Pregenerated sensors for OLFR461 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068259Ensembl transcript IDs: ENSMUST00000089490.3, ENSMUST00000215009.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACACATTCTTTGCCACCCTCTAGGAAATTTCACAGATTTAAGATaGACCTGGAGAAACCCTGGCCTGAGACTGCTGAAGGGCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: PHILCHPLGNFTDLR*TWRNPGLRLLKGQG Trigger: ACCCTGGCCCTTCAGCAGTCTCAGGCCAGGGTTTCTCCAGGTGCATCTTAAATCTGTGAAATTTCCTAGAGGGTGGCAAAGAATGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 90 bp | CTTCAGATTTCTGGAGAACAGCTTCAGAGGCCTGGGATGATGTTGTaGGTGGCATCACAACCTGCCTCATTCCCACACATTCTTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: LQISGEQLQRPGMML*VASQPASFPHILCH Trigger: GTGGCAAAGAATGTGTGGGAATGAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CCA 90 bp | ATTCTTTGCCACCCTCTAGGAAATTTCACAGATTTAAGATGCACCTaGAGAAACCCTGGCCTGAGACTGCTGAAGGGCCAGGGTTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: ILCHPLGNFTDLRCT*RNPGLRLLKGQGCR Trigger: TCTACAACCCTGGCCCTTCAGCAGTCTCAGGCCAGGGTTTCTCCAGGTGCATCTTAAATCTGTGAAATTTCCTAGAGGGTGGCAAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CCA 90 bp | CCATGTTACTTAACTTCAGATTTCTGGAGAACAGCTTCAGAGGCCTaGGATGATGTTGTGAGTGGCATCACAACCTGCCTCATTCCCACA | + |
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Preference number: 1 (lower is better) Translates to: PCYLTSDFWRTASEA*DDVVSGITTCLIPT Trigger: TGTGGGAATGAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAAGTTAAGTAACATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CCA 90 bp | GACTCAGCCAGACAAGTTCTGCCATGTTACTTAACTTCAGATTTCTaGAGAACAGCTTCAGAGGCCTGGGATGATGTTGTGAGTGGCATC | + |
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Preference number: 1 (lower is better) Translates to: DSARQVLPCYLTSDF*RTASEAWDDVVSGI Trigger: GATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAAGTTAAGTAACATGGCAGAACTTGTCTGGCTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 90 bp | TTACTTAACTTCAGATTTCTGGAGAACAGCTTCAGAGGCCTGGGATaGTGTTGTGAGTGGCATCACAACCTGCCTCATTCCCACACATTC | + |
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Preference number: 1 (lower is better) Translates to: LLNFRFLENSFRGLG*CCEWHHNLPHSHTF Trigger: GAATGTGTGGGAATGAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAAGTTAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 90 bp | TATCTCCACTGGTACAATGAGAATAATAGAACACCAAGCCACTCTTaGCATCGTCAAGCAGGATGTTTTGGTTTTTGTTGTGTCAGTGAA | + |
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Preference number: 1 (lower is better) Translates to: YLHWYNENNRTPSHS*HRQAGCFGFCCVSE Trigger: TTCACTGACACAACAAAAACCAAAACATCCTGCTTGACGATGTCAAGAGTGGCTTGGTGTTCTATTATTCTCATTGTACCAGTGGAGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR CCA 90 bp | CCACTTCTTCCCCAGTCTTCTCTGGGAGGACTCAGCCAGACAAGTTCTGCCATGCACCTGGAGAAACCCTaGCCTGAGACTGCTGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PLLPQSSLGGLSQTSSAMHLEKP*PETAEG Trigger: CCCTTCAGCAGTCTCAGGCCAGGGTTTCTCCAGGTG...CATGGCAGAACTTGTCTGGCTGAGTCCTCCCAGAGAAGACTGGGGAAGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR GCA 90 bp | CCACTTCTTCCCCAGTCTTCTCTGGGAGGACTCAGCCAGACAAGTTCTGCCATGTTCCCACACATTCTTTaGCACCCTCTAGGAAATTTC | + |
