Pregenerated sensors for OLFR460 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045514Ensembl transcript IDs: ENSMUST00000051540.5, ENSMUST00000216942.2
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCCCAGAGAGGAACAGAGGCGGCCTCCTCTTCAGCCCTGTGTACTaGGTCCCTCAGCCCAGGGTGATGGGAAGCCCAGCCCTCTTCTCA | + |
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Preference number: 1 (lower is better) Translates to: IPERNRGGLLFSPVY*VPQPRVMGSPALFS Trigger: TGAGAAGAGGGCTGGGCTTCCCATCACCCTGGGCTGAGGGACGCAGTACACAGGGCTGAAGAGGAGGCCGCCTCTGTTCCTCTCTGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR TCA 90 bp | GCGGCCTCCTCTTCAGCCCTGTGTACTGCGTCCCTCAGCCCAGGGTaGTGGGAAGCCCAGCCCTCTTCTCATTCTATCTTCATCACCCAA | + |
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Preference number: 1 (lower is better) Translates to: AASSSALCTASLSPG*WEAQPSSHSIFITQ Trigger: TTGGGTGATGAAGATAGAATGAGAAGAGGGCTGGGCTTCCCATCACCCTGGGCTGAGGGACGCAGTACACAGGGCTGAAGAGGAGGCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 90 bp | GCTTCTGGGAAAGGAAAGATTGATTTTCTTCAATGGAGTGACACTTaGTGTATCAACCACACTCCACAGCAGGCACCAAGCTCAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: ASGKGKIDFLQWSDT*CINHTPQQAPSSGV Trigger: CACTCCTGAGCTTGGTGCCTGCTGTGGAGTGTGGTTGATACACCAAGTGTCACTCCATTGAAGAAAATCAATCTTTCCTTTCCCAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 90 bp | CGTCTGTTTCCTTTTCTCTCTGCTCTGGACCCATCCAGATACCTTTaGATATATTCATATTCTCTCTCCCTCTCCCTCTCCCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: RLFPFLSALDPSRYL*IYSYSLSLSLSLSL Trigger: GAGAGAGAGGGAGAGGGAGAGGGAGAGAGAATATGAATATATCCAAAGGTATCTGGATGGGTCCAGAGCAGAGAGAAAAGGAAACAGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR GCA 90 bp | AAGGTGCACAGTACCAAGTCTTTTCTTCCTTCATGCCCACTTCACTaGCATAATTTCAGGACAACTACTTACCCCTTCCCTCTTATGTTG | + |
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Preference number: 1 (lower is better) Translates to: KVHSTKSFLPSCPLH*HNFRTTTYPFPLML Trigger: CAACATAAGAGGGAAGGGGTAAGTAGTTGTCCTGAAATTATGGCAGTGAAGTGGGCATGAAGGAAGAAAAGACTTGGTACTGTGCACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 90 bp | TTGCAACTGATAGCTTCTGGGAAAGGAAAGATTGATTTTCTTCAATaGAGTGACACTTGGTGTATCAACCACACTCCACAGCAGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: LQLIASGKGKIDFLQ*SDTWCINHTPQQAP Trigger: TGGTGCCTGCTGTGGAGTGTGGTTGATACACCAAGTGTCACTCCATTGAAGAAAATCAATCTTTCCTTTCCCAGAAGCTATCAGTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR TCA 90 bp | ACTGTGGCAGGATGCAGAAGACCTATACAAATTCAAACCAGAATATaGAATCCCAGCACAAAGTCAAGGGAAGGGAACACAAAATCCCAC | + |
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Preference number: 1 (lower is better) Translates to: TVAGCRRPIQIQTRI*NPSTKSREGNTKSH Trigger: GTGGGATTTTGTGTTCCCTTCCCTTGACTTTGTGCTGGGATTTCATATTCTGGTTTGAATTTGTATAGGTCTTCTGCATCCTGCCACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 90 bp | CACAGATTATTTGATAATGATGGTGATTGTGGTGTACCTCGGAGATaGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: HRLFDNDGDCGVPRR*SSQIIPGFVTCVLA Trigger: GGCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTACACCACAATCACCATCATTATCAAATAATCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 90 bp | CCCATAAAGAAAAACAGGACAGATACACAGATGAACTCAGGACTGTaGCAGGATGCAGAAGACCTATACAAATTCAAACCAGAATATGAA | + |
