Pregenerated sensors for OLFR44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062649Ensembl transcript IDs: ENSMUST00000215065.3
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCTAATGCCCTCTTCTGGCGTGTCTGAAGACAGCTACAATGGGTaGGGCCAGAGAAGGACCAGAGTGAGAGCTGGAGAGATGGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: DLMPSSGVSEDSYNG*GQRRTRVRAGEMVQ Trigger: CTGAACCATCTCTCCAGCTCTCACTCTGGTCCTTCTCTGGCCCCACCCATTGTAGCTGTCTTCAGACACGCCAGAAGAGGGCATTAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CCA 90 bp | AGACAGCTACAATGGGTGGGGCCAGAGAAGGACCAGAGTGAGAGCTaGAGAGATGGTTCAGTGGTTAGGAGCACCGACTTCTCATTCCAG | + |
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Preference number: 1 (lower is better) Translates to: RQLQWVGPEKDQSES*RDGSVVRSTDFSFQ Trigger: CTGGAATGAGAAGTCGGTGCTCCTAACCACTGAACCATCTCTCCAGCTCTCACTCTGGTCCTTCTCTGGCCCCACCCATTGTAGCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 90 bp | TCTCAACCATCAGTAATGAGACCTAATGCCCTCTTCTGGCGTGTCTaGAGACAGCTACAATGGGTGGGGCCAGAGAAGGACCAGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: SQPSVMRPNALFWRV*RQLQWVGPEKDQSE Trigger: CTCACTCTGGTCCTTCTCTGGCCCCACCCATTGTAGCTGTCTTCAGACACGCCAGAAGAGGGCATTAGGTCTCATTACTGATGGTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CCA 90 bp | GTCCATCTACAATGCAACCACTCCACCTCAGGCTCAGGGAACATTTaGGAAGATAATGTAAAAATTCCAAGATCAAGAGGACAAGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: VHLQCNHSTSGSGNI*EDNVKIPRSRGQGS Trigger: ACTTCCTTGTCCTCTTGATCTTGGAATTTTTACATTATCTTCCCAAATGTTCCCTGAGCCTGAGGTGGAGTGGTTGCATTGTAGATGGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 90 bp | CATAGACAGAGAGACAGAGACAGAGAGATAGAGAGGAAACTAATTTaGGAAAAAGAAGAGGGAAAAGGAGAATGGTTGAAGGGAGATGGG | + |
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Preference number: 1 (lower is better) Translates to: HRQRDRDREIERKLI*EKEEGKGEWLKGDG Trigger: CCCATCTCCCTTCAACCATTCTCCTTTTCCCTCTTCTTTTTCTCAAATTAGTTTCCTCTCTATCTCTCTGTCTCTGTCTCTCTGTCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 90 bp | AGTATGTTTTATATCTTAGCTAGGAGCAGCCCACTATACTTATACTaGGCCTCTCACAAAATACAAGGACAGAGACAAGCTGAAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: SMFYILARSSPLYLY*ASHKIQGQRQAEVK Trigger: CTTGACTTCAGCTTGTCTCTGTCCTTGTATTTTGTGAGAGGCTCAGTATAAGTATAGTGGGCTGCTCCTAGCTAAGATATAAAACATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 90 bp | ATACTTATACTGAGCCTCTCACAAAATACAAGGACAGAGACAAGCTaGAGTCAAGTGAATGTAAAACAAATGCCTTGTATCCAATTCTCA | + |
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Preference number: 1 (lower is better) Translates to: ILILSLSQNTRTETS*SQVNVKQMPCIQFS Trigger: TGAGAATTGGATACAAGGCATTTGTTTTACATTCACTTGACTTCAGCTTGTCTCTGTCCTTGTATTTTGTGAGAGGCTCAGTATAAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCAAGAGAAGGACCAGAGTaGGAGCTGGAGAGATGGTTC | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGAREGPE*ELERWF Trigger: GAACCATCTCTCCAGCTCTCACTCTGGTCCTTCTCT...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCACACTTCTGGAGGTCCTaGGTTCAAATCCCAGCAACC | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGAHFWRS*VQIPAT Trigger: GGTTGCTGGGATTTGAACCCAGGACCTCCAGAAGTG...