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Preference number: 2 (lower is better) Translates to: PLLPQSSLGGLSQTSSAMFPHIL*HPLGNF Trigger: GAAATTTCCTAGAGGGTGGCAAAGAATGTGTGGGAA...CATGGCAGAACTTGTCTGGCTGAGTCCTCCCAGAGAAGACTGGGGAAGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CAA 90 bp | TCAGACATTAGGGGAGCGTGGAGGATGACAGACAGCTTGGTAAACTaGATCCTGGTAAAGGAAGAGAGAAGGCAGAGGAATGCACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SDIRGAWRMTDSLVN*ILVKEERRQRNAQV Trigger: CACTTGTGCATTCCTCTGCCTTCTCTCTTCCTTTACCAGGATCAAGTTTACCAAGCTGTCTGTCATCCTCCACGCTCCCCTAATGTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR GCA 90 bp | TCACTCTTCTCTGCATCCCATTCTAATCATCATTTCCCAGGAGAGCTAGTTGTGAGTGGCATCACAACCTaGCTCATTCCCACACATTCT | + |
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Preference number: 2 (lower is better) Translates to: SLFSASHSNHHFPGELVVSGITT*LIPTHS Trigger: AGAATGTGTGGGAATGAGGCAGGTTGTGATGCCACT...CACAACTAGCTCTCCTGGGAAATGATGATTAGAATGGGATGCAGAGAAGAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTACTACCAGTAGAAAAGTTCCCAGTGAGGTGCTGTCACTCGTGAGACCCCAGAATGGTTTGAATTaGTTGTTGTTTTCAGATTGC | + |
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Preference number: 2 (lower is better) Translates to: LLTTSRKVPSEVLSLVRPQNGLN*LLFSDC Trigger: GCAATCTGAAAACAACAAGCAATTCAAACCATTCTG...GGGTCTCACGAGTGACAGCACCTCACTGGGAACTTTTCTACTGGTAGTAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR CCA 90 bp | TCACTCTTCTCTGCATCCCATTCTAATCATCATTTCCCAGGAGAGCTAGTTGTGTTAACTTCAGATTTCTaGAGAACAGCTTCAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SLFSASHSNHHFPGELVVLTSDF*RTASEA Trigger: GGCCTCTGAAGCTGTTCTCCAGAAATCTGAAGTTAA...CACAACTAGCTCTCCTGGGAAATGATGATTAGAATGGGATGCAGAGAAGAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR CCA 90 bp | AACACCAAGCCACTCTTGACATCGTCAAGCAGGATGTTTTGGTTTTTGTTGTGTCCACTCAGTTGCAAATaGCAGCTACTCAGAATATTA | + |
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Preference number: 2 (lower is better) Translates to: NTKPLLTSSSRMFWFLLCPLSCK*QLLRIL Trigger: TAATATTCTGAGTAGCTGCCATTTGCAACTGAGTGG...ACACAACAAAAACCAAAACATCCTGCTTGACGATGTCAAGAGTGGCTTGGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR GCA 90 bp | TATCTCTGTGCTTACAAAATTAGCAAAGCCATCTGCACAAGCAAAATCCATCTCGAGAAGGCAGAGGAATaGACAAGTGAACATGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: YLCAYKISKAICTSKIHLEKAEE*TSEHGN Trigger: ATTTCCATGTTCACTTGTGCATTCCTCTGCCTTCTC...GAGATGGATTTTGCTTGTGCAGATGGCTTTGCTAATTTTGTAAGCACAGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR TCA 90 bp | TATCTCTGTGCTTACAAAATTAGCAAAGCCATCTGCACAAGCAAAATCCATCTCAAGATGCATAAATACTaGGAAAGTGTAACAGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: YLCAYKISKAICTSKIHLKMHKY*ESVTGA Trigger: TGCTCCTGTTACACTTTCTCAGTATTTATGCATCTT...GAGATGGATTTTGCTTGTGCAGATGGCTTTGCTAATTTTGTAAGCACAGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR GCA 72 bp | GAGGCCTGGGATGATGTTGTGAGTGGCATCACAACCTaGCTCATTCCCACACATTCTTTGCCACCCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: EAWDDVVSGITT*LIPTHSLPPSR Trigger: CCTAGAGGGTGGCAAAGAATGTGTGGGAATGAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 72 bp | CCAGTAGAAAAGTTCCCAGTGAGGTGCTGTCACTCGTaGGACCCTGGAGGCATGACCTGTAAGATGGTTGAA | + |
