Pregenerated sensors for OLFR46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093942Ensembl transcript IDs: ENSMUST00000072655.3, ENSMUST00000211771.2, ENSMUST00000214180.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGAGGCTGAGGCTGCCTCCCAAGCCAGGCGGACACCTGTCCTCTaGTCCGGACGGTGGCTGGCTGTCTGCGGCCCACCAAGGGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: AEAEAASQARRTPVL*SGRWLAVCGPPRVL Trigger: CAGCACCCTTGGTGGGCCGCAGACAGCCAGCCACCGTCCGGACCAGAGGACAGGTGTCCGCCTGGCTTGGGAGGCAGCCTCAGCCTCAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TCTGGTCCGGACGGTGGCTGGCTGTCTGCGGCCCACCAAGGGTGCTaGCTCAGCGGCTCTGTGCTTCTGCCCGTCCCAGAAGCTGTCCGG | + |
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Preference number: 1 (lower is better) Translates to: SGPDGGWLSAAHQGC*LSGSVLLPVPEAVR Trigger: CCGGACAGCTTCTGGGACGGGCAGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGTGGGCCGCAGACAGCCAGCCACCGTCCGGACCAGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TCCTCTGGTCCGGACGGTGGCTGGCTGTCTGCGGCCCACCAAGGGTaGTGCCTCAGCGGCTCTGTGCTTCTGCCCGTCCCAGAAGCTGTC | + |
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Preference number: 1 (lower is better) Translates to: SSGPDGGWLSAAHQG*CLSGSVLLPVPEAV Trigger: GACAGCTTCTGGGACGGGCAGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGTGGGCCGCAGACAGCCAGCCACCGTCCGGACCAGAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | GCCAGGCGGACACCTGTCCTCTGGACCGGACGGTGGCCGGCTGTCTaGAGCCTGCAAAGGGTACTGCCTCAGCGGCTCTGTGCTTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ARRTPVLWTGRWPAV*SLQRVLPQRLCASS Trigger: GGAAGAAGCACAGAGCCGCTGAGGCAGTACCCTTTGCAGGCTGCAGACAGCCGGCCACCGTCCGGTCCAGAGGACAGGTGTCCGCCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TGTCTGCGGCCCACCAAGGGTGCTGCCTCAGCGGCTCTGTGCTTCTaGCCGTCCCAGAAGCTGTCCGGTTCTCTGGCGCACCCTCTAACC | + |
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Preference number: 1 (lower is better) Translates to: CLRPTKGAASAALCF*PSQKLSGSLAHPLT Trigger: GGTTAGAGGGTGCGCCAGAGAACCGGACAGCTTCTGGGACGGGCAGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGTGGGCCGCAGACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TCTGGACCGGACGGTGGCCGGCTGTCTGCAGCCTGCAAAGGGTACTaGCTCAGCGGCTCTGTGCTTCTTCCCGTCCCAGAAGCTGTCCGG | + |
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Preference number: 1 (lower is better) Translates to: SGPDGGRLSAACKGY*LSGSVLLPVPEAVR Trigger: CCGGACAGCTTCTGGGACGGGAAGAAGCACAGAGCCGCTGAGGCAGTACCCTTTGCAGGCTGCAGACAGCCGGCCACCGTCCGGTCCAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TGTCTGCGGCCCACCAAGGGTGCTGCCACAGCGGCTCTGTGCTTCTaGCTGTCCCAACCTGTCAGCAAAATCTTGCTGGCATATGCAATA | + |
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Preference number: 1 (lower is better) Translates to: CLRPTKGAATAALCF*LSQPVSKILLAYAI Trigger: TATTGCATATGCCAGCAAGATTTTGCTGACAGGTTGGGACAGGCAGAAGCACAGAGCCGCTGTGGCAGCACCCTTGGTGGGCCGCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TCTCTCAGCAGACCTGGGAGACAGATTCTCTCCTCTGAGTTTCAGTaGTCAGAGCACTCTCTGCTGGCGAGCTCTCTTACAGGGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLSRPGRQILSSEFQ*SEHSLLASSLTGKV Trigger: CACCTTCCCTGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGTCTCCCAGGTCTGCTGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | CCTGGACTGGGCGAAGTGGGAGTGCTGGGTTCTGATGATGGTGAGTaGTCTTGGTTCCTGTTAGTAGGATTCCTAGGTTTACCTTTCGCC | + |
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Preference number: 1 (lower is better) Translates to: PGLGEVGVLGSDDGE*SWFLLVGFLGLPFA Trigger: GGCGAAAGGTAAACCTAGGAATCCTACTAACAGGAACCAAGACCACTCACCATCATCAGAACCCAGCACTCCCACTTCGCCCAGTCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | GCCCACTGTCTCTTGTCTAACCCCAGTTGGCTATCTTCCCAGCTCTaGCTTGCCTGTCTCAGAGCTGCTCATTCCTTTTCAGCCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: AHCLLSNPSWLSSQL*LACLRAAHSFSAIY Trigger: GTAGATGGCTGAAAAGGAATGAGCAGCTCTGAGACAGGCAAGTCAGAGCTGGGAAGATAGCCAACTGGGGTTAGACAAGAGACAGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | CTGCCCTTTCTCCACTGTGTTGTCTTCTCATCAATATCTCAGCAGTaGACACAGATGCACTTCTCCCTCCTCTCCCTCCTCCCCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: LPFLHCVVFSSISQQ*TQMHFSLLSLLPFL Trigger: AAGAAAGGGGAGGAGGGAGAGGAGGGAGAAGTGCATCTGTGTCCACTGCTGAGATATTGATGAGAAGACAACACAGTGGAGAAAGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | AGAACAAGGCCCAAAACAGGGCCTTTCTTAGAAGCTGTGTTGCTTTaGCAGTTCCCAGAAGCTGTCAGCTTCTGTGGTGCAGACTCTCAC | + |
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Preference number: 1 (lower is better) Translates to: RTRPKTGPFLEAVLL*QFPEAVSFCGADSH Trigger: GTGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTAAGAAAGGCCCTGTTTTGGGCCTTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | GACAGATTCTCTCCTCTGAGTTTCAGTGCTCAGAGCACTCTCTGCTaGCGAGCTCTCTTACAGGGAAGGTGCGCAGATATCTTGTTTTTG | + |
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Preference number: 1 (lower is better) Translates to: DRFSPLSFSAQSTLC*RALLQGRCADILFL Trigger: CAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | CCATCTATGGTAATTGTGAGTTTGGCTGGGTATAGTAGCCTGGGCTaGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: PSMVIVSLAGYSSLG*NLCSLSVCITSVQA Trigger: AGCCTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACTATACCCAGCCAAACTCACAATTACCATAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | GAGTATTCCTCTTTCTCCACATCCTCACCAGCATCTTCTGTCAGCTaGATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCT | + |
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Preference number: 1 (lower is better) Translates to: EYSSFSTSSPASSVS*IFDLSHSDWCEVES Trigger: AGATTCTACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGCTGACAGAAGATGCTGGTGAGGATGTGGAGAAAGAGGAATACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR GCA 90 bp | TGGAACATGTGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGACTTTCAGGTAGTACTATGTTCA | + |
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Preference number: 1 (lower is better) Translates to: WNMCPYYKLEHLLGI*PGEVLLDFQVVLCS Trigger: TGAACATAGTACTACCTGAAAGTCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | CTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCATAGTCTCTGGTaGAAAATCTGGTGTAATTCTGATAGGCTTGCCTTTGTATGTTAC | + |
