Pregenerated sensors for OLFR449 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049168Ensembl transcript IDs: ENSMUST00000050729.6, ENSMUST00000204072.4, ENSMUST00000204229.3, ENSMUST00000214687.3
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGGGACATCACGGAATCTTTTAACCTCAGAACTGTTTGTACTTaGAGGACCCAAATCAGGCCAAACCACACAACACCATATCACATC | + |
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Preference number: 1 (lower is better) Translates to: RRDITESFNLRTVCT*RTQIRPNHTTPYHI Trigger: GATGTGATATGGTGTTGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAAAGATTCCGTGATGTCCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | TTTAACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACACATCATGGACCAGAAGCTaGACAGCAGCTTGGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: FNLRTVCTCRTQIRPNHTSWTRS*TAAWAR Trigger: CCGTGCCCAAGCTGCTGTTCAGCTTCTGGTCCATGA...TGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | GAGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAATCATGGACCAGAAGCTaGACAGCAGCTTGGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: ERGHRTTEKSVFSFQSAKSWTRS*TAAWAR Trigger: CCGTGCCCAAGCTGCTGTTCAGCTTCTGGTCCATGA...TTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CCA 90 bp | AACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACACAACATTCATGTTGAAGGCATaGATAGCTCGGGGTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NLRTVCTCRTQIRPNHTTFMLKA*IARGRA Trigger: TGCCCGACCCCGAGCTATCCATGCCTTCAACATGAA...TGTTGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | AACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACACAACAAGATGCCAAAGCCAATaGCCCAGGAACCAAGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: NLRTVCTCRTQIRPNHTTRCQSQ*PRNQEL Trigger: TAGCTCTTGGTTCCTGGGTCATTGGCTTTGGCATCT...TGTTGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CCA 90 bp | TCTTTTAACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACTTCATGTTGAAGGCATaGATAGCTCGGGGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFNLRTVCTCRTQIRPNHFMLKA*IARGRA Trigger: TGCCCGACCCCGAGCTATCCATGCCTTCAACATGAA...GTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | TTTAACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACACAAGAGTCCATGGCTCATaGTGGTGGGGTAGTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: FNLRTVCTCRTQIRPNHTRVHGS*WWGSVM Trigger: CATTACACTACCCCACCATCATGAGCCATGGACTCT...TGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | CTTGCAGGACCCAAATCAGGCCAAACCACACAACACCATATCACATCTTGTTTACATCAGGAATACAGCTaGTCTCATGCTCAAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LAGPKSGQTTQHHITSCLHQEYS*SHAQAP Trigger: GGGAGCTTGAGCATGAGAGCAGCTGTATTCCTGATG...TAAACAAGATGTGATATGGTGTTGTGTGGTTTGGCCTGATTTGGGTCCTGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | ACCAATGATCTTGAGCTAGGGCATCGAAAGAGAGAGGACATAGGACAACAGAGAAAAGTCCACCAGCTCTaGAATGGACATGTCTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TNDLELGHRKREDIGQQRKVHQL*NGHVCA Trigger: TGCACAGACATGTCCATTGCAGAGCTGGTGGACTTT...TCTCTGTTGTCCTATGTCCTCTCTCTTTCGATGCCCTAGCTCAAGATCATTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CCA 90 bp | TCTTTTAACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACGCATGCGTAACACAGTaGCCAGAATGCATCCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SFNLRTVCTCRTQIRPNHACVTQ*PECIRM Trigger: CATACGGATGCATTCTGGCCACTGTGTTACGCATGC...GTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CCA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGTTCATGTTGAAGGCATaGATAGCTCGGGGTCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEFMLKA*IARGRA Trigger: TGCCCGACCCCGAGCTATCCATGCCTTCAACATGAA...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGATACAGCTGCTCTCATaGTCAAGCTCCCAGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEIQLLS*SSSQET Trigger: GGTTTCCTGGGAGCTTGAGCATGAGAGCAGCTGTAT...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAATACAGCTGCTCTCATaGTCAAGCTCCCAGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: ERGHRTTEKSVFSFQSAKIQLLS*SSSQET Trigger: GGTTTCCTGGGAGCTTGAGCATGAGAGCAGCTGTAT...TTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGCATCAGGAATACAGCTaGTCTCATGCTCAAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEHQEYS*SHAQAP Trigger: GGGAGCTTGAGCATGAGAGCAGCTGTATTCCTGATG...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | AGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAAGAGTCCATGGCTCATaGTGGTGGGGTAGTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: REDIGQQRSQSFLSNQPKRVHGS*WWGSVM Trigger: CATTACACTACCCCACCATCATGAGCCATGGACTCT...TTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | AGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAAGATGCCAAAGCCAATaGCCCAGGAACCAAGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGHRTTEKSVFSFQSAKRRCQSQ*PRNQEL Trigger: TAGCTCTTGGTTCCTGGGTCATTGGCTTTGGCATCT...TCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | AAGAGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAGTGGTCGGTTCTGTTaGACCAGTAGGATGATGATC | + |
