Pregenerated sensors for OLFR417 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066672Ensembl transcript IDs: ENSMUST00000085862.2, ENSMUST00000217962.2, ENSMUST00000220394.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGAAGGGTTGAGGAAGGCACTTAATGTCAGCTTTGGGCCTTCATaGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATAC | + |
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Preference number: 1 (lower is better) Translates to: REGLRKALNVSFGPS*VCPVMCMSTRARPY Trigger: GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCCAAAGCTGACATTAAGTGCCTTCCTCAACCCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR TCA 90 bp | CACCTCAGCAGAGACTTTGCCTCAGTCAATGGACTAGAGAAGGGTTaGGGAAGGCACTTAATGTCAGCTTTGGGCCTTCATGGGTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: HLSRDFASVNGLEKG*GRHLMSALGLHGCV Trigger: GACACACCCATGAAGGCCCAAAGCTGACATTAAGTGCCTTCCTCAACCCTTCTCTAGTCCATTGACTGAGGCAAAGTCTCTGCTGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CCA 90 bp | GGGCAAGCCTGCATCCCAGCACTGAAGATACAGAGAAGGCATCACTaGGCCAATTGTCTAACTAGGCTCTTTGGAACTGGCCATATCTCA | + |
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Preference number: 1 (lower is better) Translates to: GQACIPALKIQRRHH*ANCLTRLFGTGHIS Trigger: TGAGATATGGCCAGTTCCAAAGAGCCTAGTTAGACAATTGGCCCAGTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCAGGCTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR GCA 90 bp | GACTGGAGTTCAAAGTGTAGCACCAAAATAAAAGCTGGGCAAGCCTaGATCCCAGCACTGAAGATACAGAGAAGGCATCACTGGGCCAAT | + |
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Preference number: 1 (lower is better) Translates to: DWSSKCSTKIKAGQA*IPALKIQRRHHWAN Trigger: ATTGGCCCAGTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCAGGCTTGCCCAGCTTTTATTTTGGTGCTACACTTTGAACTCCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR TCA 90 bp | ATGACTCAACAATTAAGGACCCCTGCTCAGTTCCCAGCACCCACATaGAGCAGTTCACAAGTGCCTATAACTCCAGCTCCAGTTATTGGA | + |
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Preference number: 1 (lower is better) Translates to: MTQQLRTPAQFPAPT*SSSQVPITPAPVIG Trigger: TCCAATAACTGGAGCTGGAGTTATAGGCACTTGTGAACTGCTTCATGTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGTTGAGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CCA 90 bp | CAAATTTATCAGTTGATAGCACATTCCCTGAACAAGCACAAGGACTaGAGTTCAAAGTGTAGCACCAAAATAAAAGCTGGGCAAGCCTGC | + |
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Preference number: 1 (lower is better) Translates to: QIYQLIAHSLNKHKD*SSKCSTKIKAGQAC Trigger: GCAGGCTTGCCCAGCTTTTATTTTGGTGCTACACTTTGAACTCCAGTCCTTGTGCTTGTTCAGGGAATGTGCTATCAACTGATAAATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CCA 90 bp | ACTGGATTTAGTGGACTATCAAGAAAGGAAGATGGGAGAGAGTCTTaGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGATAGA | + |
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Preference number: 1 (lower is better) Translates to: TGFSGLSRKEDGRES*DLCVGSWKIEMEDR Trigger: TCTATCTTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATCTTCCTTTCTTGATAGTCCACTAAATCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CCA 90 bp | AGAAAGGAAGATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGATAGAAACAACTATACTCCATTGCAT | + |
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Preference number: 1 (lower is better) Translates to: RKEDGRESWDLCVGS*KIEMEDRNNYTPLH Trigger: ATGCAATGGAGTATAGTTGTTTCTATCTTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATCTTCCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR TCA 90 bp | GATGGGAAGAATTCTTTAAATTTCTGCATTATGGACATTATATGGTaGTCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: DGKNSLNFCIMDIIW*SQSLSHTCTRSRQS Trigger: GGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGATCACCATATAATGTCCATAATGCAGAAATTTAAAGAATTCTTCCCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR TCA 90 bp | ATATTCACACCTAATACAGGCATCCATGAGATCATGCTCATTTTCTaGATGCTCAGATCATCATTAAGAAAGAGACAAAGGATGCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: IFTPNTGIHEIMLIF*MLRSSLRKRQRMQN Trigger: GTTTTGCATCCTTTGTCTCTTTCTTAATGATGATCTGAGCATTCAGAAAATGAGCATGATCTCATGGATGCCTGTATTAGGTGTGAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR TCA 90 bp | GATCCATTTTCCCTTTCTTATATTGTTTCAGTACCTTCTCATCTGTaGATAATTATTTCTCGGTTAGAAAGTAGGTTTCTGCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: DPFSLSYIVSVPSHL*IIISRLESRFLLSL Trigger: GAGAGAGAGCAGAAACCTACTTTCTAACCGAGAAATAATTATTCACAGATGAGAAGGTACTGAAACAATATAAGAAAGGGAAAATGGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCAAACACAGGTGTGGTaGTGCAAGCCTGTCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYQTQVW*CKPVIL Trigger: CAGGATGACAGGCTTGCACCACCACACCTGTGTTTG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACAAGCACTCAGAAGGCTaGAGCAGGAGAGTTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYKHSEG*SRRVEC Trigger: ACATTCAACTCTCCTGCTTCAGCCTTCTGAGTGCTT...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTCATTGTCTCACACCTaGACAAGATCAAGGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYSLSHT*TRSRQS Trigger: GGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTTAGTTTCTCACTTGTaGGTTATGCAGGAGATGCAG | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYLVSHL*VMQEMQ Trigger: CTGCATCTCCTGCATAACTCACAAGTGAGAAACTAA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCATCTTTTGGGTGTATaGTCACGAGTGGTATATCTG | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYHLLGV*SRVVYL Trigger: CAGATATACCACTCGTGAGCATACACCCAAAAGATG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACGCTTCTTTTGGTTTGTaGATGATAGCATGGTTATCC | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYASFGL*MIAWLS Trigger: GGATAACCATGCTATCATCCACAAACCAAAAGAAGC...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYLCVGS*KIEMED Trigger: ATCTTCCATTTCTATCTTCCAACTCCCCACACATAG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACAAAGAATGCAGGAACTaGATGATGGGAAGAATTCTT | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYKECRN*MMGRIL Trigger: AAGAATTCTTCCCATCATTCAGTTCCTGCATTCTTT...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCACGAGTGGTATATCTaGGTCTTAAGAAAAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYHEWYI*VLRKVK Trigger: TTTCACTTTTCTTAAGACCCAGATATACCACTCGTG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTTGGTTTATCTCACTTaGGATGTGTTCTCCTACTTT | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYLVYLT*DVFSYF Trigger: AAAGTAGGAGAACACATCCCAAGTGAGATAAACCAA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CAA 90 bp | TCACCTCAGCAGAGACTTTGCCTCAGTCAATGGACTAGAGAAGGGTaGAGGAAGGCACTTAATGTCAGCTTTGGGCCTTCATGGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SPQQRLCLSQWTREG*RKALNVSFGPSWVC Trigger: ACACACCCATGAAGGCCCAAAGCTGACATTAAGTGCCTTCCTCAACCCTTCTCTAGTCCATTGACTGAGGCAAAGTCTCTGCTGAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACGCAATAAATAGCTTCTaGAAAAGGGAAAATTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GPSWVCPVMCMSTRARPYAINSF*KRENSF Trigger: GAAGGAATTTTCCCTTTTCCAGAAGCTATTTATTGC...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAATGCAAACACAGGTGTaGTGGTGCAAGCCTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMEMQTQV*WCKPVI Trigger: GATGACAGGCTTGCACCACCACACCTGTGTTTGCAT...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGCCATTCTACAGAGGTaGTGTAACCAGTTCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMEAILQR*CNQFSS Trigger: ACTGGAGAACTGGTTACATCACCTCTGTAGAATGGC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCATGTCCTTCCCAACATTaGTCTCTCCTGTTCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: ITIIVSHLHKIKAVQIPACPSQH*SLLFLS Trigger: GGATAGGAACAGGAGAGATCAATGTTGGGAAGGACA...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTTCCCAGCACCCACATaGAGCAGTTCACAAGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: YKKHFEMQTQVWWCKPVIFPAPT*SSSQVP Trigger: AGGCACTTGTGAACTGCTTCATGTGGGTGCTGGGAA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR GCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCACAATTAAGGACCCCTaGTCAGTTCCCAGCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: YKKHFEMQTQVWWCKPVITIKDP*SVPSTH Trigger: GTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGT...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR GCA 90 bp | ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCACTGGTATATTTTCCATaGTCCAGGGGGAATACCCAT | + |