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Preference number: 1 (lower is better) Translates to: LYNICPGSSGFHSLW*KIWCNSDRLAFVCY Trigger: GTAACATACAAAGGCAAGCCTATCAGAATTACACCAGATTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGATGTTATACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | TTTACCTTTCGCCATCTGGTAATCTCTGGAGTTAGTAGTTATAGTTaGCTCTGTTTAGAGATTGTTCTTCTGGTGATTCTGTTACCGTCT | + |
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Preference number: 1 (lower is better) Translates to: FTFRHLVISGVSSYS*LCLEIVLLVILLPS Trigger: AGACGGTAACAGAATCACCAGAAGAACAATCTCTAAACAGAGTCAACTATAACTACTAACTCCAGAGATTACCAGATGGCGAAAGGTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | GATTATTATGTGTCGGGAGGAATTTCTTTTCTGGTCCAGTCTATTTaGAGTTCTGTAGGCTTCTTGTATGTTCATGGGTATCTCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: DYYVSGGISFLVQSI*SSVGFLYVHGYLFL Trigger: AAGAAAGAGATACCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | ATGGGACAAAGTCAATATTTGGAAAAGGTATTTGGGTCACAAGGATaGATTACTGTACCATACATGATTTACATCACAACTGCTGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: MGQSQYLEKVFGSQG*ITVPYMIYITTAGV Trigger: CACACCAGCAGTTGTGATGTAAATCATGTATGGTACAGTAATTCATCCTTGTGACCCAAATACCTTTTCCAAATATTGACTTTGTCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | TCCATTGGTGAAAGTGGTGTGTTGAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCTTTGAGCTTTACTAAAATTTCTTTAATG | + |
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Preference number: 1 (lower is better) Translates to: SIGESGVLKSPTIIV*GAMCALSFTKISLM Trigger: CATTAAAGAAATTTTAGTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR TCA 90 bp | TTGTTGATTTTCTCAAAGAACCAACTACTCGTTTGGTTAATTCTTTaGATAGTTCTTCTTGTTTCCACTTGGTTGATTTCACCCCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: LLIFSKNQLLVWLIL*IVLLVSTWLISPLS Trigger: ACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGAGTAGTTGGTTCTTTGAGAAAATCAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CCA 90 bp | ATGAAATTTAGATTCATTAACCAAGGCTCTGTGGTATTTATAGGGTaGCATTGGATGAAAGGCTATTATTTGACTATCACCAATGTCATC | + |
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Preference number: 1 (lower is better) Translates to: MKFRFINQGSVVFIG*HWMKGYYLTITNVI Trigger: GATGACATTGGTGATAGTCAAATAATAGCCTTTCATCCAATGCCACCCTATAAATACCACAGAGCCTTGGTTAATGAATCTAAATTTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGCACTCTCTGCTGGCGAGCTCTCTTACAGGGAAGGTGCGCAGATATCTGAAGCTGTGTTGCTTTaGCAGTTCCCAGAAGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: LRALSAGELSYREGAQISEAVLL*QFPEAV Trigger: GACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTC...AGATATCTGCGCACCTTCCCTGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 90 bp | GGTCGAAGAACAAGGCCCAAAACAGGGCCTTTCTTAGAAGCTGTGTaGCTTTGGCAGTTCCCAGAAGCTGTCAGCTTCTGTGGTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: GRRTRPKTGPFLEAV*LWQFPEAVSFCGAD Trigger: GTCTGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTAAGAAAGGCCCTGTTTTGGGCCTTGTTCTTCGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR GCA 90 bp | GGATGGATCCCAAGGTGGGGCAGTCTCTTGATTGTCCTTTCTTCCATCTCAGCTCTCAGCATCAGCTGTTaGAGATGCTGCCCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GWIPRWGSLLIVLSSISALSISC*RCCPFS Trigger: GGAGAAAGGGCAGCATCTGCAACAGCTGATGCTGAG...AGCTGAGATGGAAGAAAGGACAATCAAGAGACTGCCCCACCTTGGGATCCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | GGATGGATCCCAAGGTGGGGCAGTCTCTTGATTGTCCTTTCTTCCATCTCAGCTCAAGTGGCCATGGATTaGAGCTTCTGGAACTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: GWIPRWGSLLIVLSSISAQVAMD*SFWNCC Trigger: GCAACAGTTCCAGAAGCTTCAATCCATGGCCACTTG...AGCTGAGATGGAAGAAAGGACAATCAAGAGACTGCCCCACCTTGGGATCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGCACTCTCTGCTGGCGAGCTCTCTTACAGGGAAGGTGCGCAGATATCTTCAATATCTCAGCAGTaGACACAGATGCACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LRALSAGELSYREGAQISSISQQ*TQMHFS Trigger: GGAGAAGTGCATCTGTGTCCACTGCTGAGATATTGA...AGATATCTGCGCACCTTCCCTGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACGGATGGATCCCAAGGTaGGGCAGTCTCTTGATTGTC | + |
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Preference number: 2 (lower is better) Translates to: PVQTNYLSSAESRNQDGDGWIPR*GSLLIV Trigger: GACAATCAAGAGACTGCCCCACCTTGGGATCCATCC...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 90 bp | GCCTTGGGTGTTCTGTTCAGGAATCTTTCCGCTGTGCCCATATCTTaGAGGGAAAGCCTCCTTTTCGATGTCCCCCTCTTCTATGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: ALGVLFRNLSAVPIS*RESLLFDVPLFYVF Trigger: GAACACATAGAAGAGGGGGACATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAACAGAACACCCAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 90 bp | AAGAACAAGGCCCAAAACAGGGCCTTTCTTAGAAGCTGTGTTGCTTaGGCAGTTCCCAGAAGCTGTCAGCTTCTGTGGTGCAGACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: KNKAQNRAFLRSCVA*AVPRSCQLLWCRLS Trigger: TGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTAAGAAAGGCCCTGTTTTGGGCCTTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACGGTGGGGCAGTCTCTTaGTTGTCCTTTCTTCCATCT | + |
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Preference number: 2 (lower is better) Translates to: PVQTNYLSSAESRNQDGDGGAVS*LSFLPS Trigger: AGATGGAAGAAAGGACAATCAAGAGACTGCCCCACC...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTTTGAGGGAAAGCCTCCTTTTCGATGTCCCCCTCTTCTATGTGTTCTGGGCATCAGCTGTTGCAGATaGTGCCCTTTCTCCACTGTG | + |
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Preference number: 2 (lower is better) Translates to: IFEGKPPFRCPPLLCVLGISCCR*CPFSTV Trigger: CACAGTGGAGAAAGGGCAGCATCTGCAACAGCTGAT...GCCCAGAACACATAGAAGAGGGGGACATCGAAAAGGAGGCTTTCCCTCAAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAATCTTTCCGCTGTGCCCATATCTTTGAGGGAAAGCCTCCTTTTCGATCAGTTTCACTGGCTTTaGTGTCCACAGCACAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FRNLSAVPISLRESLLFDQFHWL*CPQHSW Trigger: CCAGCTGTGCTGTGGACATCAAAGCCAGTGAAACTG...ATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACTTACCTCACTCAGGATaGTATCCTCCAGATCCATCC | + |
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Preference number: 2 (lower is better) Translates to: PVQTNYLSSAESRNQDGDLPHSG*YPPDPS Trigger: GGATGGATCTGGAGGATATCATCCTGAGTGAGGTAA...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACAAGAGATTGAGAGATTaGGAGAGGGGTTGGATAGGT | + |
