Pregenerated sensors for OLFR459 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045479Ensembl transcript IDs: ENSMUST00000050412.5, ENSMUST00000214752.2, ENSMUST00000214976.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGTCCAGCATTGTCTTCCAAGTACTCTCCTGGTGGTTCACTCTCTaGGCACACTTGCCCCTCCCCCAGCCATTCTTTCTCTTGCACATG | + |
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Preference number: 1 (lower is better) Translates to: SSSIVFQVLSWWFTL*AHLPLPQPFFLLHM Trigger: CATGTGCAAGAGAAAGAATGGCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGAAGACAATGCTGGACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 90 bp | TTGCCCCTCCCCCAGCCATTCTTTCTCTTGCACATGCCAGCCCTGTaGCTTGATCTTCTGTCTTTCCCAGGTGTTAAAGTCTTTGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LPLPQPFFLLHMPAL*LDLLSFPGVKVFVP Trigger: TGGCACAAAGACTTTAACACCTGGGAAAGACAGAAGATCAAGCCACAGGGCTGGCATGTGCAAGAGAAAGAATGGCTGGGGGAGGGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR GCA 90 bp | CCCTGTGGCTTGATCTTCTGTCTTTCCCAGGTGTTAAAGTCTTTGTaGCAGGGAATGTGCTTGGTGAACCCTCATATGACCACTAACAAC | + |
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Preference number: 1 (lower is better) Translates to: PCGLIFCLSQVLKSL*QGMCLVNPHMTTNN Trigger: GTTGTTAGTGGTCATATGAGGGTTCACCAAGCACATTCCCTGGCACAAAGACTTTAACACCTGGGAAAGACAGAAGATCAAGCCACAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 90 bp | CTACTGCAGCCAATTTTCCATTTGATAAGCAGTGGATCTGAGAACTaGCTCAAATCTGGAGGCTGTGGGAAGGACCACCACTTTCCATTA | + |
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Preference number: 1 (lower is better) Translates to: LLQPIFHLISSGSEN*LKSGGCGKDHHFPL Trigger: TAATGGAAAGTGGTGGTCCTTCCCACAGCCTCCAGATTTGAGCCAGTTCTCAGATCCACTGCTTATCAAATGGAAAATTGGCTGCAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR TCA 90 bp | TCAAGCAATAGCCTCCTAAATAACACTTTTGAAAATTACCTTGCTTaGCAGACTATCCTGAAGGCCTCTGAGGAGCAGGATCAGCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: SSNSLLNNTFENYLA*QTILKASEEQDQLV Trigger: TACCAGCTGATCCTGCTCCTCAGAGGCCTTCAGGATAGTCTGTCAAGCAAGGTAATTTTCAAAAGTGTTATTTAGGAGGCTATTGCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 90 bp | AACACCTTCAACCTTCTCATTTACCCTTTGATTAGGTATTCTAAGTaGTACTCAAATGAGTGTCCTACCCATAGACATCATGTTCTATTA | + |
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Preference number: 1 (lower is better) Translates to: NTFNLLIYPLIRYSK*YSNECPTHRHHVLL Trigger: TAATAGAACATGATGTCTATGGGTAGGACACTCATTTGAGTACCACTTAGAATACCTAATCAAAGGGTAAATGAGAAGGTTGAAGGTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | ACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCCATTCTTGCCAGCCCTGTGGCTTaGTCTTCTGTCTTTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: TLLVVHSLSTLAPPPAILASPVA*SSVFPR Trigger: CCTGGGAAAGACAGAAGATCAAGCCACAGGGCTGGC...AAGAATGGCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCCATTCTTCCTTGGGGAGGAACTTaGAAGTATATCTTCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: TLLVVHSLSTLAPPPAILPWGGT*KYIFHD Trigger: GTCATGGAAGATATACTTCCAAGTTCCTCCCCAAGG...AAGAATGGCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCTCTTCTAATACTACTTaGAATCCCATAACTCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSSSNTT*NPITPK Trigger: CTTGGGAGTTATGGGATTTCAAGTAGTATTAGAAGA...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCTGTCTAACAAGTGAGTaGATAGGTTCATTTGCTAGT | + |
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Preference number: 2 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSCLTSE*IGSFAS Trigger: ACTAGCAAATGAACCTATTCACTCACTTGTTAGACA...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR GCA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCTCCAGAGGAAATATTTaGCATGTCACCATTCTAGAT | + |
