Pregenerated sensors for OLFR420 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055033Ensembl transcript IDs: ENSMUST00000068403.4, ENSMUST00000213748.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGATGTGCCTGCCTCTGCCTCTCATGTTCTGGGATTCAAGGTGTaGGCCTCTACAGCAGGTTTGTTGACATCCCTGTTTGTTGTTCAT | + |
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Preference number: 1 (lower is better) Translates to: RDVPASASHVLGFKV*ASTAGLLTSLFVVH Trigger: ATGAACAACAAACAGGGATGTCAACAAACCTGCTGTAGAGGCTCACACCTTGAATCCCAGAACATGAGAGGCAGAGGCAGGCACATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR TCA 90 bp | CTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATaGAGGTTGTATTTACAAAGCTCCATTAATGTTACCACACCACAA | + |
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Preference number: 1 (lower is better) Translates to: LSPRKKPCVLNSVYL*RLYLQSSINVTTPQ Trigger: TTGTGGTGTGGTAACATTAATGGAGCTTTGTAAATACAACCTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR TCA 90 bp | TGTTTTAGTAGCTCTCACTATCTCCAAGAAAGAAACCATGTGTCCTaGATTCTGTGTACCTATGAAGGTTGTATTTACAAAGCTCCATTA | + |
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Preference number: 1 (lower is better) Translates to: CFSSSHYLQERNHVS*ILCTYEGCIYKAPL Trigger: TAATGGAGCTTTGTAAATACAACCTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAGAGCTACTAAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 90 bp | ATGTACAGAAACAAGGATAGTGGGCTGACGACTACAGGGTTTGCGTaGGTGGAAGGAAGAGAGGTAAGAATTTGTCGGTATAAAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: MYRNKDSGLTTTGFA*VEGREVRICRYKRI Trigger: TATTCTTTTATACCGACAAATTCTTACCTCTCTTCCTTCCACCAACGCAAACCCTGTAGTCGTCAGCCCACTATCCTTGTTTCTGTACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAAGGAACTCACAGAGATGTaGCTGCCTCTGCCTCTCATG | + |
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Preference number: 2 (lower is better) Translates to: SQTKLFLMKHVWQVLSAKELTEM*LPLPLM Trigger: CATGAGAGGCAGAGGCAGGCACATCTCTGTGAGTTC...CTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR GCA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTAGCTGGTCCAGCACCTaGGATGTGGAAACAAATGAA | + |
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Preference number: 2 (lower is better) Translates to: SFKLRVNRLVSCILDQHSSWSST*DVETNE Trigger: TTCATTTGTTTCCACATCGCAGGTGCTGGACCAGCT...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAGATGTGCCTGCCTCTaGCTCTCATGTTCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: YVPDKIIPYETCMASFVSRCACL*LSCSGI Trigger: AATCCCAGAACATGAGAGGCAGAGGCAGGCACATCT...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCTCACAGAGATGTGCCTaGCTCTGCCTCTCATGTTCT | + |
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Preference number: 2 (lower is better) Translates to: YVPDKIIPYETCMASFVSSQRCA*LCLSCS Trigger: AGAACATGAGAGGCAGAGGCAGGCACATCTCTGTGA...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAAGCTCTCTATGCAGCCCTaGCTAACTTGGAACTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SQTKLFLMKHVWQVLSAKLSMQP*LTWNSL Trigger: TAGAGAGTTCCAAGTTAGCCAGGGCTGCATAGAGAG...CTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 90 bp | CACACATTTTCAGAAACAACTGACGACACATATAGTCCAAGACTATaGCCTGAATCCCTGTGTTGTTTTACTCTCATTCCAATAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: HTFSETTDDTYSPRL*PESLCCFTLIPITE Trigger: CTCTGTTATTGGAATGAGAGTAAAACAACACAGGGATTCAGGCAATAGTCTTGGACTATATGTGTCGTCAGTTGTTTCTGAAAATGTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAAGCTACAGCAGGTTTGTTaGCATCCCTGTTTGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SQTKLFLMKHVWQVLSAKLQQVC*HPCLLF Trigger: GAACAACAAACAGGGATGTCAACAAACCTGCTGTAG...CTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR GCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGATGCATTGCTCAATATaGATGGCATATGAGAGTACA | + |