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCAAGAACAGATCTGCTGTaGACCAGTACCCTACTCTGT | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGARTDLL*TSTLLC Trigger: ACAGAGTAGGGTACTGGTCCACAGCAGATCTGTTCT...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCACCAGCAACCACATGGTaGCTCTCAACCATCAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGAPATTW*LSTISN Trigger: ATTACTGATGGTTGAGAGCCACCATGTGGTTGCTGG...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCACAGACTCTCCCTTACTaGAGATACCTAAATCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGAQTLPY*RYLNPN Trigger: ATTTGGATTTAGGTATCTCCAGTAAGGGAGAGTCTG...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCAAAGACTGCTCTTCAGTaGATCATGCAAAAGTATGTT | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGAKTALQ*IMQKYV Trigger: AACATACTTTTGCATGATGCACTGAAGAGCAGTCTT...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCATGGGCAATGCAACATTaGTATATAGAACAATGTAGT | + |
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Preference number: 2 (lower is better) Translates to: QKGNARVVTWKWVGGKGAWAMQH*YIEQCS Trigger: ACTACATTGTTCTATATACCAATGTTGCATTGCCCA...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR GCA 90 bp | TCTACCTTGGGATACAGACTGTTTCTCTCTCATCACCAAGACTGCTCTTCAGTGCACTGTAGATGGGATTaGAAATTGGTGCAGCCACTT | + |
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Preference number: 2 (lower is better) Translates to: STLGYRLFLSHHQDCSSVHCRWD*KLVQPL Trigger: AAGTGGCTGCACCAATTTGCAATCCCATCTACAGTG...CACTGAAGAGCAGTCTTGGTGATGAGAGAGAAACAGTCTGTATCCCAAGGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGCCTCTCACAAAATACAAGGACAGAGACAAGCTGAAGTCAAGTGAATGTGGGATTGCAAATTGGTaGAGCCACTTTGGAAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: TEPLTKYKDRDKLKSSECGIANW*SHFGSR Trigger: CCTACTTCCAAAGTGGCTGCACCAATTTGCAATCCC...ACATTCACTTGACTTCAGCTTGTCTCTGTCCTTGTATTTTGTGAGAGGCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | CACTCCACCTCAGGCTCAGGGAACATTTGGGAAGATAATGTAAAAATTCCAAGAGAGGGAAAAGGAGAATaGTTGAAGGGAGATGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HSTSGSGNIWEDNVKIPREGKGE*LKGDGR Trigger: TCTCCCATCTCCCTTCAACCATTCTCCTTTTCCCTC...TCTTGGAATTTTTACATTATCTTCCCAAATGTTCCCTGAGCCTGAGGTGGAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGAGCCTCTCACAAAATACAAGGACAGAGACAAGCTGAAGTCAAGTGAATGTGATGGGATTGCAAATTaGTGCAGCCACTTTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: TEPLTKYKDRDKLKSSECDGIAN*CSHFGS Trigger: ACTTCCAAAGTGGCTGCACCAATTTGCAATCCCATC...ACATTCACTTGACTTCAGCTTGTCTCTGTCCTTGTATTTTGTGAGAGGCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | TTCACTGTAGATGGGATTGCAAATTGGTGCAGCCACTTTGGAAGTAGGTTGGTGATGGTTGAAGGGAGATaGGAGAAATGGTATAATTAT | + |
