RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR448 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000043119

Ensembl transcript IDs: ENSMUST00000213952.3, ENSMUST00000214529.2

Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGTaGCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATA +
Preference number: 1 (lower is better)
Translates to: GLVIYSVQTTICFPW*LYPVHYFFTLIQFI
Trigger: TATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CCA 90 bp TTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTaGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTT +
Preference number: 1 (lower is better)
Translates to: FGLVIYSVQTTICFP*CLYPVHYFFTLIQF
Trigger: AAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR GCA 90 bp TATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGCAATTaGAATACTGGTGAACTGCCACCCTTATCACTTTGTAATGGGAAT +
Preference number: 1 (lower is better)
Translates to: YPVHYFFTLIQFICN*NTGELPPLSLCNGN
Trigger: ATTCCCATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR GCA 90 bp TCTTCACCCTTATACAGTTTATATGCAATTGCAATACTGGTGAACTaGCACCCTTATCACTTTGTAATGGGAATTTCTCAAAAGCCTTCT +
Preference number: 1 (lower is better)
Translates to: SSPLYSLYAIAILVN*HPYHFVMGISQKPS
Trigger: AGAAGGCTTTTGAGAAATTCCCATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTGTATAAGGGTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR GCA 90 bp ACAGTGTTCAAACAACTATCTGTTTTCCTTGGTGCCTTTATCCTGTaGACTACTTCTTCACCCTTATACAGTTTATATGCAATTGCAATA +
Preference number: 1 (lower is better)
Translates to: TVFKQLSVFLGAFIL*TTSSPLYSLYAIAI
Trigger: TATTGCAATTGCATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGAAAACAGATAGTTGTTTGAACACTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR TCA 90 bp ATTCCTAAAAGTCCTGTTGTTATACTTATTGTATCTTTGGTCTGGTaGTCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGTGCCTTT +
Preference number: 1 (lower is better)
Translates to: IPKSPVVILIVSLVW*STVFKQLSVFLGAF
Trigger: AAAGGCACCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACAATAAGTATAACAACAGGACTTTTAGGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR TCA 90 bp AGTTTGAACTGGGATGAGATTAAATTACATCTCTTGAACATCTCTTaGGTGTGTTTCTCCCACAGAGCCTTAACTGTTTTGACTATAATA +
Preference number: 1 (lower is better)
Translates to: SLNWDEIKLHLLNIS*VCFSHRALTVLTII
Trigger: TATTATAGTCAAAACAGTTAAGGCTCTGTGGGAGAAACACACTCAAGAGATGTTCAAGAGATGTAATTTAATCTCATCCCAGTTCAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGCTGGTTCCTGTGCTTTaGTGCCTCCTGACTCTTTGT +
Preference number: 2 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMLVPVL*CLLTLC
Trigger: ACAAAGAGTCAGGAGGCAGCAAAGCACAGGAACCAG...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGTCCATCCCTAGTCCTTaGTACATTCTCAGTAGGGGT +
Preference number: 2 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMSIPSP*YILSRG
Trigger: ACCCCTACTGAGAATGTAGCAAGGACTAGGGATGGA...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR TCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGTGCTTTGCTGCCTCCTaGCTCTTTGTAATCTGTACC +
Preference number: 2 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWCFAAS*LFVICT
Trigger: GGTACAGATTACAAAGAGTCAGGAGGCAGCAAAGCA...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGGTTCCTGTGCTTTGCTaGCTCCTGACTCTTTGTAAT +
Preference number: 2 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMVPVLC*LLTLCN
Trigger: ATTACAAAGAGTCAGGAGGCAGCAAAGCACAGGAAC...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTCTGGTTCCTGTGCTTTaGTGCCTCCTGACTCTTTGT +