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Preference number: 2 (lower is better) Translates to: ITIIVSHLHKIKAVQIPALVYFP*SRGNTH Trigger: ATGGGTATTCCCCCTGGAGCATGGAAAATATACCAG...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTGTCCTTCCCAACATTaGTCTCTCCTGTTCCTATCC | + |
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Preference number: 2 (lower is better) Translates to: YKKHFEMQTQVWWCKPVICPSQH*SLLFLS Trigger: GGATAGGAACAGGAGAGATCAATGTTGGGAAGGACA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAACAATTAAGGACCCCTaGTCAGTTCCCAGCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINITIKDP*SVPSTH Trigger: GTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATACAAACACAGGTGTGGTaGTGCAAGCCTGTCATCCTG | + |
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Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINIQTQVW*CKPVIL Trigger: CAGGATGACAGGCTTGCACCACCACACCTGTGTTTG...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CAA 90 bp | GGGGGTCAGGATTTATTATCCTCCACAATTGAGAACTGGCTTATTTaGCCTCCACATTCCTCATTCTTAGGCATCTTAGGGTTACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGQDLLSSTIENWLI*PPHSSFLGILGLLS Trigger: TGAGAGTAACCCTAAGATGCCTAAGAATGAGGAATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGAGGATAATAAATCCTGACCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCTCACTTGTGAGTTATGCAGGAGATGCAGAAATTAATTGGAAGAAGCCCAACCTAGAAAATGCCTaGAGAAGCTCCGGTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: SFSLVSYAGDAEINWKKPNLENA*RSSGET Trigger: GGTTTCACCGGAGCTTCTTCAGGCATTTTCTAGGTT...GGGCTTCTTCCAATTAATTTCTGCATCTCCTGCATAACTCACAAGTGAGAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGCATCCATGAGATCATaGTCATTTTCTGAATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMEASMRS*SFSECS Trigger: TGAGCATTCAGAAAATGAGCATGATCTCATGGATGC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATCACTCAGCTTCTTTTaGTTTGTGGATGATAGCATG | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMESLSFF*FVDDSM Trigger: CATGCTATCATCCACAAACCAAAAGAAGCTGAGTGA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATCCACAATTGAGAACTaGCTTATTTTGCCTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMESTIEN*LILPPH Trigger: ATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAAACCCAGCCATGAGATaGCTGTTATTTTCAAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMENPAMR*LLFSKL Trigger: CAACTTTGAAAATAACAGCCATCTCATGGCTGGGTT...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCACTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ITIIVSHLHKIKAVQIPALCVGS*KIEMED Trigger: ATCTTCCATTTCTATCTTCCAACTCCCCACACATAG...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCGCCATTCTACAGAGGTaGTGTAACCAGTTCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: QFLAIMNKAAMNKVEQVSAILQR*CNQFSS Trigger: ACTGGAGAACTGGTTACATCACCTCTGTAGAATGGC...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGAGAAATTGCCATGTTaGTTTTCAAACACACCTGTT | + |
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Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMEEKLPC*FSNTPV Trigger: AACAGGTGTGTTTGAAAATCAACATGGCAATTTCTC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCAGGGCCTGCCTGGACTaGACAGTAAGTACTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ECISKCYTLLNMYSHLQPRACLD*TVSTRS Trigger: TGACCTAGTACTTACTGTTCAGTCCAGGCAGGCCCT...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAAAGCACTCAGAAGGCTaGAGCAGGAGAGTTGAATGT | + |
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Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINIKHSEG*SRRVEC Trigger: ACATTCAACTCTCCTGCTTCAGCCTTCTGAGTGCTT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGATGCAGAAATTAATTaGAAGAAGCCCCATATCATC | + |
|
Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMEDAEIN*KKPHII Trigger: GATGATATGGGGCTTCTTCCAATTAATTTCTGCATC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAACACGAGTGGTATATCTaGGTCTTAAGAAAAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: DGRESWDLCVGSWKIEMEHEWYI*VLRKVK Trigger: TTTCACTTTTCTTAAGACCCAGATATACCACTCGTG...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGGGATGGAACATCTTTTaGGTGTATGCTCACGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLGWNIF*VYAHEW Trigger: CCACTCGTGAGCATACACCCAAAAGATGTTCCATCC...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGAACCTAGAAAATGCCTaGAGAAGCTCCGGTGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: MQKLIGRSPISSEEREMKNLENA*RSSGET Trigger: GGTTTCACCGGAGCTTCTTCAGGCATTTTCTAGGTT...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGCTTATGGCAAAGTCTTaGCATTGTCAGAAGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLLMAKS*HCQKRP Trigger: TGGCCTCTTCTGACAATGGCAAGACTTTGCCATAAG...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTCCACAATTGAGAACTaGCTTATTTTGCCTCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: YKKHFEMQTQVWWCKPVISTIEN*LILPPH Trigger: ATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CAA 90 bp | GTGAGCACATACTGTGTTTGTCTTTCTGAGTTTGGTTTATCTCACTaGGGATGTGTTCTCCTACTTTCAACCATTTGCCAGCAAATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VSTYCVCLSEFGLSH*GCVLLLSTICQQIS Trigger: TGAAATTTGCTGGCAAATGGTTGAAAGTAGGAGAACACATCCCAAGTGAGATAAACCAAACTCAGAAAGACAAACACAGTATGTGCTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATACATCTTTTGGGTGTATaGTCACGAGTGGTATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINIHLLGV*SRVVYL Trigger: CAGATATACCACTCGTGAGCATACACCCAAAAGATG...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGGTCCTTGTGGTAGGATaGAACATCTTTTGGGTGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLVLVVG*NIFWVY Trigger: ATACACCCAAAAGATGTTCCATCCTACCACAAGGAC...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CAA 90 bp | ATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGTATTaGAATAACTTCCTGAGCAAACCTAGAAAATGCCTGAAGAAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: IGRSPISSEEREMKY*NNFLSKPRKCLKKL Trigger: GAGCTTCTTCAGGCATTTTCTAGGTTTGCTCAGGAAGTTATTCAAATACTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR GCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAAGAAGCATTTTGAAATaGAAACACAGGTGTGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINIRSILK*KHRCGG Trigger: ACCACCACACCTGTGTTTGCATTTCAAAATGCTTCT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGTCACTCAGCTTCTTTTaGTTTGTGGATGATAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLSLSFF*FVDDSM Trigger: CATGCTATCATCCACAAACCAAAAGAAGCTGAGTGA...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGATGCAGAAATTAATTaGAAGAAGCCCCATATCATC | + |
|
Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINIDAEIN*KKPHII Trigger: GATGATATGGGGCTTCTTCCAATTAATTTCTGCATC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGTTGTGGATGATAGCATaGTTATCCTTTACTTTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLLWMIA*LSFTLG Trigger: CCCTAAAGTAAAGGATAACCATGCTATCATCCACAA...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CAA 90 bp | GGGAGTTGGAAGATAGAAATGGAAGATAGAAACAACTATACTCCATaGCATGCATATATGCAATTTCCAAAAACTATGGAAAAGTACCCC | + |
|
Preference number: 2 (lower is better) Translates to: GSWKIEMEDRNNYTP*HAYMQFPKTMEKYP Trigger: GGGGTACTTTTCCATAGTTTTTGGAAATTGCATATATGCATGCAATGGAGTATAGTTGTTTCTATCTTCCATTTCTATCTTCCAACTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAACACTCTTCATAATTTaGGGGGTCAGGATTTATTAT | + |
|
Preference number: 2 (lower is better) Translates to: HLQPSHEMAVIFKVVINITLFII*GVRIYY Trigger: ATAATAAATCCTGACCCCCCAAATTATGAAGAGTGT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR GCA 72 bp | GTCAGCTTTGGGCCTTCATGGGTGTGTCCAGTCATGTaGATGTCCACTCGTGCCCGCCCATACATATACGTG | + |
|
Preference number: 3 (lower is better) Translates to: VSFGPSWVCPVM*MSTRARPYIYV Trigger: CACGTATATGTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCCAAAGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCTCCAGCTCCAGTTATaGGATCCCACATCTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPSWVCPVMCMSTRARPYLQLQL*DPTSYS Trigger: TGAATAAGATGTGGGATCCAATAACTGGAGCTGGAG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTCTATGTGTGGGGAGTaGGAAGATAGAAATGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GPSWVCPVMCMSTRARPYSMCGE*EDRNGR Trigger: TCTTCCATTTCTATCTTCCAACTCCCCACACATAGA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR TCA 72 bp | CAATTAAGGACCCCTGCTCAGTTCCCAGCACCCACATaGAGCAGTTCACAAGTGCCTATAACTCCAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QLRTPAQFPAPT*SSSQVPITPAP Trigger: TGGAGCTGGAGTTATAGGCACTTGTGAACTGCTTCATGTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CCA 