RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for OLFR417 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066672

Ensembl transcript IDs: ENSMUST00000085862.2, ENSMUST00000217962.2, ENSMUST00000220394.2

Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGAAGGGTTGAGGAAGGCACTTAATGTCAGCTTTGGGCCTTCATaGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATAC +
Preference number: 1 (lower is better)
Translates to: REGLRKALNVSFGPS*VCPVMCMSTRARPY
Trigger: GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCCAAAGCTGACATTAAGTGCCTTCCTCAACCCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 90 bp CACCTCAGCAGAGACTTTGCCTCAGTCAATGGACTAGAGAAGGGTTaGGGAAGGCACTTAATGTCAGCTTTGGGCCTTCATGGGTGTGTC +
Preference number: 1 (lower is better)
Translates to: HLSRDFASVNGLEKG*GRHLMSALGLHGCV
Trigger: GACACACCCATGAAGGCCCAAAGCTGACATTAAGTGCCTTCCTCAACCCTTCTCTAGTCCATTGACTGAGGCAAAGTCTCTGCTGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 90 bp GGGCAAGCCTGCATCCCAGCACTGAAGATACAGAGAAGGCATCACTaGGCCAATTGTCTAACTAGGCTCTTTGGAACTGGCCATATCTCA +
Preference number: 1 (lower is better)
Translates to: GQACIPALKIQRRHH*ANCLTRLFGTGHIS
Trigger: TGAGATATGGCCAGTTCCAAAGAGCCTAGTTAGACAATTGGCCCAGTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCAGGCTTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR GCA 90 bp GACTGGAGTTCAAAGTGTAGCACCAAAATAAAAGCTGGGCAAGCCTaGATCCCAGCACTGAAGATACAGAGAAGGCATCACTGGGCCAAT +
Preference number: 1 (lower is better)
Translates to: DWSSKCSTKIKAGQA*IPALKIQRRHHWAN
Trigger: ATTGGCCCAGTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCAGGCTTGCCCAGCTTTTATTTTGGTGCTACACTTTGAACTCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 90 bp ATGACTCAACAATTAAGGACCCCTGCTCAGTTCCCAGCACCCACATaGAGCAGTTCACAAGTGCCTATAACTCCAGCTCCAGTTATTGGA +
Preference number: 1 (lower is better)
Translates to: MTQQLRTPAQFPAPT*SSSQVPITPAPVIG
Trigger: TCCAATAACTGGAGCTGGAGTTATAGGCACTTGTGAACTGCTTCATGTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGTTGAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 90 bp CAAATTTATCAGTTGATAGCACATTCCCTGAACAAGCACAAGGACTaGAGTTCAAAGTGTAGCACCAAAATAAAAGCTGGGCAAGCCTGC +
Preference number: 1 (lower is better)
Translates to: QIYQLIAHSLNKHKD*SSKCSTKIKAGQAC
Trigger: GCAGGCTTGCCCAGCTTTTATTTTGGTGCTACACTTTGAACTCCAGTCCTTGTGCTTGTTCAGGGAATGTGCTATCAACTGATAAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 90 bp ACTGGATTTAGTGGACTATCAAGAAAGGAAGATGGGAGAGAGTCTTaGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGATAGA +
Preference number: 1 (lower is better)
Translates to: TGFSGLSRKEDGRES*DLCVGSWKIEMEDR
Trigger: TCTATCTTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATCTTCCTTTCTTGATAGTCCACTAAATCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 90 bp AGAAAGGAAGATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGATAGAAACAACTATACTCCATTGCAT +
Preference number: 1 (lower is better)
Translates to: RKEDGRESWDLCVGS*KIEMEDRNNYTPLH
Trigger: ATGCAATGGAGTATAGTTGTTTCTATCTTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATCTTCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 90 bp GATGGGAAGAATTCTTTAAATTTCTGCATTATGGACATTATATGGTaGTCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCC +
Preference number: 1 (lower is better)
Translates to: DGKNSLNFCIMDIIW*SQSLSHTCTRSRQS
Trigger: GGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGATCACCATATAATGTCCATAATGCAGAAATTTAAAGAATTCTTCCCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 90 bp ATATTCACACCTAATACAGGCATCCATGAGATCATGCTCATTTTCTaGATGCTCAGATCATCATTAAGAAAGAGACAAAGGATGCAAAAC +
Preference number: 1 (lower is better)
Translates to: IFTPNTGIHEIMLIF*MLRSSLRKRQRMQN
