Pregenerated sensors for OLFR446 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073111Ensembl transcript IDs: ENSMUST00000101461.2, ENSMUST00000215369.2, ENSMUST00000215686.2, ENSMUST00000216199.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCTAGCTTCGAGGACCCTCATTCCAGGGACCGCCATACCTGACTaGGGTGGTCTGTGGCAGACGAACAGGCGTTTGAGTGTACATGTT | + |
|
Preference number: 1 (lower is better) Translates to: HLASRTLIPGTAIPD*GGLWQTNRRLSVHV Trigger: AACATGTACACTCAAACGCCTGTTCGTCTGCCACAGACCACCCCAGTCAGGTATGGCGGTCCCTGGAATGAGGGTCCTCGAAGCTAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR GCA 90 bp | TGCACTCACTCTGTGGACCAGGCTAGCTTCAAATTCAGATCTGCCTaGCTCTGCCTCCTGAGTACTGGGATTGAAGGTGAGTACCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: CTHSVDQASFKFRSA*LCLLSTGIEGEYHH Trigger: GTGGTGGTACTCACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAGCCTGGTCCACAGAGTGAGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 90 bp | CCACTCAGATTCAAACTGCCTGTGTTTGTTTCTGTTTGTCACCGCTaGATCCTTACTCACCTAGCTTCGAGGACCCTCATTCCAGGGACC | + |
|
Preference number: 1 (lower is better) Translates to: PLRFKLPVFVSVCHR*ILTHLASRTLIPGT Trigger: GGTCCCTGGAATGAGGGTCCTCGAAGCTAGGTGAGTAAGGATTCAGCGGTGACAAACAGAAACAAACACAGGCAGTTTGAATCTGAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR GCA 90 bp | ACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTaGTGTGTACAACTCAGTGGCTTTGCCAGAAAACACTGTTCCCTA | + |
|
Preference number: 1 (lower is better) Translates to: TCLPRSSTCCLAAVN*CVQLSGFARKHCSL Trigger: TAGGGAACAGTGTTTTCTGGCAAAGCCACTGAGTTGTACACAGCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 90 bp | TCATTGCATTTTGCTTTAGGCAATGGAATTAAAGGAAAGCTATGCTaGGAGGGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAG | + |
|
Preference number: 1 (lower is better) Translates to: SLHFALGNGIKGKLC*EGGFWEKLLSDGRE Trigger: CTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCCCTCTCAGCATAGCTTTCCTTTAATTCCATTGCCTAAAGCAAAATGCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 90 bp | CAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATaGTTCCTACCTATACTTTCACATGATTTCTTTTCTATGCAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: QKTLFPNSLSHLCHV*FLPILSHDFFSMQR Trigger: CCTTTGCATAGAAAAGAAATCATGTGAAAGTATAGGTAGGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CCA 90 bp | AAGTTTCCTTTTTCCTATCATAAAATTACTTGCCACCATTCAGTCTaGTATTTCTGTAACTTTCAAGGCTCATATCCTGATGAGACTGAT | + |
|
Preference number: 1 (lower is better) Translates to: KFPFSYHKITCHHSV*YFCNFQGSYPDETD Trigger: ATCAGTCTCATCAGGATATGAGCCTTGAAAGTTACAGAAATACCAGACTGAATGGTGGCAAGTAATTTTATGATAGGAAAAAGGAAACTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTCCTGCCTCTGCCTCCTaGGTACTGGGATTGAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSPASAS*VLGLKV Trigger: CACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGG...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAATGGGGCCACTAACATaGCCTTATCCCCAGGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GGFWEKLLSDGRELQVRIMGPLT*PYPQGN Trigger: GTTTCCCTGGGGATAAGGTCATGTTAGTGGCCCCAT...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTCTTCAAATTCAGATCTaGCTGCCTCTGCCTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSLQIQI*LPLPPE Trigger: CTCAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAG...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAACAACTCAGTGGCTTTaGCAGAAAACACTGTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GGFWEKLLSDGRELQVRITTQWL*QKTLFP Trigger: AGGGAACAGTGTTTTCTGGCAAAGCCACTGAGTTGT...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATATACCATAAAGAAAATTaGCTCTGTCTCCCAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GGFWEKLLSDGRELQVRIYHKEN*LCLPAA Trigger: AGCAGCTGGGAGACAGAGTCAATTTTCTTTATGGTA...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAATGGGAGGTGGGTTTTaGTATATGGTAAAGAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GGFWEKLLSDGRELQVRIMGGGF*YMVKKA Trigger: GGCTTTCTTTACCATATACCAAAACCCACCTCCCAT...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTGCTACACGTGTGTCATaGGAGGTGGGTTTTGGTATA | + |