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Preference number: 3 (lower is better) Translates to: PVEKFPVRCCHS*DPGGMTCKMVE Trigger: TTCAACCATCTTACAGGTCATGCCTCCAGGGTCTCACGAGTGACAGCACCTCACTGGGAACTTTTCTACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 72 bp | TCTGGAGAACAGCTTCAGAGGCCTGGGATGATGTTGTaGGTGGCATCACAACCTGCCTCATTCCCACACATT | + |
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Preference number: 3 (lower is better) Translates to: SGEQLQRPGMML*VASQPASFPHI Trigger: AATGTGTGGGAATGAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CCA 72 bp | AGCAAGAGCTGGACTGAGTCAGACATTAGGGGAGCGTaGAGGATGACAGACAGCTTGGTAAACTTGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SKSWTESDIRGA*RMTDSLVNLIL Trigger: CAGGATCAAGTTTACCAAGCTGTCTGTCATCCTCCACGCTCCCCTAATGTCTGACTCAGTCCAGCTCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 72 bp | TTCAGATTTCTGGAGAACAGCTTCAGAGGCCTGGGATaGTGTTGTGAGTGGCATCACAACCTGCCTCATTCC | + |
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Preference number: 3 (lower is better) Translates to: FRFLENSFRGLG*CCEWHHNLPHS Trigger: GGAATGAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR GCA 72 bp | CTTTGCCACCCTCTAGGAAATTTCACAGATTTAAGATaGACCTGGAGAAACCCTGGCCTGAGACTGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: LCHPLGNFTDLR*TWRNPGLRLLK Trigger: CTTCAGCAGTCTCAGGCCAGGGTTTCTCCAGGTGCATCTTAAATCTGTGAAATTTCCTAGAGGGTGGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CCA 72 bp | TTAACTTCAGATTTCTGGAGAACAGCTTCAGAGGCCTaGGATGATGTTGTGAGTGGCATCACAACCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LTSDFWRTASEA*DDVVSGITTCL Trigger: GAGGCAGGTTGTGATGCCACTCACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CCA 72 bp | AGACAAGTTCTGCCATGTTACTTAACTTCAGATTTCTaGAGAACAGCTTCAGAGGCCTGGGATGATGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: RQVLPCYLTSDF*RTASEAWDDVV Trigger: CACAACATCATCCCAGGCCTCTGAAGCTGTTCTCCAGAAATCTGAAGTTAAGTAACATGGCAGAACTTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR CAA 90 bp | AACACCAAGCCACTCTTGACATCGTCAAGCAGGATGTTTTGGTTTTTGTTGTGTATTCCCACACATTCTTaGCCACCCTCTAGGAAATTT | + |
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Preference number: 3 (lower is better) Translates to: NTKPLLTSSSRMFWFLLCIPTHS*PPSRKF Trigger: AAATTTCCTAGAGGGTGGCAAAGAATGTGTGGGAAT...ACACAACAAAAACCAAAACATCCTGCTTGACGATGTCAAGAGTGGCTTGGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAGTCCCAAAAGAATGTTTATCTCTGTGCTTACAAAATTAGCAAAGCCATCTGTCAAGCAGGATGTTTaGGTTTTTGTTGTGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: QSPKRMFISVLTKLAKPSVKQDV*VFVVSV Trigger: CACTGACACAACAAAAACCAAAACATCCTGCTTGAC...AGATGGCTTTGCTAATTTTGTAAGCACAGAGATAAACATTCTTTTGGGACTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR TCA 72 bp | CCAGTTAGTTTTATAGACCAAATTGTCCAAACTCAATaGAGATCTTTAGCCAAGATATCTCCACTGGTACAA | + |