Trigger: GTTTTGCATCCTTTGTCTCTTTCTTAATGATGATCTGAGCATTCAGAAAATGAGCATGATCTCATGGATGCCTGTATTAGGTGTGAATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 90 bp GATCCATTTTCCCTTTCTTATATTGTTTCAGTACCTTCTCATCTGTaGATAATTATTTCTCGGTTAGAAAGTAGGTTTCTGCTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: DPFSLSYIVSVPSHL*IIISRLESRFLLSL
Trigger: GAGAGAGAGCAGAAACCTACTTTCTAACCGAGAAATAATTATTCACAGATGAGAAGGTACTGAAACAATATAAGAAAGGGAAAATGGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCAAACACAGGTGTGGTaGTGCAAGCCTGTCATCCTG +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYQTQVW*CKPVIL
Trigger: CAGGATGACAGGCTTGCACCACCACACCTGTGTTTG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACAAGCACTCAGAAGGCTaGAGCAGGAGAGTTGAATGT +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYKHSEG*SRRVEC
Trigger: ACATTCAACTCTCCTGCTTCAGCCTTCTGAGTGCTT...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTCATTGTCTCACACCTaGACAAGATCAAGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYSLSHT*TRSRQS
Trigger: GGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTTAGTTTCTCACTTGTaGGTTATGCAGGAGATGCAG +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYLVSHL*VMQEMQ
Trigger: CTGCATCTCCTGCATAACTCACAAGTGAGAAACTAA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCATCTTTTGGGTGTATaGTCACGAGTGGTATATCTG +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYHLLGV*SRVVYL
Trigger: CAGATATACCACTCGTGAGCATACACCCAAAAGATG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACGCTTCTTTTGGTTTGTaGATGATAGCATGGTTATCC +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYASFGL*MIAWLS
Trigger: GGATAACCATGCTATCATCCACAAACCAAAAGAAGC...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGAT +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYLCVGS*KIEMED
Trigger: ATCTTCCATTTCTATCTTCCAACTCCCCACACATAG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACAAAGAATGCAGGAACTaGATGATGGGAAGAATTCTT +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYKECRN*MMGRIL
Trigger: AAGAATTCTTCCCATCATTCAGTTCCTGCATTCTTT...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCACGAGTGGTATATCTaGGTCTTAAGAAAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYHEWYI*VLRKVK
Trigger: TTTCACTTTTCTTAAGACCCAGATATACCACTCGTG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTTGGTTTATCTCACTTaGGATGTGTTCTCCTACTTT +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYLVYLT*DVFSYF
Trigger: AAAGTAGGAGAACACATCCCAAGTGAGATAAACCAA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 90 bp TCACCTCAGCAGAGACTTTGCCTCAGTCAATGGACTAGAGAAGGGTaGAGGAAGGCACTTAATGTCAGCTTTGGGCCTTCATGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: SPQQRLCLSQWTREG*RKALNVSFGPSWVC
Trigger: ACACACCCATGAAGGCCCAAAGCTGACATTAAGTGCCTTCCTCAACCCTTCTCTAGTCCATTGACTGAGGCAAAGTCTCTGCTGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACGCAATAAATAGCTTCTaGAAAAGGGAAAATTCCTTC +
Preference number: 2 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYAINSF*KRENSF
Trigger: GAAGGAATTTTCCCTTTTCCAGAAGCTATTTATTGC...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAATGCAAACACAGGTGTaGTGGTGCAAGCCTGTCATC +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEMQTQV*WCKPVI
Trigger: GATGACAGGCTTGCACCACCACACCTGTGTTTGCAT...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGCCATTCTACAGAGGTaGTGTAACCAGTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEAILQR*CNQFSS
Trigger: ACTGGAGAACTGGTTACATCACCTCTGTAGAATGGC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCATGTCCTTCCCAACATTaGTCTCTCCTGTTCCTATCC +
Preference number: 2 (lower is better)
Translates to: ITIIVSHLHKIKAVQIPACPSQH*SLLFLS
Trigger: GGATAGGAACAGGAGAGATCAATGTTGGGAAGGACA...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTTCCCAGCACCCACATaGAGCAGTTCACAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVIFPAPT*SSSQVP
