Pregenerated sensors for OLFR444 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073110Ensembl transcript IDs: ENSMUST00000204092.3
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAATGTCACAGTGTTAACCAGTAAGTATTTAAGACCAATCATATaGATACCATGGTTTCTGGTTCCTAAGTCTAAGAGGTATAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: LNVTVLTSKYLRPII*IPWFLVPKSKRYRA Trigger: AGCCCTATACCTCTTAGACTTAGGAACCAGAAACCATGGTATTCATATGATTGGTCTTAAATACTTACTGGTTAACACTGTGACATTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGAGGTATAGGGCTGTTATCCCAGACTTCACTAGCCAGGGTTTTAGAACTAAGGCAAGTGAATGCTaGCTAATATATAGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SKRYRAVIPDFTSQGFRTKASEC*LIYRPG Trigger: TCCTGGTCTATATATTAGTCAGCATTCACTTGCCTT...AGTTCTAAAACCCTGGCTAGTGAAGTCTGGGATAACAGCCCTATACCTCTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGAGGTATAGGGCTGTTATCCCAGACTTCACTAGCCAGGGTTTTAGAATGCTGCAGTTCAGGGTaGTGGGATTTAGGGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: SLRGIGLLSQTSLARVLECCSSG*WDLGAM Trigger: CATGGCCCCTAAATCCCAGCACCCTGAACTGCAGCA...TTCTAAAACCCTGGCTAGTGAAGTCTGGGATAACAGCCCTATACCTCTTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR CCA 90 bp | CCATGGTTTCTGGTTCCTAAGTCTAAGAGGTATAGGGCTGTTATCCCAGACTTCTGCAGTTCAGGGTGCTaGGATTTAGGGGCCATGTAC | + |
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Preference number: 4 (lower is better) Translates to: PWFLVPKSKRYRAVIPDFCSSGC*DLGAMY Trigger: GTACATGGCCCCTAAATCCCAGCACCCTGAACTGCA...GAAGTCTGGGATAACAGCCCTATACCTCTTAGACTTAGGAACCAGAAACCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR GCA 90 bp | TACCATGGTTTCTGGTTCCTAAGTCTAAGAGGTATAGGGCTGTTATCCCAGACTGGATGGTCACCAGGATaGGTGTGTAGGAGACTAGCA | + |
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Preference number: 4 (lower is better) Translates to: YHGFWFLSLRGIGLLSQTGWSPG*VCRRLA Trigger: TGCTAGTCTCCTACACACGCATCCTGGTGACCATCC...AGTCTGGGATAACAGCCCTATACCTCTTAGACTTAGGAACCAGAAACCATGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR TCA 90 bp | TCATATGAATACCATGGTTTCTGGTTCCTAAGTCTAAGAGGTATAGGGCTGTTAGGGGCCCCACTAAGATaGACACACAGGCTGCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SYEYHGFWFLSLRGIGLLGAPLR*THRLLR Trigger: TCTTAGCAGCCTGTGTGTTCATCTTAGTGGGGCCCC...TAACAGCCCTATACCTCTTAGACTTAGGAACCAGAAACCATGGTATTCATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR TCA 90 bp | TCATATGAATACCATGGTTTCTGGTTCCTAAGTCTAAGAGGTATAGGGCTGTTAGCAGAGTTACCTCTGTaGTCCATGTCTGGTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SYEYHGFWFLSLRGIGLLAELPL*SMSGWL Trigger: GAGCCAACCAGACATGGATCACAGAGGTAACTCTGC...TAACAGCCCTATACCTCTTAGACTTAGGAACCAGAAACCATGGTATTCATATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR TCA 90 bp | TCTAAGAGGTATAGGGCTGTTATCCCAGACTTCACTAGCCAGGGTTTTAGAACTGAGATGGTTCTTCTTTaGGTTACAAGATTTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKRYRAVIPDFTSQGFRTEMVLL*VTRFAS Trigger: GCTGGCAAATCTTGTAACTCAAAGAAGAACCATCTC...AGTTCTAAAACCCTGGCTAGTGAAGTCTGGGATAACAGCCCTATACCTCTTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR GCA 90 bp | TCATATGAATACCATGGTTTCTGGTTCCTAAGTCTAAGAGGTATAGGGCTGTTAGAAAGGATCTTCTGCTaGAGTTCAGGGTGCTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SYEYHGFWFLSLRGIGLLERIFC*SSGCWD Trigger: ATCCCAGCACCCTGAACTGCAGCAGAAGATCCTTTC...TAACAGCCCTATACCTCTTAGACTTAGGAACCAGAAACCATGGTATTCATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGAGGTATAGGGCTGTTATCCCAGACTTCACTAGCCAGGGTTTTAGAATTGAGTTACAAGATTTaGCAGCATCTTAGGGACATT | + |
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Preference number: 4 (lower is better) Translates to: SLRGIGLLSQTSLARVLELSYKI*QHLRDI Trigger: AATGTCCCTAAGATGCTGGCAAATCTTGTAACTCAA...TTCTAAAACCCTGGCTAGTGAAGTCTGGGATAACAGCCCTATACCTCTTAGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR CAA 90 bp | CCTAAGTCTAAGAGGTATAGGGCTGTTATCCCAGACTTCACTAGCCAGGGTTTTGGTATGTGCAGTCTGTaGTCCAGGCAGATTACTACA | + |
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Preference number: 5 (lower is better) Translates to: PKSKRYRAVIPDFTSQGFGMCSL*SRQITT Trigger: TGTAGTAATCTGCCTGGACAACAGACTGCACATACC...AAAACCCTGGCTAGTGAAGTCTGGGATAACAGCCCTATACCTCTTAGACTTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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| CDS-3UTR CAA 90 bp | CCTAAGTCTAAGAGGTATAGGGCTGTTATCCCAGACTTCACTAGCCAGGGTTTTGGAGATGGTTCTTCTTaGAGTTACAAGATTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: PKSKRYRAVIPDFTSQGFGDGSS*SYKICQ Trigger: CTGGCAAATCTTGTAACTCAAAGAAGAACCATCTCC...AAAACCCTGGCTAGTGAAGTCTGGGATAACAGCCCTATACCTCTTAGACTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204092.3 |
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