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Preference number: 1 (lower is better) Translates to: PIKKNRTDTQMNSGL*QDAEDLYKFKPEYE Trigger: TTCATATTCTGGTTTGAATTTGTATAGGTCTTCTGCATCCTGCCACAGTCCTGAGTTCATCTGTGTATCTGTCCTGTTTTTCTTTATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGAGGCGGCCTCCTCTTCAGCCCTGTGTACTGCGTCCCTCAGCCCAGGGCATTTCCCTGACCTCTaGCAAAAGGGATATTATGGC | + |
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Preference number: 2 (lower is better) Translates to: GTEAASSSALCTASLSPGHFPDL*QKGYYG Trigger: GCCATAATATCCCTTTTGCCAGAGGTCAGGGAAATG...CCCTGGGCTGAGGGACGCAGTACACAGGGCTGAAGAGGAGGCCGCCTCTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR TCA 90 bp | GACCTGGAGAAAATGAGGACTGAGCATCCCAGAGAGGAACAGAGGCGGCCTCCTGTCTTCCCGCTCACCTaGGCACACTCATCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: DLEKMRTEHPREEQRRPPVFPLT*AHSSFS Trigger: TGAGAAGGATGAGTGTGCTCAGGTGAGCGGGAAGAC...AGGAGGCCGCCTCTGTTCCTCTCTGGGATGCTCAGTCCTCATTTTCTCCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | GGAACAGAGGCGGCCTCCTCTTCAGCCCTGTGTACTGCGTCCCTCAGCCCAGGGCCATCCAGATACCTTTaGATATATTCATATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GTEAASSSALCTASLSPGPSRYL*IYSYSL Trigger: GAGAGAATATGAATATATCCAAAGGTATCTGGATGG...CCCTGGGCTGAGGGACGCAGTACACAGGGCTGAAGAGGAGGCCGCCTCTGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR TCA 90 bp | ACGTTTCAAAACCTGCACTGGTCTTCCCGCTCACCTGAGCACACTCATCCTTCTGGACAGATACACAGATaGACTCAGGACTGTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: TFQNLHWSSRSPEHTHPSGQIHR*TQDCGR Trigger: CCTGCCACAGTCCTGAGTTCATCTGTGTATCTGTCC...AGAAGGATGAGTGTGCTCAGGTGAGCGGGAAGACCAGTGCAGGTTTTGAAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTACTTGTACGTTTCAAAACCTGCACTGGTCTTCCCGCTCACCTGAGCACAGAATATGAAGTTGGGTaGGTGGGGGAGGGGGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: QVLVRFKTCTGLPAHLSTEYEVG*VGEGEN Trigger: ATTCTCCCCCTCCCCCACCCACCCAACTTCATATTC...TGTGCTCAGGTGAGCGGGAAGACCAGTGCAGGTTTTGAAACGTACAAGTACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCCCAGCCCTCTTCTCATTCTATCTTCATCACCCAACTCCTTTGTGGCAAGGAGTGAGCTCAGGCTaGACTATGCAAGGATTTCTG | + |
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Preference number: 2 (lower is better) Translates to: GSPALFSFYLHHPTPLWQGVSSG*TMQGFL Trigger: CAGAAATCCTTGCATAGTCCAGCCTGAGCTCACTCC...TTGCCACAAAGGAGTTGGGTGATGAAGATAGAATGAGAAGAGGGCTGGGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTTATGTTGCCACCCACAGCAGCTGTGACTGCAGCCACTTACATTCTGTAGGTGTACCTCGGAGATaGTCTTCTCAGATTATTCCA | + |