Preference number: 2 (lower is better)
Translates to: INPKALSYSNYRGPEMHTLVPVL*CLLTLC
Trigger: ACAAAGAGTCAGGAGGCAGCAAAGCACAGGAACCAG...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGACCTCTGTGCCTTTCTaGCTGTGCTTTGGAATTTGG +
Preference number: 2 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWTSVPF*LCFGIW
Trigger: CCAAATTCCAAAGCACAGCCAGAAAGGCACAGAGGT...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CAA 90 bp CTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTaGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTT +
Preference number: 2 (lower is better)
Translates to: LWSGDLQCSNNYLFS*VPLSCALLLHPYTV
Trigger: AACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR TCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTTGCTTTGCTGCCTCCTaGCTCTTTGTAATCTGTACC +
Preference number: 2 (lower is better)
Translates to: INPKALSYSNYRGPEMHTCFAAS*LFVICT
Trigger: GGTACAGATTACAAAGAGTCAGGAGGCAGCAAAGCA...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGGTTCCTGTGCTTTGCTaGCTCCTGACTCTTTGTAAT +
Preference number: 2 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWVPVLC*LLTLCN
Trigger: ATTACAAAGAGTCAGGAGGCAGCAAAGCACAGGAAC...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp CAGACCAGCCAGCAAAATAATACTATAGAAGAGAAAGTGAAAGGAAAAGTTTCCTCCATCCCTAGTCCTTaGTACATTCTCAGTAGGGGT +
Preference number: 2 (lower is better)
Translates to: QTSQQNNTIEEKVKGKVSSIPSP*YILSRG
Trigger: ACCCCTACTGAGAATGTAGCAAGGACTAGGGATGGA...GGAAACTTTTCCTTTCACTTTCTCTTCTATAGTATTATTTTGCTGGCTGGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTACCTCTGTGCCTTTCTaGCTGTGCTTTGGAATTTGG +
Preference number: 2 (lower is better)
Translates to: INPKALSYSNYRGPEMHTTSVPF*LCFGIW
Trigger: CCAAATTCCAAAGCACAGCCAGAAAGGCACAGAGGT...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATGAAATTCATGACTCCTaGTTCCTGTGCTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: QFICNCNTGELPPLSLCNEIHDS*FLCFAA
Trigger: GGCAGCAAAGCACAGGAACCAGGAGTCATGAATTTC...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CCA 90 bp AGAGGTATATACTGGAGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCGAAATTCATGACTCCTaGTTCCTGTGCTTTGCTGCC +
Preference number: 2 (lower is better)
Translates to: RGIYWSSICIGSLAYIYVEIHDS*FLCFAA
Trigger: GGCAGCAAAGCACAGGAACCAGGAGTCATGAATTTC...GACATAAATGTATGCTAAAGAGCCTATACATATGCTGCTCCAGTATATACCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp CAGACCAGCCAGCAAAATAATACTATAGAAGAGAAAGTGAAAGGAAAAGTTTCCATCTGTTTTCCTTGGTaGCTTTATCCTGTGCACTAC +
Preference number: 2 (lower is better)
Translates to: QTSQQNNTIEEKVKGKVSICFPW*LYPVHY
Trigger: GTAGTGCACAGGATAAAGGCACCAAGGAAAACAGAT...GGAAACTTTTCCTTTCACTTTCTCTTCTATAGTATTATTTTGCTGGCTGGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTACTATCTGTTTTCCTTaGTGCCTTTATCCTGTGCAC +
Preference number: 2 (lower is better)
Translates to: INPKALSYSNYRGPEMHTTICFP*CLYPVH
Trigger: GTGCACAGGATAAAGGCACCAAGGAAAACAGATAGT...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CAA 90 bp CCAGAAATGCATACTTCCATCACCCGGGGTACATGTCTATGGAACTaGATAAGATTCCTAAAAGTCCTGTTGTTATACTTATTGTATCTT +
Preference number: 2 (lower is better)
Translates to: PEMHTSITRGTCLWN*IRFLKVLLLYLLYL
Trigger: AAGATACAATAAGTATAACAACAGGACTTTTAGGAATCTTATCAAGTTCCATAGACATGTACCCCGGGTGATGGAAGTATGCATTTCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR TCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGATCAGTATATACTCATaGCTTCAGAAACCTACGAGA +