|
Preference number: 2 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSATRVS*EVGFGI Trigger: TATACCAAAACCCACCTCCCATGACACACGTGTAGC...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCCCTGCCTCTGCCTCCTaGGTACTGGGATTGAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVPASAS*VLGLKV Trigger: CACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGG...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAATGGGGCCACTAACATaGCCTTATCCCCAGGGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRMGPLT*PYPQGN Trigger: GTTTCCCTGGGGATAAGGTCATGTTAGTGGCCCCAT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAAACTTTGATGAGCATTaGGCAATGGGACTGTTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: GGFWEKLLSDGRELQVRINFDEH*AMGLFY Trigger: ATAGAACAGTCCCATTGCTCAATGCTCATCAAAGTT...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAGACGAACAGGCGTTTGAGTGTACATGTTCATCATAGTCTTAAAAAGGCTCTTCAAATTCAGATCTaGCTGCCTCTGCCTCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: WQTNRRLSVHVHHSLKKALQIQI*LPLPPE Trigger: CTCAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAG...AGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGACTCCTTGACTGTCTGTaGACTCACTCTGTGGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRLLDCL*THSVDQ Trigger: CTGGTCCACAGAGTGAGTGCACAGACAGTCAAGGAG...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGACATCTGTCTGCACTCTGGTCATCTACTTTCTTATTGATTCTGTACTCATTAAAAGCTCTTGGTCTTaGTGGCCCCATCAGGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WTSVCTLVIYFLIDSVLIKSSWS*WPHQVW Trigger: CCACACCTGATGGGGCCATCAAGACCAAGAGCTTTT...AATGAGTACAGAATCAATAAGAAAGTAGATGACCAGAGTGCAGACAGATGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAAAAGGAAAGCTATGCTaGGAGGGAGGCTTCTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRKGKLC*EGGFWE Trigger: TTCCCAGAAGCCTCCCTCTCAGCATAGCTTTCCTTT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCCACCTTCCAGTACTATaGAAGTCACCCACTAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSHLPVL*KSPTKD Trigger: ATCCTTAGTGGGTGACTTTCATAGTACTGGAAGGTG...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAAAATTCAGATCTGCCTaGCTCTGCCTCCTGAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRKFRSA*LCLLST Trigger: AGTACTCAGGAGGCAGAGGCAGGCAGATCTGAATTT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAGAGTACTTTACTGTTTaGTGGTCAACTTACCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: GGFWEKLLSDGRELQVRIEYFTV*WSTYHK Trigger: TTTATGGTAAGTTGACCACCAAACAGTAAAGTACTC...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTTCCACAGACTGAGGTaGTTGACCTCAAAAGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCFHRLR*LTSKEE Trigger: TTCCTCTTTTGAGGTCAATCACCTCAGTCTGTGGAA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGACATCTGTCTGCACTCTGGTCATCTACTTTCTTATTGATTCTGTACTCATTCACCTTCCAGTACTATaGAAGTCACCCACTAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: WTSVCTLVIYFLIDSVLIHLPVL*KSPTKD Trigger: ATCCTTAGTGGGTGACTTTCATAGTACTGGAAGGTG...AATGAGTACAGAATCAATAAGAAAGTAGATGACCAGAGTGCAGACAGATGTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCAAATTCAGATCTGCCTaGCTCTGCCTCCTGAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVKFRSA*LCLLST Trigger: AGTACTCAGGAGGCAGAGGCAGGCAGATCTGAATTT...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCCCCCTGCTTAAGACCTaGAAAATCCACTCAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCPLLKT*KIHSDS Trigger: TGAATCTGAGTGGATTTTGCAGGTCTTAAGCAGGGG...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCCTAGCAGCTGTTAACTaGTGTGTACAACTCAGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVLAAVN*CVQLSG Trigger: GCCACTGAGTTGTACACAGCAGTTAACAGCTGCTAG...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCGTTTTCTGTGTTCTATaGCATAACGATGTGATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSVFCVL*HNDVMS Trigger: GGACATCACATCGTTATGCCATAGAACACAGAAAAC...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGACATCTGTCTGCACTCTGGTCATCTACTTTCTTATTGATTCTGTACTCATTCTGTGTACAACTCAGTaGCTTTGCCAGAAAACACTG | + |
