Pregenerated sensors for OLFR419 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050788Ensembl transcript IDs: ENSMUST00000061990.5, ENSMUST00000214725.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGATGCAGTGAGGGGTGAGGAGCAAAAGCAGCAAGAGGGCTTCTaGCTACCCAGCATCTTCCAGACTACATCCCGAGTTTCAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: RDAVRGEEQKQQEGF*LPSIFQTTSRVSGL Trigger: AAGGCCTGAAACTCGGGATGTAGTCTGGAAGATGCTGGGTAGGCAGAAGCCCTCTTGCTGCTTTTGCTCCTCACCCCTCACTGCATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CCA 90 bp | ACAGTAAACAGAGCAAGAACTCCTGTTTTATCCTTCCAGGCATCATaGGAGGAAAGGCAAAGGAGGGATGTGGAGTTTTGGTACAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TVNRARTPVLSFQAS*EERQRRDVEFWYSS Trigger: ACTGCTGTACCAAAACTCCACATCCCTCCTTTGCCTTTCCTCCCATGATGCCTGGAAGGATAAAACAGGAGTTCTTGCTCTGTTTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR GCA 90 bp | CCTCCCTACTCATGTGCTGATCTTTCTAAATCGCAGATATCTTTCTaGTCCATTTATTATGCCCTGTCTCCTGCTTCACAAAAGGATCAT | + |
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Preference number: 1 (lower is better) Translates to: PPYSCADLSKSQISF*SIYYALSPASQKDH Trigger: ATGATCCTTTTGTGAAGCAGGAGACAGGGCATAATAAATGGAGCAGAAAGATATCTGCGATTTAGAAAGATCAGCACATGAGTAGGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR TCA 90 bp | CTTGAACAACAAAAACTCCCTAGGCTAACACATTTCTCATTTGTATaGCTTTCACTTTCTCTGACCCACTCAGTTGTCTCTGTAACATAT | + |
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Preference number: 1 (lower is better) Translates to: LEQQKLPRLTHFSFV*LSLSLTHSVVSVTY Trigger: ATATGTTACAGAGACAACTGAGTGGGTCAGAGAAAGTGAAAGTCATACAAATGAGAAATGTGTTAGCCTAGGGAGTTTTTGTTGTTCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR TCA 90 bp | TTTATTATGCCCTGTCTCCTGCTTCACAAAAGGATCATACTGAAGTaGGATATTCAACTGATGACTTCCTTGAACAACAAAAACTCCCTA | + |
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Preference number: 1 (lower is better) Translates to: FIMPCLLLHKRIILK*DIQLMTSLNNKNSL Trigger: TAGGGAGTTTTTGTTGTTCAAGGAAGTCATCAGTTGAATATCTCACTTCAGTATGATCCTTTTGTGAAGCAGGAGACAGGGCATAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CCA 90 bp | TCATTGTATAATCACTTTAAAATTCTCTACAATGCTCCTGGATCTTaGCATCGTAGCCTTGAAATTCTTTCATCTTGTTTAGCTCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: SLYNHFKILYNAPGS*HRSLEILSSCLAQL Trigger: CAGCTGAGCTAAACAAGATGAAAGAATTTCAAGGCTACGATGCCAAGATCCAGGAGCATTGTAGAGAATTTTAAAGTGATTATACAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CCA 90 bp | CCACGGACTAAAAGCCAGCATCACAACATTGTTACAAGTAGCAAGTaGCATTCATTAAAATATGACTATGACTCGAGTATATTGATAAAT | + |
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Preference number: 1 (lower is better) Translates to: PRTKSQHHNIVTSSK*HSLKYDYDSSILIN Trigger: ATTTATCAATATACTCGAGTCATAGTCATATTTTAATGAATGCCACTTGCTACTTGTAACAATGTTGTGATGCTGGCTTTTAGTCCGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCTCTGCTGAAACTCTCTATCCTCCCTACTCATGTGCTGATCTTTCTAAATCAGCAAGAGGGCTTCTaGCTACCCAGCATCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLLKLSILPTHVLIFLNQQEGF*LPSIFQ Trigger: CTGGAAGATGCTGGGTAGGCAGAAGCCCTCTTGCTG...ATTTAGAAAGATCAGCACATGAGTAGGGAGGATAGAGAGTTTCAGCAGAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR-3UTR