Preference number: 2 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWISIYS*LQKPTR
Trigger: TCTCGTAGGTTTCTGAAGTCATGAGTATATACTGAT...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CAA 90 bp ATTGTAGAGATAATTGCAAGAGACAAGATGTTTTTCCCAGGTGAGTaGAAAGTGCAGACCAGCCAGCAAAATAATACTATAGAAGAGAAA +
Preference number: 2 (lower is better)
Translates to: IVEIIARDKMFFPGE*KVQTSQQNNTIEEK
Trigger: TTTCTCTTCTATAGTATTATTTTGCTGGCTGGTCTGCACTTTCAACTCACCTGGGAAAAACATCTTGTCTCTTGCAATTATCTCTACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp AGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCAATAAGGAAGATGGAGTGCCTTTCTGGCTGTaGTTTGGAATTTGGTTATTT +
Preference number: 2 (lower is better)
Translates to: SSICIGSLAYIYVNKEDGVPFWL*FGIWLF
Trigger: AAATAACCAAATTCCAAAGCACAGCCAGAAAGGCAC...TCCATCTTCCTTATTGACATAAATGTATGCTAAAGAGCCTATACATATGCTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR TCA 90 bp AGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCAATAAGGAAGATGGAATCAGTATATACTCATaGCTTCAGAAACCTACGAGA +
Preference number: 2 (lower is better)
Translates to: SSICIGSLAYIYVNKEDGISIYS*LQKPTR
Trigger: TCTCGTAGGTTTCTGAAGTCATGAGTATATACTGAT...TCCATCTTCCTTATTGACATAAATGTATGCTAAAGAGCCTATACATATGCTGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATGATGCGTATTTATGCTaGATTGTTAGAGGTATATAC +
Preference number: 2 (lower is better)
Translates to: QFICNCNTGELPPLSLCNDAYLC*IVRGIY
Trigger: GTATATACCTCTAACAATGCAGCATAAATACGCATC...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR GCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTCAAGATGCGTATTTATaGTGCATTGTTAGAGGTATA +
Preference number: 2 (lower is better)
Translates to: INPKALSYSNYRGPEMHTQDAYL*CIVRGI
Trigger: TATACCTCTAACAATGCAGCATAAATACGCATCTTG...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTTACTTATTGTATCTTTaGTCTGGTGATCTACAGTGT +
Preference number: 2 (lower is better)
Translates to: INPKALSYSNYRGPEMHTYLLYL*SGDLQC
Trigger: ACACTGTAGATCACCAGACCAAAGATACAATAAGTA...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR TCA 72 bp ATTCATGACTCCTGGTTCCTGTGCTTTGCTGCCTCCTaGCTCTTTGTAATCTGTACCTCTGTGCCTTTCTGG +
Preference number: 3 (lower is better)
Translates to: IHDSWFLCFAAS*LFVICTSVPFW
Trigger: CCAGAAAGGCACAGAGGTACAGATTACAAAGAGTCAGGAGGCAGCAAAGCACAGGAACCAGGAGTCATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR GCA 72 bp AGCCATGCATCAGGTTCTCCCTCCATCCCTAGTCCTTaGTACATTCTCAGTAGGGGTTGCTTAATCAAGATG +
Preference number: 3 (lower is better)
Translates to: SHASGSPSIPSP*YILSRGCLIKM
Trigger: CATCTTGATTAAGCAACCCCTACTGAGAATGTAGCAAGGACTAGGGATGGAGGGAGAACCTGATGCATGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR TCA 72 bp ATCTTATACGGTTCTGGAAGAGACAGGAGAAATTCATaGCTCCTGGTTCCTGTGCTTTGCTGCCTCCTGACT +
Preference number: 3 (lower is better)
Translates to: ILYGSGRDRRNS*LLVPVLCCLLT
Trigger: AGTCAGGAGGCAGCAAAGCACAGGAACCAGGAGTCATGAATTTCTCCTGTCTCTTCCAGAACCGTATAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CAA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTCCTGGTTCCTGTGCTTaGCTGCCTCCTGACTCTTTG +
Preference number: 3 (lower is better)
Translates to: INPKALSYSNYRGPEMHTPGSCA*LPPDSL
Trigger: CAAAGAGTCAGGAGGCAGCAAAGCACAGGAACCAGG...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR GCA 72 bp AGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATaGATACTTCCATCACCCGGGGTACATGTCTATGGA +
Preference number: 3 (lower is better)