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Preference number: 2 (lower is better) Translates to: PVQTNYLSSAESRNQDGDKRLRD*ERGWIG Trigger: ACCTATCCAACCCCTCTCTCAATCTCTCAATCTCTT...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACACCAATGTCATCCACTaGATATCTTTCAGCCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PVQTNYLSSAESRNQDGDTNVIH*ISFSLG Trigger: TCCTAGGCTGAAAGATATTCAGTGGATGACATTGGT...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCCCTTTCTTCCTTTCTGTTATCACAGTGTTTTAGCCATGAGTGGTTGGTCACACAGCTGGGAGCTGTaGAATTACAAGCCTGAGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPFLPFCYHSVLAMSGWSHSWEL*NYKPES Trigger: TGACTCAGGCTTGTAATTTCACAGCTCCCAGCTGTG...TGACCAACCACTCATGGCTAAAACACTGTGATAACAGAAAGGAAGAAAGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGCTATCTTCCCAGCTCTaGCTTGCCTGTCTCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGCFDLLSSQL*LACLRA Trigger: AGCTCTGAGACAGGCAAGTCAGAGCTGGGAAGATAG...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAATCTTTCCGCTGTGCCCATATCTTTGAGGGAAAGCCTCCTTTTCGATTGGGCTGCCATGTTGTaGGGAAGTTTCTCTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: FRNLSAVPISLRESLLFDWAAML*GSFSST Trigger: TGTAGAAGAGAAACTTCCTCACAACATGGCAGCCCA...ATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACCTCTGTTCAATTGATTaGATGCCCCTTCAAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: PVQTNYLSSAESRNQDGDLCSID*MPLQTS Trigger: ACTGGTTTGAAGGGGCATGCAATCAATTGAACAGAG...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGGAATCTTTCCGCTGTGCCCATATCTTTGAGGGAAAGCCTCCTTTTCGATGAGACAGAAAGAGATTaGGAGATTGAGAGAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: FRNLSAVPISLRESLLFDETERD*EIERGV Trigger: AACCCCTCTCTCAATCTCTCAATCTCTTTCTGTCTC...ATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGCTGTGCCCATATCTTTaGGGGAAAGCCTCCTTTTCG | + |
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Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGCFDLLCPYL*GKASFS Trigger: CGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAG...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGAGCAGTGGACACAGATaGACTTCTCCCTCCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: STIIMRYAFKSRSRFSGVSSGHR*TSPSSP Trigger: GGGAGAGGAGGGAGAAGTGCATCTGTGTCCACTGCT...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 90 bp | ATGGTAATTGTGAGTTTGGCTGGGTATAGTAGCCTGGGCTGGAATTaGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGGCTCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: MVIVSLAGYSSLGWN*CSLSVCITSVQALL Trigger: CAGAAGAGCCTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACTATACCCAGCCAAACTCACAATTACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTTGAGGGAAAGCCTCCTTTTCGATGTCCCCCTCTTCTATGTGTTCTGGGCAAAAATTCTGCTACATaGAACCATGGGACAAAGTCA | + |
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Preference number: 2 (lower is better) Translates to: IFEGKPPFRCPPLLCVLGKNSAT*NHGTKS Trigger: TGACTTTGTCCCATGGTTTCATGTAGCAGAATTTTT...GCCCAGAACACATAGAAGAGGGGGACATCGAAAAGGAGGCTTTCCCTCAAAGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 90 bp | GGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATTCAACTTaGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: GIWDCLEGQLDPDST*VPGICPEICPFRPG Trigger: ACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCTTCTAAACAGTCCCATATCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGTCATCTCTGTTCAATTaGTTGCATGCCCCTTCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSLGWNLCSLSVCITSVQSSLFN*LHAPSN Trigger: GTTTGAAGGGGCATGCAATCAATTGAACAGAGATGA...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGAGAATGGGCATAGTCTaGAATGGTATGGCATCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGCFDLRMGIV*NGMASQ Trigger: CTGAGATGCCATACCATTTCAGACTATGCCCATTCT...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCTTCTTCCTGTCCCTATCCTGTCCTGCAACTCTTCGTTCGAAAACCCTTTTTACTGTACCATACATaGTTTACATCACAACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: FPSSCPYPVLQLFVRKPFLLYHT*FTSQLL Trigger: CAGCAGTTGTGATGTAAATCATGTATGGTACAGTAA...AAAGGGTTTTCGAACGAAGAGTTGCAGGACAGGATAGGGACAGGAAGAAGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATATCCCCACGAGGCCCTaGTGCAATATAGGCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SKKERRIYTFVFVLLEFHIPTRP*CNIGPN Trigger: GTTTGGGCCTATATTGCAGCAGGGCCTCGTGGGGAT...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTTTGAGGGAAAGCCTCCTTTTCGATGTCCCCCTCTTCTATGTGTTCTGGGCGACAAAGTCAATATTTaGAAAAGGTATTTGGGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IFEGKPPFRCPPLLCVLGDKVNI*KRYLGH Trigger: GTGACCCAAATACCTTTTCCAAATATTGACTTTGTC...GCCCAGAACACATAGAAGAGGGGGACATCGAAAAGGAGGCTTTCCCTCAAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGGCCCAAACAATCAAGTaGCCATGGATTGAAGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGCFDLAQTIK*PWIEAS Trigger: AGAAGCTTCAATCCATGGCCACTTGATTGTTTGGGC...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGCAATCCCACCAGCAATaGAAGAGTATTCCTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSLGWNLCSLSVCITSVQQSHQQ*KSIPLS Trigger: AGAAAGAGGAATACTCTTCCATTGCTGGTGGGATTG...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCAGGAATCTTTCCGCTGTGCCCATATCTTTGAGGGAAAGCCTCCTTTTCGATGTTCTTGTCAGGAGATaGAGCTGGTGTTTTTATTTA | + |
|
Preference number: 2 (lower is better) Translates to: FRNLSAVPISLRESLLFDVLVRR*SWCFYL Trigger: TAAATAAAAACACCAGCTTCATCTCCTGACAAGAAC...ATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCAGGAATCTTTCCGCTGTGCCCATATCTTTGAGGGAAAGCCTCCTTTTCGATTTAGCCATGAGTGGTTaGTCACAAAATGGATTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: FRNLSAVPISLRESLLFDLAMSG*SQNGFY Trigger: ATAGAATCCATTTTGTGACCAACCACTCATGGCTAA...ATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGGCCTTACAGAAGCTTTaGAGTTTTATGAGGTCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: DLSHSDWCEVESQGCFDLALQKL*SFMRSY Trigger: ATAGGACCTCATAAAACTGCAAAGCTTCTGTAAGGC...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGAAGCCACGCAGAATCTaGATCATCTTTCTCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: STIIMRYAFKSRSRFSGVKPRRI*IIFLFL Trigger: GAGGAAGAGAAAGATGATCCAGATTCTGCGTGGCTT...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGTGAGTGTTCTTTTGTaGTTGGGTTACCTCACTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKKERRIYTFVFVLLEFHVSVLL*LGYLTQ Trigger: CTGAGTGAGGTAACCCAATCACAAAAGAACACTCAC...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 90 bp | ATTCGTGGAGAGATAATGTGTGAATTTGGTTTTTCGTGGAATACTTaGGTTTCTCCATCTATGGTAATTGTGAGTTTGGCTGGGTATAGT | + |
|
Preference number: 2 (lower is better) Translates to: IRGEIMCEFGFSWNT*VSPSMVIVSLAGYS Trigger: ACTATACCCAGCCAAACTCACAATTACCATAGATGGAGAAACCAAAGTATTCCACGAAAAACCAAATTCACACATTATCTCTCCACGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 90 bp | GTTGTTATGTCTCCCTTTTCAGTTCTGATTTTGTTAATTAGGATTTaGTCCCTGTGCCCTTTAGTGAGTCTAGCTAAGGGTTTATCTATC | + |