72 bp | TGCATCCCAGCACTGAAGATACAGAGAAGGCATCACTaGGCCAATTGTCTAACTAGGCTCTTTGGAACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: CIPALKIQRRHH*ANCLTRLFGTG Trigger: GCCAGTTCCAAAGAGCCTAGTTAGACAATTGGCCCAGTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR GCA 72 bp | AAGAACAGGAGAGATGACTCAACAATTAAGGACCCCTaGTCAGTTCCCAGCACCCACATGAAGCAGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: KNRRDDSTIKDP*SVPSTHMKQFT Trigger: TGTGAACTGCTTCATGTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGTTGAGTCATCTCTCCTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR GCA 72 bp | TCAAAGTGTAGCACCAAAATAAAAGCTGGGCAAGCCTaGATCCCAGCACTGAAGATACAGAGAAGGCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: SKCSTKIKAGQA*IPALKIQRRHH Trigger: GTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCAGGCTTGCCCAGCTTTTATTTTGGTGCTACACTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CCA 72 bp | CATATCTCACCTCAGCAGAGACTTTGCCTCAGTCAATaGACTAGAGAAGGGTTGAGGAAGGCACTTAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: HISPQQRLCLSQ*TREGLRKALNV Trigger: GACATTAAGTGCCTTCCTCAACCCTTCTCTAGTCCATTGACTGAGGCAAAGTCTCTGCTGAGGTGAGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAACTCCAGCTCCAGTTATaGGATCCCACATCTTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: DGRESWDLCVGSWKIEMELQLQL*DPTSYS Trigger: TGAATAAGATGTGGGATCCAATAACTGGAGCTGGAG...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR TCA 72 bp | GCAGGAGAGTTGAATGTATTCAGGGCCTGCCTGGACTaGACAGTAAGTACTAGGTCAGCATTGGTTAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: AGELNVFRACLD*TVSTRSALVKV Trigger: TACTTTAACCAATGCTGACCTAGTACTTACTGTTCAGTCCAGGCAGGCCCTGAATACATTCAACTCTCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CCA 72 bp | GGGGGTCAGGATTTATTATCCTCCACAATTGAGAACTaGCTTATTTTGCCTCCACATTCCTCATTCTTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GGQDLLSSTIEN*LILPPHSSFLG Trigger: GCCTAAGAATGAGGAATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGAGGATAATAAATCCTGACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATTTGGTTTATCTCACTaGGGATGTGTTCTCCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: DGRESWDLCVGSWKIEMEFGLSH*GCVLLL Trigger: AAGTAGGAGAACACATCCCAAGTGAGATAAACCAAA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATTTGTCTTTCTGAGTTaGGTTTATCTCACTTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: DGRESWDLCVGSWKIEMEFVFLS*VYLTWD Trigger: ATCCCAAGTGAGATAAACCAAACTCAGAAAGACAAA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCGCTGAAGCAGGAGAGTaGAATGTATTCAGGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ECISKCYTLLNMYSHLQPAEAGE*NVFRAC Trigger: GCAGGCCCTGAATACATTCAACTCTCCTGCTTCAGC...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR CCA 72 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGATAGAAACAACTATACT | + |
|
Preference number: 3 (lower is better) Translates to: DGRESWDLCVGS*KIEMEDRNNYT Trigger: AGTATAGTTGTTTCTATCTTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTCAGCTTCTTTTGGTTaGTGGATGATAGCATGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: YKKHFEMQTQVWWCKPVISASFG*WMIAWL Trigger: TAACCATGCTATCATCCACAAACCAAAAGAAGCTGA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATATTTGGTTTATCTCACTaGGGATGTGTTCTCCTACTT | + |
|
Preference number: 3 (lower is better) Translates to: HLQPSHEMAVIFKVVINIFGLSH*GCVLLL Trigger: AAGTAGGAGAACACATCCCAAGTGAGATAAACCAAA...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGTCAGCTTCTTTTGGTTaGTGGATGATAGCATGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLSASFG*WMIAWL Trigger: TAACCATGCTATCATCCACAAACCAAAAGAAGCTGA...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR TCA 72 bp | CCTAATACAGGCATCCATGAGATCATGCTCATTTTCTaGATGCTCAGATCATCATTAAGAAAGAGACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PNTGIHEIMLIF*MLRSSLRKRQR Trigger: CCTTTGTCTCTTTCTTAATGATGATCTGAGCATTCAGAAAATGAGCATGATCTCATGGATGCCTGTATTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCTATTATCCTCCACAATaGAGAACTGGCTTATTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ECISKCYTLLNMYSHLQPYYPPQ*RTGLFC Trigger: GCAAAATAAGCCAGTTCTCAATTGTGGAGGATAATA...