Pregenerated sensors for OLFR418 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049605Ensembl transcript IDs: ENSMUST00000059754.3, ENSMUST00000213420.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCTGGAGAGATGACTCAGCAGTTAAGAGCACTGAGTGCTCTTTaGGAGGTCCTGAGTTCAATCCCCAGCAACCACCATGGTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: RAGEMTQQLRALSAL*EVLSSIPSNHHGVS Trigger: TGAGACACCATGGTGGTTGCTGGGGATTGAACTCAGGACCTCTCAAAGAGCACTCAGTGCTCTTAACTGCTGAGTCATCTCTCCAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR TCA 90 bp | TGTCATACAAGTGTGAAAACTAAAGTTCAATCCCTAGGACCCCTGTaGAGGTTGGGAGGAGAAGGTAGCCCACCTGTAATTCCATCTTCA | + |
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Preference number: 1 (lower is better) Translates to: CHTSVKTKVQSLGPL*RLGGEGSPPVIPSS Trigger: TGAAGATGGAATTACAGGTGGGCTACCTTCTCCTCCCAACCTTCACAGGGGTCCTAGGGATTGAACTTTAGTTTTCACACTTGTATGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 90 bp | GATACCATGCAGTATCAGTGGGTAACATGTACAATAGGGATACAGTaGAGGAAGAGATGGTTCGTGTTCCCAGTAAGATGGATTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: DTMQYQWVTCTIGIQ*RKRWFVFPVRWIGI Trigger: AATCCCAATCCATCTTACTGGGAACACGAACCATCTCTTCCTCCACTGTATCCCTATTGTACATGTTACCCACTGATACTGCATGGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 90 bp | TCCACCATTTTTGAGCCAAAGTTGAAGGAAGCTTTAATTAAACACTaGCCAGGACCATTCCAGGGTTTCCAGCAAATGGCAATGAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: STIFEPKLKEALIKH*PGPFQGFQQMAMSH Trigger: GTGACTCATTGCCATTTGCTGGAAACCCTGGAATGGTCCTGGCCAGTGTTTAATTAAAGCTTCCTTCAACTTTGGCTCAAAAATGGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 90 bp | TATCAGTGGGTAACATGTACAATAGGGATACAGTGGAGGAAGAGATaGTTCGTGTTCCCAGTAAGATGGATTGGGATTGTACTAGATTTC | + |
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Preference number: 1 (lower is better) Translates to: YQWVTCTIGIQWRKR*FVFPVRWIGIVLDF Trigger: GAAATCTAGTACAATCCCAATCCATCTTACTGGGAACACGAACCATCTCTTCCTCCACTGTATCCCTATTGTACATGTTACCCACTGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR TCA 90 bp | TCCATCACTGTGTTGCTCCTCAGAACATGTGGTGAAGTTCTGAAATaGATGTGGCTAAGTTGCTTAATAACATTGAACATACTGGCGATC | + |
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Preference number: 1 (lower is better) Translates to: SITVLLLRTCGEVLK*MWLSCLITLNILAI Trigger: GATCGCCAGTATGTTCAATGTTATTAAGCAACTTAGCCACATTCATTTCAGAACTTCACCACATGTTCTGAGGAGCAACACAGTGATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR TCA 90 bp | GACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTGTGCTTCCCATGCATTTCCGTTTCCTCATTTGTaGGCTGCATCTGGTCATTAC | + |
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Preference number: 2 (lower is better) Translates to: DQRHRGPRTKLQCASHAFPFPHL*AASGHY Trigger: GTAATGACCAGATGCAGCTCACAAATGAGGAAACGG...AAATGCATGGGAAGCACACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTTCCCCAGAGCAAATGTaGCTAAAGAGACTTGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSSPEQM*LKRLAL Trigger: TAGAGCAAGTCTCTTTAGCCACATTTGCTCTGGGGA...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTTACATGCAGGATATATaGGATGCAACTCCTGTCATT | + |
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Preference number: 2 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSYMQDI*DATPVI Trigger: AATGACAGGAGTTGCATCTCATATATCCTGCATGTA...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTCTTTACAACTTCACATaGACACACACCACAAGTATG | + |
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Preference number: 2 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSLYNFT*THTTSM Trigger: CATACTTGTGGTGTGTGTGCATGTGAAGTTGTAAAG...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CCA 90 bp | TGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGACTCCACCCCAGCAACCACCATaGTGTCTCACAACCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: WLKRLALFISSEFGRETPPQQPP*CLTTIC Trigger: ACAGATGGTTGTGAGACACCATGGTGGTTGCTGGGG...TGGAGTCTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGGCACTGAGTGCTCTTTaGGAGGTCCTGAGTTCAATC | + |