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Preference number: 2 (lower is better) Translates to: PSYVATHSSCDCSHLHSVGVPRR*SSQIIP Trigger: TGGAATAATCTGAGAAGACCATCTCCGAGGTACACC...TACAGAATGTAAGTGGCTGCAGTCACAGCTGCTGTGGGTGGCAACATAAGAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CAA 90 bp | CCGTCTGTTTCCTTTTCTCTCTGCTCTGGACCCATCCAGATACCTTaGGATATATTCATATTCTCTCTCCCTCTCCCTCTCCCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSVSFSLCSGPIQIP*DIFIFSLPLPLPLS Trigger: AGAGAGAGGGAGAGGGAGAGGGAGAGAGAATATGAATATATCCAAAGGTATCTGGATGGGTCCAGAGCAGAGAGAAAAGGAAACAGACGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CAA 90 bp | CACTGCCATAATTTCAGGACAACTACTTACCCCTTCCCTCTTATGTaGCCACCCACAGCAGCTGTGACTGCAGCCACTTACATTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: HCHNFRTTTYPFPLM*PPTAAVTAATYILY Trigger: ATACAGAATGTAAGTGGCTGCAGTCACAGCTGCTGTGGGTGGCAACATAAGAGGGAAGGGGTAAGTAGTTGTCCTGAAATTATGGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CAA 90 bp | ATTCCTCACCCCACACACTTTTTCCGTGGCCATCATCTTACTCCCTaGCTGTTCTCACTATTCTCTCTCTTGTTATGCTCAATTCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IPHPTHFFRGHHLTP*LFSLFSLLLCSILH Trigger: ATGGAGAATTGAGCATAACAAGAGAGAGAATAGTGAGAACAGCAAGGGAGTAAGATGATGGCCACGGAAAAAGTGTGTGGGGTGAGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTTCCGTGGCCATCATCTTACTCCCTTGCTGTTCTCACTATTCTCTCTCTTGTTTCCTTTTCTCTCTaGTCTGGACCCATCCAGATA | + |
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Preference number: 2 (lower is better) Translates to: LFPWPSSYSLAVLTILSLVSFSL*SGPIQI Trigger: TATCTGGATGGGTCCAGAGCAGAGAGAAAAGGAAAC...AAGAGAGAGAATAGTGAGAACAGCAAGGGAGTAAGATGATGGCCACGGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGATTCCCTCAGTCCCTACTAACAAGTACTTGTACGTTTCAAAACCTGCACTTTTCTCTCTGCTCTaGACCCATCCAGATACCTTT | + |
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Preference number: 2 (lower is better) Translates to: LQIPSVPTNKYLYVSKPALFSLL*THPDTF Trigger: AAAGGTATCTGGATGGGTCCAGAGCAGAGAGAAAAG...TGCAGGTTTTGAAACGTACAAGTACTTGTTAGTAGGGACTGAGGGAATCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR TCA 90 bp | ATACTCCACATGATTCCTCACCCCACACACTTTTTCCGTGGCCATCATCTTACTTTTTCTTCAATGGAGTaGCACTTGGTGTATCAACCA | + |
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Preference number: 2 (lower is better) Translates to: ILHMIPHPTHFFRGHHLTFSSME*HLVYQP Trigger: TGGTTGATACACCAAGTGTCACTCCATTGAAGAAAA...AGTAAGATGATGGCCACGGAAAAAGTGTGTGGGGTGAGGAATCATGTGGAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACAGCTGGACAACTGAATGGAAAACTTTTGATTATCTTGAGTAAGGGAAAAGATTCCCATTCTGCCTaGAGGAGTCATTTCCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: ETAGQLNGKLLIILSKGKDSHSA*RSHFPD Trigger: GTCAGGGAAATGACTCCTTCAGGCAGAATGGGAATC...TTTTCCCTTACTCAAGATAATCAAAAGTTTTCCATTCAGTTGTCCAGCTGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR GCA 90 bp | TTGATTATCTTGAGTAAGGGAAAACTGAGAACCCAAGAGTACACTGTAGAACTGGCTCAGGCTGGACTATaGAAGGATTTCTGGTGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LIILSKGKLRTQEYTVELAQAGL*KDFWCL Trigger: TAGACACCAGAAATCCTTGCATAGTCCAGCCTGAGC...CAGTTCTACAGTGTACTCTTGGGTTCTCAGTTTTCCCTTACTCAAGATAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | AATATGAAATCCCAGCACAAAGTCAAGGGAAGGGAACACAAAATCCCACTCTTACACCAAGCTCAGGAGTaGATAATCAGCACAGATAAG | + |
