Pregenerated sensors for OLFR447 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045708Ensembl transcript IDs: ENSMUST00000216408.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATCATTGAAGGAAGTCAGGATATGAACTCAAACAGAGCTGGAACCTaGAGACAGGATCTGATGCAGAAGACATGGAGGGGTGCTTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: IIEGSQDMNSNRAGT*RQDLMQKTWRGASY Trigger: ATAAGAAGCACCCCTCCATGTCTTCTGCATCAGATCCTGTCTCCAGGTTCCAGCTCTGTTTGAGTTCATATCCTGACTTCCTTCAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR GCA 90 bp | TTACACTGTAGACAGATCCAAGATCTCCCCCAAACAGAATCAATATaGTGTGATGTGTTTATACAATGCAATGGAGATGAACAAGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: LHCRQIQDLPQTESI*CDVFIQCNGDEQAK Trigger: CTTTGCTTGTTCATCTCCATTGCATTGTATAAACACATCACAGCATATTGATTCTGTTTGGGGGAGATCTTGGATCTGTCTACAGTGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR CCA 90 bp | TTATACAATGCAATGGAGATGAACAAGCAAAGCCCTCACTCGTCCTaGAAAACTCTGACAAATAGAACAATGGTTGAAAGAAGGTTGATT | + |
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Preference number: 1 (lower is better) Translates to: LYNAMEMNKQSPHSS*KTLTNRTMVERRLI Trigger: AATCAACCTTCTTTCAACCATTGTTCTATTTGTCAGAGTTTTCCAGGACGAGTGAGGGCTTTGCTTGTTCATCTCCATTGCATTGTATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR GCA 90 bp | CTCTCTCTCACACACACACACACACACACACACACACACACACAATaGCTTCTGAAAGATGTATATAACAGTATTTACAAAACATTGATT | + |
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Preference number: 1 (lower is better) Translates to: LSLTHTHTHTHTHTQ*LLKDVYNSIYKTLI Trigger: AATCAATGTTTTGTAAATACTGTTATATACATCTTTCAGAAGGCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR CAA 90 bp | GTGAATGGGGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATaGCATTACCAATTCCTGCTCAGTGTGATGCAATTTCAAACCATG | + |
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Preference number: 2 (lower is better) Translates to: VNGAANVVEAAISSL*HYQFLLSVMQFQTM Trigger: CATGGTTTGAAATTGCATCACACTGAGCAGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCCCCATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTGCTCAGTGTATTTCTTGCAGGGACTaGTGCAGCATTTTGTACCAC | + |
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Preference number: 2 (lower is better) Translates to: CGRSSNQLIIALPIPAQCISCRD*CSILYH Trigger: GTGGTACAAAATGCTGCATCAGTCCCTGCAAGAAAT...ACACTGAGCAGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCACTCGTCCTGGAAAACTCTGACAAATAGAACAATGGTTGAAAGAAGGTTGTCTTATTCCTCATCTTaGGAAAGGCTCCCAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: PHSSWKTLTNRTMVERRLSYSSS*ERLPGV Trigger: AACTCCTGGGAGCCTTTCTCAAGATGAGGAATAAGA...CAACCTTCTTTCAACCATTGTTCTATTTGTCAGAGTTTTCCAGGACGAGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGGCTCCCAGGAGTTATTGTCCTTGGATTTTTCACTCTGATGAACTGATGTGTTTGGGTTGCTTGTaGTCCACCAATCTGAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RKAPRSYCPWIFHSDELMCLGCL*STNLKS Trigger: ACTCTTCAGATTGGTGGAGCACAAGCAACCCAAACA...CATCAGTTCATCAGAGTGAAAAATCCAAGGACAATAACTCCTGGGAGCCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTCACATTAAAAGCCCGTaGACTGTCATGCCCATGTAT | + |
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Preference number: 2 (lower is better) Translates to: GSKCGRSSNQLIIALPIPHIKSP*TVMPMY Trigger: ATACATGGGCATGACAGTGCACGGGCTTTTAATGTG...AGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTCGTCCTGGAAAACTCTaGCAAATAGAACAATGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GSKCGRSSNQLIIALPIPRPGKL*QIEQWL Trigger: CAACCATTGTTCTATTTGTCAGAGTTTTCCAGGACG...AGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATAGCAAGTTGGGGAGGAAAGTGTTTATTTTGCTTGTACTTGAATGGCATTCACTACTTTACATTGTaGGAGAAGGCAAGGCCCACT | + |
