Pregenerated sensors for OLFR437 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071481Ensembl transcript IDs: ENSMUST00000060243.5, ENSMUST00000205175.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACAGCCACACCCAGCTTCTCTTGTATCTGTGTTGAGATCCAAACCTaGGTCCTCATGCAGCAAATGTTCTTCGTGACTGAGCCACCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TATPSFSCICVEIQT*VLMQQMFFVTEPPL Trigger: GAGTGGTGGCTCAGTCACGAAGAACATTTGCTGCATGAGGACCAAGGTTTGGATCTCAACACAGATACAAGAGAAGCTGGGTGTGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGTCCCTTATTGAAACAGAAGTTTCACTGTCAGCCATCAAACTTTAGCAATAGCAAATGTTCTTCGTaGCTGAGCCACCACTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QGPLLKQKFHCQPSNFSNSKCSS*LSHHSS Trigger: GCTGGAGTGGTGGCTCAGTCACGAAGAACATTTGCT...ATTGCTAAAGTTTGATGGCTGACAGTGAAACTTCTGTTTCAATAAGGGACCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CCA 90 bp | CACCCCTGCAATAAATCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGTCAAACTCCAGGACTTaGGAGATAGAGGCAGGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: HPCNKSHLVIVFDASCFQSNSRT*EIEAGV Trigger: TACGCCTGCCTCTATCTCCCAAGTCCTGGAGTTTGA...CTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGATTTATTGCAGGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 90 bp | GCGTTGCATATGTGCAAACTACTGCACCCCTGCAATAAATCTCACTaGGTTATAGTATTTGATGCTTCCTGTTTTCAGGTTCTGGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: ALHMCKLLHPCNKSH*VIVFDASCFQVLVS Trigger: AGAAACCAGAACCTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGATTTATTGCAGGGGTGCAGTAGTTTGCACATATGCAACGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTTTACAGATTAAAGAATTTGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTCTCTTGTATCTGTGTTaGGATCCAAACCTTGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLYRLKNLPCVLSLLNVCLLYLC*DPNLGP Trigger: AGGACCAAGGTTTGGATCTCAACACAGATACAAGAG...ACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTTTACAGATTAAAGAATTTGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTCCTGTTTTCAGGTTCTaGTTTCTGGTTTGGGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLYRLKNLPCVLSLLNVCPVFRF*FLVWVE Trigger: CTCAACCCAAACCAGAAACCAGAACCTGAAAACAGG...ACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTTTACAGATTAAAGAATTTGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTAACAGGGTCCCTTATTaGAACAGAAGTTTCACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: TLYRLKNLPCVLSLLNVCNRVPY*NRSFTV Trigger: GACAGTGAAACTTCTGTTTCAATAAGGGACCCTGTT...ACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR TCA 90 bp | CACCCCTGCAATAAATCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGGTTTCTGGTTTGGGTTaGGACTGTGTATATACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: HPCNKSHLVIVFDASCFQVSGLG*DCVYTE Trigger: TTCTGTATATACACAGTCTCAACCCAAACCAGAAAC...CTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGATTTATTGCAGGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR TCA 72 bp | TCCAAACCTTGGTCCTCATGCAGCAAATGTTCTTCGTaGCTGAGCCACCACTCCAGCACTTCATCCCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SKPWSSCSKCSS*LSHHSSTSSLS Trigger: AGATAGGGATGAAGTGCTGGAGTGGTGGCTCAGTCACGAAGAACATTTGCTGCATGAGGACCAAGGTTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR TCA 72 bp | AACCTTGGTCCTCATGCAGCAAATGTTCTTCGTGACTaGGCCACCACTCCAGCACTTCATCCCTATCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: NLGPHAANVLRD*ATTPALHPYLF Trigger: GAATAGATAGGGATGAAGTGCTGGAGTGGTGGCTCAGTCACGAAGAACATTTGCTGCATGAGGACCAAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR TCA 72 bp | GTGTACAGCCACACCCAGCTTCTCTTGTATCTGTGTTaGGATCCAAACCTTGGTCCTCATGCAGCAAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: VYSHTQLLLYLC*DPNLGPHAANV Trigger: AACATTTGCTGCATGAGGACCAAGGTTTGGATCTCAACACAGATACAAGAGAAGCTGGGTGTGGCTGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTTTACAGATTAAAGAATTTGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTCTCAAACTCCAGGACTaGGGAGATAGAGGCAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: TLYRLKNLPCVLSLLNVCLKLQD*GDRGRR Trigger: ACGCCTGCCTCTATCTCCCAAGTCCTGGAGTTTGAG...ACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTGAAACAGGGTCCCTTATTGAAACAGAAGTTTCACTGTCAGCCATCAAACAGTTGGGAAATCTCCTaGACTTTTGCTTTAGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLKQGPLLKQKFHCQPSNSWEIS*TFALVN Trigger: GTTAACTAAAGCAAAAGTCAAGGAGATTTCCCAACT...GTTTGATGGCTGACAGTGAAACTTCTGTTTCAATAAGGGACCCTGTTTCAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGGTTCTGGTTTCTGGTACCTCACAGAAGGACTaGGTAAATGTTCTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHLVIVFDASCFQVLVSGTSQKD*VNVLFP Trigger: AGGAAAGAGAACATTTACCAAGTCCTTCTGTGAGGT...ACCAGAAACCAGAACCTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR GCA 72 bp | TTAACATTTCGCAGTACATTGATTGCGTTGCATATGTaGAAACTACTGCACCCCTGCAATAAATCTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: LTFRSTLIALHM*KLLHPCNKSHL Trigger: CAAGTGAGATTTATTGCAGGGGTGCAGTAGTTTGCACATATGCAACGCAATCAATGTACTGCGAAATGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGGTTCTGGTTTCTGGTAAACAGGGTCCCTTATaGAAACAGAAGTTTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: SHLVIVFDASCFQVLVSGKQGPL*KQKFHC Trigger: ACAGTGAAACTTCTGTTTCAATAAGGGACCCTGTTT...ACCAGAAACCAGAACCTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTTTACAGATTAAAGAATTTGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTACATTTCGCAGTACATaGATTGCGTTGCATATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TLYRLKNLPCVLSLLNVCTFRST*IALHMC Trigger: GCACATATGCAACGCAATCAATGTACTGCGAAATGT...ACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR GCA 72 bp | TTGATTGCGTTGCATATGTGCAAACTACTGCACCCCTaGAATAAATCTCACTTGGTTATAGTATTTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: LIALHMCKLLHP*NKSHLVIVFDA Trigger: AGCATCAAATACTATAACCAAGTGAGATTTATTGCAGGGGTGCAGTAGTTTGCACATATGCAACGCAATCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | CCACACCCAGCTTCTCTTGTATCTGTGTTGAGATCCAAACCTTGGTCCTCATGCACAAGAATGTCTGTGTaGTGCATGGGGCAAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PHPASLVSVLRSKPWSSCTRMSV*CMGQMR Trigger: TCTCATTTGCCCCATGCATCACACAGACATTCTTGT...GCATGAGGACCAAGGTTTGGATCTCAACACAGATACAAGAGAAGCTGGGTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR GCA 90 bp | GTACAAAAGTGTGTACAGCCACACCCAGCTTCTCTTGTATCTGTGTTGAGATCCGTCATAGGACATGGCTaGCAAAATCAAGCACTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VQKCVQPHPASLVSVLRSVIGHG*QNQALR Trigger: TCGGAGTGCTTGATTTTGGCAGCCATGTCCTATGAC...GGATCTCAACACAGATACAAGAGAAGCTGGGTGTGGCTGTACACACTTTTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 72 bp | CCCAGCTTCTCTTGTATCTGTGTTGAGATCCAAACCTaGGTCCTCATGCAGCAAATGTTCTTCGTGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSFSCICVEIQT*VLMQQMFFVTE Trigger: CTCAGTCACGAAGAACATTTGCTGCATGAGGACCAAGGTTTGGATCTCAACACAGATACAAGAGAAGCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 72 bp | TGTGTACAGCCACACCCAGCTTCTCTTGTATCTGTGTaGAGATCCAAACCTTGGTCCTCATGCAGCAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: CVQPHPASLVSV*RSKPWSSCSKC Trigger: ACATTTGCTGCATGAGGACCAAGGTTTGGATCTCAACACAGATACAAGAGAAGCTGGGTGTGGCTGTACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCACTTCATCCCTATCTATTCTGTAGACTTGCTGCTGGTCAATCAAGCTGAGACTGTGGAACAGTaGCAAAATTTTCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LQHFIPIYSVDLLLVNQAETVEQ*QNFLLL Trigger: GAGCAGGAGAAAATTTTGTCACTGTTCCACAGTCTC...AGCTTGATTGACCAGCAGCAAGTCTACAGAATAGATAGGGATGAAGTGCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | TCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGGTTCTGGTTTCTGGTCACATGACCAAGATGTaGCAGCCAGGGCCACACATA | + |