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Preference number: 2 (lower is better) Translates to: NMKSQHKVKGREHKIPLLHQAQE*IISTDK Trigger: CTTATCTGTGCTGATTATCCACTCCTGAGCTTGGTG...TAAGAGTGGGATTTTGTGTTCCCTTCCCTTGACTTTGTGCTGGGATTTCATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | TTGATTATCTTGAGTAAGGGAAAACTGAGAACCCAAGAGTACACTGTAGAACTGATGAACTCAGGACTGTaGCAGGATGCAGAAGACCTA | + |
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Preference number: 2 (lower is better) Translates to: LIILSKGKLRTQEYTVELMNSGL*QDAEDL Trigger: TAGGTCTTCTGCATCCTGCCACAGTCCTGAGTTCAT...CAGTTCTACAGTGTACTCTTGGGTTCTCAGTTTTCCCTTACTCAAGATAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CCA 90 bp | AGAACCCAAGAGTACACTGTAGAACTGGAACCACCAAAAGAGGAACTCAGAGATATTGATTTTCTTCAATaGAGTGACACTTGGTGTATC | + |
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Preference number: 2 (lower is better) Translates to: RTQEYTVELEPPKEELRDIDFLQ*SDTWCI Trigger: GATACACCAAGTGTCACTCCATTGAAGAAAATCAAT...ATCTCTGAGTTCCTCTTTTGGTGGTTCCAGTTCTACAGTGTACTCTTGGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR GCA 72 bp | AGGAACAGAGGCGGCCTCCTCTTCAGCCCTGTGTACTaGGTCCCTCAGCCCAGGGTGATGGGAAGCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RNRGGLLFSPVY*VPQPRVMGSPA Trigger: GGCTGGGCTTCCCATCACCCTGGGCTGAGGGACGCAGTACACAGGGCTGAAGAGGAGGCCGCCTCTGTTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR TCA 72 bp | TCTTCAGCCCTGTGTACTGCGTCCCTCAGCCCAGGGTaGTGGGAAGCCCAGCCCTCTTCTCATTCTATCTTC | + |
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Preference number: 3 (lower is better) Translates to: SSALCTASLSPG*WEAQPSSHSIF Trigger: GAAGATAGAATGAGAAGAGGGCTGGGCTTCCCATCACCCTGGGCTGAGGGACGCAGTACACAGGGCTGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR TCA 72 bp | CAAAGGAGGCATTACAGACCTGGAGAAAATGAGGACTaGGCATCCCAGAGAGGAACAGAGGCGGCCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: QRRHYRPGENED*ASQRGTEAASS Trigger: AGAGGAGGCCGCCTCTGTTCCTCTCTGGGATGCTCAGTCCTCATTTTCTCCAGGTCTGTAATGCCTCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR TCA 72 bp | ACCCCTTCCCTCTTATGTTGCCACCCACAGCAGCTGTaGCTGCAGCCACTTACATTCTGTATGCTCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: TPSLLCCHPQQL*LQPLTFCMLCS Trigger: AGAGCAGAGCATACAGAATGTAAGTGGCTGCAGTCACAGCTGCTGTGGGTGGCAACATAAGAGGGAAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CAA 90 bp | CTTCCTTCATGCCCACTTCACTGCCATAATTTCAGGACAACTACTTACCCCTTCCAGGGAAGAGGGAAGTaGGGCATGAGAGCAACACTG | + |
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Preference number: 3 (lower is better) Translates to: LPSCPLHCHNFRTTTYPFQGRGK*GMRATL Trigger: CAGTGTTGCTCTCATGCCCAACTTCCCTCTTCCCTG...GAAGGGGTAAGTAGTTGTCCTGAAATTATGGCAGTGAAGTGGGCATGAAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR GCA 72 bp | CTTCCCTCTTATGTTGCCACCCACAGCAGCTGTGACTaGAGCCACTTACATTCTGTATGCTCTGCTCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: LPSYVATHSSCD*SHLHSVCSALL Trigger: AAGAAGAGCAGAGCATACAGAATGTAAGTGGCTGCAGTCACAGCTGCTGTGGGTGGCAACATAAGAGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 72 bp | TCAACCACACTCCACAGCAGGCACCAAGCTCAGGAGTaGATAATCAGCACAGATAAGACACGGTGGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: STTLHSRHQAQE*IISTDKTRWVF Trigger: AAAAACCCACCGTGTCTTATCTGTGCTGATTATCCACTCCTGAGCTTGGTGCCTGCTGTGGAGTGTGGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 72 bp | ACTCCACATGATTCCTCACCCCACACACTTTTTCCGTaGCCATCATCTTACTCCCTTGCTGTTCTCACTATT | + |
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Preference number: 3 (lower is better) Translates to: TPHDSSPHTLFP*PSSYSLAVLTI Trigger: AATAGTGAGAACAGCAAGGGAGTAAGATGATGGCCACGGAAAAAGTGTGTGGGGTGAGGAATCATGTGGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 72 bp | CTACTAACAAGTACTTGTACGTTTCAAAACCTGCACTaGTCTTCCCGCTCACCTGAGCACACTCATCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LLTSTCTFQNLH*SSRSPEHTHPS Trigger: AGAAGGATGAGTGTGCTCAGGTGAGCGGGAAGACCAGTGCAGGTTTTGAAACGTACAAGTACTTGTTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTTATGTTGCCACCCACAGCAGCTGTGACTGCAGCCACTTACATTCTGTATCACTATTCTCTCTCTaGTTATGCTCAATTCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: PSYVATHSSCDCSHLHSVSLFSL*LCSILH Trigger: ATGGAGAATTGAGCATAACAAGAGAGAGAATAGTGA...TACAGAATGTAAGTGGCTGCAGTCACAGCTGCTGTGGGTGGCAACATAAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 72 bp | AGGGAAGTTGGGCATGAGAGCAACACTGGAGACAGCTaGACAACTGAATGGAAAACTTTTGATTATCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: REVGHESNTGDS*TTEWKTFDYLE Trigger: CTCAAGATAATCAAAAGTTTTCCATTCAGTTGTCCAGCTGTCTCCAGTGTTGCTCTCATGCCCAACTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR TCA 72 bp | GGATGCAGAAGACCTATACAAATTCAAACCAGAATATaGAATCCCAGCACAAAGTCAAGGGAAGGGAACACA | + |
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Preference number: 3 (lower is better) Translates to: GCRRPIQIQTRI*NPSTKSREGNT Trigger: TGTGTTCCCTTCCCTTGACTTTGTGCTGGGATTTCATATTCTGGTTTGAATTTGTATAGGTCTTCTGCATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 72 bp | AAAAACAGGACAGATACACAGATGAACTCAGGACTGTaGCAGGATGCAGAAGACCTATACAAATTCAAACCA | + |
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Preference number: 3 (lower is better) Translates to: KNRTDTQMNSGL*QDAEDLYKFKP Trigger: TGGTTTGAATTTGTATAGGTCTTCTGCATCCTGCCACAGTCCTGAGTTCATCTGTGTATCTGTCCTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CCA 72 bp | TTTGATAATGATGGTGATTGTGGTGTACCTCGGAGATaGTCTTCTCAGATTATTCCAGGATTTGTAACATGT | + |
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Preference number: 3 (lower is better) Translates to: FDNDGDCGVPRR*SSQIIPGFVTC Trigger: ACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTACACCACAATCACCATCATTATCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR CCA 90 bp | GACCTGGAGAAAATGAGGACTGAGCATCCCAGAGAGGAACAGAGGCGGCCTCCTCCAGGATTTCCAGGATaGAGAGGTGAACAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DLEKMRTEHPREEQRRPPPGFPG*RGEQGR Trigger: TCTTCCTTGTTCACCTCTCCATCCTGGAAATCCTGG...AGGAGGCCGCCTCTGTTCCTCTCTGGGATGCTCAGTCCTCATTTTCTCCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CAA 72 bp | GGCCTCCAGATTCCCTCAGTCCCTACTAACAAGTACTaGTACGTTTCAAAACCTGCACTGGTCTTCCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLQIPSVPTNKY*YVSKPALVFPL Trigger: GAGCGGGAAGACCAGTGCAGGTTTTGAAACGTACAAGTACTTGTTAGTAGGGACTGAGGGAATCTGGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR GCA 90 bp | TTCAAAACCTGCACTGGTCTTCCCGCTCACCTGAGCACACTCATCCTTCTCATAGTCCCCAGAGCAAGTTaGAGAAAAAGTTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: FKTCTGLPAHLSTLILLIVPRAS*RKSWAT Trigger: TGTTGCCCAACTTTTTCTGCAACTTGCTCTGGGGAC...TATGAGAAGGATGAGTGTGCTCAGGTGAGCGGGAAGACCAGTGCAGGTTTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR CCA 90 bp | AGCAGGCACCAAGCTCAGGAGTGGATAATCAGCACAGATAAGACACGGTGGGTTGATAATTTGAGCAACTaGCCTCGGTCACAGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SRHQAQEWIISTDKTRWVDNLSN*PRSQKK Trigger: TTTCTTCTGTGACCGAGGCCAGTTGCTCAAATTATC...AACCCACCGTGTCTTATCTGTGCTGATTATCCACTCCTGAGCTTGGTGCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR GCA 90 bp | CTTCCTTCATGCCCACTTCACTGCCATAATTTCAGGACAACTACTTACCCCTTCGCCAAAGATATACTTTaGATTCCAGGGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPSCPLHCHNFRTTTYPFAKDIL*IPGSSS Trigger: GCTGCTGCTCCCTGGAATGCAAAGTATATCTTTGGC...GAAGGGGTAAGTAGTTGTCCTGAAATTATGGCAGTGAAGTGGGCATGAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CAA 72 bp | CATTTCCCTGACCTCTGGCAAAAGGGATATTATGGCTaGTATATAGTACCCATGCTGGCCTCCAGATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: HFPDLWQKGYYG*YIVPMLASRFP Trigger: AGGGAATCTGGAGGCCAGCATGGGTACTATATACAAGCCATAATATCCCTTTTGCCAGAGGTCAGGGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR GCA 90 bp | CCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCCGTCCCCAGAGCAAGTTaGAGAAAAAGTTGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: PRRWSSQIIPGFVTCVLAVPRAS*RKSWAT Trigger: TGTTGCCCAACTTTTTCTGCAACTTGCTCTGGGGAC...GGCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CCA 90 bp | ACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCCTGCCTGGGTCTGCTTaGGTTTCACATAGAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: TSEMVFSDYSRICNMCFGLPGSA*VSHRGT Trigger: TGTTCCTCTATGTGAAACCCAAGCAGACCCAGGCAG...GCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR TCA 90 bp | CCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCCGAACCCAAAGACCCATaGCACAATTACCACAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PRRWSSQIIPGFVTCVLAEPKDP*HNYHRV Trigger: AACTCTGTGGTAATTGTGTCATGGGTCTTTGGGTTC...GGCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR TCA 90 bp | ACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCTATTGCAGGATAATTTaGGCAACTGGCCTCGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: TSEMVFSDYSRICNMCFGYCRII*ATGLGH Trigger: GTGACCGAGGCCAGTTGCTCAAATTATCCTGCAATA...GCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR GCA 90 bp | GTACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGACGATCCACGGCCATTaGTCCAAGCAAAGAAAACTC | + |