|
Preference number: 2 (lower is better) Translates to: WTSVCTLVIYFLIDSVLILCTTQ*LCQKTL Trigger: CAGTGTTTTCTGGCAAAGCCACTGAGTTGTACACAG...AATGAGTACAGAATCAATAAGAAAGTAGATGACCAGAGTGCAGACAGATGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CAA 90 bp | ATTGTGAGTCTCTGTGATAATCACCGTCTTCTCCAAGAAGAAACTTaGATGAGCATTGAGCAATGGGACTGTTCTATGGGTATAGCAATA | + |
|
Preference number: 2 (lower is better) Translates to: IVSLCDNHRLLQEET*MSIEQWDCSMGIAI Trigger: TATTGCTATACCCATAGAACAGTCCCATTGCTCAATGCTCATCAAAGTTTCTTCTTGGAGAAGACGGTGATTATCACAGAGACTCACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCCTTTTCCGTGCCAAATaGTTTTTGTTGGTATTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSLFRAK*FLLVFV Trigger: CACAAATACCAACAAAAATCATTTGGCACGGAAAAG...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCCCCCTGCTTAAGACCTaGAAAATCCACTCAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVPLLKT*KIHSDS Trigger: TGAATCTGAGTGGATTTTGCAGGTCTTAAGCAGGGG...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAGTTTTCTGTGTTCTATaGCATAACGATGTGATGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRVFCVL*HNDVMS Trigger: GGACATCACATCGTTATGCCATAGAACACAGAAAAC...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAATGAGCATTGAGCAATaGGACTGTTCTATGGGTATA | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRMSIEQ*DCSMGI Trigger: TATACCCATAGAACAGTCCCATTGCTCAATGCTCAT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGACTTTTCCGTGCCAAATaGTTTTTGTTGGTATTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRLFRAK*FLLVFV Trigger: CACAAATACCAACAAAAATCATTTGGCACGGAAAAG...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGACATCTGTCTGCACTCTGGTCATCTACTTTCTTATTGATTCTGTACTCATTTATCCTTCATTAGCATaGATAGCACCTTCCAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: WTSVCTLVIYFLIDSVLIYPSLA*IAPSST Trigger: AGTACTGGAAGGTGCTATGCATGCTAATGAAGGATA...AATGAGTACAGAATCAATAAGAAAGTAGATGACCAGAGTGCAGACAGATGTCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTATCCTTCATTAGCATaGATAGCACCTTCCAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCYPSLA*IAPSST Trigger: AGTACTGGAAGGTGCTATGCATGCTAATGAAGGATA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTTGTTCTCAAATGTGTaGTTGCTCACAGGTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCLFSNV*LLTGFL Trigger: AAGAAAACCTGTGAGCAAGCACACATTTGAGAACAA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGACATCTGTCTGCACTCTGGTCATCTACTTTCTTATTGATTCTGTACTCATTTTGTTCTCAAATGTGTaGTTGCTCACAGGTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: WTSVCTLVIYFLIDSVLILFSNV*LLTGFL Trigger: AAGAAAACCTGTGAGCAAGCACACATTTGAGAACAA...AATGAGTACAGAATCAATAAGAAAGTAGATGACCAGAGTGCAGACAGATGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTGCCACCATTCAGTCTaGTATTTCTGTAACTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCCHHSV*YFCNFQ Trigger: TTGAAAGTTACAGAAATACCAGACTGAATGGTGGCA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCCTTTTCCGTGCCAAATaGTTTTTGTTGGTATTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVLFRAK*FLLVFV Trigger: CACAAATACCAACAAAAATCATTTGGCACGGAAAAG...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCTTGTTCTCAAATGTGTaGTTGCTCACAGGTTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVLFSNV*LLTGFL Trigger: AAGAAAACCTGTGAGCAAGCACACATTTGAGAACAA...