Pregenerated sensors for OLFR433 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045381Ensembl transcript IDs: ENSMUST00000052975.6, ENSMUST00000214690.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTaGCCTTTTCATTTCAAGGCTGCAATGACTGTTTACCTTATCGCC | + |
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Preference number: 1 (lower is better) Translates to: CWDHVLRSDVAASFR*PFHFKAAMTVYLIA Trigger: GGCGATAAGGTAAACAGTCATTGCAGCCTTGAAATGAAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| 3UTR CCA 90 bp | TGGAAGATGATTCAAGATTACAAGTCTCTATCAGCTGGGAGCTGTTaGCTCTACATGAAACTCCACACATGCTGTCAATGGGTACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: WKMIQDYKSLSAGSC*LYMKLHTCCQWVLS Trigger: AGAAAGTACCCATTGACAGCATGTGTGGAGTTTCATGTAGAGCCAACAGCTCCCAGCTGATAGAGACTTGTAATCTTGAATCATCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR GCA 90 bp | CATAAGAATGAGAAAAGTAACATATTTCTCCCAGTTCCTAGACTCTaGCAAGGTTTTAATTCTGTCATTCCAAGTACCAGACAATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HKNEKSNIFLPVPRL*QGFNSVIPSTRQSL Trigger: CAGAGATTGTCTGGTACTTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGTTACTTTTCTCATTCTTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR TCA 90 bp | AAACTCAGTGGTACACTTATTGGCATTTATTTTGATTCTGCAAAATaGTTCACAAGCCATTTGAGTGTTGCATTTACCCTGAATGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: KLSGTLIGIYFDSAK*FTSHLSVAFTLNVG Trigger: ACCCACATTCAGGGTAAATGCAACACTCAAATGGCTTGTGAATCATTTTGCAGAATCAAAATAAATGCCAATAAGTGTACCACTGAGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGTCTGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGAAGCCATTTGAGTGTTaGATTTACCCTGAATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TVCWDHVLRSDVAASFRWKPFEC*IYPECG Trigger: CCCACATTCAGGGTAAATGCAACACTCAAATGGCTT...CCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| 3UTR-3UTR CCA 90 bp | AATTCTGTCATTCCAAGTACCAGACAATCTCTGAGTGTGTATCTGGTGATTCAGCACTGCAGATTTGTGTaGCATTTCCCTTCCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NSVIPSTRQSLSVYLVIQHCRFV*HFPSLW Trigger: CCAGAGGGAAGGGAAATGCCACACAAATCTGCAGTG...CTGAATCACCAGATACACACTCAGAGATTGTCTGGTACTTGGAATGACAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR CCA 90 bp | ACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAGCTGCTAGCTTTCGGTaGCCTTTTCATTTCAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: TYFSQFLDSAKVLILSFQAASFR*PFHFKA Trigger: AGCCTTGAAATGAAAAGGCCACCGAAAGCTAGCAGC...TTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR CCA 90 bp | AATGAGAAAAGTAACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATGCACTGAGCAGACAATaGGGCCTGACACTGCAGATT | + |
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Preference number: 2 (lower is better) Translates to: NEKSNIFLPVPRLCQGFNALSRQ*GLTLQI Trigger: AATCTGCAGTGTCAGGCCCCATTGTCTGCTCAGTGC...ATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGTTACTTTTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAGTACCAATGATGTATAAATTGTaGGCCATCAGATACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: FSQFLDSAKVLILSFQVPMMYKL*AIRYPH Trigger: GTGTGGGTATCTGATGGCTCACAATTTATACATCAT...TGGTACTTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTAAGTTTACGGTCAGCCAGTTGTATGCAGCATATTTCAAATGAAGTTCGGGTTGGGATCATGTGTTaGGGTCAGATGTTGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: ILSLRSASCMQHISNEVRVGIMC*GQMLLL Trigger: TAGCAGCAACATCTGACCTCAACACATGATCCCAAC...CCGAACTTCATTTGAAATATGCTGCATACAACTGGCTGACCGTAAACTTAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTCGGATACAGCCTCTATTAAATTCATACACTATAACCACACAGCACACCACAAGCCATTTGAGTGTTaGATTTACCCTGAATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SSDTASIKFIHYNHTAHHKPFEC*IYPECG Trigger: CCCACATTCAGGGTAAATGCAACACTCAAATGGCTT...GTGGTGTGCTGTGTGGTTATAGTGTATGAATTTAATAGAGGCTGTATCCGAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAGTACCATTCAGAACTGGTTTCTaGAAGATGATTCAAGATTAC | + |