Trigger: AGGCACTTGTGAACTGCTTCATGTGGGTGCTGGGAA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCACAATTAAGGACCCCTaGTCAGTTCCCAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVITIKDP*SVPSTH
Trigger: GTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGT...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCACTGGTATATTTTCCATaGTCCAGGGGGAATACCCAT +
Preference number: 2 (lower is better)
Translates to: ITIIVSHLHKIKAVQIPALVYFP*SRGNTH
Trigger: ATGGGTATTCCCCCTGGAGCATGGAAAATATACCAG...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTGTCCTTCCCAACATTaGTCTCTCCTGTTCCTATCC +
Preference number: 2 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVICPSQH*SLLFLS
Trigger: GGATAGGAACAGGAGAGATCAATGTTGGGAAGGACA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAACAATTAAGGACCCCTaGTCAGTTCCCAGCACCCAC +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINITIKDP*SVPSTH
Trigger: GTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATACAAACACAGGTGTGGTaGTGCAAGCCTGTCATCCTG +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIQTQVW*CKPVIL
Trigger: CAGGATGACAGGCTTGCACCACCACACCTGTGTTTG...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 90 bp GGGGGTCAGGATTTATTATCCTCCACAATTGAGAACTGGCTTATTTaGCCTCCACATTCCTCATTCTTAGGCATCTTAGGGTTACTCTCA +
Preference number: 2 (lower is better)
Translates to: GGQDLLSSTIENWLI*PPHSSFLGILGLLS
Trigger: TGAGAGTAACCCTAAGATGCCTAAGAATGAGGAATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGAGGATAATAAATCCTGACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp AGTTTCTCACTTGTGAGTTATGCAGGAGATGCAGAAATTAATTGGAAGAAGCCCAACCTAGAAAATGCCTaGAGAAGCTCCGGTGAAACC +
Preference number: 2 (lower is better)
Translates to: SFSLVSYAGDAEINWKKPNLENA*RSSGET
Trigger: GGTTTCACCGGAGCTTCTTCAGGCATTTTCTAGGTT...GGGCTTCTTCCAATTAATTTCTGCATCTCCTGCATAACTCACAAGTGAGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGCATCCATGAGATCATaGTCATTTTCTGAATGCTCA +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEASMRS*SFSECS
Trigger: TGAGCATTCAGAAAATGAGCATGATCTCATGGATGC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATCACTCAGCTTCTTTTaGTTTGTGGATGATAGCATG +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMESLSFF*FVDDSM
Trigger: CATGCTATCATCCACAAACCAAAAGAAGCTGAGTGA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATCCACAATTGAGAACTaGCTTATTTTGCCTCCACAT +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMESTIEN*LILPPH
Trigger: ATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAAACCCAGCCATGAGATaGCTGTTATTTTCAAAGTTG +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMENPAMR*LLFSKL
Trigger: CAACTTTGAAAATAACAGCCATCTCATGGCTGGGTT...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCACTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGAT +
Preference number: 2 (lower is better)
Translates to: ITIIVSHLHKIKAVQIPALCVGS*KIEMED
Trigger: ATCTTCCATTTCTATCTTCCAACTCCCCACACATAG...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCGCCATTCTACAGAGGTaGTGTAACCAGTTCTCCAGT +
Preference number: 2 (lower is better)
Translates to: QFLAIMNKAAMNKVEQVSAILQR*CNQFSS
Trigger: ACTGGAGAACTGGTTACATCACCTCTGTAGAATGGC...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGAGAAATTGCCATGTTaGTTTTCAAACACACCTGTT +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEEKLPC*FSNTPV
Trigger: AACAGGTGTGTTTGAAAATCAACATGGCAATTTCTC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCAGGGCCTGCCTGGACTaGACAGTAAGTACTAGGTCA +
Preference number: 2 (lower is better)
Translates to: ECISKCYTLLNMYSHLQPRACLD*TVSTRS
Trigger: TGACCTAGTACTTACTGTTCAGTCCAGGCAGGCCCT...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAAAGCACTCAGAAGGCTaGAGCAGGAGAGTTGAATGT +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIKHSEG*SRRVEC