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Preference number: 2 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKALSAL*EVLSSI Trigger: GATTGAACTCAGGACCTCTCAAAGAGCACTCAGTGC...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR GCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGCATCCATCACTGTGTTaGTCCTCAGAACATGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKHPSLC*SSEHVV Trigger: CACCACATGTTCTGAGGAGCAACACAGTGATGGATG...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CAA 90 bp | AAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGTaGAAGGAAGCTTTAATTAAACACTGGCCAGGACCATTCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: KNQKRKTSSTIFEPK*KEALIKHWPGPFQG Trigger: ACCCTGGAATGGTCCTGGCCAGTGTTTAATTAAAGCTTCCTTCAACTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATGGTGATCTTTCAACCCAGCATTCAAATAGGCACCGTACAACCCACTTTTACAATAGGGATACAGTaGAGGAAGAGATGGTTCGTG | + |
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Preference number: 2 (lower is better) Translates to: FMVIFQPSIQIGTVQPTFTIGIQ*RKRWFV Trigger: CACGAACCATCTCTTCCTCCACTGTATCCCTATTGT...AAAAGTGGGTTGTACGGTGCCTATTTGAATGCTGGGTTGAAAGATCACCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGTCCAGCAAATGGCAATaGGTCACATTTTACAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKSSKWQ*VTFYRG Trigger: ACCTCTGTAAAATGTGACTCATTGCCATTTGCTGGA...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGATCCAGACTTACTCATaGACTGGTTCTAGTGAGACT | + |
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Preference number: 2 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKIQTYS*TGSSET Trigger: AGTCTCACTAGAACCAGTCCATGAGTAAGTCTGGAT...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR TCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGCACATCCTGTGTTGTTaGGTAAAACGCAAACAAACA | + |
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Preference number: 2 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKHILCC*VKRKQT Trigger: TGTTTGTTTGCGTTTTACTCAACAACACAGGATGTG...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGCACACACCACAAGTATaGATAAGCTCACATATATCC | + |
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Preference number: 2 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKHTPQV*ISSHIS Trigger: GGATATATGTGAGCTTATCCATACTTGTGGTGTGTG...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR GCA 72 bp | ACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTaGAGTGTGCTTCCCATGCATTTTCAGTGGGATTCT | + |
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Preference number: 3 (lower is better) Translates to: TMTRDTEAPGLS*SVLPMHFQWDS Trigger: AGAATCCCACTGAAAATGCATGGGAAGCACACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR TCA 72 bp | GAGATGACTCAGCAGTTAAGAGCACTGAGTGCTCTTTaGGAGGTCCTGAGTTCAATCCCCAGCAACCACCAT | + |
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Preference number: 3 (lower is better) Translates to: EMTQQLRALSAL*EVLSSIPSNHH Trigger: ATGGTGGTTGCTGGGGATTGAACTCAGGACCTCTCAAAGAGCACTCAGTGCTCTTAACTGCTGAGTCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR TCA 72 bp | AGTGTGAAAACTAAAGTTCAATCCCTAGGACCCCTGTaGAGGTTGGGAGGAGAAGGTAGCCCACCTGTAATT | + |
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Preference number: 3 (lower is better) Translates to: SVKTKVQSLGPL*RLGGEGSPPVI Trigger: AATTACAGGTGGGCTACCTTCTCCTCCCAACCTTCACAGGGGTCCTAGGGATTGAACTTTAGTTTTCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGACTCCAAGCACTGAGTGCTCTTaGAGAGGTCCTGAGTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: WLKRLALFISSEFGRETPSTECS*RGPEFN Trigger: ATTGAACTCAGGACCTCTCAAAGAGCACTCAGTGCT...TGGAGTCTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 72 bp | TTTGAGCCAAAGTTGAAGGAAGCTTTAATTAAACACTaGCCAGGACCATTCCAGGGTTTCCAGCAAATGGCA | + |