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Preference number: 2 (lower is better) Translates to: LTISKKETMCPEFCVPMKMHCSI*MAYEST Trigger: TGTACTCTCATATGCCATGCATATTGAGCAATGCAT...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAAGCGATGTGGAAACAAATaGATTCTTAGGCTTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SQTKLFLMKHVWQVLSAKRCGNK*ILRLAA Trigger: AGCTGCAAGCCTAAGAATTCATTTGTTTCCACATCG...CTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGTTCTGTTCATTATGTTaGCCTGTTAGCTACAACAAT | + |
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Preference number: 2 (lower is better) Translates to: LTISKKETMCPEFCVPMKFCSLC*PVSYNN Trigger: ATTGTTGTAGCTAACAGGCCAACATAATGAACAGAA...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCCAGCACTCTAACAACTaGATTTCAGTCCAAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: YVPDKIIPYETCMASFVSQHSNN*ISVQVF Trigger: GAATACTTGGACTGAAATTCAGTTGTTAGAGTGCTG...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGACACGTAAACTTTGTATaGCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: WKERPIGHVNFV*PSTGERQGQKG Trigger: CCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATACAAAGTTTACGTGTCCAATGGGCCTCTCTTTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGGGATGCTGTGGAGTCTaGTTTGACCTCTTCGACCCA | + |
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Preference number: 3 (lower is better) Translates to: LTISKKETMCPEFCVPMKGCCGV*FDLFDP Trigger: TGGGTCGAAGAGGTCAAACAAGACTCCACAGCATCC...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR GCA 72 bp | CCTGTGTTGTTTTACTCTCATTCCAATAACAGAGGATaGTGTGGAGTCTTGTTTGACCTCTTCGACCCACAG | + |
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Preference number: 3 (lower is better) Translates to: PVLFYSHSNNRG*CGVLFDLFDPQ Trigger: CTGTGGGTCGAAGAGGTCAAACAAGACTCCACAGCATCCTCTGTTATTGGAATGAGAGTAAAACAACACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR GCA 72 bp | AAATGTTTGCCATTAAACGAGAGCTGGTCCAGCACCTaGGATGTGGAAACAAATGAATTCTTAGGCTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: KCLPLNESWSST*DVETNEFLGLQ Trigger: CTGCAAGCCTAAGAATTCATTTGTTTCCACATCGCAGGTGCTGGACCAGCTCTCGTTTAATGGCAAACATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGTTCATCCCACCCACATaGACATGTATGTCCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: LTISKKETMCPEFCVPMKFIPPT*TCMSQT Trigger: TGTCTGGGACATACATGTCAATGTGGGTGGGATGAA...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGCATGTATGGCAAGTTTaGTCAGCAAAGGAAGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LTISKKETMCPEFCVPMKHVWQV*SAKEVH Trigger: GTGGACTTCCTTTGCTGACAAAACTTGCCATACATG...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR GCA 72 bp | CAGAAACAACTGACGACACATATAGTCCAAGACTATTaGCTGAATCCCTGTGTTGTTTTACTCTCATTCCAA | + |
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Preference number: 3 (lower is better) Translates to: QKQLTTHIVQDY*LNPCVVLLSFQ Trigger: TTGGAATGAGAGTAAAACAACACAGGGATTCAGGCAATAGTCTTGGACTATATGTGTCGTCAGTTGTTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CCA 72 bp | ATGTCCCAGACAAAATTATTCCTTATGAAACATGTATaGCAAGTTTTGTCAGCAAAGGAAGTCCACCACACT | + |
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Preference number: 3 (lower is better) Translates to: MSQTKLFLMKHV*QVLSAKEVHHT Trigger: AGTGTGGTGGACTTCCTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAAGAATGAATTCTTAGGCTaGCAGCTAGTCAATTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SQTKLFLMKHVWQVLSAKNEFLG*QLVNSA Trigger: AGCTGAATTGACTAGCTGCAAGCCTAAGAATTCATT...CTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR TCA 72 bp | CATCCCTTTCCTTTGCATATAAATGGCATTAGCTGTTaGAATGTAAACCCTTCCTTTTTACTTTTGCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: HPFPLHINGISC*NVNPSFLLLPF Trigger: GAAAGGCAAAAGTAAAAAGGAAGGGTTTACATTTCAACAGCTAATGCCATTTATATGCAAAGGAAAGGGATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR TCA 72 bp | AGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATaGAGGTTGTATTTACAAAGCTCCATTAATGTTACC | + |