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Preference number: 2 (lower is better) Translates to: FSQFLDSAKVLILSFQVPFRTGF*KMIQDY Trigger: GTAATCTTGAATCATCTTCCAGAAACCAGTTCTGAA...TGGTACTTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR GCA 72 bp | GCTGGGAGCTGTTGGCTCTACATGAAACTCCACACATaGTGTCAATGGGTACTTTCTGTCACCCATGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: AGSCWLYMKLHT*CQWVLSVTHVF Trigger: AAAAACATGGGTGACAGAAAGTACCCATTGACAGCATGTGTGGAGTTTCATGTAGAGCCAACAGCTCCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR TCA 72 bp | TACCTTATCGCCCACACTTTTATGATGTATAAATTGTaGGCCATCAGATACCCACACGGGGGTGGTCTGATG | + |
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Preference number: 3 (lower is better) Translates to: YLIAHTFMMYKL*AIRYPHGGGLM Trigger: CATCAGACCACCCCCGTGTGGGTATCTGATGGCTCACAATTTATACATCATAAAAGTGTGGGCGATAAGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| 3UTR CCA 72 bp | CATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTaGCCTTTTCATTTCAAGGCTGCAATGACTGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: HVLRSDVAASFR*PFHFKAAMTVY Trigger: GTAAACAGTCATTGCAGCCTTGAAATGAAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| 3UTR-3UTR CAA 90 bp | AATTCTGTCATTCCAAGTACCAGACAATCTCTGAGTGTGTATCTGGTGATTCAGATCAGCTGGGAGCTGTaGGCTCTACATGAAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: NSVIPSTRQSLSVYLVIQISWEL*ALHETP Trigger: TGGAGTTTCATGTAGAGCCAACAGCTCCCAGCTGAT...CTGAATCACCAGATACACACTCAGAGATTGTCTGGTACTTGGAATGACAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR CCA 72 bp | ATTCAAGATTACAAGTCTCTATCAGCTGGGAGCTGTTaGCTCTACATGAAACTCCACACATGCTGTCAATGG | + |
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Preference number: 3 (lower is better) Translates to: IQDYKSLSAGSC*LYMKLHTCCQW Trigger: CCATTGACAGCATGTGTGGAGTTTCATGTAGAGCCAACAGCTCCCAGCTGATAGAGACTTGTAATCTTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR TCA 72 bp | TTTTTGTCTTTTAAACTGTCTGTTGGGATCATGTGTTaGGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: FLSFKLSVGIMC*GQMLLLAFGGL Trigger: AAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGTTTAAAAGACAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR-3UTR CAA 90 bp | AATGAGAAAAGTAACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATCCTGACACTGCAGATTaGTGTGGCATTTCCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: NEKSNIFLPVPRLCQGFNPDTAD*CGISLP Trigger: GGGAAGGGAAATGCCACACAAATCTGCAGTGTCAGG...ATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGTTACTTTTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR GCA 72 bp | CTACCTCTGATTGATCTGTCTAAAAGACTGAACATATaGAGCATAGTAAGTGCTAAACTCAGTGGTACACTT | + |
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Preference number: 3 (lower is better) Translates to: LPLIDLSKRLNI*SIVSAKLSGTL Trigger: AAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAGTCTTTTAGACAGATCAATCAGAGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| 3UTR GCA 72 bp | GAGAAAAGTAACATATTTCTCCCAGTTCCTAGACTCTaGCAAGGTTTTAATTCTGTCATTCCAAGTACCAGA | + |
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Preference number: 3 (lower is better) Translates to: EKSNIFLPVPRL*QGFNSVIPSTR Trigger: TCTGGTACTTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGTTACTTTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| 3UTR TCA 72 bp | TTTACGGTCAGCCAGTTGTATGCAGCATATTTCAAATaGAGTTCGGATACAGCCTCTATTAAATTCATACAC | + |