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Preference number: 2 (lower is better) Translates to: FTVDGIANWCSHFGSRLVMVEGR*EKWYNY Trigger: ATAATTATACCATTTCTCCCATCTCCCTTCAACCAT...CACCAACCTACTTCCAAAGTGGCTGCACCAATTTGCAATCCCATCTACAGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAAAGACAACAAATATGAGGAGGATATAGGAAAGGGTAACCCTCCTTCAGTTGACATACCAATGTaGACAGGGGAAATTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: KAKDNKYEEDIGKGNPPSVDIPM*TGEISG Trigger: CCCTGAAATTTCCCCTGTCCACATTGGTATGTCAAC...TGAAGGAGGGTTACCCTTTCCTATATCCTCCTCATATTTGTTGTCTTTTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CCA 90 bp | TTCACTGTAGATGGGATTGCAAATTGGTGCAGCCACTTTGGAAGTAGGTTGGTGGGCTCAGGGAACATTTaGGAAGATAATGTAAAAATT | + |
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Preference number: 2 (lower is better) Translates to: FTVDGIANWCSHFGSRLVGSGNI*EDNVKI Trigger: AATTTTTACATTATCTTCCCAAATGTTCCCTGAGCC...CACCAACCTACTTCCAAAGTGGCTGCACCAATTTGCAATCCCATCTACAGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGAGCCTCTCACAAAATACAAGGACAGAGACAAGCTGAAGTCAAGTGAATGTAAAAGACAACAAATATaGGGAGGATATAGGAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: TEPLTKYKDRDKLKSSECKRQQI*GGYRKG Trigger: CCCTTTCCTATATCCTCCTCATATTTGTTGTCTTTT...ACATTCACTTGACTTCAGCTTGTCTCTGTCCTTGTATTTTGTGAGAGGCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR GCA 90 bp | ACTGAGCCTCTCACAAAATACAAGGACAGAGACAAGCTGAAGTCAAGTGAATGTTGGAAATACACTTTCTaGAGTGTCTATGAACATGTT | + |
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Preference number: 2 (lower is better) Translates to: TEPLTKYKDRDKLKSSECWKYTF*SVYEHV Trigger: AACATGTTCATAGACACTGCAGAAAGTGTATTTCCA...ACATTCACTTGACTTCAGCTTGTCTCTGTCCTTGTATTTTGTGAGAGGCTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAAAGACAACAAATATGAGGAGGATATAGGAAAGGGTAACCCTCCTTCAATAGCTAGGGAAACATaGACACATCCTTCATATATG | + |
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Preference number: 2 (lower is better) Translates to: KAKDNKYEEDIGKGNPPSIARET*THPSYM Trigger: CATATATGAAGGATGTGTTCATGTTTCCCTAGCTAT...TGAAGGAGGGTTACCCTTTCCTATATCCTCCTCATATTTGTTGTCTTTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CAA 90 bp | TATGATGAAAATTATATCCACATAAACCTTTCAAAGTATTCTACCTaGGGATACAGACTGTTTCTCTCTCATCACCAAGACTGCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: YDENYIHINLSKYST*GYRLFLSHHQDCSS Trigger: TGAAGAGCAGTCTTGGTGATGAGAGAGAAACAGTCTGTATCCCAAGGTAGAATACTTTGAAAGGTTTATGTGGATATAATTTTCATCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 72 bp | TCAGTAATGAGACCTAATGCCCTCTTCTGGCGTGTCTaGAGACAGCTACAATGGGTGGGGCCAGAGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SVMRPNALFWRV*RQLQWVGPEKD Trigger: GTCCTTCTCTGGCCCCACCCATTGTAGCTGTCTTCAGACACGCCAGAAGAGGGCATTAGGTCTCATTACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CAA 90 bp | CAAAAGGGTAATGCCAGGGTGGTGACTTGGAAGTGGGTAGGTGGGAAAGGGGCAAGATGGGATTGCAAATaGGTGCAGCCACTTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: QKGNARVVTWKWVGGKGARWDCK*VQPLWK Trigger: CTTCCAAAGTGGCTGCACCAATTTGCAATCCCATCT...TGCCCCTTTCCCACCTACCCACTTCCAAGTCACCACCCTGGCATTACCCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CAA 90 bp | TCTACCTTGGGATACAGACTGTTTCTCTCTCATCACCAAGACTGCTCTTCAGTGCTGGGGGCTGAAGAGTaGGCTCAGCAGTTAAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: STLGYRLFLSHHQDCSSVLGAEE*AQQLRA Trigger: TGCTCTTAACTGCTGAGCCAACTCTTCAGCCCCCAG...CACTGAAGAGCAGTCTTGGTGATGAGAGAGAAACAGTCTGTATCCCAAGGTAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 72 bp | CACACACACATGCCTAGTGAACAACTGATGGTGGGATaGAGAGCCACACTTTGTCCATCTACAATGCAACCA | + |