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Preference number: 3 (lower is better) Translates to: RKKPCVLNSVYL*RLYLQSSINVT Trigger: GGTAACATTAATGGAGCTTTGTAAATACAACCTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR GCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGTGGTGTGGGTATCTGTaGAGGCCAGGCGCAGCACCG | + |
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Preference number: 4 (lower is better) Translates to: LTISKKETMCPEFCVPMKWCGYL*RPGAAP Trigger: CGGTGCTGCGCCTGGCCTGCACAGATACCCACACCA...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR TCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGTCTCAGGGAGGGGTGTaGGAAAGCCACAGACACAGC | + |
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Preference number: 4 (lower is better) Translates to: LTISKKETMCPEFCVPMKSQGGV*ESHRHS Trigger: GCTGTGTCTGTGGCTTTCTCACACCCCTCCCTGAGA...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGCAACCGAGGGTCAGCTaGGCACACAGTCTGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: LTISKKETMCPEFCVPMKQPRVS*AHSLEV Trigger: GACTTCCAGACTGTGTGCCCAGCTGACCCTCGGTTG...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGGGTGCGAGACGCACGTaGAAAATGCTTTACGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LTISKKETMCPEFCVPMKGARRT*KMLYGG Trigger: GCCGCCGTAAAGCATTTTCCACGTGCGTCTCGCACC...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 72 bp | AACAAGGATAGTGGGCTGACGACTACAGGGTTTGCGTaGGTGGAAGGAAGAGAGGTAAGAATTTGTCGGTAT | + |
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Preference number: 4 (lower is better) Translates to: NKDSGLTTTGFA*VEGREVRICRY Trigger: ATACCGACAAATTCTTACCTCTCTTCCTTCCACCAACGCAAACCCTGTAGTCGTCAGCCCACTATCCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR GCA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTGACGCACGTGGAAAATaGTTTACGGCGGCCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SFKLRVNRLVSCILDQHSDARGK*FTAAFS Trigger: GCTGAAGGCCGCCGTAAAGCATTTTCCACGTGCGTC...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 72 bp | CTCATTCCAATAACAGAGGATGCTGTGGAGTCTTGTTaGACCTCTTCGACCCACAGCATAAAACTTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: LIPITEDAVESC*TSSTHSIKLFS Trigger: TGAGAAAAGTTTTATGCTGTGGGTCGAAGAGGTCAAACAAGACTCCACAGCATCCTCTGTTATTGGAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CCA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTAGGTGTGCGTTGAGCTaGACCACTGTGATGATAACC | + |
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Preference number: 4 (lower is better) Translates to: SFKLRVNRLVSCILDQHSRCALS*TTVMIT Trigger: GGTTATCATCACAGTGGTCCAGCTCAACGCACACCT...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGCACAAAAAGGAAGTGTaGAGATCCAGGCAATCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LTISKKETMCPEFCVPMKHKKEV*RSRQSQ Trigger: CTGAGATTGCCTGGATCTCCACACTTCCTTTTTGTG...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCCAAAGGCCAGAGCAATaGCAGTGTCCCAGAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: YVPDKIIPYETCMASFVSQRPEQ*QCPRTR Trigger: CCTTGTTCTGGGACACTGCCATTGCTCTGGCCTTTG...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 72 bp | GAACAACATTATGAACTAACCAGTACCCCAGAGCTCTaGACTCTAGCTGCATATGTATCAAAAGATGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: EQHYELTSTPEL*TLAAYVSKDGL Trigger: TAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTAGTTCATAATGTTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR TCA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTAGAGACAAACCTCACTaGTGCCTGTGGAATGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SFKLRVNRLVSCILDQHSRDKPH*CLWNGR Trigger: TCTTCCATTCCACAGGCATCAGTGAGGTTTGTCTCT...