Pregenerated sensors for OLFR435 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048693Ensembl transcript IDs: ENSMUST00000058118.4, ENSMUST00000215565.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTaGTTTAAGTGGACGGTGACCCTCATAGGTAGGTCCATGGCATCT | + |
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Preference number: 1 (lower is better) Translates to: RYWPLPVKVTVRDES*FKWTVTLIGRSMAS Trigger: AGATGCCATGGACCTACCTATGAGGGTCACCGTCCACTTAAAGCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR TCA 90 bp | GGGAGAGAAATAAATCATATGAAGCTCCTTGAGATTTCTGGGGATTaGCTTCTAGTCTTCAGGCATTGCTTAACTAGGTCAAATCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: GREINHMKLLEISGD*LLVFRHCLTRSNQQ Trigger: TTGCTGATTTGACCTAGTTAAGCAATGCCTGAAGACTAGAAGTCAATCCCCAGAAATCTCAAGGAGCTTCATATGATTTATTTCTCTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR-3UTR CCA 90 bp | AGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCTTTAAGCTCTTTCAGTATCTGTaGGTTTTGCAAAAGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: RYWPLPVKVTVRDESCFKLFQYL*VLQKLL Trigger: CAGCAGCTTTTGCAAAACCCACAGATACTGAAAGAG...CTTAAAGCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR-3UTR GCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGAGTCAGAGATGAGAGCTaGTTTAAGTGGACGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: IMMTLGKTLNMKVHSISRVRDES*FKWTVT Trigger: GGTCACCGTCCACTTAAAGCAGCTCTCATCTCTGAC...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR-3UTR CCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGAGGAAAGTTCTATATGTaGCTGTGGGAGTCAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: IMMTLGKTLNMKVHSISRGKFYM*LWESVD Trigger: ATCCACTGACTCCCACAGCCACATATAGAACTTTCC...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR-3UTR TCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGATCATATGAAGCTCCTTaGGATTTCTGGGGATTGACT | + |
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Preference number: 2 (lower is better) Translates to: IMMTLGKTLNMKVHSISRSYEAP*DFWGLT Trigger: AGTCAATCCCCAGAAATCTCAAGGAGCTTCATATGA...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR-3UTR GCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGAAGTATCTGTGGGTTTTaGAAAAGCTGCTGCATTATT | + |
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Preference number: 2 (lower is better) Translates to: IMMTLGKTLNMKVHSISRSICGF*KSCCII Trigger: AATAATGCAGCAGCTTTTGCAAAACCCACAGATACT...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR CCA 72 bp | TCAACCTACTACCAGGCTGAAAAGCCAGTTAGATACTaGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: STYYQAEKPVRY*PLPVKVTVRDE Trigger: CTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCTAACTGGCTTTTCAGCCTGGTAGTAGGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| 3UTR TCA 72 bp | ATAAATCATATGAAGCTCCTTGAGATTTCTGGGGATTaGCTTCTAGTCTTCAGGCATTGCTTAACTAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: INHMKLLEISGD*LLVFRHCLTRS Trigger: TGACCTAGTTAAGCAATGCCTGAAGACTAGAAGTCAATCCCCAGAAATCTCAAGGAGCTTCATATGATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR CCA 90 bp | CCAGTTAGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCATCCAGCAAAGGAGATaGGCTTGGTCTCATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVRYWPLPVKVTVRDESCIQQRR*AWSHPR Trigger: TCTTGGATGAGACCAAGCCCATCTCCTTTGCTGGAT...GCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCTAACTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR CCA 90 bp | CCAGTTAGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCAGGCAATGTCAACAGTaGCCAAATTGGAGAGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PVRYWPLPVKVTVRDESCRQCQQ*PNWRGR Trigger: TCTTCCTCTCCAATTTGGCCACTGTTGACATTGCCT...GCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCTAACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR TCA 90 bp | CCAGTTAGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCGCAAAAAGAATTACATaGATTCTTGGGCCAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: PVRYWPLPVKVTVRDESCAKRIT*ILGPRQ Trigger: CTGTCTTGGCCCAAGAATTCATGTAATTCTTTTTGC...GCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCTAACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR CCA 90 bp | CCAGTTAGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCAATTACATGAATTCTTaGGCCAAGACAGAATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PVRYWPLPVKVTVRDESCNYMNS*AKTESQ Trigger: CTGGGATTCTGTCTTGGCCCAAGAATTCATGTAATT...GCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCTAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR GCA 90 bp | AGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCTTTAAGGGCAAACACACAGGCTaGAAAGATAACAACTTGATT | + |
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Preference number: 4 (lower is better) Translates to: RYWPLPVKVTVRDESCFKGKHTG*KDNNLI Trigger: AATCAAGTTGTTATCTTTGCAGCCTGTGTGTTTGCC...CTTAAAGCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR GCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGAAGGAAAAGGATCTTCTaGAGCTCTTCAGGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: IMMTLGKTLNMKVHSISRRKRIF*SSSGCW Trigger: CCAGCACCCTGAAGAGCTGCAGAAGATCCTTTTCCT...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR CCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGAAGGATGAGGACCAAATaGACCAGAGCAAGGAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: IMMTLGKTLNMKVHSISRRMRTK*TRARRK Trigger: CTTTCTCCTTGCTCTGGTCCATTTGGTCCTCATCCT...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR GCA 90 bp | ATCATGATGACATTAGGCAAAACTCTGAACATGAAAGTCCATTCCATTTCAAGAGGAGGACACATTCTGTaGTCCCAAATGTCAAAAATA | + |
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Preference number: 4 (lower is better) Translates to: IMMTLGKTLNMKVHSISRGGHIL*SQMSKI Trigger: TATTTTTGACATTTGGGAGCACAGAATGTGTCCTCC...TCTTGAAATGGAATGGACTTTCATGTTCAGAGTTTTGCCTAATGTCATCATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS-3UTR CAA 90 bp | AGATACTGGCCTCTTCCTGTAAAGGTTACTGTCAGAGATGAGAGCTGCTTTAAGTGGGAATGGTTTTCATaGCACAGTGACCTCCTAAGG | + |
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Preference number: 5 (lower is better) Translates to: RYWPLPVKVTVRDESCFKWEWFS*HSDLLR Trigger: CCTTAGGAGGTCACTGTGCAATGAAAACCATTCCCA...CTTAAAGCAGCTCTCATCTCTGACAGTAACCTTTACAGGAAGAGGCCAGTATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215565.3 |
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| CDS CCA 72 bp | GACAGAGAACAATGCAAAAAGAATTACATGAATTCTTaGGCCAAGACAGAATCCCAGCAGGATGAACTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DREQCKKNYMNS*AKTESQQDELC Trigger: ACAGAGTTCATCCTGCTGGGATTCTGTCTTGGCCCAAGAATTCATGTAATTCTTTTTGCATTGTTCTCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058118.4 ENSMUST00000215565.3 |
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