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Preference number: 4 (lower is better) Translates to: KREDIGQQRSQSFLSNQPSGRFC*TSRMMI Trigger: GATCATCATCCTACTGGTGCAACAGAACCGACCACT...TGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | ACCAATGATCTTGAGCTAGGGCATCGAAAGAGAGAGGACATAGGACAACAGAGAGATGAAGTAGATCTTTaGCAAAGAGATGCCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TNDLELGHRKREDIGQQRDEVDL*QRDAKA Trigger: GGCTTTGGCATCTCTTTGGCAAAGATCTACTTCATC...TCTCTGTTGTCCTATGTCCTCTCTCTTTCGATGCCCTAGCTCAAGATCATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGAAAGTCCACCAGCTCTaGAATGGACATGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEKVHQL*NGHVCA Trigger: TGCACAGACATGTCCATTGCAGAGCTGGTGGACTTT...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAAAGTCCACCAGCTCTaGAATGGACATGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERGHRTTEKSVFSFQSAKKVHQL*NGHVCA Trigger: TGCACAGACATGTCCATTGCAGAGCTGGTGGACTTT...TTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CCA 90 bp | AGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGCATGCGTAACACAGTaGCCAGAATGCATCCGTATG | + |
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Preference number: 4 (lower is better) Translates to: RGHRTTEKSVFSFQSAKRACVTQ*PECIRM Trigger: CATACGGATGCATTCTGGCCACTGTGTTACGCATGC...TCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | ACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACACAACACGTATCATACAGTGAGTaGAAGAAATGCTGTTACTCA | + |
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Preference number: 4 (lower is better) Translates to: TSELFVLAGPKSGQTTQHVSYSE*KKCCYS Trigger: TGAGTAACAGCATTTCTTTCACTCACTGTATGATAC...GTGTTGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | AGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAAGTGGTCGGTTCTGTTaGACCAGTAGGATGATGATC | + |
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Preference number: 4 (lower is better) Translates to: RGHRTTEKSVFSFQSAKRSGRFC*TSRMMI Trigger: GATCATCATCCTACTGGTGCAACAGAACCGACCACT...TCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | TCTTTTAACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACGATGAAGTAGATCTTTaGCAAAGAGATGCCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: SFNLRTVCTCRTQIRPNHDEVDL*QRDAKA Trigger: GGCTTTGGCATCTCTTTGGCAAAGATCTACTTCATC...GTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGGATGAAGTAGATCTTTaGCAAAGAGATGCCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEDEVDL*QRDAKA Trigger: GGCTTTGGCATCTCTTTGGCAAAGATCTACTTCATC...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | TCTTTTAACCTCAGAACTGTTTGTACTTGCAGGACCCAAATCAGGCCAAACCACGTATCATACAGTGAGTaGAAGAAATGCTGTTACTCA | + |
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Preference number: 4 (lower is better) Translates to: SFNLRTVCTCRTQIRPNHVSYSE*KKCCYS Trigger: TGAGTAACAGCATTTCTTTCACTCACTGTATGATAC...GTGGTTTGGCCTGATTTGGGTCCTGCAAGTACAAACAGTTCTGAGGTTAAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | GAACAGATCTCATGCACAAATATATACAAGTGCCAAGATTGTTGTGTACATGATAGAGTCCATGGCTCATaGTGGTGGGGTAGTGTAATG | + |
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Preference number: 4 (lower is better) Translates to: EQISCTNIYKCQDCCVHDRVHGS*WWGSVM Trigger: CATTACACTACCCCACCATCATGAGCCATGGACTCT...ATCATGTACACAACAATCTTGGCACTTGTATATATTTGTGCATGAGATCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | AGAGAACAGATCTCATGCACAAATATATACAAGTGCCAAGATTGTTGTGTACATAGATGCCAAAGCCAATaGCCCAGGAACCAAGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: REQISCTNIYKCQDCCVHRCQSQ*PRNQEL Trigger: TAGCTCTTGGTTCCTGGGTCATTGGCTTTGGCATCT...ATGTACACAACAATCTTGGCACTTGTATATATTTGTGCATGAGATCTGTTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | AGAGAACAGATCTCATGCACAAATATATACAAGTGCCAAGATTGTTGTGTACATATACAGCTGCTCTCATaGTCAAGCTCCCAGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: REQISCTNIYKCQDCCVHIQLLS*SSSQET Trigger: GGTTTCCTGGGAGCTTGAGCATGAGAGCAGCTGTAT...ATGTACACAACAATCTTGGCACTTGTATATATTTGTGCATGAGATCTGTTCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR TCA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGGTATCATACAGTGAGTaGAAGAAATGCTGTTACTCA | + |
