATGAACACTCAACACTGTGTAGTACTG...TTGGTGTAGGAAGGTGGAAAAAGCAAGTTGGTACATCACTCCATCAGGCTGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213672.2 ENSMUST00000213928.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGAGACTCATTCCTTATGGCTTCTTGCTCCCAAGGGAGACTCTCTTACACAGTACTACACAGTGTaGAGTGTTCATGATGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KEETHSLWLLAPKGDSLTQYYTV*SVHDGD Trigger: GTCACCATCATGAACACTCAACACTGTGTAGTACTG...TGTAAGAGAGTCTCCCTTGGGAGCAAGAAGCCATAAGGAATGAGTCTCTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213928.2 |
||
| CDS CCA 72 bp | GGCAACGGGAGCATCAGAGACAGCTGGACAATCGAGTaGACAAATCCCACAATCCATGCAGTTACCACCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GNGSIRDSWTIE*TNPTIHAVTTS Trigger: ACTGGTGGTAACTGCATGGATTGTGGGATTTGTCCACTCGATTGTCCAGCTGTCTCTGATGCTCCCGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049743.2 ENSMUST00000213672.2 ENSMUST00000213928.2 |
||