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Preference number: 4 (lower is better) Translates to: VPRRWSSQIIPGFVTCVLTIHGH*SKQRKL Trigger: GAGTTTTCTTTGCTTGGAGCAATGGCCGTGGATCGT...CAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CCA 90 bp | GTACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGCCAGGATTTCCAGGATaGAGAGGTGAACAAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VPRRWSSQIIPGFVTCVLPGFPG*RGEQGR Trigger: TCTTCCTTGTTCACCTCTCCATCCTGGAAATCCTGG...CAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| 3UTR CAA 72 bp | CTTGTAACATTGCTAGCCATTGCAGAAAGAACATCATaGTTCCAGCAGCTTCGTAACAGTGCATTGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: LVTLLAIAERTS*FQQLRNSALHG Trigger: TCCATGCAATGCACTGTTACGAAGCTGCTGGAACAATGATGTTCTTTCTGCAATGGCTAGCAATGTTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| 3UTR CAA 72 bp | ACTGCAGCCACTTACATTCTGTATGCTCTGCTCTTCTaGCTTAAGGATATAGAGCTTGTAACATTGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: TAATYILYALLF*LKDIELVTLLA Trigger: GGCTAGCAATGTTACAAGCTCTATATCCTTAAGCAAGAAGAGCAGAGCATACAGAATGTAAGTGGCTGCAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR GCA 90 bp | TGTACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGCCAAAGATATACTTTaGATTCCAGGGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CTSEMVFSDYSRICNMCFAKDIL*IPGSSS Trigger: GCTGCTGCTCCCTGGAATGCAAAGTATATCTTTGGC...AAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CCA 90 bp | ACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCGATAATTTGAGCAACTaGCCTCGGTCACAGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TSEMVFSDYSRICNMCFGDNLSN*PRSQKK Trigger: TTTCTTCTGTGACCGAGGCCAGTTGCTCAAATTATC...GCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR TCA 90 bp | GAGACAGCTGGACAACTGAATGGAAAACTTTTGATTATCTTGAGTAAGGGAAAAGAACCCAAAGACCCATaGCACAATTACCACAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: ETAGQLNGKLLIILSKGKEPKDP*HNYHRV Trigger: AACTCTGTGGTAATTGTGTCATGGGTCTTTGGGTTC...TTTTCCCTTACTCAAGATAATCAAAAGTTTTCCATTCAGTTGTCCAGCTGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR TCA 90 bp | ACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCATTATCCACCACATTTaGTTTGCAGTAGTTAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TSEMVFSDYSRICNMCFGIIHHI*FAVVKV Trigger: CACCTTAACTACTGCAAATCAAATGTGGTGGATAAT...GCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| 3UTR CAA 72 bp | CATCTTACTCCCTTGCTGTTCTCACTATTCTCTCTCTaGTTATGCTCAATTCTCCATCTCCTGTTATATCCT | + |
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Preference number: 4 (lower is better) Translates to: HLTPLLFSLFSL*LCSILHLLLYP Trigger: AGGATATAACAGGAGATGGAGAATTGAGCATAACAAGAGAGAGAATAGTGAGAACAGCAAGGGAGTAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR TCA 90 bp | GTACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGATTATCCACCACATTTaGTTTGCAGTAGTTAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VPRRWSSQIIPGFVTCVLIIHHI*FAVVKV Trigger: CACCTTAACTACTGCAAATCAAATGTGGTGGATAAT...CAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS GCA 90 bp | AGTTGCAGAAAAAGTTGGGCAACACACCCAGCCAAAGATATACTTTaGATTCCAGGGAGCAGCAGCCCCCAGAGCATCACGGGCACAATA | + |