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Preference number: 3 (lower is better) Translates to: HTHMPSEQLMVG*RATLCPSTMQP Trigger: TGGTTGCATTGTAGATGGACAAAGTGTGGCTCTTCATCCCACCATCAGTTGTTCACTAGGCATGTGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 72 bp | ACAGACACACACACACACACATGCCTAGTGAACAACTaGTGGTGGGATGAAGAGCCACACTTTGTCCATCTA | + |
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Preference number: 3 (lower is better) Translates to: TDTHTHTCLVNN*WWDEEPHFVHL Trigger: TAGATGGACAAAGTGTGGCTCTTCATCCCACCATCAGTTGTTCACTAGGCATGTGTGTGTGTGTGTGTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CAA 90 bp | TACACTTCTGGAGGTCCTGGGTTCAAATCCCAGCAACCACATGGTGGCTCTCAACTATACCCAAAAGTCTaGACAGTCTGTATTTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: YTSGGPGFKSQQPHGGSQLYPKV*TVCISD Trigger: ATCTGAAATACAGACTGTCAAGACTTTTGGGTATAG...TTGAGAGCCACCATGTGGTTGCTGGGATTTGAACCCAGGACCTCCAGAAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CCA 72 bp | CAATGCAACCACTCCACCTCAGGCTCAGGGAACATTTaGGAAGATAATGTAAAAATTCCAAGATCAAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: QCNHSTSGSGNI*EDNVKIPRSRG Trigger: TCCTCTTGATCTTGGAATTTTTACATTATCTTCCCAAATGTTCCCTGAGCCTGAGGTGGAGTGGTTGCATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAAAAGACAACAAATATGAGGAGGATATAGGAAAGGGTAACCCTCCTTCACTGGGGGTGTTTTTATaGGAGAAGAAGAAAGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: KAKDNKYEEDIGKGNPPSLGVFL*EKKKGN Trigger: ATTTCCTTTCTTCTTCTCCAATAAAAACACCCCCAG...TGAAGGAGGGTTACCCTTTCCTATATCCTCCTCATATTTGTTGTCTTTTGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 72 bp | AAAATTCCAAGATCAAGAGGACAAGGAAGTCTGCAGTaGTATTATTTCATCTATGAATGCCCGGAAAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: KIPRSRGQGSLQ*YYFIYECPESS Trigger: GCTACTTTCCGGGCATTCATAGATGAAATAATATCACTGCAGACTTCCTTGTCCTCTTGATCTTGGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR GCA 72 bp | TTGGGATACAGACTGTTTCTCTCTCATCACCAAGACTaGTCTTCAGTGCATCATGCAAAAGTATGTTTTATA | + |
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Preference number: 3 (lower is better) Translates to: LGYRLFLSHHQD*SSVHHAKVCFI Trigger: TATAAAACATACTTTTGCATGATGCACTGAAGAGCAGTCTTGGTGATGAGAGAGAAACAGTCTGTATCCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CCA 72 bp | CAAGAACCAAATATAATATCAGTTGACATACCAATGTaGACAGGGGAAATTTCAGGGGAATCCACTCTTACA | + |
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Preference number: 3 (lower is better) Translates to: QEPNIISVDIPM*TGEISGESTLT Trigger: TGTAAGAGTGGATTCCCCTGAAATTTCCCCTGTCCACATTGGTATGTCAACTGATATTATATTTGGTTCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR-3UTR CAA 90 bp | ACCGACTTCTCATTCCAGCTTGATGAAGTCATCATATTAGAAACAGAAACAAATCTGCAATACTACTTCTaGGTCTATACCCAAAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: TDFSFQLDEVIILETETNLQYYF*VYTQKS Trigger: AGACTTTTGGGTATAGACCAAGAAGTAGTATTGCAG...ATTTGTTTCTGTTTCTAATATGATGACTTCATCAAGCTGGAATGAGAAGTCGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 72 bp | ATTATTTCATCTATGAATGCCCGGAAAGTAGCATCATaGAATTTCAACAATATAGTTCCCAAAGCAAGAACC | + |