|
Preference number: 4 (lower is better) Translates to: SHLVIVFDASCFQVLVSGHMTKM*QPGPHI Trigger: TATGTGTGGCCCTGGCTGTCACATCTTGGTCATGTG...ACCAGAAACCAGAACCTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | CACCCCTGCAATAAATCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGCCTGCGACCCTCCTTTaGCTGCATTTTCAGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPCNKSHLVIVFDASCFQPATLL*LHFQDC Trigger: ACAATCCTGAAAATGCAGTCAAAGGAGGGTCGCAGG...CTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGATTTATTGCAGGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR GCA 90 bp | ACCCTTTACAGATTAAAGAATTTGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTTGGAAAAGGCCTTCCTaGGACCCTCCTTTGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLYRLKNLPCVLSLLNVCWKRPS*DPPLTA Trigger: TGCAGTCAAAGGAGGGTCGCAGGAAGGCCTTTTCCA...ACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCCCTTATTGAAACAGAAGTTTCACTGTCAGCCATCAAACTTTAGCAATTGGGGTCCAGGCAGATaGCTACTAAGATTATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGPLLKQKFHCQPSNFSNWGPGR*LLRLFH Trigger: ATGGAATAATCTTAGTAGTCATCTGCCTGGACCCCA...ATTGCTAAAGTTTGATGGCTGACAGTGAAACTTCTGTTTCAATAAGGGACCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCCCTTATTGAAACAGAAGTTTCACTGTCAGCCATCAAACTTTAGCAATGATGCATGGGGCAAATaGGATGGTTCTTTTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QGPLLKQKFHCQPSNFSNDAWGK*DGSFLV Trigger: AACCAGAAAAGAACCATCTCATTTGCCCCATGCATC...ATTGCTAAAGTTTGATGGCTGACAGTGAAACTTCTGTTTCAATAAGGGACCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR TCA 90 bp | ATTTTAAAACAAGAATTCCAACAAGGCACAGTAGAACAAGTCTCAAACTCCAGGGAGGCTAAATCCACATaGCCAAGATGTGACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQEFQQGTVEQVSNSREAKST*PRCDSQ Trigger: CTGGCTGTCACATCTTGGTCATGTGGATTTAGCCTC...CCTGGAGTTTGAGACTTGTTCTACTGTGCCTTGTTGGAATTCTTGTTTTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR CCA 90 bp | GTACAAAAGTGTGTACAGCCACACCCAGCTTCTCTTGTATCTGTGTTGAGATCCGGGTTAAAGAGACTGTaGAACAGTGACAAAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQKCVQPHPASLVSVLRSGLKRL*NSDKIF Trigger: GAAAATTTTGTCACTGTTCCACAGTCTCTTTAACCC...GGATCTCAACACAGATACAAGAGAAGCTGGGTGTGGCTGTACACACTTTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR GCA 90 bp | ATTTTAAAACAAGAATTCCAACAAGGCACAGTAGAACAAGTCTCAAACTCCAGGCGACCCTCCTTTGACTaGATTTTCAGGATTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILKQEFQQGTVEQVSNSRRPSFD*IFRIVQ Trigger: CTGGACAATCCTGAAAATGCAGTCAAAGGAGGGTCG...CCTGGAGTTTGAGACTTGTTCTACTGTGCCTTGTTGGAATTCTTGTTTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR GCA 90 bp | TTCAGTCTCTCCCAGTCTGTAAATAAAAGTGGCTCTCAATATTGGAATTCAATCACAGATCTCTTCTTCTaGAGTGCTCTGTGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLSQSVNKSGSQYWNSITDLFF*SALWKA Trigger: AGCCTTCCACAGAGCACTGCAGAAGAAGAGATCTGT...GATTGAATTCCAATATTGAGAGCCACTTTTATTTACAGACTGGGAGAGACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR CCA 90 bp | CACCCCTGCAATAAATCTCACTTGGTTATAGTATTTGATGCTTCCTGTTTTCAGCCATATAAACCAACATaGCTATACCAAAGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPCNKSHLVIVFDASCFQPYKPT*LYQRRA Trigger: GGCTCTTCTTTGGTATAGCCATGTTGGTTTATATGG...CTGAAAACAGGAAGCATCAAATACTATAACCAAGTGAGATTTATTGCAGGGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 72 bp | TGGTGTTTCCATGTAACCCTTTACAGATTAAAGAATTaGCCTTGTGTTCTGAGCTTGTTGAATGTGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WCFHVTLYRLKN*PCVLSLLNVCF Trigger: GAAACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGTTACATGGAAACACCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 72 bp | TTTATTTATTTAACATTTCGCAGTACATTGATTGCGTaGCATATGTGCAAACTACTGCACCCCTGCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FIYLTFRSTLIA*HMCKLLHPCNK Trigger: TTTATTGCAGGGGTGCAGTAGTTTGCACATATGCAACGCAATCAATGTACTGCGAAATGTTAAATAAATAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 72 bp | TATTTTTCCTTTATTTATTTAACATTTCGCAGTACATaGATTGCGTTGCATATGTGCAAACTACTGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: YFSFIYLTFRST*IALHMCKLLHP Trigger: GGGGTGCAGTAGTTTGCACATATGCAACGCAATCAATGTACTGCGAAATGTTAAATAAATAAAGGAAAAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| 3UTR CAA 72 bp | TTTCCATGTAACCCTTTACAGATTAAAGAATTTGCCTaGTGTTCTGAGCTTGTTGAATGTGTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: FPCNPLQIKEFA*CSELVECVFLM Trigger: CATAAGAAACACACATTCAACAAGCTCAGAACACAAGGCAAATTCTTTAATCTGTAAAGGGTTACATGGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR CAA 90 bp | CTGCTGAAACAGGGTCCCTTATTGAAACAGAAGTTTCACTGTCAGCCATCAAACATAGGGGTGTGCAGCTaGGGGTCCAGGCAGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: LLKQGPLLKQKFHCQPSNIGVCS*GSRQMT Trigger: AGTCATCTGCCTGGACCCCAAGCTGCACACCCCTAT...GTTTGATGGCTGACAGTGAAACTTCTGTTTCAATAAGGGACCCTGTTTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR CAA 90 bp | GTGAGTATTAGGGACCCTATTTTAACACTCTCTGCTGAAACAGGGTCCCTTATTTCCTGCGACCCTCCTTaGACTGCATTTTCAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: VSIRDPILTLSAETGSLISCDPP*TAFSGL Trigger: CAATCCTGAAAATGCAGTCAAAGGAGGGTCGCAGGA...AATAAGGGACCCTGTTTCAGCAGAGAGTGTTAAAATAGGGTCCCTAATACTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAAACAAGAATTCCAACAAGGCACAGTAGAACAAGTCTCAAACTCCAGGACCTTAGCAGGAGAATaGTGTGTGCCACAGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ILKQEFQQGTVEQVSNSRTLAGE*CVPQRG Trigger: GCCTCTCTGTGGCACACACAATTCTCCTGCTAAGGT...CCTGGAGTTTGAGACTTGTTCTACTGTGCCTTGTTGGAATTCTTGTTTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS-3UTR CAA 90 bp | ATTTTAAAACAAGAATTCCAACAAGGCACAGTAGAACAAGTCTCAAACTCCAGGACTGCATTTTCAGGATaGTCCAGAGGATGTGCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKQEFQQGTVEQVSNSRTAFSG*SRGCAC Trigger: ACACGCACATCCTCTGGACAATCCTGAAAATGCAGT...CCTGGAGTTTGAGACTTGTTCTACTGTGCCTTGTTGGAATTCTTGTTTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205175.3 |
||
| CDS TCA 72 bp | GAGAATTGTGTGTGCCACAGAGAGGCTAAATCCACATaGCCAAGATGTGACAGCCAGGGCCACACATACTTT | + |
|
Preference number: 6 (lower is better) Translates to: ENCVCHREAKST*PRCDSQGHTYF Trigger: AAAGTATGTGTGGCCCTGGCTGTCACATCTTGGTCATGTGGATTTAGCCTCTCTGTGGCACACACAATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060243.5 ENSMUST00000205175.3 |
||
| CDS CAA 72 bp | GGATTGTCCAGAGGATGTGCGTGTAAGATACAAGCATaGAGCAAAGGGGTCCAACTAAGACGAAAACACATG | + |
|
Preference number: 6 (lower is better) Translates to: GLSRGCACKIQA*SKGVQLRRKHM Trigger: CATGTGTTTTCGTCTTAGTTGGACCCCTTTGCTCAATGCTTGTATCTTACACGCACATCCTCTGGACAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060243.5 ENSMUST00000205175.3 |
||