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Preference number: 3 (lower is better) Translates to: PVSFIDQIVQTQ*RSLAKISPLVQ Trigger: TTGTACCAGTGGAGATATCTTGGCTAAAGATCTTCATTGAGTTTGGACAATTTGGTCTATAAAACTAACTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR GCA 72 bp | GAAATACAAAAGCAAGCCAGATTGATCAAAGTTATCTaGAACATACATATGATGGTTGCACAAAGTCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: EIQKQARLIKVI*NIHMMVAQSPK Trigger: TTTGGGACTTTGTGCAACCATCATATGTATGTTGCAGATAACTTTGATCAATCTGGCTTGCTTTTGTATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR GCA 72 bp | GGTTACAGCTTAATGATACAGCACTTGTTTAATATGTaGATTAGCATAGATTCAATGCCCAAGACCATAAAA | + |
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Preference number: 3 (lower is better) Translates to: GYSLMIQHLFNM*ISIDSMPKTIK Trigger: TTTTATGGTCTTGGGCATTGAATCTATGCTAATGCACATATTAAACAAGTGCTGTATCATTAAGCTGTAACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR CCA 90 bp | CCACTTCTTCCCCAGTCTTCTCTGGGAGGACTCAGCCAGACAAGTTCTGCCATGCTGCCTGTGTCTGCTTaGGTTTCACATAGAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: PLLPQSSLGGLSQTSSAMLPVSA*VSHRGT Trigger: TGTTCCTCTATGTGAAACCCAAGCAGACACAGGCAG...CATGGCAGAACTTGTCTGGCTGAGTCCTCCCAGAGAAGACTGGGGAAGAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR TCA 90 bp | CCACTTCTTCCCCAGTCTTCTCTGGGAGGACTCAGCCAGACAAGTTCTGCCATGACAGAATCAACTCTGTaGAAAGGGTGTTTTCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PLLPQSSLGGLSQTSSAMTESTL*KGCFHR Trigger: CCTGTGAAAACACCCTTTTCACAGAGTTGATTCTGT...CATGGCAGAACTTGTCTGGCTGAGTCCTCCCAGAGAAGACTGGGGAAGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CAA 72 bp | AGGGGAGCGTGGAGGATGACAGACAGCTTGGTAAACTaGATCCTGGTAAAGGAAGAGAGAAGGCAGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: RGAWRMTDSLVN*ILVKEERRQRN Trigger: ATTCCTCTGCCTTCTCTCTTCCTTTACCAGGATCAAGTTTACCAAGCTGTCTGTCATCCTCCACGCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR GCA 90 bp | TTTATCTCTGTGCTTACAAAATTAGCAAAGCCATCTGCACAAGCAAAATCCATCCACCCTGTTGTACTCTaGTGCCTGTGTCTGCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FISVLTKLAKPSAQAKSIHPVVL*CLCLLG Trigger: CCCAAGCAGACACAGGCAGCAGAGTACAACAGGGTG...GATGGATTTTGCTTGTGCAGATGGCTTTGCTAATTTTGTAAGCACAGAGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR TCA 90 bp | TATCTCTGTGCTTACAAAATTAGCAAAGCCATCTGCACAAGCAAAATCCATCTCGAATCCAACTACCCATaGCACTGTTACCATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: YLCAYKISKAICTSKIHLESNYP*HCYHPG Trigger: ACCTGGATGGTAACAGTGTCATGGGTAGTTGGATTC...GAGATGGATTTTGCTTGTGCAGATGGCTTTGCTAATTTTGTAAGCACAGAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR GCA 90 bp | CATACATATGATGGTTGCACAAAGTCCCAAAAGAATGTTTATCTCTGTGCTTACCCTGTTGTACTCTGCTaGCTGTGTCTGCTTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: HTYDGCTKSQKNVYLCAYPVVLC*LCLLGF Trigger: AAACCCAAGCAGACACAGGCAGCAGAGTACAACAGG...GTAAGCACAGAGATAAACATTCTTTTGGGACTTTGTGCAACCATCATATGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR CCA 90 bp | AACACCAAGCCACTCTTGACATCGTCAAGCAGGATGTTTTGGTTTTTGTTGTGTAGACGTTTGTCAGCATaGACTACTATGATGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: NTKPLLTSSSRMFWFLLCRRLSA*TTMMMS Trigger: GCTCATCATCATAGTAGTCCATGCTGACAAACGTCT...ACACAACAAAAACCAAAACATCCTGCTTGACGATGTCAAGAGTGGCTTGGTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| 3UTR CAA 72 bp | CACCAAGCCACTCTTGACATCGTCAAGCAGGATGTTTaGGTTTTTGTTGTGTCAGTGAATTGGACATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HQATLDIVKQDV*VFVVSVNWTFS Trigger: TGAAAATGTCCAATTCACTGACACAACAAAAACCAAAACATCCTGCTTGACGATGTCAAGAGTGGCTTGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR TCA 90 bp | AGCTTAATGATACAGCACTTGTTTAATATGTGCATTAGCATAGATTCAATGCCCTCCCAAGACCGTCACTaGGTACAAAAGAAGGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: SLMIQHLFNMCISIDSMPSQDRH*VQKKEG Trigger: ACCTTCCTTCTTTTGTACTCAGTGACGGTCTTGGGA...GGGCATTGAATCTATGCTAATGCACATATTAAACAAGTGCTGTATCATTAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR GCA 90 bp | AATTGTCCAAACTCAATGAAGATCTTTAGCCAAGATATCTCCACTGGTACAATGGGTGTAGTTCTTTGGTaGCAGGAAAACCTAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: NCPNSMKIFSQDISTGTMGVVLW*QENLTE Trigger: TTCTGTTAGGTTTTCCTGGCACCAAAGAACTACACC...CATTGTACCAGTGGAGATATCTTGGCTAAAGATCTTCATTGAGTTTGGACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR CCA 90 bp | AGCTTAATGATACAGCACTTGTTTAATATGTGCATTAGCATAGATTCAATGCCCTGTGGTGTAGTTCTTTaGTGCCAGGAAAACCTAACA | + |
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Preference number: 4 (lower is better) Translates to: SLMIQHLFNMCISIDSMPCGVVL*CQENLT Trigger: TGTTAGGTTTTCCTGGCACCAAAGAACTACACCACA...GGGCATTGAATCTATGCTAATGCACATATTAAACAAGTGCTGTATCATTAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR CCA 90 bp | TATCTCTGTGCTTACAAAATTAGCAAAGCCATCTGCACAAGCAAAATCCATCTCAAATGTGGCATAGACTaGCCATATTTGAAAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: YLCAYKISKAICTSKIHLKCGID*PYLKEE Trigger: TTCCTCTTTCAAATATGGCCAGTCTATGCCACATTT...GAGATGGATTTTGCTTGTGCAGATGGCTTTGCTAATTTTGTAAGCACAGAGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS-3UTR CAA 90 bp | CAAAGTCCCAAAAGAATGTTTATCTCTGTGCTTACAAAATTAGCAAAGCCATCTAAGGCCTCTATGAATTaGTCATTTCGAAGAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QSPKRMFISVLTKLAKPSKASMN*SFRRVK Trigger: CTTCACTCTTCGAAATGACAAATTCATAGAGGCCTT...AGATGGCTTTGCTAATTTTGTAAGCACAGAGATAAACATTCTTTTGGGACTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215009.3 |
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| CDS TCA 72 bp | GACTGGCCATATTTGAAAGAGGAATCCAACTACCCATaGCACTGTTACCATCCAGGTACAAGTATAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DWPYLKEESNYP*HCYHPGTSIAA Trigger: AGCAGCTATACTTGTACCTGGATGGTAACAGTGTCATGGGTAGTTGGATTCCTCTTTCAAATATGGCCAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089490.3 ENSMUST00000215009.3 |
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