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Preference number: 3 (lower is better) Translates to: IISSMNARKVAS*NFNNIVPKART Trigger: GGTTCTTGCTTTGGGAACTATATTGTTGAAATTTCATGATGCTACTTTCCGGGCATTCATAGATGAAATAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR TCA 72 bp | CTGCAATACTACTTCTTGGTCTATACCCAAAAGTCTTaGCAGTCTGTATTTCAGATTATTTTTACCCATGTT | + |
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Preference number: 3 (lower is better) Translates to: LQYYFLVYTQKS*QSVFQIIFTHV Trigger: AACATGGGTAAAAATAATCTGAAATACAGACTGTCAAGACTTTTGGGTATAGACCAAGAAGTAGTATTGCAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| CDS-3UTR TCA 90 bp | TTCACTGTAGATGGGATTGCAAATTGGTGCAGCCACTTTGGAAGTAGGTTGGTGGAAGCCTGTGTGAGCTaGTGCACAGATCACACCAAT | + |
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Preference number: 4 (lower is better) Translates to: FTVDGIANWCSHFGSRLVEACVS*CTDHTN Trigger: ATTGGTGTGATCTGTGCATCAGCTCACACAGGCTTC...CACCAACCTACTTCCAAAGTGGCTGCACCAATTTGCAATCCCATCTACAGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| CDS-3UTR TCA 90 bp | ACCGACTTCTCATTCCAGCTTGATGAAGTCATCATATTAGAAACAGAAACAAATGAGTTCTGGCTTCTCTaGGAGCCCTGCCAAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TDFSFQLDEVIILETETNEFWLL*EPCQEE Trigger: TTCTTCTTGGCAGGGCTCTCAGAGAAGCCAGAACTC...ATTTGTTTCTGTTTCTAATATGATGACTTCATCAAGCTGGAATGAGAAGTCGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| CDS-3UTR TCA 90 bp | CACTCCACCTCAGGCTCAGGGAACATTTGGGAAGATAATGTAAAAATTCCAAGAATGGCTGAAGGTACATaGATGCTAGAGATCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: HSTSGSGNIWEDNVKIPRMAEGT*MLEIQR Trigger: TCTTTGGATCTCTAGCATTCATGTACCTTCAGCCAT...TCTTGGAATTTTTACATTATCTTCCCAAATGTTCCCTGAGCCTGAGGTGGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| CDS-3UTR TCA 90 bp | AAAGCAAAAGACAACAAATATGAGGAGGATATAGGAAAGGGTAACCCTCCTTCACACAGAAATAGTGGTTaGTCACATCTAATTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KAKDNKYEEDIGKGNPPSHRNSG*SHLICR Trigger: TCTGCAAATTAGATGTGATCAACCACTATTTCTGTG...TGAAGGAGGGTTACCCTTTCCTATATCCTCCTCATATTTGTTGTCTTTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CAA 72 bp | CCTGCAATACTACTTCTTGGTCTATACCCAAAAGTCTaGACAGTCTGTATTTCAGATTATTTTTACCCATGT | + |
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Preference number: 4 (lower is better) Translates to: PAILLLGLYPKV*TVCISDYFYPC Trigger: ACATGGGTAAAAATAATCTGAAATACAGACTGTCAAGACTTTTGGGTATAGACCAAGAAGTAGTATTGCAGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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| 3UTR CAA 72 bp | AATTATATCCACATAAACCTTTCAAAGTATTCTACCTaGGGATACAGACTGTTTCTCTCTCATCACCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: NYIHINLSKYST*GYRLFLSHHQD Trigger: GTCTTGGTGATGAGAGAGAAACAGTCTGTATCCCAAGGTAGAATACTTTGAAAGGTTTATGTGGATATAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215065.3 |
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