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| 3UTR TCA 72 bp | CAAAGTTATGTTTCCTGTCTCACAAGTCAAAACATTTaGCAAGTAGTATTTATGGAGTCTACATTTCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QSYVSCLTSQNI*QVVFMESTFPQ Trigger: TTGGGGAAATGTAGACTCCATAAATACTACTTGTCAAATGTTTTGACTTGTGAGACAGGAAACATAACTTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR TCA 90 bp | GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCGTAAGTCAGAAGGATaGGCAAGAATGTACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPSWVCPVMCMSTRARPYRKSEG*ARMYPA Trigger: TGCTGGGTACATTCTTGCTCATCCTTCTGACTTACG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR GCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGGACAGCCTCAGAACTaGCCTCATATGGCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DGRESWDLCVGSWKIEMEGQPQN*PHMAEE Trigger: TTCTTCTGCCATATGAGGGCAGTTCTGAGGCTGTCC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR GCA 90 bp | ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCAGACGGTATATGGAACTaGTATGAGTGTGTCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITIIVSHLHKIKAVQIPADGIWN*YECVIS Trigger: GGAGATGACACACTCATAGCAGTTCCATATACCGTC...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAAAGTACATAGGAGTGTaGAGAGATCTGTCCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DGRESWDLCVGSWKIEMEKYIGV*RDLSTQ Trigger: TTGGGTGGACAGATCTCTCCACACTCCTATGTACTT...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR GCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCAGGAAGAAACACATCTaGAAGCCACAGCCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: YKKHFEMQTQVWWCKPVIRKKHI*KPQPVT Trigger: AGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCT...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR CCA 90 bp | GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGGTAATGACGGTATATaGAACTGCTATGAGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DGRESWDLCVGSWKIEMEGNDGI*NCYECV Trigger: GACACACTCATAGCAGTTCCATATACCGTCATTACC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR TCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCGGACAGAAGAAAGGATaGACACGTAAGTCAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKKHFEMQTQVWWCKPVIGQKKG*TRKSEG Trigger: TCCTTCTGACTTACGTGTTCATCCTTTCTTCTGTCC...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTCTCACTTGTGAGTTATGCAGGAGATGCAGAAATTAATTGGAAGAAGCCCTATATGGAACTGCTATaGGTGTGTCATCTCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSLVSYAGDAEINWKKPYMELL*VCHLLR Trigger: CCGGAGGAGATGACACACTCATAGCAGTTCCATATA...GGGCTTCTTCCAATTAATTTCTGCATCTCCTGCATAACTCACAAGTGAGAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR TCA 90 bp | CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCTATATGGAACTGCTATaGGTGTGTCATCTCCTCCGG | + |
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Preference number: 4 (lower is better) Translates to: QFLAIMNKAAMNKVEQVSYMELL*VCHLLR Trigger: CCGGAGGAGATGACACACTCATAGCAGTTCCATATA...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR GCA 90 bp | CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCAGGAAGAAACACATCTaGAAGCCACAGCCTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: QFLAIMNKAAMNKVEQVSRKKHI*KPQPVT Trigger: AGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCT...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR GCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGGCACAGGTGGAAAATaGCTTTTGTTTACCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: HLQPSHEMAVIFKVVINIGTGGK*LLFTLS Trigger: GCTGAGGGTAAACAAAAGGCATTTTCCACCTGTGCC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | AGTTTCTCACTTGTGAGTTATGCAGGAGATGCAGAAATTAATTGGAAGAAGCCCAAGTACATAGGAGTGTaGAGAGATCTGTCCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFSLVSYAGDAEINWKKPKYIGV*RDLSTQ Trigger: TTGGGTGGACAGATCTCTCCACACTCCTATGTACTT...GGGCTTCTTCCAATTAATTTCTGCATCTCCTGCATAACTCACAAGTGAGAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR GCA 90 bp | ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGGGCACAGGTGGAAAATaGCTTTTGTTTACCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: MQKLIGRSPISSEEREMKGTGGK*LLFTLS Trigger: GCTGAGGGTAAACAAAAGGCATTTTCCACCTGTGCC...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTCCTCCGGAGTTTTCTaGCTTCATATAAACAACAGA | + |