Trigger: ACATTCAACTCTCCTGCTTCAGCCTTCTGAGTGCTT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGATGCAGAAATTAATTaGAAGAAGCCCCATATCATC +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEDAEIN*KKPHII
Trigger: GATGATATGGGGCTTCTTCCAATTAATTTCTGCATC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAACACGAGTGGTATATCTaGGTCTTAAGAAAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEHEWYI*VLRKVK
Trigger: TTTCACTTTTCTTAAGACCCAGATATACCACTCGTG...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGGGATGGAACATCTTTTaGGTGTATGCTCACGAGTGG +
Preference number: 2 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLGWNIF*VYAHEW
Trigger: CCACTCGTGAGCATACACCCAAAAGATGTTCCATCC...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR TCA 90 bp ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGAACCTAGAAAATGCCTaGAGAAGCTCCGGTGAAACC +
Preference number: 2 (lower is better)
Translates to: MQKLIGRSPISSEEREMKNLENA*RSSGET
Trigger: GGTTTCACCGGAGCTTCTTCAGGCATTTTCTAGGTT...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGCTTATGGCAAAGTCTTaGCATTGTCAGAAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLLMAKS*HCQKRP
Trigger: TGGCCTCTTCTGACAATGGCAAGACTTTGCCATAAG...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTCCACAATTGAGAACTaGCTTATTTTGCCTCCACAT +
Preference number: 2 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVISTIEN*LILPPH
Trigger: ATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 90 bp GTGAGCACATACTGTGTTTGTCTTTCTGAGTTTGGTTTATCTCACTaGGGATGTGTTCTCCTACTTTCAACCATTTGCCAGCAAATTTCA +
Preference number: 2 (lower is better)
Translates to: VSTYCVCLSEFGLSH*GCVLLLSTICQQIS
Trigger: TGAAATTTGCTGGCAAATGGTTGAAAGTAGGAGAACACATCCCAAGTGAGATAAACCAAACTCAGAAAGACAAACACAGTATGTGCTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATACATCTTTTGGGTGTATaGTCACGAGTGGTATATCTG +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIHLLGV*SRVVYL
Trigger: CAGATATACCACTCGTGAGCATACACCCAAAAGATG...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGGTCCTTGTGGTAGGATaGAACATCTTTTGGGTGTAT +
Preference number: 2 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLVLVVG*NIFWVY
Trigger: ATACACCCAAAAGATGTTCCATCCTACCACAAGGAC...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 90 bp ATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGTATTaGAATAACTTCCTGAGCAAACCTAGAAAATGCCTGAAGAAGCTC +
Preference number: 2 (lower is better)
Translates to: IGRSPISSEEREMKY*NNFLSKPRKCLKKL
Trigger: GAGCTTCTTCAGGCATTTTCTAGGTTTGCTCAGGAAGTTATTCAAATACTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR GCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAAGAAGCATTTTGAAATaGAAACACAGGTGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIRSILK*KHRCGG
Trigger: ACCACCACACCTGTGTTTGCATTTCAAAATGCTTCT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGTCACTCAGCTTCTTTTaGTTTGTGGATGATAGCATG +
Preference number: 2 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLSLSFF*FVDDSM
Trigger: CATGCTATCATCCACAAACCAAAAGAAGCTGAGTGA...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGATGCAGAAATTAATTaGAAGAAGCCCCATATCATC +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIDAEIN*KKPHII
Trigger: GATGATATGGGGCTTCTTCCAATTAATTTCTGCATC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGTTGTGGATGATAGCATaGTTATCCTTTACTTTAGGG +
Preference number: 2 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLLWMIA*LSFTLG
Trigger: CCCTAAAGTAAAGGATAACCATGCTATCATCCACAA...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 90 bp GGGAGTTGGAAGATAGAAATGGAAGATAGAAACAACTATACTCCATaGCATGCATATATGCAATTTCCAAAAACTATGGAAAAGTACCCC +
Preference number: 2 (lower is better)
Translates to: GSWKIEMEDRNNYTP*HAYMQFPKTMEKYP