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Preference number: 4 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEVSYSE*KKCCYS Trigger: TGAGTAACAGCATTTCTTTCACTCACTGTATGATAC...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR GCA 90 bp | GAACAGATCTCATGCACAAATATATACAAGTGCCAAGATTGTTGTGTACATGATAGTGGTCGGTTCTGTTaGACCAGTAGGATGATGATC | + |
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Preference number: 4 (lower is better) Translates to: EQISCTNIYKCQDCCVHDSGRFC*TSRMMI Trigger: GATCATCATCCTACTGGTGCAACAGAACCGACCACT...ATCATGTACACAACAATCTTGGCACTTGTATATATTTGTGCATGAGATCTGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| 3UTR CAA 72 bp | TATATAATGTACAATTCACTTTATAAAAGCTTGCTCTaGCTAGCAGAAAGGGTGCTACTCAAGGAGTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: YIMYNSLYKSLL*LAERVLLKEWY Trigger: GTACCACTCCTTGAGTAGCACCCTTTCTGCTAGCAAGAGCAAGCTTTTATAAAGTGAATTGTACATTATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| 3UTR CAA 72 bp | TATGATTATATAATGTACAATTCACTTTATAAAAGCTaGCTCTTGCTAGCAGAAAGGGTGCTACTCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: YDYIMYNSLYKS*LLLAERVLLKE Trigger: CTCCTTGAGTAGCACCCTTTCTGCTAGCAAGAGCAAGCTTTTATAAAGTGAATTGTACATTATATAATCATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CAA 90 bp | ACTTGCAGGACCCAAATCAGGCCAAACCACACAACACCATATCACATCTTGTTTAAGAAGTACATAGGCTaGTGTAGTGGTCGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TCRTQIRPNHTTPYHILFKKYIG*CSGRFC Trigger: ACAGAACCGACCACTACACAAGCCTATGTACTTCTT...AAACAAGATGTGATATGGTGTTGTGTGGTTTGGCCTGATTTGGGTCCTGCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAGAAGTACATAGGCTaGTGTAGTGGTCGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: KREDIGQQRSQSFLSNQPKKYIG*CSGRFC Trigger: ACAGAACCGACCACTACACAAGCCTATGTACTTCTT...TGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CAA 90 bp | GAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAGAAGAAGTACATAGGCTaGTGTAGTGGTCGGTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: EDIGQQRSQSFLSNQPKEKKYIG*CSGRFC Trigger: ACAGAACCGACCACTACACAAGCCTATGTACTTCTT...CTCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CAA 90 bp | GAGAGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAATAACTTTGTTCATGTaGAAGGCATGGATAGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: ERGHRTTEKSVFSFQSAKITLFM*KAWIAR Trigger: CCGAGCTATCCATGCCTTCAACATGAACAAAGTTAT...TTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS-3UTR CAA 90 bp | AGAGGACATAGGACAACAGAGAAGTCAGTCTTTTCTTTCCAATCAGCCAAAAGAATAACTTTGTTCATGTaGAAGGCATGGATAGCTCGG | + |
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Preference number: 5 (lower is better) Translates to: RGHRTTEKSVFSFQSAKRITLFM*KAWIAR Trigger: CCGAGCTATCCATGCCTTCAACATGAACAAAGTTAT...TCTTTTGGCTGATTGGAAAGAAAAGACTGACTTCTCTGTTGTCCTATGTCCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000214687.3 |
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| CDS CAA 72 bp | ATGCTGTTACTCATGGACCAGAAGCTGAACAGCAGCTaGGGCACGGTAACAGAGATGTACCAGGTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: MLLLMDQKLNSS*GTVTEMYQVSK Trigger: CTTGGAGACCTGGTACATCTCTGTTACCGTGCCCAAGCTGCTGTTCAGCTTCTGGTCCATGAGTAACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000204229.3 ENSMUST00000214687.3 |
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| CDS CAA 90 bp | GTGAAAGAAATGCTGTTACTCATGGACCAGAAGCTGAACAGCAGCTaGGGCACGGTAACAGAGATGTACCAGGTCTCCAAGAAAGACAGG | + |
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Preference number: 6 (lower is better) Translates to: VKEMLLLMDQKLNSS*GTVTEMYQVSKKDR Trigger: CCTGTCTTTCTTGGAGACCTGGTACATCTCTGTTACCGTGCCCAAGCTGCTGTTCAGCTTCTGGTCCATGAGTAACAGCATTTCTTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000204229.3 ENSMUST00000214687.3 |
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| CDS GCA 72 bp | AAGAAGTACATAGGCTTGTGTAGTGGTCGGTTCTGTTaGACCAGTAGGATGATGATCACGTTTTCAGCTACA | + |
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Preference number: 6 (lower is better) Translates to: KKYIGLCSGRFC*TSRMMITFSAT Trigger: TGTAGCTGAAAACGTGATCATCATCCTACTGGTGCAACAGAACCGACCACTACACAAGCCTATGTACTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050729.6 ENSMUST00000204072.4 ENSMUST00000204229.3 ENSMUST00000214687.3 |
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