CCA 90 bp | ACACACAAACTTAGTCAGGAAGCTGTCTCAGATCCACGGACTAAAAGCCAGCATGGCAAAGGAGGGATGTaGAGTTTTGGTACAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: THKLSQEAVSDPRTKSQHGKGGM*SFGTAV Trigger: AACTGCTGTACCAAAACTCCACATCCCTCCTTTGCC...ATGCTGGCTTTTAGTCCGTGGATCTGAGACAGCTTCCTGACTAAGTTTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CAA 90 bp | CTTCCAGGCATCATGGGAGGAAAGGCAAAGGAGGGATGTGGAGTTTaGGTACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTG | + |
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Preference number: 2 (lower is better) Translates to: LPGIMGGKAKEGCGV*VQQFCPNCKISSPL Trigger: CAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTACCAAAACTCCACATCCCTCCTTTGCCTTTCCTCCCATGATGCCTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGCTGTCTCAGATCCACGGACTAAAAGCCAGCATCACAACATTGTTACAAATTTGGAGCTCACTGTaGGTTGAACACAGTAAACAG | + |
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Preference number: 2 (lower is better) Translates to: RKLSQIHGLKASITTLLQIWSSL*VEHSKQ Trigger: CTGTTTACTGTGTTCAACCCACAGTGAGCTCCAAAT...TTGTAACAATGTTGTGATGCTGGCTTTTAGTCCGTGGATCTGAGACAGCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CAA 90 bp | GGGCTATCAGTTTATATTTCTCAGGTCATTTATATTTCCATCTCCTaGATAAGCCTGGTGGATCTGGAGCTTAGCATCTCAAAGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GLSVYISQVIYISIS*ISLVDLELSISKPS Trigger: TGAAGGCTTTGAGATGCTAAGCTCCAGATCCACCAGGCTTATCAAGGAGATGGAAATATAAATGACCTGAGAAATATAAACTGATAGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CAA 90 bp | TATGAGACTGAAGGTGAATATTTAAGATTTGGAGCTCACTGTGGGTaGAACACAGTAAACAGAGCAAGAACTCCTGTTTTATCCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: YETEGEYLRFGAHCG*NTVNRARTPVLSFQ Trigger: CTGGAAGGATAAAACAGGAGTTCTTGCTCTGTTTACTGTGTTCAACCCACAGTGAGCTCCAAATCTTAAATATTCACCTTCAGTCTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCGCAGATATCTTTCTGCTCCATTTATTATGCCCTGTCTCCTGCTTCACAAACACAGCTAGTTAGTTaGAGAGCTTGTGTTCACATT | + |
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Preference number: 2 (lower is better) Translates to: KSQISFCSIYYALSPASQTQLVS*RACVHI Trigger: AATGTGAACACAAGCTCTTCAACTAACTAGCTGTGT...TTGTGAAGCAGGAGACAGGGCATAATAAATGGAGCAGAAAGATATCTGCGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR GCA 72 bp | GTGAGGGGTGAGGAGCAAAAGCAGCAAGAGGGCTTCTaGCTACCCAGCATCTTCCAGACTACATCCCGAGTT | + |
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Preference number: 3 (lower is better) Translates to: VRGEEQKQQEGF*LPSIFQTTSRV Trigger: AACTCGGGATGTAGTCTGGAAGATGCTGGGTAGGCAGAAGCCCTCTTGCTGCTTTTGCTCCTCACCCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCTGCCTACCCAGCATCTTCCAGACTACATCCCGAGTTTCAGGCCTTGGAGTTTCTCGATTTGTTTaGATAATTGGGAGTGGCATC | + |
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Preference number: 3 (lower is better) Translates to: GFCLPSIFQTTSRVSGLGVSRFV*IIGSGI Trigger: GATGCCACTCCCAATTATCAAAACAAATCGAGAAAC...TCCAAGGCCTGAAACTCGGGATGTAGTCTGGAAGATGCTGGGTAGGCAGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR TCA 72 bp | GCAAGTAACTTACCCAGCTTAACACAGCTAGTTAGTTaGAGAGCTTGTGTTCACATTCCTGCCAGGCTACTG | + |