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR GCA 90 bp | CTCACTATCTCCAAGAAAGAAACCATGTGTCCTGAATTCTGTGTACCTATGAAGAAAAAGACAGTAAGGTaGGAGACGCACGTGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: LTISKKETMCPEFCVPMKKKTVR*ETHVEN Trigger: ATTTTCCACGTGCGTCTCGCACCTTACTGTCTTTTT...CTTCATAGGTACACAGAATTCAGGACACATGGTTTCTTTCTTGGAGATAGTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAAGTTGGGATGGTGGCAGTaGTGTACCATATCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SQTKLFLMKHVWQVLSAKLGWWQ*CTISPG Trigger: TCCTGGAGATATGGTACACCACTGCCACCATCCCAA...CTTTGCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR TCA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTACAATATCTACCACCTaGATCATGACGATGGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SFKLRVNRLVSCILDQHSTISTT*IMTMVW Trigger: CCACACCATCGTCATGATTCAGGTGGTAGATATTGT...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 72 bp | TCAGAAACAACTGACGACACATATAGTCCAAGACTATaGCCTGAATCCCTGTGTTGTTTTACTCTCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SETTDDTYSPRL*PESLCCFTLIP Trigger: TGGAATGAGAGTAAAACAACACAGGGATTCAGGCAATAGTCTTGGACTATATGTGTCGTCAGTTGTTTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR GCA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTTCTTGCCAATTAAGATaGCAGCTTGACCTATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SFKLRVNRLVSCILDQHSSCQLR*QLDLCA Trigger: AGCACATAGGTCAAGCTGGCATCTTAATTGGCAAGA...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR GCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCGGAGGTTTCTGCTCTTaGCAATTAAGATGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: YVPDKIIPYETCMASFVSGGFCS*QLRCQL Trigger: AAGCTGGCATCTTAATTGGCAAGAGCAGAAACCTCC...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR GCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCGAAAATGAGCATCACTaGCGTAATTATCTCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: YVPDKIIPYETCMASFVSENEHH*RNYLHS Trigger: GCTGTGGAGATAATTACGGCAGTGATGCTCATTTTC...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| 3UTR CAA 72 bp | CGGTATAAAAGAATAATGAGCTTCATCCCACCCACATaGACATGTATGTCCCAGACAAAATTATTCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: RYKRIMSFIPPT*TCMSQTKLFLM Trigger: CATAAGGAATAATTTTGTCTGGGACATACATGTCAATGTGGGTGGGATGAAGCTCATTATTCTTTTATACCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR TCA 90 bp | TATGTCCCAGACAAAATTATTCCTTATGAAACATGTATGGCAAGTTTTGTCAGCAAGATATGCTCAAGGTaGTTAGAGCCACAAAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: YVPDKIIPYETCMASFVSKICSR*LEPQKG Trigger: TCCTTTTTGTGGCTCTAATCACCTTGAGCATATCTT...GCTGACAAAACTTGCCATACATGTTTCATAAGGAATAATTTTGTCTGGGACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS CCA 90 bp | GATAACCAGGTTCCCAACGATAATGAAAGCATAGATGAAGAGCAGTaGGATGAAGCAGATGACAGAATCTCCCCAGGAGCAAGGGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: DNQVPNDNESIDEEQ*DEADDRISPGARES Trigger: GCTTTCCCTTGCTCCTGGGGAGATTCTGTCATCTGCTTCATCCCACTGCTCTTCATCTATGCTTTCATTATCGTTGGGAACCTGGTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068403.4 ENSMUST00000213748.2 |
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| CDS-3UTR CAA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTGTGTGGAGGTGTGCGTaGAGCTGGACCACTGTGATG | + |
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Preference number: 5 (lower is better) Translates to: SFKLRVNRLVSCILDQHSVWRCA*SWTTVM Trigger: CATCACAGTGGTCCAGCTCAACGCACACCTCCACAC...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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| CDS-3UTR CAA 90 bp | TCATTTAAACTGAGAGTCAATCGCTTAGTCTCATGTATTCTAGATCAGCACTCTGGGAGGTTTCTGCTCTaGCCAATTAAGATGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SFKLRVNRLVSCILDQHSGRFLL*PIKMPA Trigger: AGCTGGCATCTTAATTGGCAAGAGCAGAAACCTCCC...AGAGTGCTGATCTAGAATACATGAGACTAAGCGATTGACTCTCAGTTTAAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213748.2 |
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