Pregenerated sensors for OLFR43 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070377Ensembl transcript IDs: ENSMUST00000205664.3, ENSMUST00000215550.3
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAACACTTAGACTCCCAACTTCCTTGTCAGTCTGCCTGTGGGAACTaGATCCAGAGCAGTGTGCTGTACTCTGACCACGGGAGCAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: QHLDSQLPCQSACGN*IQSSVLYSDHGSRN Trigger: ATTTCTGCTCCCGTGGTCAGAGTACAGCACACTGCTCTGGATTCAGTTCCCACAGGCAGACTGACAAGGAAGTTGGGAGTCTAAGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR TCA 90 bp | AACTATCAGAAGGCTCCCAAGGAAAGGGATTTCAACCTGGAAAGATaGCAAGCAGCTCCTTGCAGGGGTGACATTGAAGCTGAGTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: NYQKAPKERDFNLER*QAAPCRGDIEAEFP Trigger: AGGAAACTCAGCTTCAATGTCACCCCTGCAAGGAGCTGCTTGTCATCTTTCCAGGTTGAAATCCCTTTCCTTGGGAGCCTTCTGATAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR CAA 90 bp | ATTTCAACCTGGAAAGATGACAAGCAGCTCCTTGCAGGGGTGACATaGAAGCTGAGTTTCCTAGTGCTTCTGACTTGGGACCACAGTATC | + |
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Preference number: 2 (lower is better) Translates to: ISTWKDDKQLLAGVT*KLSFLVLLTWDHSI Trigger: GATACTGTGGTCCCAAGTCAGAAGCACTAGGAAACTCAGCTTCAATGTCACCCCTGCAAGGAGCTGCTTGTCATCTTTCCAGGTTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR TCA 72 bp | GACTCCCAACTTCCTTGTCAGTCTGCCTGTGGGAACTaGATCCAGAGCAGTGTGCTGTACTCTGACCACGGG | + |
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Preference number: 3 (lower is better) Translates to: DSQLPCQSACGN*IQSSVLYSDHG Trigger: CCCGTGGTCAGAGTACAGCACACTGCTCTGGATTCAGTTCCCACAGGCAGACTGACAAGGAAGTTGGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR GCA 72 bp | GTCAGTCTGCCTGTGGGAACTGAATCCAGAGCAGTGTaGTGTACTCTGACCACGGGAGCAGAAATGTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: VSLPVGTESRAV*CTLTTGAEMCF Trigger: AAAACACATTTCTGCTCCCGTGGTCAGAGTACAGCACACTGCTCTGGATTCAGTTCCCACAGGCAGACTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR-3UTR CAA 90 bp | AGTTACCTCCATAAACTATCAGAAGGCTCCCAAGGAAAGGGATTTCAACCTGGACTTGCAGGGGTGACATaGAAGCTGAGTTTCCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: SYLHKLSEGSQGKGFQPGLAGVT*KLSFLV Trigger: CACTAGGAAACTCAGCTTCAATGTCACCCCTGCAAG...TCCAGGTTGAAATCCCTTTCCTTGGGAGCCTTCTGATAGTTTATGGAGGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR TCA 72 bp | CTGTGGGAACTGAATCCAGAGCAGTGTGCTGTACTCTaGCCACGGGAGCAGAAATGTGTTTTGAAATCAGTA | + |
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Preference number: 3 (lower is better) Translates to: LWELNPEQCAVL*PREQKCVLKSV Trigger: TACTGATTTCAAAACACATTTCTGCTCCCGTGGTCAGAGTACAGCACACTGCTCTGGATTCAGTTCCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR-3UTR CAA 90 bp | CGGGAGCAGAAATGTGTTTTGAAATCAGTAGAGTCCATAAGTTACCTCCATAAACTTGCAGGGGTGACATaGAAGCTGAGTTTCCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: REQKCVLKSVESISYLHKLAGVT*KLSFLV Trigger: CACTAGGAAACTCAGCTTCAATGTCACCCCTGCAAG...TTTATGGAGGTAACTTATGGACTCTACTGATTTCAAAACACATTTCTGCTCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR TCA 72 bp | AATGCTCATGCAAACAGTAATCTAGTCTTTAAAGCATaGGCTACTGTGATCACATCCTGTGACATGGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: NAHANSNLVFKA*ATVITSCDMGK Trigger: TTTACCCATGTCACAGGATGTGATCACAGTAGCTCATGCTTTAAAGACTAGATTACTGTTTGCATGAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| CDS-3UTR CCA 90 bp | CCAAGGAAAGGGATTTCAACCTGGAAAGATGACAAGCAGCTCCTTGCAGGGGTGGAGGAAGAGGGGCAGTaGAAGAGTTTCTTCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: PRKGISTWKDDKQLLAGVEEEGQ*KSFFRA Trigger: TGCTCTGAAGAAACTCTTCCACTGCCCCTCTTCCTC...CACCCCTGCAAGGAGCTGCTTGTCATCTTTCCAGGTTGAAATCCCTTTCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| 3UTR CAA 72 bp | TGGAAAGATGACAAGCAGCTCCTTGCAGGGGTGACATaGAAGCTGAGTTTCCTAGTGCTTCTGACTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: WKDDKQLLAGVT*KLSFLVLLTWD Trigger: GTCCCAAGTCAGAAGCACTAGGAAACTCAGCTTCAATGTCACCCCTGCAAGGAGCTGCTTGTCATCTTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| CDS-3UTR CCA 90 bp | CGGGAGCAGAAATGTGTTTTGAAATCAGTAGAGTCCATAAGTTACCTCCATAAAGAGGAAGAGGGGCAGTaGAAGAGTTTCTTCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: REQKCVLKSVESISYLHKEEEGQ*KSFFRA Trigger: TGCTCTGAAGAAACTCTTCCACTGCCCCTCTTCCTC...TTTATGGAGGTAACTTATGGACTCTACTGATTTCAAAACACATTTCTGCTCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| CDS-3UTR GCA 90 bp | ATGAAGTCAACACTTAGACTCCCAACTTCCTTGTCAGTCTGCCTGTGGGAACTGATAACTGTCTGTATTTaGCAAGCCTATCATGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: MKSTLRLPTSLSVCLWELITVCI*QAYHEV Trigger: TACTTCATGATAGGCTTGGCAAATACAGACAGTTAT...CAGTTCCCACAGGCAGACTGACAAGGAAGTTGGGAGTCTAAGTGTTGACTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| CDS-3UTR GCA 90 bp | AGTTACCTCCATAAACTATCAGAAGGCTCCCAAGGAAAGGGATTTCAACCTGGAATAACTGTCTGTATTTaGCAAGCCTATCATGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: SYLHKLSEGSQGKGFQPGITVCI*QAYHEV Trigger: TACTTCATGATAGGCTTGGCAAATACAGACAGTTAT...TCCAGGTTGAAATCCCTTTCCTTGGGAGCCTTCTGATAGTTTATGGAGGTAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| CDS-3UTR CAA 90 bp | ATGAAGTCAACACTTAGACTCCCAACTTCCTTGTCAGTCTGCCTGTGGGAACTGTTGGCCACATCCTTATaGCCACAGAAGGACAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: MKSTLRLPTSLSVCLWELLATSL*PQKDSL Trigger: TAGACTGTCCTTCTGTGGCAATAAGGATGTGGCCAA...CAGTTCCCACAGGCAGACTGACAAGGAAGTTGGGAGTCTAAGTGTTGACTTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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| CDS-3UTR CAA 90 bp | CGGGAGCAGAAATGTGTTTTGAAATCAGTAGAGTCCATAAGTTACCTCCATAAATTGGCCACATCCTTATaGCCACAGAAGGACAGTCTA | + |
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Preference number: 5 (lower is better) Translates to: REQKCVLKSVESISYLHKLATSL*PQKDSL Trigger: TAGACTGTCCTTCTGTGGCAATAAGGATGTGGCCAA...TTTATGGAGGTAACTTATGGACTCTACTGATTTCAAAACACATTTCTGCTCCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205664.3 ENSMUST00000215550.3 |
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