Trigger: GGGGTACTTTTCCATAGTTTTTGGAAATTGCATATATGCATGCAATGGAGTATAGTTGTTTCTATCTTCCATTTCTATCTTCCAACTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAACACTCTTCATAATTTaGGGGGTCAGGATTTATTAT +
Preference number: 2 (lower is better)
Translates to: HLQPSHEMAVIFKVVINITLFII*GVRIYY
Trigger: ATAATAAATCCTGACCCCCCAAATTATGAAGAGTGT...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR GCA 72 bp GTCAGCTTTGGGCCTTCATGGGTGTGTCCAGTCATGTaGATGTCCACTCGTGCCCGCCCATACATATACGTG +
Preference number: 3 (lower is better)
Translates to: VSFGPSWVCPVM*MSTRARPYIYV
Trigger: CACGTATATGTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCCAAAGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCTCCAGCTCCAGTTATaGGATCCCACATCTTATTCA +
Preference number: 3 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYLQLQL*DPTSYS
Trigger: TGAATAAGATGTGGGATCCAATAACTGGAGCTGGAG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACTCTATGTGTGGGGAGTaGGAAGATAGAAATGGAAGA +
Preference number: 3 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYSMCGE*EDRNGR
Trigger: TCTTCCATTTCTATCTTCCAACTCCCCACACATAGA...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 72 bp CAATTAAGGACCCCTGCTCAGTTCCCAGCACCCACATaGAGCAGTTCACAAGTGCCTATAACTCCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: QLRTPAQFPAPT*SSSQVPITPAP
Trigger: TGGAGCTGGAGTTATAGGCACTTGTGAACTGCTTCATGTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 72 bp TGCATCCCAGCACTGAAGATACAGAGAAGGCATCACTaGGCCAATTGTCTAACTAGGCTCTTTGGAACTGGC +
Preference number: 3 (lower is better)
Translates to: CIPALKIQRRHH*ANCLTRLFGTG
Trigger: GCCAGTTCCAAAGAGCCTAGTTAGACAATTGGCCCAGTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR GCA 72 bp AAGAACAGGAGAGATGACTCAACAATTAAGGACCCCTaGTCAGTTCCCAGCACCCACATGAAGCAGTTCACA +
Preference number: 3 (lower is better)
Translates to: KNRRDDSTIKDP*SVPSTHMKQFT
Trigger: TGTGAACTGCTTCATGTGGGTGCTGGGAACTGAGCAGGGGTCCTTAATTGTTGAGTCATCTCTCCTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR GCA 72 bp TCAAAGTGTAGCACCAAAATAAAAGCTGGGCAAGCCTaGATCCCAGCACTGAAGATACAGAGAAGGCATCAC +
Preference number: 3 (lower is better)
Translates to: SKCSTKIKAGQA*IPALKIQRRHH
Trigger: GTGATGCCTTCTCTGTATCTTCAGTGCTGGGATGCAGGCTTGCCCAGCTTTTATTTTGGTGCTACACTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 72 bp CATATCTCACCTCAGCAGAGACTTTGCCTCAGTCAATaGACTAGAGAAGGGTTGAGGAAGGCACTTAATGTC +
Preference number: 3 (lower is better)
Translates to: HISPQQRLCLSQ*TREGLRKALNV
Trigger: GACATTAAGTGCCTTCCTCAACCCTTCTCTAGTCCATTGACTGAGGCAAAGTCTCTGCTGAGGTGAGATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAACTCCAGCTCCAGTTATaGGATCCCACATCTTATTCA +
Preference number: 3 (lower is better)
Translates to: DGRESWDLCVGSWKIEMELQLQL*DPTSYS
Trigger: TGAATAAGATGTGGGATCCAATAACTGGAGCTGGAG...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 72 bp GCAGGAGAGTTGAATGTATTCAGGGCCTGCCTGGACTaGACAGTAAGTACTAGGTCAGCATTGGTTAAAGTA +
Preference number: 3 (lower is better)
Translates to: AGELNVFRACLD*TVSTRSALVKV
Trigger: TACTTTAACCAATGCTGACCTAGTACTTACTGTTCAGTCCAGGCAGGCCCTGAATACATTCAACTCTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 72 bp GGGGGTCAGGATTTATTATCCTCCACAATTGAGAACTaGCTTATTTTGCCTCCACATTCCTCATTCTTAGGC +
Preference number: 3 (lower is better)
Translates to: GGQDLLSSTIEN*LILPPHSSFLG
Trigger: GCCTAAGAATGAGGAATGTGGAGGCAAAATAAGCCAGTTCTCAATTGTGGAGGATAATAAATCCTGACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATTTGGTTTATCTCACTaGGGATGTGTTCTCCTACTT +
Preference number: 3 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEFGLSH*GCVLLL
Trigger: AAGTAGGAGAACACATCCCAAGTGAGATAAACCAAA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAATTTGTCTTTCTGAGTTaGGTTTATCTCACTTGGGAT +
Preference number: 3 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEFVFLS*VYLTWD