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Preference number: 3 (lower is better) Translates to: FEPKLKEALIKH*PGPFQGFQQMA Trigger: TGCCATTTGCTGGAAACCCTGGAATGGTCCTGGCCAGTGTTTAATTAAAGCTTCCTTCAACTTTGGCTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 72 bp | GTAACATGTACAATAGGGATACAGTGGAGGAAGAGATaGTTCGTGTTCCCAGTAAGATGGATTGGGATTGTA | + |
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Preference number: 3 (lower is better) Translates to: VTCTIGIQWRKR*FVFPVRWIGIV Trigger: TACAATCCCAATCCATCTTACTGGGAACACGAACCATCTCTTCCTCCACTGTATCCCTATTGTACATGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 72 bp | TGTGAGCTGCATCTGGTCATTACTCTAGTGGCAACCTaGGGAACCAATAAAAGATACAGCAGAATAGAGATT | + |
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Preference number: 3 (lower is better) Translates to: CELHLVITLVAT*GTNKRYSRIEI Trigger: AATCTCTATTCTGCTGTATCTTTTATTGGTTCCCCAGGTTGCCACTAGAGTAATGACCAGATGCAGCTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 72 bp | ACAGAGGTTAATTATAAAGGCAAACCCATAAGGCCATaGGTTTCTCATCATGTCCAATCAGGGGCAAGCATA | + |
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Preference number: 3 (lower is better) Translates to: TEVNYKGKPIRP*VSHHVQSGASI Trigger: TATGCTTGCCCCTGATTGGACATGATGAGAAACCCATGGCCTTATGGGTTTGCCTTTATAATTAACCTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAAAGTCCTCAAACTTCATGGTGCCGTGATCCTTCAATACTACAGTTCCTCGAGTTGCTTAATAACATaGAACATACTGGCGATCCAG | + |
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Preference number: 3 (lower is better) Translates to: VKVLKLHGAVILQYYSSSSCLIT*NILAIQ Trigger: CTGGATCGCCAGTATGTTCAATGTTATTAAGCAACT...CGAGGAACTGTAGTATTGAAGGATCACGGCACCATGAAGTTTGAGGACTTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CCA 72 bp | CAGTGGAGGAAGAGATGGTTCGTGTTCCCAGTAAGATaGATTGGGATTGTACTAGATTTCATCCTATTACTT | + |
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Preference number: 3 (lower is better) Translates to: QWRKRWFVFPVR*IGIVLDFILLL Trigger: AAGTAATAGGATGAAATCTAGTACAATCCCAATCCATCTTACTGGGAACACGAACCATCTCTTCCTCCACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CAA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGGGAACTCTCAGGTTCTaGTGTAGAAAGATGTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKGTLRF*CRKMFK Trigger: TTTGAACATCTTTCTACACAAGAACCTGAGAGTTCC...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR-3UTR CAA 90 bp | TTTATGGTGATCTTTCAACCCAGCATTCAAATAGGCACCGTACAACCCACTTTTCAGTGGATAAAACACTaGTCATACAAGTGTGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: FMVIFQPSIQIGTVQPTFQWIKH*SYKCEN Trigger: GTTTTCACACTTGTATGACAAGTGTTTTATCCACTG...AAAAGTGGGTTGTACGGTGCCTATTTGAATGCTGGGTTGAAAGATCACCATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR TCA 72 bp | GTGTTGCTCCTCAGAACATGTGGTGAAGTTCTGAAATaGATGTGGCTAAGTTGCTTAATAACATTGAACATA | + |
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Preference number: 3 (lower is better) Translates to: VLLLRTCGEVLK*MWLSCLITLNI Trigger: TATGTTCAATGTTATTAAGCAACTTAGCCACATTCATTTCAGAACTTCACCACATGTTCTGAGGAGCAACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CAA 72 bp | AGAGATGACTCAGCAGTTAAGAGCACTGAGTGCTCTTaGAGAGGTCCTGAGTTCAATCCCCAGCAACCACCA | + |
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Preference number: 4 (lower is better) Translates to: RDDSAVKSTECS*RGPEFNPQQPP Trigger: TGGTGGTTGCTGGGGATTGAACTCAGGACCTCTCAAAGAGCACTCAGTGCTCTTAACTGCTGAGTCATCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR TCA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTGCATCCTTGGTACAATaGCCAATGTATACACTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSASLVQ*PMYTLS Trigger: AGACAGTGTATACATTGGTCATTGTACCAAGGATGC...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR GCA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTTCTGTCACAAAAAGGTaGCCTGAATACAGATGCAAT | + |