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CCA 72 bp | TCGAGGACCCTCATTCCAGGGACCGCCATACCTGACTaGGGTGGTCTGTGGCAGACGAACAGGCGTTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRTLIPGTAIPD*GGLWQTNRRLS Trigger: ACTCAAACGCCTGTTCGTCTGCCACAGACCACCCCAGTCAGGTATGGCGGTCCCTGGAATGAGGGTCCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CCA 72 bp | ATTCCAGGGACCGCCATACCTGACTGGGGTGGTCTGTaGCAGACGAACAGGCGTTTGAGTGTACATGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: IPGTAIPDWGGL*QTNRRLSVHVH Trigger: ATGAACATGTACACTCAAACGCCTGTTCGTCTGCCACAGACCACCCCAGTCAGGTATGGCGGTCCCTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR GCA 72 bp | TCTGTGGACCAGGCTAGCTTCAAATTCAGATCTGCCTaGCTCTGCCTCCTGAGTACTGGGATTGAAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVDQASFKFRSA*LCLLSTGIEGE Trigger: CTCACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAGCCTGGTCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | CTAGCTTCAAATTCAGATCTGCCTGCCTCTGCCTCCTaGGTACTGGGATTGAAGGTGAGTACCACCACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: LASNSDLPASAS*VLGLKVSTTTD Trigger: GTCAGTGGTGGTACTCACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CCA 72 bp | TTGAAGGTGAGCACCAGCCTGGTTTTCTGTGTTCTATaGCATAACGATGTGATGTCCAGCAATAGGCTGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKVSTSLVFCVL*HNDVMSSNRLS Trigger: CGACAGCCTATTGCTGGACATCACATCGTTATGCCATAGAACACAGAAAACCAGGCTGGTGCTCACCTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAGATGTTTGTGTCTCTTaGTATAGCCTTGACTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGFWEKLLSDGRELQVRIDVCVS*YSLDSL Trigger: CAAGGAGTCAAGGCTATACAAAGAGACACAAACATC...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCCAAAAGCTCTTGGTCTaGATGGCCCCATCAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSQKLLV*MAPSGV Trigger: CACACCTGATGGGGCCATCAAGACCAAGAGCTTTTG...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATACTCCAAGAAGAAACTTaGATGAGCATTGAGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: GGFWEKLLSDGRELQVRILQEET*MSIEQW Trigger: CCATTGCTCAATGCTCATCAAAGTTTCTTCTTGGAG...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | CTGACTGGGGTGGTCTGTGGCAGACGAACAGGCGTTTaGGTGTACATGTTCATCATAGTCTTAAAAAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTGVVCGRRTGV*VYMFIIVLKRL Trigger: AAGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCACAGACCACCCCAGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | CCAGCCTGGTTTTCTGTGTTCTATGGCATAACGATGTaGTGTCCAGCAATAGGCTGTCGGCATCAAGTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PAWFSVFYGITM*CPAIGCRHQVL Trigger: TAGAACTTGATGCCGACAGCCTATTGCTGGACATCACATCGTTATGCCATAGAACACAGAAAACCAGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | TTCAAACTGCCTGTGTTTGTTTCTGTTTGTCACCGCTaGATCCTTACTCACCTAGCTTCGAGGACCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: FKLPVFVSVCHR*ILTHLASRTLI Trigger: AATGAGGGTCCTCGAAGCTAGGTGAGTAAGGATTCAGCGGTGACAAACAGAAACAAACACAGGCAGTTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR GCA 72 bp | CCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTaGTGTGTACAACTCAGTGGCTTTGCCAGAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: PRSSTCCLAAVN*CVQLSGFARKH Trigger: GTGTTTTCTGGCAAAGCCACTGAGTTGTACACAGCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | AGTAAGAAACCATCCCTAGATATGGGGCCACTAACATaGCCTTATCCCCAGGGAAACCAACACTTTACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SKKPSLDMGPLT*PYPQGNQHFTK Trigger: TTTTGTAAAGTGTTGGTTTCCCTGGGGATAAGGTCATGTTAGTGGCCCCATATCTAGGGATGGTTTCTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | TTTGCTTTAGGCAATGGAATTAAAGGAAAGCTATGCTaGGAGGGAGGCTTCTGGGAAAAGCTCCTTTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FALGNGIKGKLC*EGGFWEKLLSD Trigger: ATCAGAAAGGAGCTTTTCCCAGAAGCCTCCCTCTCAGCATAGCTTTCCTTTAATTCCATTGCCTAAAGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCGATGTTTGTGTCTCTTaGTATAGCCTTGACTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSDVCVS*YSLDSL Trigger: CAAGGAGTCAAGGCTATACAAAGAGACACAAACATC...