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Preference number: 2 (lower is better) Translates to: QIASWGGKCLFCLYLNGIHYFTL*EKARPT Trigger: AGTGGGCCTTGCCTTCTCTCACAATGTAAAGTAGTG...AATGCCATTCAAGTACAAGCAAAATAAACACTTTCCTCCCCAACTTGCTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAGGCCCACTCATTGGAAGAGGGTGTAATGAAACGTCTTATTCCTCATCTAGGAGTTATTGTCCTTaGATTTTTCACTCTGATGAA | + |
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Preference number: 2 (lower is better) Translates to: RQGPLIGRGCNETSYSSSRSYCP*IFHSDE Trigger: TTCATCAGAGTGAAAAATCCAAGGACAATAACTCCT...AGATGAGGAATAAGACGTTTCATTACACCCTCTTCCAATGAGTGGGCCTTGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR GCA 90 bp | CAAATAGCAAGTTGGGGAGGAAAGTGTTTATTTTGCTTGTACTTGAATGGCATTGTACAGTACCGGATTTaGATCTTTGTCTCCCACTTT | + |
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Preference number: 2 (lower is better) Translates to: QIASWGGKCLFCLYLNGIVQYRI*IFVSHF Trigger: AAAGTGGGAGACAAAGATGCAAATCCGGTACTGTAC...AATGCCATTCAAGTACAAGCAAAATAAACACTTTCCTCCCCAACTTGCTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTGATGTGTTTATACAATaGAATGGAGATGAACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: GSKCGRSSNQLIIALPIPDVFIQ*NGDEQA Trigger: TGCTTGTTCATCTCCATTGCATTGTATAAACACATC...AGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR CCA 72 bp | GGAAGTCAGGATATGAACTCAAACAGAGCTGGAACCTaGAGACAGGATCTGATGCAGAAGACATGGAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: GSQDMNSNRAGT*RQDLMQKTWRG Trigger: ACCCCTCCATGTCTTCTGCATCAGATCCTGTCTCCAGGTTCCAGCTCTGTTTGAGTTCATATCCTGACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | TCTAGGCAGACTGTAGGCAGCATTTCTTGCAGGGACTaGTGCAGCATTTTGTACCACTATTGCACCTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: SRQTVGSISCRD*CSILYHYCTCV Trigger: CACACAGGTGCAATAGTGGTACAAAATGCTGCATCAGTCCCTGCAAGAAATGCTGCCTACAGTCTGCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR GCA 72 bp | CTGGAGACAGGATCTGATGCAGAAGACATGGAGGGGTaGTTCTTATTGGCTTGCTCAGCCTGCTTTCTTATA | + |
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Preference number: 3 (lower is better) Translates to: LETGSDAEDMEG*FLLACSACFLI Trigger: TATAAGAAAGCAGGCTGAGCAAGCCAATAAGAAGCACCCCTCCATGTCTTCTGCATCAGATCCTGTCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGCTCCCAGGAGTTATTGTCCTTGGATTTTTCACTCTGATGAACTGATGCATGCCCATGTATGTTaGGGTTGCTTGTGCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: RKAPRSYCPWIFHSDELMHAHVC*GCLCST Trigger: GGTGGAGCACAAGCAACCCAAACATACATGGGCATG...CATCAGTTCATCAGAGTGAAAAATCCAAGGACAATAACTCCTGGGAGCCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR GCA 72 bp | GATGCAGAAGACATGGAGGGGTGCTTCTTATTGGCTTaGTCAGCCTGCTTTCTTATAGAACATAGAACCACC | + |
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Preference number: 3 (lower is better) Translates to: DAEDMEGCFLLA*SACFLIEHRTT Trigger: GGTGGTTCTATGTTCTATAAGAAAGCAGGCTGAGCAAGCCAATAAGAAGCACCCCTCCATGTCTTCTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAAGGCTCCCAGGAGTTATTGTCCTTGGATTTTTCACTCTGATGAACTGATGAACACAGGAAGGTTCTaGGAAGGTGTGAGAAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RKAPRSYCPWIFHSDELMNTGRF*EGVRRL Trigger: CAGCCTTCTCACACCTTCCAAGAACCTTCCTGTGTT...CATCAGTTCATCAGAGTGAAAAATCCAAGGACAATAACTCCTGGGAGCCTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTGCTCAGTGTTGTAGGCAGCATTTCTaGCAGGGACTGATGCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: CGRSSNQLIIALPIPAQCCRQHF*QGLMQH Trigger: ATGCTGCATCAGTCCCTGCAAGAAATGCTGCCTACA...ACACTGAGCAGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | GAATGGCATTGTTCATCATTGAAGGAAGTCAGGATATaGACTCAAACAGAGCTGGAACCTGGAGACAGGATC | + |
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Preference number: 3 (lower is better) Translates to: EWHCSSLKEVRI*TQTELEPGDRI Trigger: GATCCTGTCTCCAGGTTCCAGCTCTGTTTGAGTTCATATCCTGACTTCCTTCAATGATGAACAATGCCATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCATTTTGTACCACTATTGCACCTGTGTGTATATCTTTCAAGCTCTTAGCTCCATGTATGTTTGGGTaGCTTGTGCTCCACCAATCT | + |