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Preference number: 2 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSSRGNI*HVTILD Trigger: ATCTAGAATGGTGACATGGCAAATATTTCCTCTGGA...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | CTGTGTTTTCTTGCTCTGATTCATCCAGCGCTTTCAAGAACATTCTTCCTTGTGAGGCAGGCTGATTTCTaGGTTCCAGGCCAGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LCFLALIHPALSRTFFLVRQADF*VPGQPD Trigger: ATCAGGCTGGCCTGGAACTCAGAAATCAGCCTGCCT...CACAAGGAAGAATGTTCTTGAAAGCGCTGGATGAATCAGAGCAAGAAAACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTAGGCAGGCTGATTTCTaGGTTCCAGGCCAGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: KKRLQDLFSLSHRILLSVRQADF*VPGQPD Trigger: ATCAGGCTGGCCTGGAACTCAGAAATCAGCCTGCCT...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTCTTGACAGACTATCCTaGAGGCCTCTGAGGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KKRLQDLFSLSHRILLSVLDRLS*RPLRSR Trigger: CCTGCTCCTCAGAGGCCTTCAGGATAGTCTGTCAAG...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTTGACTACTGCAGATAAGCAGTGGATCTaGGAACTGGCTCAAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: TGSILTESQNTPFCLTTADKQWI*ELAQIW Trigger: CCAGATTTGAGCCAGTTCTCAGATCCACTGCTTATC...TGCAGTAGTCAAACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR GCA 90 bp | ACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTTGACTACTGCATTGTGCCAGGGAATGTaGTTGGTGAACCCTCATATG | + |
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Preference number: 2 (lower is better) Translates to: TGSILTESQNTPFCLTTALCQGM*LVNPHM Trigger: CATATGAGGGTTCACCAAGCACATTCCCTGGCACAA...TGCAGTAGTCAAACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CCA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTGAACTGGCTCAAATCTaGAGGCTGTGGGAAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: KKRLQDLFSLSHRILLSVELAQI*RLWEGP Trigger: TGGTCCTTCCCACAGCCTCCAGATTTGAGCCAGTTC...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTTGACTACTGCACCTTGGGGAGGAACTTaGAAGTATATCTTCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: TGSILTESQNTPFCLTTAPWGGT*KYIFHD Trigger: GTCATGGAAGATATACTTCCAAGTTCCTCCCCAAGG...TGCAGTAGTCAAACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGATTAGGTATTCTAAGTGGTACTCAAATGAGTGTCCTACCCATAGACATGTGTTAAAGTCTTTGTaGCAGGGAATGTGCTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PLIRYSKWYSNECPTHRHVLKSL*QGMCLV Trigger: CACCAAGCACATTCCCTGGCACAAAGACTTTAACAC...ATGTCTATGGGTAGGACACTCATTTGAGTACCACTTAGAATACCTAATCAAAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR TCA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTGAAGTATATCTTCCATaGCATGGTTGTAATTTGTGC | + |
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Preference number: 2 (lower is better) Translates to: KKRLQDLFSLSHRILLSVEVYLP*HGCNLC Trigger: GCACAAATTACAACCATGTCATGGAAGATATACTTC...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 90 bp | TTGTCTTTGTATTCTCTCAATGGTACCTCTTATACGTCAACATTTTaGCCATTACTCCTCTTCTCTAGGAAATACATCTTCAGAGTAATG | + |
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Preference number: 2 (lower is better) Translates to: LSLYSLNGTSYTSTF*PLLLFSRKYIFRVM Trigger: CATTACTCTGAAGATGTATTTCCTAGAGAAGAGGAGTAATGGCAAAAATGTTGACGTATAAGAGGTACCATTGAGAGAATACAAAGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR GCA 72 bp | AAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTaGCCCTCCCCCAGCCATTCTTTCTCTTGCACATGC | + |
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Preference number: 3 (lower is better) Translates to: KYSPGGSLSEHT*PSPSHSFSCTC Trigger: GCATGTGCAAGAGAAAGAATGGCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCCAAGGCCTCAGGAATTaGAAGTCAGAAATCTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSQGLRN*KSEILD Trigger: GTCTAAGATTTCTGACTTCAAATTCCTGAGGCCTTG...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CAA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCTTCCAGAGGAAATATTaGCCATGTCACCATTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSFQRKY*PCHHSR Trigger: TCTAGAATGGTGACATGGCAAATATTTCCTCTGGAA...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR GCA 72 bp | CTTTCCCAGGTGTTAAAGTCTTTGTGCCAGGGAATGTaGTTGGTGAACCCTCATATGACCACTAACAACCCG | + |