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Preference number: 4 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSSVTKR*PEYRCN Trigger: ATTGCATCTGTATTCAGGGCACCTTTTTGTGACAGA...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR GCA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTAAGTTAACTATGTCATaGAGAGTGGTATCAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSKLTMS*RVVSAQ Trigger: CTGTGCTGATACCACTCTGCATGACATAGTTAACTT...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CCA 90 bp | CAAATGTGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGGAACCCCATACTAGCTaGGCACACACCCTCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: QMWLKRLALFISSEFGREEPHTS*AHTLLF Trigger: GAACAAGAGGGTGTGTGCCCAGCTAGTATGGGGTTC...CTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCACATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR TCA 90 bp | GTTAAACCCAAGAATCAGAAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGCACCGTGTAAGTTACTaGGATCAGCTGGTCCTGATC | + |
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Preference number: 4 (lower is better) Translates to: VKPKNQKRKTSSTIFEPKHRVSY*DQLVLI Trigger: GATCAGGACCAGCTGATCTCAGTAACTTACACGGTG...CTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTTCTGATTCTTGGGTTTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CCA 90 bp | AAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGACTCCACCTTTAGCCAAAGAAATGGGTTaGCTTGAACCCACAAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KRLALFISSEFGRETPPLAKEMG*LEPTRL Trigger: CAGCCTTGTGGGTTCAAGCCAACCCATTTCTTTGGC...TAAAGGTGGAGTCTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CCA 90 bp | TGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGACTCCAAGCCAGCCAAAGAAATaGGTTGGCTTGAACCCACAA | + |
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Preference number: 4 (lower is better) Translates to: WLKRLALFISSEFGRETPSQPKK*VGLNPQ Trigger: TTGTGGGTTCAAGCCAACCCATTTCTTTGGCTGGCT...TGGAGTCTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CCA 90 bp | CAAATGTGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGGCTGGCGAGCATCCTTaGTACAATGACCAATGTATA | + |
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Preference number: 4 (lower is better) Translates to: QMWLKRLALFISSEFGREAGEHP*YNDQCI Trigger: TATACATTGGTCATTGTACCAAGGATGCTCGCCAGC...CTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCACATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| 3UTR CAA 72 bp | AAGAGAAAGACCAGTTCCACCATTTTTGAGCCAAAGTaGAAGGAAGCTTTAATTAAACACTGGCCAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: KRKTSSTIFEPK*KEALIKHWPGP Trigger: TGGTCCTGGCCAGTGTTTAATTAAAGCTTCCTTCAACTTTGGCTCAAAAATGGTGGAACTGGTCTTTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR GCA 90 bp | GTTAAAGTCCTCAAACTTCATGGTGCCGTGATCCTTCAATACTACAGTTCCTCGTGCCCTGAATACAGATaGAATTTGAATTATTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VKVLKLHGAVILQYYSSSCPEYR*NLNYCH Trigger: GTGGCAATAATTCAAATTGCATCTGTATTCAGGGCA...CGAGGAACTGTAGTATTGAAGGATCACGGCACCATGAAGTTTGAGGACTTTAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR TCA 90 bp | TTTATGGTGATCTTTCAACCCAGCATTCAAATAGGCACCGTACAACCCACTTTTGTAAATTTGTATTCCTaGAAGCTGGAGAAACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: FMVIFQPSIQIGTVQPTFVNLYS*KLEKPW Trigger: CCAAGGTTTCTCCAGCTTTCAGGAATACAAATTTAC...AAAAGTGGGTTGTACGGTGCCTATTTGAATGCTGGGTTGAAAGATCACCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR TCA 90 bp | CAAATGTGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGTGTATACACTGTCTCTaGAGTGGAAAGCATACTAAG | + |