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Preference number: 3 (lower is better) Translates to: FTVSQLYAAYFK*SSDTASIKFIH Trigger: GTGTATGAATTTAATAGAGGCTGTATCCGAACTTCATTTGAAATATGCTGCATACAACTGGCTGACCGTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCTGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCATGGAGCAGGGTGTaGAGCAAGGTGGGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: TVCWDHVLRSDVAASFRWPWSRV*SKVGTV Trigger: CACAGTGCCCACCTTGCTGCACACCCTGCTCCATGG...CCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ACTGTCTGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGAGGCACCAGGGCAGCTaGAAAGCCAGCTACCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TVCWDHVLRSDVAASFRWRHQGS*KASYPS Trigger: ACTTGGGTAGCTGGCTTTTCAGCTGCCCTGGTGCCT...CCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTTTTCCATGGAGCAGGGTGTaGAGCAAGGTGGGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: CWDHVLRSDVAASFRWPFPWSRV*SKVGTV Trigger: CACAGTGCCCACCTTGCTGCACACCCTGCTCCATGG...AAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTTTTGAGGGGATGGGTGAATaGCCATGGAGCAGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: CWDHVLRSDVAASFRWPFEGMGE*PWSRVC Trigger: GCACACCCTGCTCCATGGGCATTCACCCATCCCCTC...AAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ACTGTCTGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGTGGGCACTGTGGTGCTaGCATACCAGAGTTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TVCWDHVLRSDVAASFRWWALWC*HTRVPG Trigger: TCCTGGAACTCTGGTATGTCAGCACCACAGTGCCCA...CCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCTGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCTGCCTGCTCATGAGTaGATGGTAGTGCAGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: TVCWDHVLRSDVAASFRWLPAHE*MVVQWT Trigger: CGTCCACTGCACTACCATGCACTCATGAGCAGGCAG...CCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTTTTAGTTCCCTGCCAGTGTaGGGAGATAGATGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: CWDHVLRSDVAASFRWPFSSLPV*GDRCTG Trigger: CCCTGTGCATCTATCTCCTCACACTGGCAGGGAACT...AAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTTTTGAGCATGCCACCTTGTaGTCACACATGCCAACCGCA | + |
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Preference number: 4 (lower is better) Translates to: CWDHVLRSDVAASFRWPFEHATL*SHMPTA Trigger: TGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTC...AAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | AATTCTGTCATTCCAAGTACCAGACAATCTCTGAGTGTGTATCTGGTGATTCAGGGCTCGACTGGCAGCTaGAGGCAGCTTCAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: NSVIPSTRQSLSVYLVIQGSTGS*RQLQDS Trigger: GCTGTCCTGAAGCTGCCTTCAGCTGCCAGTCGAGCC...CTGAATCACCAGATACACACTCAGAGATTGTCTGGTACTTGGAATGACAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | ACTGTCTGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGGGTAGCACTCGGTCATaGCCAAGGAGTGAAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: TVCWDHVLRSDVAASFRWGSTRS*PRSERH Trigger: ATGTCTTTCACTCCTTGGGCATGACCGAGTGCTACC...CCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACAGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACGAGGGGATGGGTGAATaGCCATGGAGCAGGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNEGMGE*PWSRVC Trigger: GCACACCCTGCTCCATGGGCATTCACCCATCCCCTC...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTTTTAGCCCTGAATCTGCCTaGACCAAGACAATGATGAAC | + |