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Preference number: 3 (lower is better) Translates to: ASNLPSLTQLVS*RACVHIPARLL Trigger: CAGTAGCCTGGCAGGAATGTGAACACAAGCTCTTCAACTAACTAGCTGTGTTAAGCTGGGTAAGTTACTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR TCA 72 bp | CCCTGTCTCCTGCTTCACAAAAGGATCATACTGAAGTaGGATATTCAACTGATGACTTCCTTGAACAACAAA | + |
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Preference number: 3 (lower is better) Translates to: PCLLLHKRIILK*DIQLMTSLNNK Trigger: TTTGTTGTTCAAGGAAGTCATCAGTTGAATATCTCACTTCAGTATGATCCTTTTGTGAAGCAGGAGACAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR TCA 72 bp | CCTAAGGTAATAGCTAGGATTCCTTCCTTGTCTCCTTaGTTCTTATTTGTCTCTGCTGAAACTCTCTATCCT | + |
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Preference number: 3 (lower is better) Translates to: PKVIARIPSLSP*FLFVSAETLYP Trigger: AGGATAGAGAGTTTCAGCAGAGACAAATAAGAATCAAGGAGACAAGGAAGGAATCCTAGCTATTACCTTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR TCA 72 bp | TTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTaGACCTGGTCTAGGGTGTGCTTATGCAAATGTCTC | + |
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Preference number: 3 (lower is better) Translates to: FCPNCKISSPLY*TWSRVCLCKCL Trigger: GAGACATTTGCATAAGCACACCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| 3UTR CCA 72 bp | AATCACTTTAAAATTCTCTACAATGCTCCTGGATCTTaGCATCGTAGCCTTGAAATTCTTTCATCTTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: NHFKILYNAPGS*HRSLEILSSCL Trigger: TAAACAAGATGAAAGAATTTCAAGGCTACGATGCCAAGATCCAGGAGCATTGTAGAGAATTTTAAAGTGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| 3UTR CCA 72 bp | AAAAGCCAGCATCACAACATTGTTACAAGTAGCAAGTaGCATTCATTAAAATATGACTATGACTCGAGTATA | + |
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Preference number: 3 (lower is better) Translates to: KSQHHNIVTSSK*HSLKYDYDSSI Trigger: TATACTCGAGTCATAGTCATATTTTAATGAATGCCACTTGCTACTTGTAACAATGTTGTGATGCTGGCTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | GGCTTCTGCCTACCCAGCATCTTCCAGACTACATCCCGAGTTTCAGGCCTTGGAGCCAGAGAGCATCCTTaGGATGATTCCCAATGTGTA | + |
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Preference number: 4 (lower is better) Translates to: GFCLPSIFQTTSRVSGLGAREHP*DDSQCV Trigger: TACACATTGGGAATCATCCCAAGGATGCTCTCTGGC...TCCAAGGCCTGAAACTCGGGATGTAGTCTGGAAGATGCTGGGTAGGCAGAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | ACACACAAACTTAGTCAGGAAGCTGTCTCAGATCCACGGACTAAAAGCCAGCATAAGAAGACAAAGCCCTaGCAGCAGGTCACATTGCTC | + |
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Preference number: 4 (lower is better) Translates to: THKLSQEAVSDPRTKSQHKKTKP*QQVTLL Trigger: GAGCAATGTGACCTGCTGGCAGGGCTTTGTCTTCTT...ATGCTGGCTTTTAGTCCGTGGATCTGAGACAGCTTCCTGACTAAGTTTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR TCA 90 bp | TGTGGGTTGAACACAGTAAACAGAGCAAGAACTCCTGTTTTATCCTTCCAGGCAAGAGCATCCTTGGGATaGTTCCCAATGTGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CGLNTVNRARTPVLSFQARASLG*FPMCSR Trigger: CCTGCTACACATTGGGAATCATCCCAAGGATGCTCT...TGCCTGGAAGGATAAAACAGGAGTTCTTGCTCTGTTTACTGTGTTCAACCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | TTGTCTCTGCTGAAACTCTCTATCCTCCCTACTCATGTGCTGATCTTTCTAAATACAGGAGGAAGCAGTTaGTACAAGCCCAGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: LSLLKLSILPTHVLIFLNTGGSS*YKPRMQ Trigger: CTGCATCCTGGGCTTGTACCAACTGCTTCCTCCTGT...ATTTAGAAAGATCAGCACATGAGTAGGGAGGATAGAGAGTTTCAGCAGAGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | CAGCATCTTCCAGACTACATCCCGAGTTTCAGGCCTTGGAAGAACATTATTGATGGTACAAGCCCAGGATaGAGAGAAAAACATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QHLPDYIPSFRPWKNIIDGTSPG*REKHLC Trigger: ACACAGATGTTTTTCTCTGCATCCTGGGCTTGTACC...ATCAATAATGTTCTTCCAAGGCCTGAAACTCGGGATGTAGTCTGGAAGATGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | TTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGGTGTGCTGGGCACAGACAGTaGGATTCATACGGCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FAQIVKYLVHCIEPGLGCAGHRQ*DSYGWH Trigger: ATGCCAGCCGTATGAATCCCACTGTCTGTGCCCAGC...ACACCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | AGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGGATTGAGGAGAGGGGTTaGCACAGTGTAGGTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SFAQIVKYLVHCIEPGLGIEERG*HSVGDS Trigger: GCTGTCACCTACACTGTGGCAACCCCTCTCCTCAAT...CCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAATTGAGGAGAGGGGTTaGCACAGTGTAGGTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SSFAQIVKYLVHCIEPGLIEERG*HSVGDS Trigger: GCTGTCACCTACACTGTGGCAACCCCTCTCCTCAAT...TAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | TACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTACAGGAGGAAGCAGTTaGTACAAGCCCAGGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: YSSFAQIVKYLVHCIEPGTGGSS*YKPRMQ Trigger: CTGCATCCTGGGCTTGTACCAACTGCTTCCTCCTGT...ACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR TCA 90 bp | TGGTACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTAGAGCATCCTTGGGATaGTTCCCAATGTGTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: WYSSFAQIVKYLVHCIEPRASLG*FPMCSR Trigger: CCTGCTACACATTGGGAATCATCCCAAGGATGCTCT...AGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR TCA 90 bp | AAATCGCAGATATCTTTCTGCTCCATTTATTATGCCCTGTCTCCTGCTTCACAAATGAGAGACGAAAAATaGCTAGAGTCATTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KSQISFCSIYYALSPASQMRDEK*LESFPV Trigger: GACTGGGAATGACTCTAGTCATTTTTCGTCTCTCAT...TTGTGAAGCAGGAGACAGGGCATAATAAATGGAGCAGAAAGATATCTGCGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | TGGTACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTAAGAAGACAAAGCCCTaGCAGCAGGTCACATTGCTC | + |
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Preference number: 4 (lower is better) Translates to: WYSSFAQIVKYLVHCIEPKKTKP*QQVTLL Trigger: GAGCAATGTGACCTGCTGGCAGGGCTTTGTCTTCTT...AGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | TTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGGTGTTTTCTCAGAGCTGTCTaGACAGCCCGATTCCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: FAQIVKYLVHCIEPGLGCFLRAV*TARFLR Trigger: TCTAAGGAATCGGGCTGTGCAGACAGCTCTGAGAAA...ACACCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGGGCCAGAGAGCATCCTTaGGATGATTCCCAATGTGTA | + |