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Preference number: 4 (lower is better) Translates to: YKKHFEMQTQVWWCKPVISSGVF*LHINNR Trigger: TCTGTTGTTTATATGAAGCCAGAAAACTCCGGAGGA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGATTGGACTGAGGAATaGGGTAATGACGGTATATGG | + |
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Preference number: 4 (lower is better) Translates to: HLQPSHEMAVIFKVVINIDWTEE*GNDGIW Trigger: CCATATACCGTCATTACCCCATTCCTCAGTCCAATC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR TCA 90 bp | TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGCATACCCCATCAAAGTaGGAAGGATACAGTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SLHNYEKHKTAVIHVGQLHTPSK*EGYSLF Trigger: GAACAAACTGTATCCTTCTCACTTTGATGGGGTATG...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR TCA 90 bp | ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGGGACAGAAGAAAGGATaGACACGTAAGTCAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: MQKLIGRSPISSEEREMKGQKKG*TRKSEG Trigger: TCCTTCTGACTTACGTGTTCATCCTTTCTTCTGTCC...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGGTAATGACGGTATATaGAACTGCTATGAGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HLQPSHEMAVIFKVVINIGNDGI*NCYECV Trigger: GACACACTCATAGCAGTTCCATATACCGTCATTACC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CAA 72 bp | AAGAAGTCCCATCCTTTTCACTCAGCTTCTTTTGGTTaGTGGATGATAGCATGGTTATCCTTTACTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: KKSHPFHSASFG*WMIAWLSFTLG Trigger: CCCTAAAGTAAAGGATAACCATGCTATCATCCACAAACCAAAAGAAGCTGAGTGAAAAGGATGGGACTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR TCA 90 bp | ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGCATACCCCATCAAAGTaGGAAGGATACAGTTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: MQKLIGRSPISSEEREMKHTPSK*EGYSLF Trigger: GAACAAACTGTATCCTTCTCACTTTGATGGGGTATG...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGTCCACATGCAACATTaGTCATTAGAAGAGGATATC | + |
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Preference number: 4 (lower is better) Translates to: HLQPSHEMAVIFKVVINIVHMQH*SLEEDI Trigger: GATATCCTCTTCTAATGACCAATGTTGCATGTGGAC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCGATTGGACTGAGGAATaGGGTAATGACGGTATATGG | + |
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Preference number: 4 (lower is better) Translates to: ECISKCYTLLNMYSHLQPDWTEE*GNDGIW Trigger: CCATATACCGTCATTACCCCATTCCTCAGTCCAATC...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CCA 90 bp | GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCGTCCACATGCAACATTaGTCATTAGAAGAGGATATC | + |
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Preference number: 4 (lower is better) Translates to: ECISKCYTLLNMYSHLQPVHMQH*SLEEDI Trigger: GATATCCTCTTCTAATGACCAATGTTGCATGTGGAC...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| 3UTR CAA 72 bp | ACAAAGTTATGTTTCCTGTCTCACAAGTCAAAACATTaGACAAGTAGTATTTATGGAGTCTACATTTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TKLCFLSHKSKH*TSSIYGVYISP Trigger: TGGGGAAATGTAGACTCCATAAATACTACTTGTCAAATGTTTTGACTTGTGAGACAGGAAACATAACTTTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS TCA 90 bp | TCCAAGGCCCAGGAAGAAACACATCTGCAAGCCACAGCCTGTGACTaGAATGCGGCTGTCCTTGTCTATCAGATCCACCAGCATCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SKAQEETHLQATACD*NAAVLVYQIHQHLG Trigger: CCCAAGATGCTGGTGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCTGGGCCTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS TCA 90 bp | TTCCTCCAAGGCCCAGGAAGAAACACATCTGCAAGCCACAGCCTGTaGCTGAAATGCGGCTGTCCTTGTCTATCAGATCCACCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: FLQGPGRNTSASHSL*LKCGCPCLSDPPAS Trigger: AGATGCTGGTGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCTGGGCCTTGGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CAA 90 bp | TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCGAAATGCGGCTGTCCTaGTCTATCAGATCCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: YKKHFEMQTQVWWCKPVIEMRLS*SIRSTS Trigger: GCTGGTGGATCTGATAGACAAGGACAGCCGCATTTC...