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Preference number: 4 (lower is better) Translates to: CWDHVLRSDVAASFRWPFSPESA*TKTMMN Trigger: GTTCATCATTGTCTTGGTTCAGGCAGATTCAGGGCT...AAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACGGGAGTGGACAGCCCTaGATCTGCCTGAACCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNGSGQP*ICLNQD Trigger: GTCTTGGTTCAGGCAGATTCAGGGCTGTCCACTCCC...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGGTTTCTGGAAGATGATTCAAGATTACAAGTCTCTATCAGCTGGGAGCTGGGCACTGTGGTGCTaGCATACCAGAGTTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RTGFWKMIQDYKSLSAGSWALWC*HTRVPG Trigger: TCCTGGAACTCTGGTATGTCAGCACCACAGTGCCCA...GCTCCCAGCTGATAGAGACTTGTAATCTTGAATCATCTTCCAGAAACCAGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACACGGTAAACTGGCAGTaGGACATGCAGGCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNTVNWQ*DMQAPG Trigger: CCCTGGTGCCTGCATGTCTCACTGCCAGTTTACCGT...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACAGTTCCCTGCCAGTGTaGGGAGATAGATGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNSSLPV*GDRCTG Trigger: CCCTGTGCATCTATCTCCTCACACTGGCAGGGAACT...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAAGGCACCAGGGCAGCTaGAAAGCCAGCTACCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TYFSQFLDSAKVLILSFQRHQGS*KASYPS Trigger: ACTTGGGTAGCTGGCTTTTCAGCTGCCCTGGTGCCT...TTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTTATTTTGATGGCTCGACTGGCAGCTaGAGGCAGCTTCAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: CSIVSAKLSGTLIGIYFDGSTGS*RQLQDS Trigger: GCTGTCCTGAAGCTGCCTTCAGCTGCCAGTCGAGCC...ATCAAAATAAATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | AATTCTGTCATTCCAAGTACCAGACAATCTCTGAGTGTGTATCTGGTGATTCAGGAGCATGCCACCTTGTaGTCACACATGCCAACCGCA | + |
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Preference number: 4 (lower is better) Translates to: NSVIPSTRQSLSVYLVIQEHATL*SHMPTA Trigger: TGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTC...CTGAATCACCAGATACACACTCAGAGATTGTCTGGTACTTGGAATGACAGAATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACATGGGTGAATGCCCATaGAGCAGGGTGTGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNMGECP*SRVCSK Trigger: CTTGCTGCACACCCTGCTCCATGGGCATTCACCCAT...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACAGCCAGCTACCCAAGTaGCACCTGCAAGCCATAGCT | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNSQLPK*HLQAIA Trigger: AGCTATGGCTTGCAGGTGCCACTTGGGTAGCTGGCT...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | AATTCTGTCATTCCAAGTACCAGACAATCTCTGAGTGTGTATCTGGTGATTCAGAGGCTTTGGCTCGACTaGCAGCTGAAGGCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NSVIPSTRQSLSVYLVIQRLWLD*QLKAAS Trigger: TGAAGCTGCCTTCAGCTGCCAGTCGAGCCAAAGCCT...CTGAATCACCAGATACACACTCAGAGATTGTCTGGTACTTGGAATGACAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | TTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAGTACCAATGTGGAGAAGGCTTTaGCTCGACTGGCAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSQFLDSAKVLILSFQVPMWRRL*LDWQLK Trigger: CTTCAGCTGCCAGTCGAGCCAAAGCCTTCTCCACAT...TGGTACTTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | AGTTCGGATACAGCCTCTATTAAATTCATACACTATAACCACACAGCACACCACAGCCATAGCTGTACCTaGCTGCTCATGAGTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: SSDTASIKFIHYNHTAHHSHSCT*LLMSAW Trigger: CCATGCACTCATGAGCAGGCAGGTACAGCTATGGCT...GTGGTGTGCTGTGTGGTTATAGTGTATGAATTTAATAGAGGCTGTATCCGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | CTGAACATATGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTAGGCTTTGGCTCGACTaGCAGCTGAAGGCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LNICSIVSAKLSGTLIGIRLWLD*QLKAAS Trigger: TGAAGCTGCCTTCAGCTGCCAGTCGAGCCAAAGCCT...AATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACATGTGGAGAAGGCTTTaGCTCGACTGGCAGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNMWRRL*LDWQLK Trigger: CTTCAGCTGCCAGTCGAGCCAAAGCCTTCTCCACAT...