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Preference number: 3 (lower is better) Translates to: LSQVLKSLCQGM*LVNPHMTTNNP Trigger: CGGGTTGTTAGTGGTCATATGAGGGTTCACCAAGCACATTCCCTGGCACAAAGACTTTAACACCTGGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 72 bp | CCAATTTTCCATTTGATAAGCAGTGGATCTGAGAACTaGCTCAAATCTGGAGGCTGTGGGAAGGACCACCAC | + |
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Preference number: 3 (lower is better) Translates to: PIFHLISSGSEN*LKSGGCGKDHH Trigger: GTGGTGGTCCTTCCCACAGCCTCCAGATTTGAGCCAGTTCTCAGATCCACTGCTTATCAAATGGAAAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CAA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTTGCCAGGGAATGTGCTaGGTGAACCCTCATATGACC | + |
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Preference number: 3 (lower is better) Translates to: KKRLQDLFSLSHRILLSVCQGMC*VNPHMT Trigger: GGTCATATGAGGGTTCACCAAGCACATTCCCTGGCA...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTTGACTACTGCACAGGTGTTAAAGTCTTaGTGCCAGGGAATGTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: TGSILTESQNTPFCLTTAQVLKS*CQGMCL Trigger: CAAGCACATTCCCTGGCACAAAGACTTTAACACCTG...TGCAGTAGTCAAACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR TCA 72 bp | AGCCTCCTAAATAACACTTTTGAAAATTACCTTGCTTaGCAGACTATCCTGAAGGCCTCTGAGGAGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: SLLNNTFENYLA*QTILKASEEQD Trigger: ATCCTGCTCCTCAGAGGCCTTCAGGATAGTCTGTCAAGCAAGGTAATTTTCAAAAGTGTTATTTAGGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTTGACTACTGCAATGGAGAGAAGTCTTTaGCAAGGCCTCAGGAATTTG | + |
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Preference number: 3 (lower is better) Translates to: TGSILTESQNTPFCLTTAMERSL*QGLRNL Trigger: CAAATTCCTGAGGCCTTGCAAAAGACTTCTCTCCAT...TGCAGTAGTCAAACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR TCA 72 bp | AAATTATTTTATAAATGTGGGGCAATCCCACACAAATaGGAGGACTGGTTGCTGAAAGACCAAACTTACAGG | + |
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Preference number: 3 (lower is better) Translates to: KLFYKCGAIPHK*EDWLLKDQTYR Trigger: CCTGTAAGTTTGGTCTTTCAGCAACCAGTCCTCTCATTTGTGTGGGATTGCCCCACATTTATAAAATAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 72 bp | CAAGGCCTCAGGAATTTGAAGTCAGAAATCTTAGACTaGAATAAGTTTGAAGAGAAATGGCAGTTTTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: QGLRNLKSEILD*NKFEEKWQFSA Trigger: TGCTGAAAACTGCCATTTCTCTTCAAACTTATTCCAGTCTAAGATTTCTGACTTCAAATTCCTGAGGCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGATTAGGTATTCTAAGTGGTACTCAAATGAGTGTCCTACCCATAGACATGAAACATTAAAGTTCTaGAGTGTGGAGATAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: PLIRYSKWYSNECPTHRHETLKF*SVEIRL Trigger: AAGCCTTATCTCCACACTCAAGAACTTTAATGTTTC...ATGTCTATGGGTAGGACACTCATTTGAGTACCACTTAGAATACCTAATCAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 72 bp | AACCTTCTCATTTACCCTTTGATTAGGTATTCTAAGTaGTACTCAAATGAGTGTCCTACCCATAGACATCAT | + |
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Preference number: 3 (lower is better) Translates to: NLLIYPLIRYSK*YSNECPTHRHH Trigger: ATGATGTCTATGGGTAGGACACTCATTTGAGTACCACTTAGAATACCTAATCAAAGGGTAAATGAGAAGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CCA 72 bp | ACCAAATCGAACACGTTTGTCTTTGTATTCTCTCAATaGTACCTCTTATACGTCAACATTTTTGCCATTACT | + |
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Preference number: 3 (lower is better) Translates to: TKSNTFVFVFSQ*YLLYVNIFAIT Trigger: AGTAATGGCAAAAATGTTGACGTATAAGAGGTACCATTGAGAGAATACAAAGACAAACGTGTTCGATTTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR TCA 72 bp | ACACACACACACTTCAGATATGAAGGATCTACTGATTaGTGTCATGTAAATTTCTTCCTTCTAAACTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: THTHFRYEGSTD*CHVNFFLLNFF Trigger: GAAGAAGTTTAGAAGGAAGAAATTTACATGACATCAATCAGTAGATCCTTCATATCTGAAGTGTGTGTGTGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR TCA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCACATCCAGGACACCATaGCCACCCAGATGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSTSRTP*PPRCKC Trigger: GCACTTGCATCTGGGTGGTCATGGTGTCCTGGATGT...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCGGAAGAGTTGGGCAATaGATCCATTCAGAGATATTG | + |