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Preference number: 4 (lower is better) Translates to: SFAQIVKYLVHCIEPGLGAREHP*DDSQCV Trigger: TACACATTGGGAATCATCCCAAGGATGCTCTCTGGC...CCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | TGGTACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTTTTCTCAGAGCTGTCTaGACAGCCCGATTCCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: WYSSFAQIVKYLVHCIEPFLRAV*TARFLR Trigger: TCTAAGGAATCGGGCTGTGCAGACAGCTCTGAGAAA...AGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | AGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGGAAGTGCTGGATTTCATaGGAGCTGCAGAATGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SFAQIVKYLVHCIEPGLGKCWIS*ELQNER Trigger: TCTCTCATTCTGCAGCTCCCATGAAATCCAGCACTT...CCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR TCA 90 bp | TTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGGTGTATGAGAGACGAAAAATaGCTAGAGTCATTCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: FAQIVKYLVHCIEPGLGCMRDEK*LESFPV Trigger: GACTGGGAATGACTCTAGTCATTTTTCGTCTCTCAT...ACACCCTAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | TGGTACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTACAAGCCCAGGATaGAGAGAAAAACATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: WYSSFAQIVKYLVHCIEPGTSPG*REKHLC Trigger: ACACAGATGTTTTTCTCTGCATCCTGGGCTTGTACC...AGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAAAGTGCTGGATTTCATaGGAGCTGCAGAATGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SSFAQIVKYLVHCIEPGLKCWIS*ELQNER Trigger: TCTCTCATTCTGCAGCTCCCATGAAATCCAGCACTT...TAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | TACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTTCTCAAGAGAGTAGCTaGCTTTGGGTCTCAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: YSSFAQIVKYLVHCIEPGSQESS*LWVSST Trigger: TGTACTTGAGACCCAAAGCCAGCTACTCTCTTGAGA...ACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CCA 90 bp | AGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTATCTCAAGAGAGTAGCTaGCTTTGGGTCTCAAGTACA | + |
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Preference number: 4 (lower is better) Translates to: SSFAQIVKYLVHCIEPGLSQESS*LWVSST Trigger: TGTACTTGAGACCCAAAGCCAGCTACTCTCTTGAGA...TAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| 3UTR CAA 72 bp | GAAGGTGAATATTTAAGATTTGGAGCTCACTGTGGGTaGAACACAGTAAACAGAGCAAGAACTCCTGTTTTA | + |
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Preference number: 4 (lower is better) Translates to: EGEYLRFGAHCG*NTVNRARTPVL Trigger: TAAAACAGGAGTTCTTGCTCTGTTTACTGTGTTCAACCCACAGTGAGCTCCAAATCTTAAATATTCACCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAGGATTTCATGGGAGCTaGAGAATGAGAGACGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: SSFAQIVKYLVHCIEPGLGFHGS*RMRDEK Trigger: TTTTTCGTCTCTCATTCTGCAGCTCCCATGAAATCC...TAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | ATATCTTTCTGCTCCATTTATTATGCCCTGTCTCCTGCTTCACAAAAGGATCATAGGGATTCTCAGGATTaGTACCAAAATATAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: ISFCSIYYALSPASQKDHRDSQD*YQNIGI Trigger: TATGCCTATATTTTGGTAGCAATCCTGAGAATCCCT...ATGATCCTTTTGTGAAGCAGGAGACAGGGCATAATAAATGGAGCAGAAAGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTCTAAGGGATTCTCAGGATTaGTACCAAAATATAGGCATA | + |