Translates to: RLFHILTIEAQK*ILPSPGVHVYG
Trigger: TCCATAGACATGTACCCCGGGTGATGGAAGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CAA 90 bp CTTATACGGTTCTGGAAGAGACAGGAGAAATTCATGACTCCTGGTTCCTGTGCTCTTTCTGGCTGTGCTTaGGAATTTGGTTATTTGGTA +
Preference number: 3 (lower is better)
Translates to: LIRFWKRQEKFMTPGSCALSGCA*EFGYLV
Trigger: TACCAAATAACCAAATTCCAAAGCACAGCCAGAAAG...AGCACAGGAACCAGGAGTCATGAATTTCTCCTGTCTCTTCCAGAACCGTATAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CAA 90 bp AGAGGTATATACTGGAGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCCTTTCTGGCTGTGCTTaGGAATTTGGTTATTTGGTA +
Preference number: 3 (lower is better)
Translates to: RGIYWSSICIGSLAYIYVLSGCA*EFGYLV
Trigger: TACCAAATAACCAAATTCCAAAGCACAGCCAGAAAG...GACATAAATGTATGCTAAAGAGCCTATACATATGCTGCTCCAGTATATACCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CAA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGCGTATTTATGCTGCATaGTTAGAGGTATATACTGGA +
Preference number: 3 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWRIYAA*LEVYTG
Trigger: TCCAGTATATACCTCTAACAATGCAGCATAAATACG...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR TCA 72 bp GTGAATGTCACTAATGCTAGAAGGATAGAGAAGGAGTaGATGGTCATAGAAACTGACTGTGTTAAAGAAATC +
Preference number: 3 (lower is better)
Translates to: VNVTNARRIEKE*MVIETDCVKEI
Trigger: GATTTCTTTAACACAGTCAGTTTCTATGACCATTCACTCCTTCTCTATCCTTCTAGCATTAGTGACATTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CAA 90 bp AGAGGTATATACTGGAGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCTTGGAATTTGGTTATTaGGTAAATAGGGGAAAACCC +
Preference number: 3 (lower is better)
Translates to: RGIYWSSICIGSLAYIYVLEFGY*VNRGKP
Trigger: GGGTTTTCCCCTATTTACCAAATAACCAAATTCCAA...GACATAAATGTATGCTAAAGAGCCTATACATATGCTGCTCCAGTATATACCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR-3UTR CAA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATTTGGAATTTGGTTATTaGGTAAATAGGGGAAAACCC +
Preference number: 3 (lower is better)
Translates to: QFICNCNTGELPPLSLCNLEFGY*VNRGKP
Trigger: GGGTTTTCCCCTATTTACCAAATAACCAAATTCCAA...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR TCA 72 bp AGTCCTGTTGTTATACTTATTGTATCTTTGGTCTGGTaGTCTACAGTGTTCAAACAACTATCTGTTTTCCTT +
Preference number: 3 (lower is better)
Translates to: SPVVILIVSLVW*STVFKQLSVFL
Trigger: AAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACAATAAGTATAACAACAGGACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR GCA 72 bp TTATACAGTTTATATGCAATTGCAATACTGGTGAACTaGCACCCTTATCACTTTGTAATGGGAATTTCTCAA +
Preference number: 3 (lower is better)
Translates to: LYSLYAIAILVN*HPYHFVMGISQ
Trigger: TTGAGAAATTCCCATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTGTATAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGGAAAGAACCTTCTGCTaGGTTTCTGGGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMERTFC*VSGCWD
Trigger: GTCCCAGCACCCAGAAACTCAGCAGAAGGTTCTTTC...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGTCTTCACAGCACCCTTaGCCTCAGCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWSSQHP*PQHSSG
Trigger: GCCTGAGGAATGCTGAGGTCAAGGGTGCTGTGAAGA...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATTCTTCACAGCACCCTTaGCCTCAGCATTCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: QFICNCNTGELPPLSLCNSSQHP*PQHSSG
Trigger: GCCTGAGGAATGCTGAGGTCAAGGGTGCTGTGAAGA...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATGAAAGAACCTTCTGCTaGGTTTCTGGGTGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QFICNCNTGELPPLSLCNERTFC*VSGCWD