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Preference number: 4 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSGRVGQ*IHSEIL Trigger: CAATATCTCTGAATGGATGCATTGCCCAACTCTTCC...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | TCCAAGTACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCAAGGCAGAATTCAGTTaGACTAGAGAGATTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SKYSPGGSLSEHTCPSPSKAEFS*TREIVH Trigger: ATGGACAATCTCTCTAGTGCAACTGAATTCTGCCTT...GCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGTACTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | ACTCTCCTGGTGGTTCACTCTCTGAGCACACTTGCCCCTCCCCCAGCCATTCTTAAGGCAGAATTCAGTTaGACTAGAGAGATTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TLLVVHSLSTLAPPPAILKAEFS*TREIVH Trigger: ATGGACAATCTCTCTAGTGCAACTGAATTCTGCCTT...AAGAATGGCTGGGGGAGGGGCAAGTGTGCTCAGAGAGTGAACCACCAGGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 72 bp | TCCCAGGTGTTAAAGTCTTTGTGCCAGGGAATGTGCTaGGTGAACCCTCATATGACCACTAACAACCCGGTT | + |
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Preference number: 4 (lower is better) Translates to: SQVLKSLCQGMC*VNPHMTTNNPV Trigger: AACCGGGTTGTTAGTGGTCATATGAGGGTTCACCAAGCACATTCCCTGGCACAAAGACTTTAACACCTGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR TCA 90 bp | CTGTGTTTTCTTGCTCTGATTCATCCAGCGCTTTCAAGAACATTCTTCCTTGTGACATCCAGGACACCATaGCCACCCAGATGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCFLALIHPALSRTFFLVTSRTP*PPRCKC Trigger: GCACTTGCATCTGGGTGGTCATGGTGTCCTGGATGT...CACAAGGAAGAATGTTCTTGAAAGCGCTGGATGAATCAGAGCAAGAAAACACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 72 bp | GGCTTGATCTTCTGTCTTTCCCAGGTGTTAAAGTCTTaGTGCCAGGGAATGTGCTTGGTGAACCCTCATATG | + |
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Preference number: 4 (lower is better) Translates to: GLIFCLSQVLKS*CQGMCLVNPHM Trigger: CATATGAGGGTTCACCAAGCACATTCCCTGGCACAAAGACTTTAACACCTGGGAAAGACAGAAGATCAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR TCA 90 bp | AGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGTCCCGTACATCCAGGACACCATaGCCACCCAGATGCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RVYYNSNGLGKLRFSRSRTSRTP*PPRCKC Trigger: GCACTTGCATCTGGGTGGTCATGGTGTCCTGGATGT...ACGGGACCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR TCA 90 bp | GATGCTAAGGAAACTGTGTTTTCTTGCTCTGATTCATCCAGCGCTTTCAAGAACCATTACAAGATAATTTaGGCAATTGGCCCCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: DAKETVFSCSDSSSAFKNHYKII*AIGPGR Trigger: GCGACCGGGGCCAATTGCTCAAATTATCTTGTAATG...GTTCTTGAAAGCGCTGGATGAATCAGAGCAAGAAAACACAGTTTCCTTAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR TCA 90 bp | TGCCCAGGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTCATTACAAGATAATTTaGGCAATTGGCCCCGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: CPGFRVYYNSNGLGKLRFHYKII*AIGPGR Trigger: GCGACCGGGGCCAATTGCTCAAATTATCTTGTAATG...AAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCCTGGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | GATGCTAAGGAAACTGTGTTTTCTTGCTCTGATTCATCCAGCGCTTTCAAGAACTCTGTTGTACTCTGCTaGCTGTGTTTGCTTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: DAKETVFSCSDSSSAFKNSVVLC*LCLLRF Trigger: AAACCTAAGCAAACACAGGCAGCAGAGTACAACAGA...GTTCTTGAAAGCGCTGGATGAATCAGAGCAAGAAAACACAGTTTCCTTAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | TGCCCAGGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTTCAGAGATATTGTCTaGTTTCCAGGGAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CPGFRVYYNSNGLGKLRFFRDIV*FPGSRS Trigger: GCTTCTGCTCCCTGGAAAGCAGACAATATCTCTGAA...AAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCCTGGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | TTGTGCCCAGGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGAGGAAGAGTTGGGCAATaGATCCATTCAGAGATATTG | + |