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Preference number: 4 (lower is better) Translates to: SSFAQIVKYLVHCIEPGLRDSQD*YQNIGI Trigger: TATGCCTATATTTTGGTAGCAATCCTGAGAATCCCT...TAGACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| 3UTR CAA 72 bp | GTCATGATTAAGAAAATTCTTGTTTCTCGATTTGTTTaGATAATTGGGAGTGGCATCTATGAGACTGAAGGT | + |
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Preference number: 4 (lower is better) Translates to: VMIKKILVSRFV*IIGSGIYETEG Trigger: ACCTTCAGTCTCATAGATGCCACTCCCAATTATCAAAACAAATCGAGAAACAAGAATTTTCTTAATCATGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS CCA 90 bp | GGTATCCACTCAGGAAGGAGGTGCCAACTAGCTGGGCACAGACAGTaGGATTCATACGGCTGGCATAATGAAGTGGGGCACAGATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: GIHSGRRCQLAGHRQ*DSYGWHNEVGHRWP Trigger: TGGCCATCTGTGCCCCACTTCATTATGCCAGCCGTATGAATCCCACTGTCTGTGCCCAGCTAGTTGGCACCTCCTTCCTGAGTGGATACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS GCA 90 bp | CTAGAGTCATTCCCAGTCCAAAAAGGTATCCACTCAGGAAGGAGGTaGCAACTAGCTGGGCACAGACAGTGGGATTCATACGGCTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LESFPVQKGIHSGRR*QLAGHRQWDSYGWH Trigger: ATGCCAGCCGTATGAATCCCACTGTCTGTGCCCAGCTAGTTGGCACCTCCTTCCTGAGTGGATACCTTTTTGGACTGGGAATGACTCTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS-3UTR CAA 90 bp | AGGAAGCTGTCTCAGATCCACGGACTAAAAGCCAGCATCACAACATTGTTACAAAAGGGATTCTCAGGATaGCTACCAAAATATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: RKLSQIHGLKASITTLLQKGFSG*LPKYRH Trigger: ATGCCTATATTTTGGTAGCAATCCTGAGAATCCCTT...TTGTAACAATGTTGTGATGCTGGCTTTTAGTCCGTGGATCTGAGACAGCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000214725.2 |
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| CDS-3UTR CAA 90 bp | TACAGCAGTTTTGCCCAAATTGTAAAATATCTAGTCCATTGTATTGAACCTGGTAAGGGATTCTCAGGATaGCTACCAAAATATAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: YSSFAQIVKYLVHCIEPGKGFSG*LPKYRH Trigger: ATGCCTATATTTTGGTAGCAATCCTGAGAATCCCTT...ACCAGGTTCAATACAATGGACTAGATATTTTACAATTTGGGCAAAACTGCTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS GCA 72 bp | TTCCCAGTCCAAAAAGGTATCCACTCAGGAAGGAGGTaGCAACTAGCTGGGCACAGACAGTGGGATTCATAC | + |
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Preference number: 6 (lower is better) Translates to: FPVQKGIHSGRR*QLAGHRQWDSY Trigger: GTATGAATCCCACTGTCTGTGCCCAGCTAGTTGGCACCTCCTTCCTGAGTGGATACCTTTTTGGACTGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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| CDS TCA 72 bp | GGATTTCATGGGAGCTGCAGAATGAGAGACGAAAAATaGCTAGAGTCATTCCCAGTCCAAAAAGGTATCCAC | + |
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Preference number: 6 (lower is better) Translates to: GFHGSCRMRDEK*LESFPVQKGIH Trigger: GTGGATACCTTTTTGGACTGGGAATGACTCTAGTCATTTTTCGTCTCTCATTCTGCAGCTCCCATGAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061990.5 ENSMUST00000214725.2 |
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