Trigger: GTCCCAGCACCCAGAAACTCAGCAGAAGGTTCTTTC...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR GCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGCTGAGGAGGAATCCCTaGAGGGTAAATTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWLRRNP*RVNSGI
Trigger: GATCCCAGAATTTACCCTGCAGGGATTCCTCCTCAG...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR GCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATCTGAGGAGGAATCCCTaGAGGGTAAATTCTGGGATC +
Preference number: 4 (lower is better)
Translates to: QFICNCNTGELPPLSLCNLRRNP*RVNSGI
Trigger: GATCCCAGAATTTACCCTGCAGGGATTCCTCCTCAG...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATGAGTATTGTAAGGGTTaGCAGATGGCGGCATACCGA +
Preference number: 4 (lower is better)
Translates to: QFICNCNTGELPPLSLCNEYCKG*QMAAYR
Trigger: TCGGTATGCCGCCATCTGCCAACCCTTACAATACTC...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CCA 90 bp AGAGGTATATACTGGAGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCGAGTATTGTAAGGGTTaGCAGATGGCGGCATACCGA +
Preference number: 4 (lower is better)
Translates to: RGIYWSSICIGSLAYIYVEYCKG*QMAAYR
Trigger: TCGGTATGCCGCCATCTGCCAACCCTTACAATACTC...GACATAAATGTATGCTAAAGAGCCTATACATATGCTGCTCCAGTATATACCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp CAGACCAGCCAGCAAAATAATACTATAGAAGAGAAAGTGAAAGGAAAAGTTTCCACATCATCACCAGGATaGGACACTCAGTGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: QTSQQNNTIEEKVKGKVSTSSPG*DTQCEQ
Trigger: TTGCTCACACTGAGTGTCTCATCCTGGTGATGATGT...GGAAACTTTTCCTTTCACTTTCTCTTCTATAGTATTATTTTGCTGGCTGGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR GCA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGCTTAGCAAGAAGGTTTaGCAACATCTTGGGGACATT +
Preference number: 4 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMLSKKV*QHLGDI
Trigger: AATGTCCCCAAGATGTTGGCAAACCTTCTTGCTAAG...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CCA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATATGGAGCCCACAAAATaGCAGCCTCAGGATAAGAAC +
Preference number: 4 (lower is better)
Translates to: QFICNCNTGELPPLSLCNMEPTK*QPQDKN
Trigger: GTTCTTATCCTGAGGCTGCCATTTTGTGGGCTCCAT...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp TGTATCTTTGGTCTGGTGATCTACAGTGTTCAAACAACTATCTGTTTTCCTTGGATTGTTGGTAGCATATaGAATATCGACGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: CIFGLVIYSVQTTICFPWIVGSI*NIDDGQ
Trigger: CTGGCCATCGTCGATATTTCATATGCTACCAACAAT...CCAAGGAAAACAGATAGTTGTTTGAACACTGTAGATCACCAGACCAAAGATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CCA 90 bp AGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCAATAAGGAAGATGGAATGGAGCCCACAAAATaGCAGCCTCAGGATAAGAAC +
Preference number: 4 (lower is better)
Translates to: SSICIGSLAYIYVNKEDGMEPTK*QPQDKN
Trigger: GTTCTTATCCTGAGGCTGCCATTTTGTGGGCTCCAT...TCCATCTTCCTTATTGACATAAATGTATGCTAAAGAGCCTATACATATGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CCA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGGCAAAGATGACAATTTaGTTGAGTGTTGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMAKMTI*LSVVSA
Trigger: TGCTGACACAACACTCAACCAAATTGTCATCTTTGC...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp ATAAACCCAAAGGCTCTTTCATATTCTAACTATAGAGGCCCAGAAATGCATACTATTGTTGGTAGCATATaGAATATCGACGATGGCCAG +
Preference number: 4 (lower is better)
Translates to: INPKALSYSNYRGPEMHTIVGSI*NIDDGQ