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Preference number: 3 (lower is better) Translates to: AAFCTTIAPVCISFKLLAPCMFG*LVLHQS Trigger: AGATTGGTGGAGCACAAGCAACCCAAACATACATGG...AGCTAAGAGCTTGAAAGATATACACACAGGTGCAATAGTGGTACAAAATGCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | GGAAGAGGGTGTAATGAAACGTCTTATTCCTCATCTTaGGAAAGGCTCCCAGGAGTTATTGTCCTTGGATTT | + |
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Preference number: 3 (lower is better) Translates to: GRGCNETSYSSS*ERLPGVIVLGF Trigger: AAATCCAAGGACAATAACTCCTGGGAGCCTTTCTCAAGATGAGGAATAAGACGTTTCATTACACCCTCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR CCA 72 bp | GCAATGGAGATGAACAAGCAAAGCCCTCACTCGTCCTaGAAAACTCTGACAAATAGAACAATGGTTGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: AMEMNKQSPHSS*KTLTNRTMVER Trigger: TCTTTCAACCATTGTTCTATTTGTCAGAGTTTTCCAGGACGAGTGAGGGCTTTGCTTGTTCATCTCCATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CAA 90 bp | CAAATAGCAAGTTGGGGAGGAAAGTGTTTATTTTGCTTGTACTTGAATGGCATTGGCTCCCAGGAGTTATaGTCCTTGGATTTTTCACTC | + |
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Preference number: 3 (lower is better) Translates to: QIASWGGKCLFCLYLNGIGSQEL*SLDFSL Trigger: GAGTGAAAAATCCAAGGACAATAACTCCTGGGAGCC...AATGCCATTCAAGTACAAGCAAAATAAACACTTTCCTCCCCAACTTGCTATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCACTCGTCCTGGAAAACTCTGACAAATAGAACAATGGTTGAAAGAAGGTTGCATTTTGTACCACTATaGCACCTGTGTGTATATCTT | + |
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Preference number: 3 (lower is better) Translates to: PHSSWKTLTNRTMVERRLHFVPL*HLCVYL Trigger: AAGATATACACACAGGTGCAATAGTGGTACAAAATG...CAACCTTCTTTCAACCATTGTTCTATTTGTCAGAGTTTTCCAGGACGAGTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | GCAACAAATGCATACCCTATACTTGTTTGTTCTGCTTaGAAGAAAGTTAGACATGTGAATGGGGCAGCAAAT | + |
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Preference number: 3 (lower is better) Translates to: ATNAYPILVCSA*KKVRHVNGAAN Trigger: ATTTGCTGCCCCATTCACATGTCTAACTTTCTTTCAAGCAGAACAAACAAGTATAGGGTATGCATTTGTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | CAAGTTGGGGAGGAAAGTGTTTATTTTGCTTGTACTTaGATGGCATTGTTCATCATTGAAGGAAGTCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: QVGEESVYFACT*MALFIIEGSQD Trigger: ATCCTGACTTCCTTCAATGATGAACAATGCCATTCAAGTACAAGCAAAATAAACACTTTCCTCCCCAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR GCA 72 bp | AGACAGATCCAAGATCTCCCCCAAACAGAATCAATATaGTGTGATGTGTTTATACAATGCAATGGAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: RQIQDLPQTESI*CDVFIQCNGDE Trigger: TTCATCTCCATTGCATTGTATAAACACATCACAGCATATTGATTCTGTTTGGGGGAGATCTTGGATCTGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | AGGTGTGAGAAGGCTGTTGGAAGAAAATGGATAGGATaGACAAGTTACATGTCCTGGTCAATATTAAATGAA | + |
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Preference number: 3 (lower is better) Translates to: RCEKAVGRKWIG*TSYMSWSILNE Trigger: TTCATTTAATATTGACCAGGACATGTAACTTGTTCATCCTATCCATTTTCTTCCAACAGCCTTCTCACACCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | CCTATAGTTGGATCTTATAAAAGGCATTTTCTTAATTaGGAGGCCCTACTCTCATGCGACTTTAGTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: PIVGSYKRHFLN*EALLSCDFSLC Trigger: ACACAAACTAAAGTCGCATGAGAGTAGGGCCTCTCAATTAAGAAAATGCCTTTTATAAGATCCAACTATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR TCA 72 bp | TTATTTTGCTTGTACTTGAATGGCATTGTTCATCATTaGAGGAAGTCAGGATATGAACTCAAACAGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: LFCLYLNGIVHH*RKSGYELKQSW Trigger: CCAGCTCTGTTTGAGTTCATATCCTGACTTCCTTCAATGATGAACAATGCCATTCAAGTACAAGCAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR TCA 90 bp | AGGCAAGGCCCACTCATTGGAAGAGGGTGTAATGAAACGTCTTATTCCTCATCTTTGGACTTCCCGTGTTaGGGCCCAATGTACATGACA | + |