|
Preference number: 2 (lower is better) Translates to: VVMSPFSVLILLIRI*SLCPLVSLAKGLSI Trigger: GATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGACATAACAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTATGAGGGGAGATTTGTaGGAGGGGAAAGAATATGAT | + |
|
Preference number: 2 (lower is better) Translates to: ESTLLSSFFLSFMCFARCMRGDL*EGKEYD Trigger: ATCATATTCTTTCCCCTCCCACAAATCTCCCCTCAT...ACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 90 bp | TTGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTATCTaGGGTAGTCTAAGTTTCTGGGTTAATATCCACTTATCAGTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSSFFLSFMCFARCI*GSLSFWVNIHLSVS Trigger: ACTCACTGATAAGTGGATATTAACCCAGAAACTTAGACTACCCAAGATACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 90 bp | TTGTTGCTTCCTGTTATTTTTGTTGTTAAAGTTGGCATTCTGTTCTaGTGGCTGTCTTCTTTTAGGTTTGTTGAGGGATTACCTTCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LLLPVIFVVKVGILF*WLSSFRFVEGLPSC Trigger: ACAAGAAGGTAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAACTTTAACAACAAAAATAACAGGAAGCAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGTCACAATTCACAAGATaGCCACACAATAATTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: STIIMRYAFKSRSRFSGVSQFTR*PHNNFR Trigger: TCTGAAATTATTGTGTGGGCATCTTGTGAATTGTGA...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATATTGACAGTGTCTTTTaGCTTACAGAAGCTTTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKKERRIYTFVFVLLEFHIDSVF*LTEALQ Trigger: CTGCAAAGCTTCTGTAAGGCAAAAGACACTGTCAAT...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGTTTGGAAAAGGTATTTaGGTCACAAGGATGAATTAC | + |
|
Preference number: 2 (lower is better) Translates to: STIIMRYAFKSRSRFSGVFGKGI*VTRMNY Trigger: GTAATTCATCCTTGTGACCCAAATACCTTTTCCAAA...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 90 bp | ATTCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTGCAAGATGTATCTTGGGTAGTCTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ILRRNEESTLLSSFF*SFMCFARCILGSLS Trigger: ACTTAGACTACCCAAGATACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTGATGAACTGCAAAACTaGTTTTTAGAGTGGTTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: ESTLLSSFFLSFMCFARCDELQN*FLEWLY Trigger: GTACAACCACTCTAAAAATCAGTTTTGCAGTTCATC...ACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTTATCCATTTCTCTGTTaGAGAACATCTGGGTTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: ESTLLSSFFLSFMCFARCYPFLC*RTSGFF Trigger: AAAGAACCCAGATGTTCTTCAACAGAGAAATGGATA...ACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATATATCCACTTATCAGTaGGTGTTCTTTTGTGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: SKKERRIYTFVFVLLEFHISTYQ*VFFCDW Trigger: CCAATCACAAAAGAACACTCACTGATAAGTGGATAT...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTTGCTACATGAAACCATaGGACAAAGTCAATATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: ESTLLSSFFLSFMCFARCCYMKP*DKVNIW Trigger: CCAAATATTGACTTTGTCCCATGGTTTCATGTAGCA...ACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GAGGCCGCCTCCCAAGCCAGGCGGACACCTGTCCTCTaGTCCGGACGGTGGCTGGCTGTCTGCGGCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: EAASQARRTPVL*SGRWLAVCGPP Trigger: TGGTGGGCCGCAGACAGCCAGCCACCGTCCGGACCAGAGGACAGGTGTCCGCCTGGCTTGGGAGGCGGCCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | CCGGACGGTGGCTGGCTGTCTGCGGCCCACCAAGGGTaGTGCCTCAGCGGCTCTGTGCTTCTGCCCGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDGGWLSAAHQG*CLSGSVLLPVP Trigger: TGGGACGGGCAGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGTGGGCCGCAGACAGCCAGCCACCGTCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GAGGCCGCCTCCAGAGCCAGGCGGACACCTGTCCTCTaGACCGGACGGTGGCCGGCTGTCTGCAGCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: EAASRARRTPVL*TGRWPAVCSLQ Trigger: TTGCAGGCTGCAGACAGCCGGCCACCGTCCGGTCCAGAGGACAGGTGTCCGCCTGGCTCTGGAGGCGGCCTC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | CCGGACGGTGGCTGGCTGTCTGCGGCCCACCAAGGGTaGTGCCACAGCGGCTCTGTGCTTCTGCCTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PDGGWLSAAHQG*CHSGSVLLPVP Trigger: TGGGACAGGCAGAAGCACAGAGCCGCTGTGGCAGCACCCTTGGTGGGCCGCAGACAGCCAGCCACCGTCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | CCCACCAAGGGTGCTGCCTCAGCGGCTCTGTGCTTCTaGCCGTCCCAGAAGCTGTCCGGTTCTCTGGCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: PTKGAASAALCF*PSQKLSGSLAH Trigger: GTGCGCCAGAGAACCGGACAGCTTCTGGGACGGGCAGAAGCACAGAGCCGCTGAGGCAGCACCCTTGGTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | ACACCTGTCCTCTGGACCGGACGGTGGCCGGCTGTCTaGAGCCTGCAAAGGGTACTGCCTCAGCGGCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TPVLWTGRWPAV*SLQRVLPQRLC Trigger: ACAGAGCCGCTGAGGCAGTACCCTTTGCAGGCTGCAGACAGCCGGCCACCGTCCGGTCCAGAGGACAGGTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | GACGGTGGCCGGCTGTCTGCAGCCTGCAAAGGGTACTaGCTCAGCGGCTCTGTGCTTCTTCCCGTCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: DGGRLSAACKGY*LSGSVLLPVPE Trigger: TTCTGGGACGGGAAGAAGCACAGAGCCGCTGAGGCAGTACCCTTTGCAGGCTGCAGACAGCCGGCCACCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | TCCTCTGGACCGGACGGTGGCCGGCTGTCTGCAGCCTaGAAAGGGTACTGCCTCAGCGGCTCTGTGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSGPDGGRLSAA*KGYCLSGSVLL Trigger: AAGAAGCACAGAGCCGCTGAGGCAGTACCCTTTGCAGGCTGCAGACAGCCGGCCACCGTCCGGTCCAGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | CCCACCAAGGGTGCTGCCACAGCGGCTCTGTGCTTCTaGCTGTCCCAACCTGTCAGCAAAATCTTGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: PTKGAATAALCF*LSQPVSKILLA Trigger: TGCCAGCAAGATTTTGCTGACAGGTTGGGACAGGCAGAAGCACAGAGCCGCTGTGGCAGCACCCTTGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | GTGTGTTGGGGTGCCCTGGACTGGGCGAAGTGGGAGTaGTGGGTTCTGATGATGGTGAGTGGTCTTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VCWGALDWAKWE*WVLMMVSGLGS Trigger: GGAACCAAGACCACTCACCATCATCAGAACCCAGCACTCCCACTTCGCCCAGTCCAGGGCACCCCAACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GGTCTAGGTTTTCGGGTGTGTTGGGGTGCCCTGGACTaGGCGAAGTGGGAGTGCTGGGTTCTGATGATGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GLGFRVCWGALD*AKWECWVLMMV Trigger: CACCATCATCAGAACCCAGCACTCCCACTTCGCCCAGTCCAGGGCACCCCAACACACCCGAAAACCTAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | TGTTGGGGTGCCCTGGACTGGGCGAAGTGGGAGTGCTaGGTTCTGATGATGGTGAGTGGTCTTGGTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CWGALDWAKWEC*VLMMVSGLGSC