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS CCA 90 bp | GAGTGTGAATATGATTGGACTGAGGAATGGGGTAATGACGGTATATaGAACTGCTATGAGTGTGTCATCTCCTCCGGAGTTTTCTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: ECEYDWTEEWGNDGI*NCYECVISSGVFWL Trigger: AAGCCAGAAAACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATATTCACACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CAA 90 bp | CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGAAATGCGGCTGTCCTaGTCTATCAGATCCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: HLQPSHEMAVIFKVVINIEMRLS*SIRSTS Trigger: GCTGGTGGATCTGATAGACAAGGACAGCCGCATTTC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS TCA 90 bp | GCAAAGGAAGACCACAAAGAGCCAGGTCTGTACAAGTGGGTAAGCTaGGAAGCCTATGAGAATGAATTCTTTCAGGATTGTTTGGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: AKEDHKEPGLYKWVS*EAYENEFFQDCLVD Trigger: ATCAACCAAACAATCCTGAAAGAATTCATTCTCATAGGCTTCTCAGCTTACCCACTTGTACAGACCTGGCTCTTTGTGGTCTTCCTTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS GCA 90 bp | GAATATGATTGGACTGAGGAATGGGGTAATGACGGTATATGGAACTaGTATGAGTGTGTCATCTCCTCCGGAGTTTTCTGGCTTCATATA | + |
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Preference number: 5 (lower is better) Translates to: EYDWTEEWGNDGIWN*YECVISSGVFWLHI Trigger: TATATGAAGCCAGAAAACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS-3UTR CAA 90 bp | CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCAGCAGAGGCCACAAGTaGTCCACATGCAACATTGGT | + |
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Preference number: 5 (lower is better) Translates to: QFLAIMNKAAMNKVEQVSSRGHK*STCNIG Trigger: ACCAATGTTGCATGTGGACAACTTGTGGCCTCTGCT...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS TCA 90 bp | GTAAGTCAGAAGGATGAGCAAGAATGTACCCAGCAAACCAGACACTaGCATCAGTGTTACAATGAATTCTGTGAAGTTACTGTCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: VSQKDEQECTQQTRH*HQCYNEFCEVTVCA Trigger: TGCACAGACAGTAACTTCACAGAATTCATTGTAACACTGATGTCAGTGTCTGGTTTGCTGGGTACATTCTTGCTCATCCTTCTGACTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS TCA 72 bp | GGCCCAGGAAGAAACACATCTGCAAGCCACAGCCTGTaGCTGAAATGCGGCTGTCCTTGTCTATCAGATCCA | + |
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Preference number: 6 (lower is better) Translates to: GPGRNTSASHSL*LKCGCPCLSDP Trigger: TGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS CAA 90 bp | GTGTGGAGAGATCTGTCCACCCAAGTTAAACCCATGATGGCCAGGTaGCCTGCAAGAGTGACCATATACAGGCAAAGGAAGACCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: VWRDLSTQVKPMMAR*PARVTIYRQRKTTK Trigger: CTTTGTGGTCTTCCTTTGCCTGTATATGGTCACTCTTGCAGGCAACCTGGCCATCATGGGTTTAACTTGGGTGGACAGATCTCTCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS CAA 72 bp | GATCTGTCCACCCAAGTTAAACCCATGATGGCCAGGTaGCCTGCAAGAGTGACCATATACAGGCAAAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: DLSTQVKPMMAR*PARVTIYRQRK Trigger: CTTCCTTTGCCTGTATATGGTCACTCTTGCAGGCAACCTGGCCATCATGGGTTTAACTTGGGTGGACAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS GCA 72 bp | TGGACTGAGGAATGGGGTAATGACGGTATATGGAACTaGTATGAGTGTGTCATCTCCTCCGGAGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WTEEWGNDGIWN*YECVISSGVFW Trigger: CCAGAAAACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS CCA 72 bp | TATGATTGGACTGAGGAATGGGGTAATGACGGTATATaGAACTGCTATGAGTGTGTCATCTCCTCCGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: YDWTEEWGNDGI*NCYECVISSGV Trigger: AACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS TCA 72 bp | GACCACAAAGAGCCAGGTCTGTACAAGTGGGTAAGCTaGGAAGCCTATGAGAATGAATTCTTTCAGGATTGT | + |
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Preference number: 6 (lower is better) Translates to: DHKEPGLYKWVS*EAYENEFFQDC Trigger: ACAATCCTGAAAGAATTCATTCTCATAGGCTTCTCAGCTTACCCACTTGTACAGACCTGGCTCTTTGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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| CDS CCA 72 bp | ATTCTTCATATCCTTATTCCTGAGTGTGAATATGATTaGACTGAGGAATGGGGTAATGACGGTATATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ILHILIPECEYD*TEEWGNDGIWN Trigger: GTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATATTCACACTCAGGAATAAGGATATGAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085862.2 ENSMUST00000217962.2 ENSMUST00000220394.2 |
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