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Preference number: 5 (lower is better) Translates to: SCRKSWATHPAKDIL*IPGSSSPQSITGTI Trigger: TATTGTGCCCGTGATGCTCTGGGGGCTGCTGCTCCCTGGAATGCAAAGTATATCTTTGGCTGGGTGTGTTGCCCAACTTTTTCTGCAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CAA 90 bp | ATACTCCACATGATTCCTCACCCCACACACTTTTTCCGTGGCCATCATCTTACTGGTCCCCAGAGCAAGTaGCAGAAAAAGTTGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: ILHMIPHPTHFFRGHHLTGPQSK*QKKLGN Trigger: GTTGCCCAACTTTTTCTGCAACTTGCTCTGGGGACC...AGTAAGATGATGGCCACGGAAAAAGTGTGTGGGGTGAGGAATCATGTGGAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000216942.2 |
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| CDS-3UTR CAA 90 bp | ACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCGGTCCCCAGAGCAAGTaGCAGAAAAAGTTGGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: TSEMVFSDYSRICNMCFGGPQSK*QKKLGN Trigger: GTTGCCCAACTTTTTCTGCAACTTGCTCTGGGGACC...GCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CAA 90 bp | CCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCCAGCCAAAGATATACTTaGCATTCCAGGGAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: PRRWSSQIIPGFVTCVLASQRYT*HSREQQ Trigger: CTGCTGCTCCCTGGAATGCAAAGTATATCTTTGGCT...GGCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CAA 90 bp | TGTACCTCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTAGCCAAAGATATACTTaGCATTCCAGGGAGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: CTSEMVFSDYSRICNMCFSQRYT*HSREQQ Trigger: CTGCTGCTCCCTGGAATGCAAAGTATATCTTTGGCT...AAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGAGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS-3UTR CAA 90 bp | TCGGAGATGGTCTTCTCAGATTATTCCAGGATTTGTAACATGTGTTTTGGCCATTTATTGCAGGATAATTaGAGCAACTGGCCTCGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SEMVFSDYSRICNMCFGHLLQDN*SNWPRS Trigger: TGACCGAGGCCAGTTGCTCAAATTATCCTGCAATAA...ATGGCCAAAACACATGTTACAAATCCTGGAATAATCTGAGAAGACCATCTCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS CAA 90 bp | AAGTTGCAGAAAAAGTTGGGCAACACACCCAGCCAAAGATATACTTaGCATTCCAGGGAGCAGCAGCCCCCAGAGCATCACGGGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: KLQKKLGNTPSQRYT*HSREQQPPEHHGHN Trigger: ATTGTGCCCGTGATGCTCTGGGGGCTGCTGCTCCCTGGAATGCAAAGTATATCTTTGGCTGGGTGTGTTGCCCAACTTTTTCTGCAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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| CDS CAA 72 bp | AAACTCCGTGGTCCCCAGAGCAAGTTGCAGAAAAAGTaGGGCAACACACCCAGCCAAAGATATACTTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: KLRGPQSKLQKK*GNTPSQRYTLH Trigger: ATGCAAAGTATATCTTTGGCTGGGTGTGTTGCCCAACTTTTTCTGCAACTTGCTCTGGGGACCACGGAGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051540.5 ENSMUST00000216942.2 |
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