Trigger: ATCCCAAGTGAGATAAACCAAACTCAGAAAGACAAA...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCGCTGAAGCAGGAGAGTaGAATGTATTCAGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: ECISKCYTLLNMYSHLQPAEAGE*NVFRAC
Trigger: GCAGGCCCTGAATACATTCAACTCTCCTGCTTCAGC...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CCA 72 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTaGAAGATAGAAATGGAAGATAGAAACAACTATACT +
Preference number: 3 (lower is better)
Translates to: DGRESWDLCVGS*KIEMEDRNNYT
Trigger: AGTATAGTTGTTTCTATCTTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTCAGCTTCTTTTGGTTaGTGGATGATAGCATGGTTA +
Preference number: 3 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVISASFG*WMIAWL
Trigger: TAACCATGCTATCATCCACAAACCAAAAGAAGCTGA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATATTTGGTTTATCTCACTaGGGATGTGTTCTCCTACTT +
Preference number: 3 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIFGLSH*GCVLLL
Trigger: AAGTAGGAGAACACATCCCAAGTGAGATAAACCAAA...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGTCAGCTTCTTTTGGTTaGTGGATGATAGCATGGTTA +
Preference number: 3 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLSASFG*WMIAWL
Trigger: TAACCATGCTATCATCCACAAACCAAAAGAAGCTGA...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 72 bp CCTAATACAGGCATCCATGAGATCATGCTCATTTTCTaGATGCTCAGATCATCATTAAGAAAGAGACAAAGG +
Preference number: 3 (lower is better)
Translates to: PNTGIHEIMLIF*MLRSSLRKRQR
Trigger: CCTTTGTCTCTTTCTTAATGATGATCTGAGCATTCAGAAAATGAGCATGATCTCATGGATGCCTGTATTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR-3UTR CAA 90 bp GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCTATTATCCTCCACAATaGAGAACTGGCTTATTTTGC +
Preference number: 3 (lower is better)
Translates to: ECISKCYTLLNMYSHLQPYYPPQ*RTGLFC
Trigger: GCAAAATAAGCCAGTTCTCAATTGTGGAGGATAATA...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR TCA 72 bp CAAAGTTATGTTTCCTGTCTCACAAGTCAAAACATTTaGCAAGTAGTATTTATGGAGTCTACATTTCCCCAA +
Preference number: 3 (lower is better)
Translates to: QSYVSCLTSQNI*QVVFMESTFPQ
Trigger: TTGGGGAAATGTAGACTCCATAAATACTACTTGTCAAATGTTTTGACTTGTGAGACAGGAAACATAACTTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp GGGCCTTCATGGGTGTGTCCAGTCATGTGCATGTCCACTCGTGCCCGCCCATACCGTAAGTCAGAAGGATaGGCAAGAATGTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPSWVCPVMCMSTRARPYRKSEG*ARMYPA
Trigger: TGCTGGGTACATTCTTGCTCATCCTTCTGACTTACG...GTATGGGCGGGCACGAGTGGACATGCACATGACTGGACACACCCATGAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR GCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGGACAGCCTCAGAACTaGCCTCATATGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEGQPQN*PHMAEE
Trigger: TTCTTCTGCCATATGAGGGCAGTTCTGAGGCTGTCC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR GCA 90 bp ATCACAATCATTGTCTCACACCTGCACAAGATCAAGGCAGTCCAAATCCCAGCAGACGGTATATGGAACTaGTATGAGTGTGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: ITIIVSHLHKIKAVQIPADGIWN*YECVIS
Trigger: GGAGATGACACACTCATAGCAGTTCCATATACCGTC...TGCTGGGATTTGGACTGCCTTGATCTTGTGCAGGTGTGAGACAATGATTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAAAGTACATAGGAGTGTaGAGAGATCTGTCCACCCAA +
Preference number: 4 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEKYIGV*RDLSTQ
Trigger: TTGGGTGGACAGATCTCTCCACACTCCTATGTACTT...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR GCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCAGGAAGAAACACATCTaGAAGCCACAGCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVIRKKHI*KPQPVT
Trigger: AGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCT...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp GATGGGAGAGAGTCTTGGGATCTATGTGTGGGGAGTTGGAAGATAGAAATGGAAGGTAATGACGGTATATaGAACTGCTATGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: DGRESWDLCVGSWKIEMEGNDGI*NCYECV