Trigger: CTGGCCATCGTCGATATTTCATATGCTACCAACAAT...AGTATGCATTTCTGGGCCTCTATAGTTAGAATATGAAAGAGCCTTTGGGTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CAA 72 bp CATACTTCCATCACCCGGGGTACATGTCTATGGAACTaGATAAGATTCCTAAAAGTCCTGTTGTTATACTTA +
Preference number: 4 (lower is better)
Translates to: HTSITRGTCLWN*IRFLKVLLLYL
Trigger: TAAGTATAACAACAGGACTTTTAGGAATCTTATCAAGTTCCATAGACATGTACCCCGGGTGATGGAAGTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp CAGACCAGCCAGCAAAATAATACTATAGAAGAGAAAGTGAAAGGAAAAGTTTCCATGAGACACTCAGTGTaGGCAAAAGCCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: QTSQQNNTIEEKVKGKVSMRHSV*AKAMYK
Trigger: TTTATACATGGCTTTTGCTCACACTGAGTGTCTCAT...GGAAACTTTTCCTTTCACTTTCTCTTCTATAGTATTATTTTGCTGGCTGGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR GCA 90 bp AGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCAATAAGGAAGATGGACTTAGCAAGAAGGTTTaGCAACATCTTGGGGACATT +
Preference number: 4 (lower is better)
Translates to: SSICIGSLAYIYVNKEDGLSKKV*QHLGDI
Trigger: AATGTCCCCAAGATGTTGGCAAACCTTCTTGCTAAG...TCCATCTTCCTTATTGACATAAATGTATGCTAAAGAGCCTATACATATGCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CAA 72 bp ATAATTGCAAGAGACAAGATGTTTTTCCCAGGTGAGTaGAAAGTGCAGACCAGCCAGCAAAATAATACTATA +
Preference number: 4 (lower is better)
Translates to: IIARDKMFFPGE*KVQTSQQNNTI
Trigger: TATAGTATTATTTTGCTGGCTGGTCTGCACTTTCAACTCACCTGGGAAAAACATCTTGTCTCTTGCAATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR TCA 90 bp AGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCAATAAGGAAGATGGAATGAGACACTCAGTGTaGGCAAAAGCCATGTATAAA +
Preference number: 4 (lower is better)
Translates to: SSICIGSLAYIYVNKEDGMRHSV*AKAMYK
Trigger: TTTATACATGGCTTTTGCTCACACTGAGTGTCTCAT...TCCATCTTCCTTATTGACATAAATGTATGCTAAAGAGCCTATACATATGCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
3UTR CAA 72 bp AACATTTTTCCCGTAGGATTAAATTTATCTGCTCATTaGGGTGATATTCATAGCAAAGCCATGCATCAGGTT +
Preference number: 4 (lower is better)
Translates to: NIFPVGLNLSAH*GDIHSKAMHQV
Trigger: AACCTGATGCATGGCTTTGCTATGAATATCACCCAAATGAGCAGATAAATTTAATCCTACGGGAAAAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CAA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATTCTGGGTGCTGGGACTaGGGGGCCATGTACATGACG +
Preference number: 5 (lower is better)
Translates to: QFICNCNTGELPPLSLCNSGCWD*GAMYMT
Trigger: CGTCATGTACATGGCCCCCAAGTCCCAGCACCCAGA...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CAA 90 bp AGAGGTATATACTGGAGCAGCATATGTATAGGCTCTTTAGCATACATTTATGTCTCTGGGTGCTGGGACTaGGGGGCCATGTACATGACG +
Preference number: 5 (lower is better)
Translates to: RGIYWSSICIGSLAYIYVSGCWD*GAMYMT
Trigger: CGTCATGTACATGGCCCCCAAGTCCCAGCACCCAGA...GACATAAATGTATGCTAAAGAGCCTATACATATGCTGCTCCAGTATATACCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CAA 90 bp TCCTTGGTGCCTTTATCCTGTGCACTACTTCTTCACCCTTATACAGTTTATATGAAGATGACAATTTGGTaGAGTGTTGTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: SLVPLSCALLLHPYTVYMKMTIW*SVVSAQ
Trigger: CTGTGCTGACACAACACTCAACCAAATTGTCATCTT...CATATAAACTGTATAAGGGTGAAGAAGTAGTGCACAGGATAAAGGCACCAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2
CDS-3UTR CAA 90 bp CAGTTTATATGCAATTGCAATACTGGTGAACTGCCACCCTTATCACTTTGTAATAAGATGACAATTTGGTaGAGTGTTGTGTCAGCACAG +
Preference number: 5 (lower is better)
Translates to: QFICNCNTGELPPLSLCNKMTIW*SVVSAQ
Trigger: CTGTGCTGACACAACACTCAACCAAATTGTCATCTT...ATTACAAAGTGATAAGGGTGGCAGTTCACCAGTATTGCAATTGCATATAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213952.3
ENSMUST00000214529.2