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Preference number: 4 (lower is better) Translates to: QMWLKRLALFISSEFGRECIHCL*SGKHTK Trigger: CTTAGTATGCTTTCCACTTCAGAGACAGTGTATACA...CTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCACATTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR GCA 90 bp | TGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGACTCCATGCAATTTGAATTATTaGCACAAGCAGCCCAATGTT | + |
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Preference number: 4 (lower is better) Translates to: WLKRLALFISSEFGRETPCNLNY*HKQPNV Trigger: AACATTGGGCTGCTTGTGGCAATAATTCAAATTGCA...TGGAGTCTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR TCA 90 bp | CAAATGTGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGAATACAGATGCAATTTaGATTATTGCCACAAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QMWLKRLALFISSEFGRENTDAI*IIATSS Trigger: GCTGCTTGTGGCAATAATTCAAATTGCATCTGTATT...CTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCACATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CCA 90 bp | TTTATGGTGATCTTTCAACCCAGCATTCAAATAGGCACCGTACAACCCACTTTTTGTATTCCTGAAAGCTaGAGAAACCTTGGAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: FMVIFQPSIQIGTVQPTFCIPES*RNLGKQ Trigger: TTGTTTTCCAAGGTTTCTCCAGCTTTCAGGAATACA...AAAAGTGGGTTGTACGGTGCCTATTTGAATGCTGGGTTGAAAGATCACCATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CAA 90 bp | TCTGGCTTTCACACTATGACCAGAGACACAGAGGCCCCAGGACTAAGCTGCAGTAAGAAATGGGTTGGCTaGAACCCACAAGGCTGGCGA | + |
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Preference number: 5 (lower is better) Translates to: SGFHTMTRDTEAPGLSCSKKWVG*NPQGWR Trigger: TCGCCAGCCTTGTGGGTTCAAGCCAACCCATTTCTT...ACTGCAGCTTAGTCCTGGGGCCTCTGTGTCTCTGGTCATAGTGTGAAAGCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CAA 90 bp | CAAATGTGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGGTATACACCACAGGGTaGAGGAGAGGGGTAAACACC | + |
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Preference number: 5 (lower is better) Translates to: QMWLKRLALFISSEFGREVYTTG*RRGVNT Trigger: GGTGTTTACCCCTCTCCTCAACCCTGTGGTGTATAC...CTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCACATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS TCA 90 bp | TGTCACAGAAATAGTGGGCTACTTCTCTGTCACAAAAAGGTGCCCTaGATACAGATGCAATTTGAATTATTGCCACAAGCAGCCCAATGT | + |
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Preference number: 5 (lower is better) Translates to: CHRNSGLLLCHKKVP*IQMQFELLPQAAQC Trigger: ACATTGGGCTGCTTGTGGCAATAATTCAAATTGCATCTGTATTCAGGGCACCTTTTTGTGACAGAGAAGTAGCCCACTATTTCTGTGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059754.3 ENSMUST00000213420.2 |
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| CDS-3UTR CAA 90 bp | TTTATGGTGATCTTTCAACCCAGCATTCAAATAGGCACCGTACAACCCACTTTTGTAAGCAGAAAGCAGTaGTTGATGGCCAAAGTGATA | + |
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Preference number: 5 (lower is better) Translates to: FMVIFQPSIQIGTVQPTFVSRKQ*LMAKVI Trigger: TATCACTTTGGCCATCAACAACTGCTTTCTGCTTAC...AAAAGTGGGTTGTACGGTGCCTATTTGAATGCTGGGTTGAAAGATCACCATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CAA 90 bp | AAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGACTCCACCTTTAATGCAATTTGAATTATaGCCACAAGCAGCCCAATGT | + |
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Preference number: 5 (lower is better) Translates to: KRLALFISSEFGRETPPLMQFEL*PQAAQC Trigger: ACATTGGGCTGCTTGTGGCAATAATTCAAATTGCAT...TAAAGGTGGAGTCTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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| CDS-3UTR CAA 90 bp | CAAATGTGGCTAAAGAGACTTGCTCTATTTATAAGCTCTGAGTTTGGTAGGGAGGAATACAGATGCAATTaGAATTATTGCCACAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QMWLKRLALFISSEFGREEYRCN*NYCHKQ Trigger: CTGCTTGTGGCAATAATTCAAATTGCATCTGTATTC...CTCCCTACCAAACTCAGAGCTTATAAATAGAGCAAGTCTCTTTAGCCACATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213420.2 |
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