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGATCAAACTGCCTGTGTTaGTTTCTGTTTGTCACCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRSNCLC*FLFVTA Trigger: AGCGGTGACAAACAGAAACAAACACAGGCAGTTTGA...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCCTCCAAGAAGAAACTTaGATGAGCATTGAGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSLQEET*MSIEQW Trigger: CCATTGCTCAATGCTCATCAAAGTTTCTTCTTGGAG...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTACAACTCAGTGGCTTaGCCAGAAAACACTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCYNSVA*PENTVP Trigger: GGGAACAGTGTTTTCTGGCAAAGCCACTGAGTTGTA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTCAAACTGCCTGTGTTaGTTTCTGTTTGTCACCGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCSNCLC*FLFVTA Trigger: AGCGGTGACAAACAGAAACAAACACAGGCAGTTTGA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCTACAACTCAGTGGCTTaGCCAGAAAACACTGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVYNSVA*PENTVP Trigger: GGGAACAGTGTTTTCTGGCAAAGCCACTGAGTTGTA...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCGATGTTTGTGTCTCTTaGTATAGCCTTGACTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVDVCVS*YSLDSL Trigger: CAAGGAGTCAAGGCTATACAAAGAGACACAAACATC...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCCTCCAAGAAGAAACTTaGATGAGCATTGAGCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVLQEET*MSIEQW Trigger: CCATTGCTCAATGCTCATCAAAGTTTCTTCTTGGAG...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | CCTATACTCTCTTATTCTCTGTACATTAATCAATTGTaGGTCTCTGTGATAATCACCGTCTTCTCCAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PILSYSLYINQL*VSVIITVFSKK Trigger: CTTCTTGGAGAAGACGGTGATTATCACAGAGACTCACAATTGATTAATGTACAGAGAATAAGAGAGTATAGG 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCTTCTCAAATGTGTGCTaGCTCACAGGTTTTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVFSNVC*LTGFLF Trigger: AAAAAGAAAACCTGTGAGCAAGCACACATTTGAGAA...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR TCA 72 bp | CTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATaGTTCCTACCTATACTTTCACATGATTTCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFPNSLSHLCHV*FLPILSHDFFS Trigger: AGAAAAGAAATCATGTGAAAGTATAGGTAGGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR GCA 72 bp | GATTCCTACCTATACTTTCACATGATTTCTTTTCTATaGAAAGGTTCTGATATAGATGTGAGACTTAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: DSYLYFHMISFL*KGSDIDVRLRT Trigger: AGTCCTAAGTCTCACATCTATATCAGAACCTTTGCATAGAAAAGAAATCATGTGAAAGTATAGGTAGGAATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTGCCTGCCTCTGCCTCCTGAGTACTGGGATTGAAGGTGAGTACCACCACTCTGCGACCCTCCCCTaGGTGGATTCCGAGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSACLCLLSTGIEGEYHHSATLP*VDSENG Trigger: GCCATTCTCGGAATCCACTCAGGGGAGGGTCGCAGA...GTGGTGGTACTCACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATATCTGCGACCCTCCCCTaGGTGGATTCCGAGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGFWEKLLSDGRELQVRISATLP*VDSENG Trigger: GCCATTCTCGGAATCCACTCAGGGGAGGGTCGCAGA...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | CACTCTGTGGACCAGGCTAGCTTCAAATTCAGATCTGCCTGCCTCTGCCTCCTGAGAATGAGCGTGATATaGAGTGAGGCCAAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQASFKFRSACLCLLRMSVI*SEAKRK Trigger: CTTCCTCTTGGCCTCACTCCATATCACGCTCATTCT...CAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAGCCTGGTCCACAGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAGGGAATGCTTGGATTTaGGGGCCATGTACATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGFWEKLLSDGRELQVRIGNAWI*GPCTWR Trigger: TCGCCATGTACATGGCCCCCAAATCCAAGCATTCCC...