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Preference number: 4 (lower is better) Translates to: RQGPLIGRGCNETSYSSSLDFPC*GPMYMT Trigger: TGTCATGTACATTGGGCCTCAACACGGGAAGTCCAA...AGATGAGGAATAAGACGTTTCATTACACCCTCTTCCAATGAGTGGGCCTTGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR GCA 90 bp | TGCTGTGATGTGTTTATACAATGCAATGGAGATGAACAAGCAAAGCCCTCACTCGCAAAGAGGAGCATCTaGATCCTCGGGCTGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: CCDVFIQCNGDEQAKPSLAKRSI*ILGLRG Trigger: TCCTCTCAGCCCGAGGATGCAGATGCTCCTCTTTGC...GAGTGAGGGCTTTGCTTGTTCATCTCCATTGCATTGTATAAACACATCACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR CCA 90 bp | GGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTGTGGAGAAGGCTTTCTaGCGCCCCTGCTGTGACTTA | + |
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Preference number: 4 (lower is better) Translates to: GSKCGRSSNQLIIALPIPVEKAF*RPCCDL Trigger: TAAGTCACAGCAGGGGCGCCAGAAAGCCTTCTCCAC...AGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| 3UTR CAA 72 bp | CTACTTTACATTGTGAGAGAAGGCAAGGCCCACTCATaGGAAGAGGGTGTAATGAAACGTCTTATTCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLYIVREGKAHS*EEGVMKRLIPH Trigger: ATGAGGAATAAGACGTTTCATTACACCCTCTTCCAATGAGTGGGCCTTGCCTTCTCTCACAATGTAAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR CCA 90 bp | TGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTGCTCAGTGTAACAACAATACTAGATaGACCAGGGCCAAGAGTACT | + |
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Preference number: 4 (lower is better) Translates to: CGRSSNQLIIALPIPAQCNNNTR*TRAKST Trigger: AGTACTCTTGGCCCTGGTCCATCTAGTATTGTTGTT...ACACTGAGCAGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR TCA 90 bp | CCTCACTCGTCCTGGAAAACTCTGACAAATAGAACAATGGTTGAAAGAAGGTTGAAACCATTAACTCATTaGTGCGGGTATCTGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: PHSSWKTLTNRTMVERRLKPLTH*CGYLNK Trigger: CTTGTTCAGATACCCGCATCAATGAGTTAATGGTTT...CAACCTTCTTTCAACCATTGTTCTATTTGTCAGAGTTTTCCAGGACGAGTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR TCA 90 bp | GGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTATTTCACAGAAAAAGTaGTTCACTTTTTGTGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GSKCGRSSNQLIIALPIPISQKK*FTFCEP Trigger: CGGCTCACAAAAAGTGAATCACTTTTTCTGTGAAAT...AGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR TCA 90 bp | AGAAAGGCTCCCAGGAGTTATTGTCCTTGGATTTTTCACTCTGATGAACTGATGATAAGAGACTACAATTaGAGAAAATGGTCCGACAAG | + |
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Preference number: 4 (lower is better) Translates to: RKAPRSYCPWIFHSDELMIRDYN*RKWSDK Trigger: CTTGTCGGACCATTTTCTTCAATTGTAGTCTCTTAT...CATCAGTTCATCAGAGTGAAAAATCCAAGGACAATAACTCCTGGGAGCCTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR GCA 90 bp | CAAATAGCAAGTTGGGGAGGAAAGTGTTTATTTTGCTTGTACTTGAATGGCATTGAGACATTCCGTGTGTaGAAACGTCAAAAAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: QIASWGGKCLFCLYLNGIETFRV*KRQKEK Trigger: TTTCTCTTTTTGACGTTTGCACACACGGAATGTCTC...AATGCCATTCAAGTACAAGCAAAATAAACACTTTCCTCCCCAACTTGCTATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCAAATGTGGTAGAAGCAGCAATCAGCTCATTATTGCATTACCAATTCCTCATAAGAGACTACAATaGAAGAAAATGGTCCGACAA | + |
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Preference number: 5 (lower is better) Translates to: GSKCGRSSNQLIIALPIPHKRLQ*KKMVRQ Trigger: TTGTCGGACCATTTTCTTCAATTGTAGTCTCTTATG...AGGAATTGGTAATGCAATAATGAGCTGATTGCTGCTTCTACCACATTTGCTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216408.2 |
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