Trigger: ACAGGAACCAAGACCACTCACCATCATCAGAACCCAGCACTCCCACTTCGCCCAGTCCAGGGCACCCCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | GTCTCTCAGCAGACCTGGGAGACAGATTCTCTCCTCTaGGTTTCAGTGCTCAGAGCACTCTCTGCTGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSQQTWETDSLL*VSVLRALSAGE Trigger: CTCGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGTCTCCCAGGTCTGCTGAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | GCTATCTTCCCAGCTCTGACTTGCCTGTCTCAGAGCTaGTCATTCCTTTTCAGCCATCTACCCCCTGCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: AIFPALTCLSQS*SFLFSHLPPAA Trigger: AGCCGCAGGGGGTAGATGGCTGAAAAGGAATGAGCAGCTCTGAGACAGGCAAGTCAGAGCTGGGAAGATAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | TTTAAATCTAGGTCTAGGTTTTCGGGTGTGTTGGGGTaGCCTGGACTGGGCGAAGTGGGAGTGCTGGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FKSRSRFSGVLG*PGLGEVGVLGS Trigger: AGAACCCAGCACTCCCACTTCGCCCAGTCCAGGGCACCCCAACACACCCGAAAACCTAGACCTAGATTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | TCTCCTCTGAGTTTCAGTGCTCAGAGCACTCTCTGCTaGCGAGCTCTCTTACAGGGAAGGTGCGCAGATATC | + |
|
Preference number: 3 (lower is better) Translates to: SPLSFSAQSTLC*RALLQGRCADI Trigger: GATATCTGCGCACCTTCCCTGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | ATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGTTaGGGTGCCCTGGACTGGGCGAAGTGGGAGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MLLNLGLGFRVC*GALDWAKWECW Trigger: CCAGCACTCCCACTTCGCCCAGTCCAGGGCACCCCAACACACCCGAAAACCTAGACCTAGATTTAAAAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | AGACCTGGGAGACAGATTCTCTCCTCTGAGTTTCAGTaGTCAGAGCACTCTCTGCTGGCGAGCTCTCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: RPGRQILSSEFQ*SEHSLLASSLT Trigger: TGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAGCACTGAAACTCAGAGGAGAGAATCTGTCTCCCAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | CCCAAAACAGGGCCTTTCTTAGAAGCTGTGTTGCTTTaGCAGTTCCCAGAAGCTGTCAGCTTCTGTGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PKTGPFLEAVLL*QFPEAVSFCGA Trigger: TGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAACACAGCTTCTAAGAAAGGCCCTGTTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATGGATCCCAAGGTGGGGCAGTCTCTTGATTGTCCTTTCTTCCATCTCAGCTAGGATGAGGGGAGATTaGTGGGAGGGGAAAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: GWIPRWGSLLIVLSSISARMRGD*WEGKEY Trigger: ATATTCTTTCCCCTCCCACAAATCTCCCCTCATCCT...AGCTGAGATGGAAGAAAGGACAATCAAGAGACTGCCCCACCTTGGGATCCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | TTGTCTTCTCATCAATATCTCAGCAGTGGACACAGATaGACTTCTCCCTCCTCTCCCTCCTCCCCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LSSHQYLSSGHR*TSPSSPSSPFF Trigger: GAAGAAAGGGGAGGAGGGAGAGGAGGGAGAAGTGCATCTGTGTCCACTGCTGAGATATTGATGAGAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | TCTCTTCTACATAAGCCAATCCCCACGAGGCCCTGCTaGAATATAGGCCCAAACAATCAAGTGGCCATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SLLHKPIPTRPC*NIGPNNQVAMD Trigger: ATCCATGGCCACTTGATTGTTTGGGCCTATATTGCAGCAGGGCCTCGTGGGGATTGGCTTATGTAGAAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | GTTTCTCTTCTACATAAGCCAATCCCCACGAGGCCCTaGTGCAATATAGGCCCAAACAATCAAGTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VSLLHKPIPTRP*CNIGPNNQVAM Trigger: CATGGCCACTTGATTGTTTGGGCCTATATTGCAGCAGGGCCTCGTGGGGATTGGCTTATGTAGAAGAGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GTTGCTTTGGCAGTTCCCAGAAGCTGTCAGCTTCTGTaGTGCAGACTCTCACCTGTGCAGACTAAATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VALAVPRSCQLL*CRLSPVQTKFL Trigger: TAGGAATTTAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGAACTGCCAAAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | CTCTCTTACAGGGAAGGTGCGCAGATATCTTGTTTTTaGACCTCCTCCTGGTCGAAGAACAAGGCCCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSYREGAQISCF*TSSWSKNKAQN Trigger: GTTTTGGGCCTTGTTCTTCGACCAGGAGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGTCTCAGCATCAGCTGTaGCAGATGCTGCCCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: DLSHSDWCEVESQGCFDLSQHQL*QMLPFL Trigger: GAGAAAGGGCAGCATCTGCAACAGCTGATGCTGAGA...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | TGTATATGGGATGGATCCCAAGGTGGGGCAGTCTCTTaGTTGTCCTTTCTTCCATCTCAGCTCCAAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CIWDGSQGGAVS*LSFLPSQLQTL Trigger: CAAAGTTTGGAGCTGAGATGGAAGAAAGGACAATCAAGAGACTGCCCCACCTTGGGATCCATCCCATATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | CCTTTTCGATGTCCCCCTCTTCTATGTGTTCTGGGCTaGCATGTTGTGAGGAAGTTTCTCTTCTACATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: PFRCPPLLCVLG*HVVRKFLFYIS Trigger: GCTTATGTAGAAGAGAAACTTCCTCACAACATGGCAGCCCAGAACACATAGAAGAGGGGGACATCGAAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGTCAAGTGGCCATGGATaGAAGCTTCTGGAACTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLGWNLCSLSVCITSVQSSGHG*KLLELL Trigger: CAACAGTTCCAGAAGCTTCAATCCATGGCCACTTGA...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | TCCTCTCCCAATCTGCTGGTGGCCTTTTTGTCTTATTaGCAGTGTCTTTTGCCTTACAGAAGCTTTGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSPNLLVAFLSY*QCLLPYRSFAV Trigger: AACTGCAAAGCTTCTGTAAGGCAAAAGACACTGTCAATAAGACAAAAAGGCCACCAGCAGATTGGGAGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | TCTTTCTCCACATCCTCACCAGCATCTTCTGTCAGCTaGATTTTTGATCTTAGCCATTCTGACTGGTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SFSTSSPASSVS*IFDLSHSDWCE Trigger: CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGCTGACAGAAGATGCTGGTGAGGATGTGGAGAAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | ATCTGTCCAGGCTCTTCTGGCTTTCATAGTCTCTGGTaGAAAATCTGGTGTAATTCTGATAGGCTTGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ICPGSSGFHSLW*KIWCNSDRLAF Trigger: AAAGGCAAGCCTATCAGAATTACACCAGATTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTGGACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | TGTCCTTATTACAAGTTGGAACATCTTCTGGGTATATaGCCAGGAGAGGTATTGCTGGACTTTCAGGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: CPYYKLEHLLGI*PGEVLLDFQVV Trigger: TACTACCTGAAAGTCCAGCAATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | ACTTGGTTGATTTCACCCCTGAGTTTGATTATTTCCTaGCGTCTACTCCTCTTGGGTGAATTTGCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TWLISPLSLIIS*RLLLLGEFASF Trigger: AAAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GTGTCGGGAGGAATTTCTTTTCTGGTCCAGTCTATTTaGAGTTCTGTAGGCTTCTTGTATGTTCATGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: VSGGISFLVQSI*SSVGFLYVHGY Trigger: ATACCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGATTCTTTCCAAGATATaGAGGCCACATTGGCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: STIIMRYAFKSRSRFSGVILSKI*RPHWPL Trigger: GAGGGGCCAATGTGGCCTCAATATCTTGGAAAGAAT...