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | AGATCTGCCTGCCTCTGCCTCCTGAGTACTGGGATTGAAGGTGAGTACCACCACATCTTTCTCTGTTCTTaGGAATGCTTGGATTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RSACLCLLSTGIEGEYHHIFLCS*ECLDLG Trigger: CCCCAAATCCAAGCATTCCCAAGAACAGAGAAAGAT...GTGGTGGTACTCACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | CACTCTGTGGACCAGGCTAGCTTCAAATTCAGATCTGCCTGCCTCTGCCTCCTGATCTTTCTCTGTTCTTaGGAATGCTTGGATTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQASFKFRSACLCLLIFLCS*ECLDLG Trigger: CCCCAAATCCAAGCATTCCCAAGAACAGAGAAAGAT...CAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAGCCTGGTCCACAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CAA 72 bp | CCTGACTGGGGTGGTCTGTGGCAGACGAACAGGCGTTaGAGTGTACATGTTCATCATAGTCTTAAAAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDWGGLWQTNRR*SVHVHHSLKKA Trigger: AGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCACAGACCACCCCAGTCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | CACTCTGTGGACCAGGCTAGCTTCAAATTCAGATCTGCCTGCCTCTGCCTCCTGTACAAAGCGATCATATaGCATCACTACCAGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSVDQASFKFRSACLCLLYKAII*HHYQNQ Trigger: TTGATTCTGGTAGTGATGTCATATGATCGCTTTGTA...CAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAGCCTGGTCCACAGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | AGATCTGCCTGCCTCTGCCTCCTGAGTACTGGGATTGAAGGTGAGTACCACCACTACAAAGCGATCATATaGCATCACTACCAGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RSACLCLLSTGIEGEYHHYKAII*HHYQNQ Trigger: TTGATTCTGGTAGTGATGTCATATGATCGCTTTGTA...GTGGTGGTACTCACCTTCAATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAATGGTTGACTTTTTGTaGCCCACAGAATGGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGFWEKLLSDGRELQVRIMVDFL*PTEWES Trigger: AGACTCCCATTCTGTGGGCCACAAAAAGTCAACCAT...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAGACCATCACAGAGCCTaGAAAAAGAACGACTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GGFWEKLLSDGRELQVRIDHHRA*KKNDLI Trigger: AATCAAGTCGTTCTTTTTGCAGGCTCTGTGATGGTC...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTAGAATGAGCGTGATATaGAGTGAGGCCAAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSRMSVI*SEAKRK Trigger: CTTCCTCTTGGCCTCACTCCATATCACGCTCATTCT...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATAATCTTTCTCTGTTCTTaGGAATGCTTGGATTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGFWEKLLSDGRELQVRIIFLCS*ECLDLG Trigger: CCCCAAATCCAAGCATTCCCAAGAACAGAGAAAGAT...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTATGGTTGACTTTTTGTaGCCCACAGAATGGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSMVDFL*PTEWES Trigger: AGACTCCCATTCTGTGGGCCACAAAAAGTCAACCAT...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAGGGAATGCTTGGATTTaGGGGCCATGTACATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRGNAWI*GPCTWR Trigger: TCGCCATGTACATGGCCCCCAAATCCAAGCATTCCC...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CAA 72 bp | TTTGATGTTTGTGTCTCTTTGTATAGCCTTGACTCCTaGACTGTCTGTGCACTCACTCTGTGGACCAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: FDVCVSLYSLDS*TVCALTLWTRL Trigger: TAGCCTGGTCCACAGAGTGAGTGCACAGACAGTCAAGGAGTCAAGGCTATACAAAGAGACACAAACATCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGCTTCTGGGAAAAGCTCCTTTCTGATGGAAGAGAGCTTCAGGTCAGGATACAAACACTCTGTCACTaGAAAAGCCAGATACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GGFWEKLLSDGRELQVRIQTLCH*KSQIQK Trigger: TTTTTGTATCTGGCTTTTGCAGTGACAGAGTGTTTG...TATCCTGACCTGAAGCTCTCTTCCATCAGAAAGGAGCTTTTCCCAGAAGCCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCGGGAATGCTTGGATTTaGGGGCCATGTACATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVGNAWI*GPCTWR Trigger: TCGCCATGTACATGGCCCCCAAATCCAAGCATTCCC...