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | CTGAACATATGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTGTCATGCCCAAGGAGTaGAAGACATACAGCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: LNICSIVSAKLSGTLIGIVMPKE*KTYSWT Trigger: CGTCCAGCTGTATGTCTTTCACTCCTTGGGCATGAC...AATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAGTCATGCCCAAGGAGTaGAAGACATACAGCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: TYFSQFLDSAKVLILSFQVMPKE*KTYSWT Trigger: CGTCCAGCTGTATGTCTTTCACTCCTTGGGCATGAC...TTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTTATTTTGATACGGTAAACTGGCAGTaGGACATGCAGGCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CSIVSAKLSGTLIGIYFDTVNWQ*DMQAPG Trigger: CCCTGGTGCCTGCATGTCTCACTGCCAGTTTACCGT...ATCAAAATAAATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR GCA 90 bp | CTGAACATATGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTAGCCATAGCTGTACCTaGCTGCTCATGAGTGCATGG | + |
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Preference number: 4 (lower is better) Translates to: LNICSIVSAKLSGTLIGISHSCT*LLMSAW Trigger: CCATGCACTCATGAGCAGGCAGGTACAGCTATGGCT...AATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACAGAAGTACATGGGAGTaGACAGCCCTGAATCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNRSTWE*TALNLP Trigger: AGGCAGATTCAGGGCTGTCCACTCCCATGTACTTCT...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | ATGCCTTTTGCTCATTCTGCTCTACCTCTGATTGATCTGTCTAAAAGACTGAACCAAAATTGCATCCAGTaGCCACACCAATCACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: MPFAHSALPLIDLSKRLNQNCIQ*PHQSLP Trigger: GGGCAGTGATTGGTGTGGCCACTGGATGCAATTTTG...GTTCAGTCTTTTAGACAGATCAATCAGAGGTAGAGCAGAATGAGCAAAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | AGTTCGGATACAGCCTCTATTAAATTCATACACTATAACCACACAGCACACCACCAAAATTGCATCCAGTaGCCACACCAATCACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSDTASIKFIHYNHTAHHQNCIQ*PHQSLP Trigger: GGGCAGTGATTGGTGTGGCCACTGGATGCAATTTTG...GTGGTGTGCTGTGTGGTTATAGTGTATGAATTTAATAGAGGCTGTATCCGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | AGTTCGGATACAGCCTCTATTAAATTCATACACTATAACCACACAGCACACCACGCAACCACTGTCATATaGGAGGAGCATGTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSDTASIKFIHYNHTAHHATTVI*EEHVEK Trigger: CTTCTCCACATGCTCCTCCCATATGACAGTGGTTGC...GTGGTGTGCTGTGTGGTTATAGTGTATGAATTTAATAGAGGCTGTATCCGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | AGTTCGGATACAGCCTCTATTAAATTCATACACTATAACCACACAGCACACCACAGCCCTGAATCTGCCTaGACCAAGACAATGATGAAC | + |
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Preference number: 4 (lower is better) Translates to: SSDTASIKFIHYNHTAHHSPESA*TKTMMN Trigger: GTTCATCATTGTCTTGGTTCAGGCAGATTCAGGGCT...GTGGTGTGCTGTGTGGTTATAGTGTATGAATTTAATAGAGGCTGTATCCGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | AGAACTGGTTTCTGGAAGATGATTCAAGATTACAAGTCTCTATCAGCTGGGAGCCATAGAGTCCCAAGATaGGGACAAAATTGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: RTGFWKMIQDYKSLSAGSHRVPR*GQNCIQ Trigger: CTGGATGCAATTTTGTCCTCATCTTGGGACTCTATG...GCTCCCAGCTGATAGAGACTTGTAATCTTGAATCATCTTCCAGAAACCAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTTATTTTGATATGGGTGAATGCCCATaGAGCAGGGTGTGCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: CSIVSAKLSGTLIGIYFDMGECP*SRVCSK Trigger: CTTGCTGCACACCCTGCTCCATGGGCATTCACCCAT...ATCAAAATAAATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | CTGAACATATGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTGCAACCACTGTCATATaGGAGGAGCATGTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LNICSIVSAKLSGTLIGIATTVI*EEHVEK Trigger: CTTCTCCACATGCTCCTCCCATATGACAGTGGTTGC...AATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | CTGAACATATGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTAGGTCTGCTCTGAGGTaGACCCACATACACAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LNICSIVSAKLSGTLIGIRSALR*THIHSK Trigger: TTTACTGTGTATGTGGGTTCACCTCAGAGCAGACCT...AATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | ACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATTCTGTCATTCCAAAGGTCTGCTCTGAGGTaGACCCACATACACAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: TYFSQFLDSAKVLILSFQRSALR*THIHSK Trigger: TTTACTGTGTATGTGGGTTCACCTCAGAGCAGACCT...TTGGAATGACAGAATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CCA 90 bp | AATGAGAAAAGTAACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATAGAAGTACATGGGAGTaGACAGCCCTGAATCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: NEKSNIFLPVPRLCQGFNRSTWE*TALNLP Trigger: AGGCAGATTCAGGGCTGTCCACTCCCATGTACTTCT...ATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGTTACTTTTCTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTTATTTTGATCATAGAGTCCCAAGATaGGGACAAAATTGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: CSIVSAKLSGTLIGIYFDHRVPR*GQNCIQ Trigger: CTGGATGCAATTTTGTCCTCATCTTGGGACTCTATG...ATCAAAATAAATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS GCA 90 bp | AAGCATGCAGACGAGGGGATGGGTGAATGCCCATGGAGCAGGGTGTaGAGCAAGGTGGGCACTGTGGTGCTGACATACCAGAGTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KHADEGMGECPWSRV*SKVGTVVLTYQSSR Trigger: CCTGGAACTCTGGTATGTCAGCACCACAGTGCCCACCTTGCTGCACACCCTGCTCCATGGGCATTCACCCATCCCCTCGTCTGCATGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS GCA 90 bp | TGGCCACACCAATCACTGCCCCGTGAACCCGAGCATGCCACCTTGTaGTCACACATGCCAACCGCATTAGTGGTGCCAGGTCACAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: WPHQSLPREPEHATL*SHMPTALVVPGHKS Trigger: ACTTTTGTGACCTGGCACCACTAATGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTGTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS TCA 90 bp | ATGAGGACAAAATTGCATCCAGTGGCCACACCAATCACTGCCCCGTaGACCCGAGCATGCCACCTTGTGCTCACACATGCCAACCGCATT | + |
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Preference number: 5 (lower is better) Translates to: MRTKLHPVATPITAP*TRACHLVLTHANRI Trigger: AATGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTGTGGCCACTGGATGCAATTTTGTCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS GCA 90 bp | TCCCAAGATGAGGACAAAATTGCATCCAGTGGCCACACCAATCACTaGCCCGTGAACCCGAGCATGCCACCTTGTGCTCACACATGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SQDEDKIASSGHTNH*PVNPSMPPCAHTCQ Trigger: TTGGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTGTGGCCACTGGATGCAATTTTGTCCTCATCTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CAA 90 bp | TGTTGGGATCATGTGTTGAGGTCAGATGTTGCTGCTAGCTTTCGGTGGCCTTTTCCCGAGCATGCCACCTaGTGCTCACACATGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: CWDHVLRSDVAASFRWPFPEHAT*CSHMPT Trigger: GGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGG...AAAAGGCCACCGAAAGCTAGCAGCAACATCTGACCTCAACACATGATCCCAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS TCA 90 bp | AAAAGTAATGGGCTATTTCTTTCAAGCAATACGGTAAACTGGCAGTaGGACATGCAGGCACCAGGGCAGCTGAAAAGCCAGCTACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: KSNGLFLSSNTVNWQ*DMQAPGQLKSQLPK Trigger: CTTGGGTAGCTGGCTTTTCAGCTGCCCTGGTGCCTGCATGTCTCACTGCCAGTTTACCGTATTGCTTGAAAGAAATAGCCCATTACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CAA 90 bp | AATGAGAAAAGTAACATATTTCTCCCAGTTCCTAGACTCTGCCAAGGTTTTAATCCCGAGCATGCCACCTaGTGCTCACACATGCCAACC | + |
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Preference number: 5 (lower is better) Translates to: NEKSNIFLPVPRLCQGFNPEHAT*CSHMPT Trigger: GGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGG...ATTAAAACCTTGGCAGAGTCTAGGAACTGGGAGAAATATGTTACTTTTCTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CAA 90 bp | CTGAACATATGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTCATGTGGAGAAGGCTTaGGCTCGACTGGCAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LNICSIVSAKLSGTLIGIHVEKA*ARLAAE Trigger: TTCAGCTGCCAGTCGAGCCAAAGCCTTCTCCACATG...AATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCATATGTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS-3UTR CAA 90 bp | AATTCTGTCATTCCAAGTACCAGACAATCTCTGAGTGTGTATCTGGTGATTCAGAAGATGAGGACAAAATaGCATCCAGTGGCCACACCA | + |