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGCTGTCAGCTGAATTTTaGATCTTAGCCATTCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: SSLGWNLCSLSVCITSVQLSAEF*ILAILT Trigger: AGTCAGAATGGCTAAGATCAAAAATTCAGCTGACAG...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | ACTGCAAAACTGATTTTTAGAGTGGTTGTACCAGCTTaGAATCCCACCAGCAATGGAAGAGTATTCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TAKLIFRVVVPA*NPTSNGRVFLF Trigger: AAAGAGGAATACTCTTCCATTGCTGGTGGGATTGCAAGCTGGTACAACCACTCTAAAAATCAGTTTTGCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | TATGAACACAGTGGAACATGTGTCCTTATTACAAGTTaGAACATCTTCTGGGTATATGCCCAGGAGAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: YEHSGTCVLITS*NIFWVYAQERY Trigger: ATACCTCTCCTGGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACATGTTCCACTGTGTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GTAATTGTGAGTTTGGCTGGGTATAGTAGCCTGGGCTaGAATTTGTGTTCTCTTAGTGTCTGTATAACATCT | + |
|
Preference number: 3 (lower is better) Translates to: VIVSLAGYSSLG*NLCSLSVCITS Trigger: AGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACTATACCCAGCCAAACTCACAATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGCTGGAGTCCGTCTTCTaGAGTTCTTTATATATATTG | + |
|
Preference number: 3 (lower is better) Translates to: SSLGWNLCSLSVCITSVQLESVF*SSLYIL Trigger: CAATATATATAAAGAACTCAAGAAGACGGACTCCAG...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGCATTTTCCATTTTCTTaGATTGTTGTGCCGATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLGWNLCSLSVCITSVQHFPFS*IVVPMF Trigger: GAACATCGGCACAACAATCAAAGAAAATGGAAAATG...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | GATATTGAGGCCACATTGGCCCCTCAGGTTTACTTATaGAATTTAGATTCATTAACCAAGGCTCTGTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: DIEATLAPQVYL*NLDSLTKALWY Trigger: ATACCACAGAGCCTTGGTTAATGAATCTAAATTTCATAAGTAAACCTGAGGGGCCAATGTGGCCTCAATATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | TTTAGGATTGATAAAGATCCTCTCCCAATCTGCTGGTaGCCTTTTTGTCTTATTGACAGTGTCTTTTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FRIDKDPLPICW*PFCLIDSVFCL Trigger: AAGGCAAAAGACACTGTCAATAAGACAAAAAGGCCACCAGCAGATTGGGAGAGGATCTTTATCAATCCTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | TATTTGGGTCACAAGGATGAATTACTGTACCATACATaGTTTACATCACAACTGCTGGTGTGGCATAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: YLGHKDELLYHT*FTSQLLVWHSI Trigger: AATGCTATGCCACACCAGCAGTTGTGATGTAAATCATGTATGGTACAGTAATTCATCCTTGTGACCCAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | GAAAGTGGTGTGTTGAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCTTTGAGCTTTACTAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: ESGVLKSPTIIV*GAMCALSFTKI Trigger: AATTTTAGTAAAGCTCAAAGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAACACACCACTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | AGATTCATTAACCAAGGCTCTGTGGTATTTATAGGGTaGCATTGGATGAAAGGCTATTATTTGACTATCACC | + |
|
Preference number: 3 (lower is better) Translates to: RFINQGSVVFIG*HWMKGYYLTIT Trigger: GGTGATAGTCAAATAATAGCCTTTCATCCAATGCCACCCTATAAATACCACAGAGCCTTGGTTAATGAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGGGACAAAGTCAATATTaGGAAAAGGTATTTGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: STIIMRYAFKSRSRFSGVGQSQY*EKVFGS Trigger: TGACCCAAATACCTTTTCCAAATATTGACTTTGTCC...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | GTGTTGAATAATAAACTTCATCTCTGTTCAATTGATTaGATGCCCCTTCAAACCAGTTTCACTGGCTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLNNKLHLCSID*MPLQTSFTGFD Trigger: ATCAAAGCCAGTGAAACTGGTTTGAAGGGGCATGCAATCAATTGAACAGAGATGAAGTTTATTATTCAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR GCA 72 bp | TCAGTTCTGATTTTGTTAATTAGGATTTTGTCCCTGTaGCCTTTAGTGAGTCTAGCTAAGGGTTTATCTATC | + |
|
Preference number: 3 (lower is better) Translates to: SVLILLIRILSL*PLVSLAKGLSI Trigger: GATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTCCCCCAAACTCTTTGTaGGAAATAATTAATCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ESTLLSSFFLSFMCFARCPPNSL*EIINLS Trigger: GGAAAGATTAATTATTTCCAACAAAGAGTTTGGGGG...ACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATAGGTTTGTGTTTATTTaGCATTTTGCAGAGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SKKERRIYTFVFVLLEFHRFVFI*HFAERE Trigger: TTCCCTCTCTGCAAAATGCAAAATAAACACAAACCT...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATTGTCCTTATTACAAGTaGGAACATCTTCTGGGTATA | + |
|
Preference number: 3 (lower is better) Translates to: SKKERRIYTFVFVLLEFHCPYYK*EHLLGI Trigger: TATACCCAGAAGATGTTCCAACTTGTAATAAGGACA...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR TCA 72 bp | GGTGTAATTCTGATAGGCTTGCCTTTGTATGTTACTTaGCCTTTTTCCCTTACTGCTTTTAGTATTCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: GVILIGLPLYVT*PFSLTAFSILS Trigger: AGATAGAATACTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATACAAAGGCAAGCCTATCAGAATTACACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | ATTCGTGGAGAGATAATGTGTGAATTTGGTTTTTCGTaGAATACTTTGGTTTCTCCATCTATGGTAATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IRGEIMCEFGFS*NTLVSPSMVIV Trigger: CACAATTACCATAGATGGAGAAACCAAAGTATTCCACGAAAAACCAAATTCACACATTATCTCTCCACGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CCA 72 bp | GTTATTTTTGTTGTTAAAGTTGGCATTCTGTTCTTGTaGCTGTCTTCTTTTAGGTTTGTTGAGGGATTACCT | + |
|