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CAA 72 bp | CTCTGTGATAATCACCGTCTTCTCCAAGAAGAAACTTaGATGAGCATTGAGCAATGGGACTGTTCTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCDNHRLLQEET*MSIEQWDCSMG Trigger: ACCCATAGAACAGTCCCATTGCTCAATGCTCATCAAAGTTTCTTCTTGGAGAAGACGGTGATTATCACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTAAAATGTCTGAAGTATaGATGAAGCAAAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSKMSEV*MKQRRC Trigger: GCATCTCCTTTGCTTCATGCATACTTCAGACATTTT...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAGACGAACAGGCGTTTGAGTGTACATGTTCATCATAGTCTTAAAAAGGCTGACCATCACAGAGCCTaGAAAAAGAACGACTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WQTNRRLSVHVHHSLKKADHHRA*KKNDLI Trigger: AATCAAGTCGTTCTTTTTGCAGGCTCTGTGATGGTC...AGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAATGGTTGACTTTTTGTaGCCCACAGAATGGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRMVDFL*PTEWES Trigger: AGACTCCCATTCTGTGGGCCACAAAAAGTCAACCAT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAGACGAACAGGCGTTTGAGTGTACATGTTCATCATAGTCTTAAAAAGGCTATACTCTCCAGCTCATaGTCAGTGTGTATTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WQTNRRLSVHVHHSLKKAILSSS*SVCISK Trigger: CTTTGAAATACACACTGATCATGAGCTGGAGAGTAT...AGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAGCAAAAAGAACGACTTaGTTGAGTCTTGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRAKRTT*LSLVSA Trigger: TGCAGACACAAGACTCAATCAAGTCGTTCTTTTTGC...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAGTGTATTTCAAAGGATaGCAGATAGCTACAAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRVYFKG*QIATKR Trigger: TCGCTTTGTAGCTATCTGTCATCCTTTGAAATACAC...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAATACTCTCCAGCTCATaGTCAGTGTGTATTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRILSSS*SVCISK Trigger: CTTTGAAATACACACTGATCATGAGCTGGAGAGTAT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCAAAATGTCTGAAGTATaGATGAAGCAAAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSKMSEV*MKQRRC Trigger: GCATCTCCTTTGCTTCATGCATACTTCAGACATTTT...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAAACACTGTTCCCTAATAGTCTATCACACCTCTGTCATGTATGATTCCCAAACACTCTGTCACTaGAAAAGCCAGATACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARKHCSLIVYHTSVMYDSQTLCH*KSQIQK Trigger: TTTTTGTATCTGGCTTTTGCAGTGACAGAGTGTTTG...GGAATCATACATGACAGAGGTGTGATAGACTATTAGGGAACAGTGTTTTCTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCGACCATCACAGAGCCTaGAAAAAGAACGACTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCDHHRA*KKNDLI Trigger: AATCAAGTCGTTCTTTTTGCAGGCTCTGTGATGGTC...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCGCAAAAAGAACGACTTaGTTGAGTCTTGTGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVAKRTT*LSLVSA Trigger: TGCAGACACAAGACTCAATCAAGTCGTTCTTTTTGC...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCTACAAAGCGATCATATaGCATCACTACCAGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCYKAII*HHYQNQ Trigger: TTGATTCTGGTAGTGATGTCATATGATCGCTTTGTA...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCGTGTATTTCAAAGGATaGCAGATAGCTACAAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVVYFKG*QIATKR Trigger: TCGCTTTGTAGCTATCTGTCATCCTTTGAAATACAC...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGTACTTTACTGTTTGGTGGTCAACTTACCATAAAGAAAATTGACTCTGTCATACTCTCCAGCTCATaGTCAGTGTGTATTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTLLFGGQLTIKKIDSVILSSS*SVCISK Trigger: CTTTGAAATACACACTGATCATGAGCTGGAGAGTAT...GACAGAGTCAATTTTCTTTATGGTAAGTTGACCACCAAACAGTAAAGTACTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR GCA 90 bp | TGGACATCTGTCTGCACTCTGGTCATCTACTTTCTTATTGATTCTGTACTCATTAAAATGTCTGAAGTATaGATGAAGCAAAGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: WTSVCTLVIYFLIDSVLIKMSEV*MKQRRC Trigger: GCATCTCCTTTGCTTCATGCATACTTCAGACATTTT...AATGAGTACAGAATCAATAAGAAAGTAGATGACCAGAGTGCAGACAGATGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| 