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Preference number: 4 (lower is better) Translates to: LCPGFRVYYNSNGLGKLRGRVGQ*IHSEIL Trigger: CAATATCTCTGAATGGATGCATTGCCCAACTCTTCC...TCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCCTGGGCACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | TTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGTCCTTCAGAGATATTGTCTaGTTTCCAGGGAGCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: FRVYYNSNGLGKLRFSRSFRDIV*FPGSRS Trigger: GCTTCTGCTCCCTGGAAAGCAGACAATATCTCTGAA...GGACCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | AGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGTCCCGTTCTGTTGTACTCTGCTaGCTGTGTTTGCTTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RVYYNSNGLGKLRFSRSRSVVLC*LCLLRF Trigger: AAACCTAAGCAAACACAGGCAGCAGAGTACAACAGA...ACGGGACCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | CCTTTGATTAGGTATTCTAAGTGGTACTCAAATGAGTGTCCTACCCATAGACATTCTGTTGTACTCTGCTaGCTGTGTTTGCTTAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PLIRYSKWYSNECPTHRHSVVLC*LCLLRF Trigger: AAACCTAAGCAAACACAGGCAGCAGAGTACAACAGA...ATGTCTATGGGTAGGACACTCATTTGAGTACCACTTAGAATACCTAATCAAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 72 bp | CTACCTGTAAAGATGGCTGATAGCCATTTGGGAAAGTaGAAGAAACGTTTACAGGATCTATTCTCACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: LPVKMADSHLGK*KKRLQDLFSLS Trigger: ACTCAGTGAGAATAGATCCTGTAAACGTTTCTTCAACTTTCCCAAATGGCTATCAGCCATCTTTACAGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | GGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGGGAAGAGTTGGGCAATaGATCCATTCAGAGATATTG | + |
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Preference number: 4 (lower is better) Translates to: GFRVYYNSNGLGKLRFSRGRVGQ*IHSEIL Trigger: CAATATCTCTGAATGGATGCATTGCCCAACTCTTCC...CCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 72 bp | TCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTaGACTACTGCAGCCAATTTTCCATTTGATAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SILTESQNTPFC*TTAANFPFDKQ Trigger: CTGCTTATCAAATGGAAAATTGGCTGCAGTAGTCAAACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR GCA 90 bp | CCAGGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAAGGCAGAATTCAGTTaGACTAGAGAGATTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: PGFRVYYNSNGLGKLRFSKAEFS*TREIVH Trigger: ATGGACAATCTCTCTAGTGCAACTGAATTCTGCCTT...AGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCCTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 72 bp | ATTACAGTGAACACCTTCAACCTTCTCATTTACCCTTaGATTAGGTATTCTAAGTGGTACTCAAATGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: ITVNTFNLLIYP*IRYSKWYSNEC Trigger: ACACTCATTTGAGTACCACTTAGAATACCTAATCAAAGGGTAAATGAGAAGGTTGAAGGTGTTCACTGTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| 3UTR CAA 72 bp | TGGAGCAAGACAAAATACATTCCTTTCACATCTAAGTaGTTTTTGTCAGGATCATTTATTACAGCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WSKTKYIPFTSK*FLSGSFITAAE Trigger: TTCTGCTGCTGTAATAAATGATCCTGACAAAAACAACTTAGATGTGAAAGGAATGTATTTTGTCTTGCTCCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | TTGTGCCCAGGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGAAGGGAGGCCACTCTGTaGTACTCTGCTGCCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: LCPGFRVYYNSNGLGKLRREATL*YSAACV Trigger: AACACAGGCAGCAGAGTACAACAGAGTGGCCTCCCT...TCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCCTGGGCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | GGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGAGGGAGGCCACTCTGTaGTACTCTGCTGCCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: GFRVYYNSNGLGKLRFSRREATL*YSAACV Trigger: AACACAGGCAGCAGAGTACAACAGAGTGGCCTCCCT...CCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | TCAACATTTTTGCCATTACTCCTCTTCTCTAGGAAATACATCTTCAGAGTAATGAGGGAGGCCACTCTGTaGTACTCTGCTGCCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: STFLPLLLFSRKYIFRVMREATL*YSAACV Trigger: AACACAGGCAGCAGAGTACAACAGAGTGGCCTCCCT...CATTACTCTGAAGATGTATTTCCTAGAGAAGAGGAGTAATGGCAAAAATGTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | TTGTGCCCAGGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGAATCCATTCAGAGATATaGTCTGCTTTCCAGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: LCPGFRVYYNSNGLGKLRIHSEI*SAFQGA Trigger: TGCTCCCTGGAAAGCAGACAATATCTCTGAATGGAT...TCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCCTGGGCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | AGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGTCCCGTCTCTGCTGCCTGTGTTaGCTTAGGTTTCACATAGAG | + |
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Preference number: 5 (lower is better) Translates to: RVYYNSNGLGKLRFSRSRLCCLC*LRFHIE Trigger: CTCTATGTGAAACCTAAGCAAACACAGGCAGCAGAG...ACGGGACCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTCTCTGCTGCCTGTGTTaGCTTAGGTTTCACATAGAG | + |
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Preference number: 5 (lower is better) Translates to: KKRLQDLFSLSHRILLSVLCCLC*LRFHIE Trigger: CTCTATGTGAAACCTAAGCAAACACAGGCAGCAGAG...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | GATGCTAAGGAAACTGTGTTTTCTTGCTCTGATTCATCCAGCGCTTTCAAGAACTCTCTAAGGGCCTCTTaGACTTTATCATTTCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: DAKETVFSCSDSSSAFKNSLRAS*TLSFRS Trigger: ACTTCGAAATGATAAAGTCAAAGAGGCCCTTAGAGA...GTTCTTGAAAGCGCTGGATGAATCAGAGCAAGAAAACACAGTTTCCTTAGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | AAGAAACGTTTACAGGATCTATTCTCACTGAGTCACAGAATACTCCTTTCTGTTATCCATTCAGAGATATaGTCTGCTTTCCAGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: KKRLQDLFSLSHRILLSVIHSEI*SAFQGA Trigger: TGCTCCCTGGAAAGCAGACAATATCTCTGAATGGAT...AACAGAAAGGAGTATTCTGTGACTCAGTGAGAATAGATCCTGTAAACGTTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | GGATTCAGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGATCCATTCAGAGATATaGTCTGCTTTCCAGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: GFRVYYNSNGLGKLRFSRIHSEI*SAFQGA Trigger: TGCTCCCTGGAAAGCAGACAATATCTCTGAATGGAT...CCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCTGAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | AGAGTTTACTACAACTCTAATGGACTAGGGAAATTGAGATTTTCTAGGTCCCGTTCTCTAAGGGCCTCTTaGACTTTATCATTTCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: RVYYNSNGLGKLRFSRSRSLRAS*TLSFRS Trigger: ACTTCGAAATGATAAAGTCAAAGAGGCCCTTAGAGA...ACGGGACCTAGAAAATCTCAATTTCCCTAGTCCATTAGAGTTGTAGTAAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS-3UTR CAA 90 bp | CTTGTGCTCACTAGTGTAAAGAATGAAGTCTGTAAGGTTCTAGTTATCATAAGATCTCTAAGGGCCTCTTaGACTTTATCATTTCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LVLTSVKNEVCKVLVIIRSLRAS*TLSFRS Trigger: ACTTCGAAATGATAAAGTCAAAGAGGCCCTTAGAGA...TCTTATGATAACTAGAACCTTACAGACTTCATTCTTTACACTAGTGAGCACAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS CAA 72 bp | CAGGGAGGCCACTCTGTTGTACTCTGCTGCCTGTGTTaGCTTAGGTTTCACATAGAGGAACAAGCAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: QGGHSVVLCCLC*LRFHIEEQAGA Trigger: GGCACCTGCTTGTTCCTCTATGTGAAACCTAAGCAAACACAGGCAGCAGAGTACAACAGAGTGGCCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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| CDS CAA 72 bp | AAAGGAAGAGTTGGGCAATGCATCCATTCAGAGATATaGTCTGCTTTCCAGGGAGCAGAAGCCCCCAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KGRVGQCIHSEI*SAFQGAEAPKA Trigger: TGCTTTGGGGGCTTCTGCTCCCTGGAAAGCAGACAATATCTCTGAATGGATGCATTGCCCAACTCTTCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050412.5 ENSMUST00000214752.2 ENSMUST00000214976.3 |
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