Preference number: 3 (lower is better) Translates to: VIFVVKVGILFL*LSSFRFVEGLP Trigger: AGGTAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAACTTTAACAACAAAAATAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR CCA 90 bp | CACCTGTCCTCTGGTCCGGACGGTGGCTGGCTGTCTGCGGCCCACCAAGGGTGCAAGTACATGGGACTGTaGAGCCCAGTGCTTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLSSGPDGGWLSAAHQGCKYMGL*SPVLEV Trigger: CACCTCAAGCACTGGGCTCCACAGTCCCATGTACTT...GCACCCTTGGTGGGCCGCAGACAGCCAGCCACCGTCCGGACCAGAGGACAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | TGGCGAGCTCTCTTACAGGGAAGGTGCGCAGATATCTaGTTTTTGGACCTCCTCCTGGTCGAAGAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRALLQGRCADI*FLDLLLVEEQG Trigger: GCCTTGTTCTTCGACCAGGAGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGAGCTCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGGAATCTTTCCGCTGTGCCCATATCTTTGAGGGAAAGCCTCCTTTTCGATCTTGGGGCCACAGAATaGCAGCCGTGTCATCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: FRNLSAVPISLRESLLFDLGATE*QPCHQT Trigger: GGTCTGATGACACGGCTGTCATTCTGTGGCCCCAAG...ATCGAAAAGGAGGCTTTCCCTCAAAGATATGGGCACAGCGGAAAGATTCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGAGCACTCTCTGCTGGCGAGCTCTCTTACAGGGAAGGTGCGCAGATATCTCCATGGTCGCTAAGTTaGACAGGAAAAAGTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LRALSAGELSYREGAQISPWSLS*TGKSTW Trigger: CCATGTACTTTTTCCTGTGCAACTTAGCGACCATGG...AGATATCTGCGCACCTTCCCTGTAAGAGAGCTCGCCAGCAGAGAGTGCTCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | GCTCTCTTACAGGGAAGGTGCGCAGATATCTTGTTTTaGGACCTCCTCCTGGTCGAAGAACAAGGCCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLQGRCADILF*DLLLVEEQGPK Trigger: TTTTGGGCCTTGTTCTTCGACCAGGAGGAGGTCCAAAAACAAGATATCTGCGCACCTTCCCTGTAAGAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTCTTCCTGTCCCTATCCTGTCCTGCAACTCTTCGTTCGAAAACCCTTTGTGGAGCCCAGTGCTTaGGGTGATCAAAGCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPSSCPYPVLQLFVRKPFVEPSA*GDQSND Trigger: ATCATTGCTTTGATCACCTCAAGCACTGGGCTCCAC...AAAGGGTTTTCGAACGAAGAGTTGCAGGACAGGATAGGGACAGGAAGAAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTCTTCCTGTCCCTATCCTGTCCTGCAACTCTTCGTTCGAAAACCCTTTAGCTGGAACCAGGACTaGTATAGGCACAGAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPSSCPYPVLQLFVRKPFSWNQD*YRHRTQ Trigger: CTGTGTTCTGTGCCTATATCAGTCCTGGTTCCAGCT...AAAGGGTTTTCGAACGAAGAGTTGCAGGACAGGATAGGGACAGGAAGAAGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | CTGTGCTTCTGCCTGTCCCAACCTGTCAGCAAAATCTaGCTGGCATATGCAATAGTGTCTGGGTTTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCFCLSQPVSKI*LAYAIVSGFGS Trigger: ACTACCAAACCCAGACACTATTGCATATGCCAGCAAGATTTTGCTGACAGGTTGGGACAGGCAGAAGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | GTCAAGCTGCTAGTATGTGCTCTCTCCCGTTTCTTCTaGGAGGCACTCAGAGCTATGAGTTTCCCTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKLLVCALSRFF*EALRAMSFPLR Trigger: TCTAAGAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGGAGAGAGCACATACTAGCAGCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR GCA 90 bp | CTCCCCTTTCTTCCTTTCTGTTATCACAGTGTTTTAGCCATGAGTGGTTGGTCAAGTCTTAGACTTGGGTaGTCTGAGAACCCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFLPFCYHSVLAMSGWSSLRLG*SENPCS Trigger: GCTGCAAGGGTTCTCAGAGCACCCAAGTCTAAGACT...TGACCAACCACTCATGGCTAAAACACTGTGATAACAGAAAGGAAGAAAGGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | TTGATTGCATGCCCCTTCAAACCAGTTTCACTGGCTTaGATGTCCACAGCACAGCTGGGAGCTGTGAAATTA | + |
|
Preference number: 4 (lower is better) Translates to: LIACPFKPVSLA*MSTAQLGAVKL Trigger: TAATTTCACAGCTCCCAGCTGTGCTGTGGACATCAAAGCCAGTGAAACTGGTTTGAAGGGGCATGCAATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | TTGTATATGGGATGGATCCCAAGGTGGGGCAGTCTCTaGATTGTCCTTTCTTCCATCTCAGCTCCAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYMGWIPRWGSL*IVLSSISAPNF Trigger: AAAGTTTGGAGCTGAGATGGAAGAAAGGACAATCAAGAGACTGCCCCACCTTGGGATCCATCCCATATACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | GTGAGTTTGGCTGGGTATAGTAGCCTGGGCTGGAATTaGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLAGYSSLGWN*CSLSVCITSVQ Trigger: CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACTATACCCAGCCAAACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | CTTCTTGTTTCCACTTGGTTGATTTCACCCCTGAGTTaGATTATTTCCTGCCGTCTACTCCTCTTGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVSTWLISPLS*IISCRLLLLGE Trigger: TTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR CCA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGAAATTTGCTTCTTTCTaGGCTGTAGCTGGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLSHSDWCEVESQGCFDLKFASF*AVAGTR Trigger: CCTGGTTCCAGCTACAGCCCAGAAAGAAGCAAATTT...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | TGTGTCGGGAGGAATTTCTTTTCTGGTCCAGTCTATTaGGAGTTCTGTAGGCTTCTTGTATGTTCATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CVGRNFFSGPVY*EFCRLLVCSWV Trigger: TACCCATGAACATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAGAAAAGAAATTCCTCCCGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| CDS-3UTR TCA 90 bp | TCTACCATCATCATGAGATATGCTTTTAAATCTAGGTCTAGGTTTTCGGGTGTGGAGTCATGCACCCTTTaGAGGAGATGGTGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: STIIMRYAFKSRSRFSGVESCTL*RRWCFP Trigger: AGGAAAACACCATCTCCTTCAAAGGGTGCATGACTC...CACACCCGAAAACCTAGACCTAGATTTAAAAGCATATCTCATGATGATGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
||
| 3UTR CAA 72 bp | CATCCACTCCTATTATCCGTAGGTTTGGTCTTCTCATaGTGTCCTGGATTTCCTGGATATTTTGAGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HPLLLSVGLVFS*CPGFPGYFELG Trigger: TCCTAACTCAAAATATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATAATAGGAGTGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | AATACTTTGGTTTCTCCATCTATGGTAATTGTGAGTTaGGCTGGGTATAGTAGCCTGGGCTGGAATTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: NTLVSPSMVIVS*AGYSSLGWNLC Trigger: ACACAAATTCCAGCCCAGGCTACTATACCCAGCCAAACTCACAATTACCATAGATGGAGAAACCAAAGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | CCTTTGATGAGAACGAAGTGCCCCTCCTTGTCTTTTTaGATGACTTTGGGTTGGAAGTCAATCTTATCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PLMRTKCPSLSF*MTLGWKSILSD Trigger: ATCTGATAAGATTGACTTCCAACCCAAAGTCATCAAAAAAGACAAGGAGGGGCACTTCGTTCTCATCAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | ATTCCTTCCTTGACCAAGGTATCATTGAGAAGAGTGTaGTTCAGTTTCCACGTGAGTGTTGGCTTTCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: IPSLTKVSLRRV*FSFHVSVGFLL Trigger: TAACAGAAAGCCAACACTCACGTGGAAACTGAACAACACTCTTCTCAATGATACCTTGGTCAAGGAAGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| CDS-3UTR TCA 90 bp | TCTAAGAAGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTTGAGTTTCATGGTTGGGCTGAGGACTaGGTACAAAACCGAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SKKERRIYTFVFVLLEFHGWAED*VQNRGK Trigger: TTTACCTCGGTTTTGTACTCAGTCCTCAGCCCAACC...ATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCTTCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | AATGTTCATTCTCATCCACTCCTATTATCCGTAGGTTaGGTCTTCTCATTGTGTCCTGGATTTCCTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: NVHSHPLLLSVG*VFSLCPGFPGY Trigger: ATATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATAATAGGAGTGGATGAGAATGAACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | TCTCCCTTTTCAGTTCTGATTTTGTTAATTAGGATTTaGTCCCTGTGCCCTTTAGTGAGTCTAGCTAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPFSVLILLIRI*SLCPLVSLAKG Trigger: ACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | GGATCTGTTGTTATGTCTCCCTTTTCAGTTCTGATTTaGTTAATTAGGATTTTGTCCCTGTGCCCTTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSVVMSPFSVLI*LIRILSLCPLV Trigger: CACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAACTGAAAAGGGAGACATAACAACAGATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | TATATATTGAATATTAGTCCCCTATCTGATTTAGGATaGATAAAGATCCTCTCCCAATCTGCTGGTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YILNISPLSDLG*IKILSQSAGGL Trigger: AAGGCCACCAGCAGATTGGGAGAGGATCTTTATCAATCCTAAATCAGATAGGGGACTAATATTCAATATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | AGGAACGAAGAATCTACACTTTTGTCTTCGTTCTTCTaGAGTTTCATGTGTTTTGCAAGATGTATCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RNEESTLLSSFF*SFMCFARCILG Trigger: ACCCAAGATACATCTTGCAAAACACATGAAACTCAAGAAGAACGAAGACAAAAGTGTAGATTCTTCGTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | CCTGTTATTTTTGTTGTTAAAGTTGGCATTCTGTTCTaGTGGCTGTCTTCTTTTAGGTTTGTTGAGGGATTA | + |
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Preference number: 4 (lower is better) Translates to: PVIFVVKVGILF*WLSSFRFVEGL Trigger: TAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAACTTTAACAACAAAAATAACAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | ACCTCACTCAGGATGATATCCTCCAGATCCATCCATTaGCCTAAGAATTTCATAAATTCACTGTTTTTAATT | + |
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Preference number: 4 (lower is better) Translates to: TSLRMISSRSIH*PKNFINSLFLI Trigger: AATTAAAAACAGTGAATTTATGAAATTCTTAGGCAAATGGATGGATCTGGAGGATATCATCCTGAGTGAGGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | TTCTTCTTGAGTTTCATGTGTTTTGCAAGATGTATCTaGGGTAGTCTAAGTTTCTGGGTTAATATCCACTTA | + |
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Preference number: 4 (lower is better) Translates to: FFLSFMCFARCI*GSLSFWVNIHL Trigger: TAAGTGGATATTAACCCAGAAACTTAGACTACCCAAGATACATCTTGCAAAACACATGAAACTCAAGAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | AATAATTTTGTTGAAGATGTTTGCTGGTCCTTTGAGTaGAAAATGTTCATTCTCATCCACTCCTATTATCCG | + |
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Preference number: 4 (lower is better) Translates to: NNFVEDVCWSFE*KMFILIHSYYP Trigger: CGGATAATAGGAGTGGATGAGAATGAACATTTTCAACTCAAAGGACCAGCAAACATCTTCAACAAAATTATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| 3UTR CAA 72 bp | TGTGTCTCCTGTAAACAGCAAAATGTTGGGTCTTGTTaGTGTAGACAGTTTGTTAGTCTATGTCTTTTTATT | + |
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Preference number: 4 (lower is better) Translates to: CVSCKQQNVGSC*CRQFVSLCLFI Trigger: AATAAAAAGACATAGACTAACAAACTGTCTACACAAACAAGACCCAACATTTTGCTGTTTACAGGAGACACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| CDS-3UTR CAA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACAGACCAACCAGCGCCTaGGGCAGTACAGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: PVQTNYLSSAESRNQDGDRPTSA*GSTEEV Trigger: CACCTCCTCTGTACTGCCCAAGGCGCTGGTTGGTCT...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| CDS-3UTR CAA 90 bp | CCTGTTCAGACTAATTACCTAAGTTCTGCTGAGTCCCGGAACCAAGATGGCGACGGAACAGTCTTAGACTaGGGTGCTCTGAGAACCCTT | + |
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Preference number: 5 (lower is better) Translates to: PVQTNYLSSAESRNQDGDGTVLD*GALRTL Trigger: AAGGGTTCTCAGAGCACCCAAGTCTAAGACTGTTCC...GTCGCCATCTTGGTTCCGGGACTCAGCAGAACTTAGGTAATTAGTCTGAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| CDS-3UTR CAA 90 bp | AGTAGCCTGGGCTGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGGCAATGATCACCATGTaGCCCATTAAAGCCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: SSLGWNLCSLSVCITSVQAMITM*PIKATV Trigger: CACAGTGGCTTTAATGGGCAACATGGTGATCATTGC...CTGGACAGATGTTATACAGACACTAAGAGAACACAAATTCCAGCCCAGGCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| CDS-3UTR CAA 90 bp | GATCTTAGCCATTCTGACTGGTGTGAGGTAGAATCTCAGGGTTGTTTTGATTTGTCCATGGTCGCTAAGTaGCACAGGAAAAAGTACATG | + |
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Preference number: 5 (lower is better) Translates to: DLSHSDWCEVESQGCFDLSMVAK*HRKKYM Trigger: CATGTACTTTTTCCTGTGCAACTTAGCGACCATGGA...CAAATCAAAACAACCCTGAGATTCTACCTCACACCAGTCAGAATGGCTAAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214180.2 |
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| CDS CAA 90 bp | CTGTGTACAGGGACAGGAAACAGCCCATCAGGAACAGTCTTAGACTaGGGTGCTCTGAGAACCCTTGCAGCACAAACTCTGTCACTACTG | + |
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Preference number: 6 (lower is better) Translates to: LCTGTGNSPSGTVLD*GALRTLAAQTLSLL Trigger: CAGTAGTGACAGAGTTTGTGCTGCAAGGGTTCTCAGAGCACCCAAGTCTAAGACTGTTCCTGATGGGCTGTTTCCTGTCCCTGTACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072655.3 ENSMUST00000211771.2 ENSMUST00000214180.2 |
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| CDS CAA 72 bp | ATGGTGTTTTCCTCAGACAGTAGACCAACCAGCGCCTaGGGCAGTACAGAGGAGGTGCAGATAATATCCATG | + |
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Preference number: 6 (lower is better) Translates to: MVFSSDSRPTSA*GSTEEVQIISM Trigger: CATGGATATTATCTGCACCTCCTCTGTACTGCCCAAGGCGCTGGTTGGTCTACTGTCTGAGGAAAACACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072655.3 ENSMUST00000211771.2 ENSMUST00000214180.2 |
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| CDS TCA 72 bp | TGTATAGATGAGGGGGTTGAGGGTTGGGCTGAGGACTaGGTACAAAACCGAGGTAAATTTGCTTCTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CIDEGVEGWAED*VQNRGKFASFW Trigger: CCAGAAAGAAGCAAATTTACCTCGGTTTTGTACTCAGTCCTCAGCCCAACCCTCAACCCCCTCATCTATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072655.3 ENSMUST00000211771.2 ENSMUST00000214180.2 |
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| CDS TCA 72 bp | ATTTGCTTCTTTCTGGGCTGTAGCTGGAACCAGGACTaGTATAGGCACAGAACACAGATGAGTAGTACACAG | + |
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Preference number: 6 (lower is better) Translates to: ICFFLGCSWNQD*YRHRTQMSSTQ Trigger: CTGTGTACTACTCATCTGTGTTCTGTGCCTATATCAGTCCTGGTTCCAGCTACAGCCCAGAAAGAAGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072655.3 ENSMUST00000211771.2 ENSMUST00000214180.2 |
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