3UTR CAA 72 bp | CCACAGATTTATTTCCCCTTCCCTTTCCACCCAAATTaGTGTAGTACATTATGTATTGCTCATATATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PQIYFPFPFHPN*CSTLCIAHISL Trigger: CAAGGATATATGAGCAATACATAATGTACTACACAAATTTGGGTGGAAAGGGAAGGGGAAATAAATCTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTGGACCAGGCTAGCTTCAAATTCAGATCTGCCTGCCTCTGCCTCCTGTGTTCTTGGGAATGCTaGGATTTGGGGGCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HSVDQASFKFRSACLCLLCSWEC*DLGAMY Trigger: GTACATGGCCCCCAAATCCAAGCATTCCCAAGAACA...CAGGAGGCAGAGGCAGGCAGATCTGAATTTGAAGCTAGCCTGGTCCACAGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS CCA 90 bp | ACTTTTTGTGGCCCACAGAATGGGAGTCTTAGAATGAGCGTGATATaGAGTGAGGCCAAGAGGAAGCTAAACACCCAGCAAGTAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TFCGPQNGSLRMSVI*SEAKRKLNTQQVAA Trigger: GGCTGCTACTTGCTGGGTGTTTAGCTTCCTCTTGGCCTCACTCCATATCACGCTCATTCTAAGACTCCCATTCTGTGGGCCACAAAAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000101461.2 ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTTGGGAATGCTTGGATTaGGGGGCCATGTACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSWECLD*GAMYMA Trigger: CGCCATGTACATGGCCCCCAAATCCAAGCATTCCCA...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGACGAACAGGCGTTTGAGTGTACATGTTCATCATAGTCTTAAAAAGGCTTGGGAATGCTTGGATTaGGGGGCCATGTACATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WQTNRRLSVHVHHSLKKAWECLD*GAMYMA Trigger: CGCCATGTACATGGCCCCCAAATCCAAGCATTCCCA...AGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTTGTTCTTGGGAATGCTaGGATTTGGGGGCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSCSWEC*DLGAMY Trigger: GTACATGGCCCCCAAATCCAAGCATTCCCAAGAACA...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTGGGAAAAGTGAAATCGAGGAATAATGTCAGACCACCTCCAGTAGGATCTAAAATGGTTGACTTTTaGTGGCCCACAGAATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WLGKVKSRNNVRPPPVGSKMVDF*WPTEWE Trigger: CTCCCATTCTGTGGGCCACAAAAAGTCAACCATTTT...AGATCCTACTGGAGGTGGTCTGACATTATTCCTCGATTTCACTTTTCCCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TGGCAGACGAACAGGCGTTTGAGTGTACATGTTCATCATAGTCTTAAAAAGGCTTGTTCTTGGGAATGCTaGGATTTGGGGGCCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: WQTNRRLSVHVHHSLKKACSWEC*DLGAMY Trigger: GTACATGGCCCCCAAATCCAAGCATTCCCAAGAACA...AGCCTTTTTAAGACTATGATGAACATGTACACTCAAACGCCTGTTCGTCTGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TCAAAGAAATGTTTCTCTCTGAGCCTGGAGAAAGGGGTTTTAAACCATGGTAGAAAAATGGTTGACTTTTaGTGGCCCACAGAATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SKKCFSLSLEKGVLNHGRKMVDF*WPTEWE Trigger: CTCCCATTCTGTGGGCCACAAAAAGTCAACCATTTT...TCTACCATGGTTTAAAACCCCTTTCTCCAGGCTCAGAGAGAAACATTTCTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTAACTTGTCTTCCAAGATCTTCTACATGCTGTCTAGCAGCTGTTAACTGCAAAATGGTTGACTTTTaGTGGCCCACAGAATGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLTCLPRSSTCCLAAVNCKMVDF*WPTEWE Trigger: CTCCCATTCTGTGGGCCACAAAAAGTCAACCATTTT...GCAGTTAACAGCTGCTAGACAGCATGTAGAAGATCTTGGAAGACAAGTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS CCA 72 bp | CCTTTCTGCGACCCTCCCCTGAGTGGATTCCGAGAATaGCCACCAGGATTCGTGTATAGGAGACTAACACCA | + |
|
Preference number: 6 (lower is better) Translates to: PFCDPPLSGFRE*PPGFVYRRLTP Trigger: TGGTGTTAGTCTCCTATACACGAATCCTGGTGGCCATTCTCGGAATCCACTCAGGGGAGGGTCGCAGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000101461.2 ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||
| CDS CCA 72 bp | GGCCCACAGAATGGGAGTCTTAGAATGAGCGTGATATaGAGTGAGGCCAAGAGGAAGCTAAACACCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GPQNGSLRMSVI*SEAKRKLNTQQ Trigger: TTGCTGGGTGTTTAGCTTCCTCTTGGCCTCACTCCATATCACGCTCATTCTAAGACTCCCATTCTGTGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101461.2 ENSMUST00000215369.2 ENSMUST00000215686.2 ENSMUST00000216199.2 |
||