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Preference number: 5 (lower is better) Translates to: NSVIPSTRQSLSVYLVIQKMRTK*HPVATP Trigger: TGGTGTGGCCACTGGATGCAATTTTGTCCTCATCTT...CTGAATCACCAGATACACACTCAGAGATTGTCTGGTACTTGGAATGACAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214690.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCATAGTAAGTGCTAAACTCAGTGGTACACTTATTGGCATTTATTTTGATAAGATGAGGACAAAATaGCATCCAGTGGCCACACCA | + |
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Preference number: 5 (lower is better) Translates to: CSIVSAKLSGTLIGIYFDKMRTK*HPVATP Trigger: TGGTGTGGCCACTGGATGCAATTTTGTCCTCATCTT...ATCAAAATAAATGCCAATAAGTGTACCACTGAGTTTAGCACTTACTATGCTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS CCA 72 bp | CAGGCACCAGGGCAGCTGAAAAGCCAGCTACCCAAGTaGCACCTGCAAGCCATAGCTGTACCTGCCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: QAPGQLKSQLPK*HLQAIAVPACS Trigger: TGAGCAGGCAGGTACAGCTATGGCTTGCAGGTGCCACTTGGGTAGCTGGCTTTTCAGCTGCCCTGGTGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS CAA 90 bp | CAGTGGCCACACCAATCACTGCCCCGTGAACCCGAGCATGCCACCTaGTGCTCACACATGCCAACCGCATTAGTGGTGCCAGGTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: QWPHQSLPREPEHAT*CSHMPTALVVPGHK Trigger: TTTGTGACCTGGCACCACTAATGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTGTGGCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS GCA 72 bp | CAATCACTGCCCCGTGAACCCGAGCATGCCACCTTGTaGTCACACATGCCAACCGCATTAGTGGTGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QSLPREPEHATL*SHMPTALVVPG Trigger: ACCTGGCACCACTAATGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS CAA 72 bp | CACCAATCACTGCCCCGTGAACCCGAGCATGCCACCTaGTGCTCACACATGCCAACCGCATTAGTGGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: HQSLPREPEHAT*CSHMPTALVVP Trigger: TGGCACCACTAATGCGGTTGGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS TCA 72 bp | AAATTGCATCCAGTGGCCACACCAATCACTGCCCCGTaGACCCGAGCATGCCACCTTGTGCTCACACATGCC | + |
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Preference number: 6 (lower is better) Translates to: KLHPVATPITAP*TRACHLVLTHA Trigger: GGCATGTGTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTGTGGCCACTGGATGCAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS GCA 72 bp | GAGGACAAAATTGCATCCAGTGGCCACACCAATCACTaGCCCGTGAACCCGAGCATGCCACCTTGTGCTCAC | + |
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Preference number: 6 (lower is better) Translates to: EDKIASSGHTNH*PVNPSMPPCAH Trigger: GTGAGCACAAGGTGGCATGCTCGGGTTCACGGGGCAGTGATTGGTGTGGCCACTGGATGCAATTTTGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS TCA 72 bp | GGACAGCTGTCAGAATACCCCCATAGAGTCCCAAGATaGGGACAAAATTGCATCCAGTGGCCACACCAATCA | + |
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Preference number: 6 (lower is better) Translates to: GQLSEYPHRVPR*GQNCIQWPHQS Trigger: TGATTGGTGTGGCCACTGGATGCAATTTTGTCCTCATCTTGGGACTCTATGGGGGTATTCTGACAGCTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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| CDS TCA 72 bp | AAGGCAATAAGTTTGTCAGTGCCCTCAGGTCTGCTCTaGGGTGAACCCACATACACAGTAAAAGCAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: KAISLSVPSGLL*GEPTYTVKAEA Trigger: TGCTTCTGCTTTTACTGTGTATGTGGGTTCACCTCAGAGCAGACCTGAGGGCACTGACAAACTTATTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052975.6 ENSMUST00000214690.2 |
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