Trigger: GACACACTCATAGCAGTTCCATATACCGTCATTACC...TTCCATTTCTATCTTCCAACTCCCCACACATAGATCCCAAGACTCTCTCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCGGACAGAAGAAAGGATaGACACGTAAGTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVIGQKKG*TRKSEG
Trigger: TCCTTCTGACTTACGTGTTCATCCTTTCTTCTGTCC...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp AGTTTCTCACTTGTGAGTTATGCAGGAGATGCAGAAATTAATTGGAAGAAGCCCTATATGGAACTGCTATaGGTGTGTCATCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: SFSLVSYAGDAEINWKKPYMELL*VCHLLR
Trigger: CCGGAGGAGATGACACACTCATAGCAGTTCCATATA...GGGCTTCTTCCAATTAATTTCTGCATCTCCTGCATAACTCACAAGTGAGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCTATATGGAACTGCTATaGGTGTGTCATCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: QFLAIMNKAAMNKVEQVSYMELL*VCHLLR
Trigger: CCGGAGGAGATGACACACTCATAGCAGTTCCATATA...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR GCA 90 bp CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCAGGAAGAAACACATCTaGAAGCCACAGCCTGTGACT +
Preference number: 4 (lower is better)
Translates to: QFLAIMNKAAMNKVEQVSRKKHI*KPQPVT
Trigger: AGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCT...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR GCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGGCACAGGTGGAAAATaGCTTTTGTTTACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIGTGGK*LLFTLS
Trigger: GCTGAGGGTAAACAAAAGGCATTTTCCACCTGTGCC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp AGTTTCTCACTTGTGAGTTATGCAGGAGATGCAGAAATTAATTGGAAGAAGCCCAAGTACATAGGAGTGTaGAGAGATCTGTCCACCCAA +
Preference number: 4 (lower is better)
Translates to: SFSLVSYAGDAEINWKKPKYIGV*RDLSTQ
Trigger: TTGGGTGGACAGATCTCTCCACACTCCTATGTACTT...GGGCTTCTTCCAATTAATTTCTGCATCTCCTGCATAACTCACAAGTGAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR GCA 90 bp ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGGGCACAGGTGGAAAATaGCTTTTGTTTACCCTCAGC +
Preference number: 4 (lower is better)
Translates to: MQKLIGRSPISSEEREMKGTGGK*LLFTLS
Trigger: GCTGAGGGTAAACAAAAGGCATTTTCCACCTGTGCC...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCTCCTCCGGAGTTTTCTaGCTTCATATAAACAACAGA +
Preference number: 4 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVISSGVF*LHINNR
Trigger: TCTGTTGTTTATATGAAGCCAGAAAACTCCGGAGGA...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGATTGGACTGAGGAATaGGGTAATGACGGTATATGG +
Preference number: 4 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIDWTEE*GNDGIW
Trigger: CCATATACCGTCATTACCCCATTCCTCAGTCCAATC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp TCACTGCATAATTATGAAAAGCATAAGACAGCTGTGATTCATGTAGGACAGCTGCATACCCCATCAAAGTaGGAAGGATACAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLHNYEKHKTAVIHVGQLHTPSK*EGYSLF
Trigger: GAACAAACTGTATCCTTCTCACTTTGATGGGGTATG...CAGCTGTCCTACATGAATCACAGCTGTCTTATGCTTTTCATAATTATGCAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGGGACAGAAGAAAGGATaGACACGTAAGTCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: MQKLIGRSPISSEEREMKGQKKG*TRKSEG
Trigger: TCCTTCTGACTTACGTGTTCATCCTTTCTTCTGTCC...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGGTAATGACGGTATATaGAACTGCTATGAGTGTGTC +
Preference number: 4 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIGNDGI*NCYECV
Trigger: GACACACTCATAGCAGTTCCATATACCGTCATTACC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 72 bp AAGAAGTCCCATCCTTTTCACTCAGCTTCTTTTGGTTaGTGGATGATAGCATGGTTATCCTTTACTTTAGGG +
Preference number: 4 (lower is better)
Translates to: KKSHPFHSASFG*WMIAWLSFTLG
Trigger: CCCTAAAGTAAAGGATAACCATGCTATCATCCACAAACCAAAAGAAGCTGAGTGAAAAGGATGGGACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR TCA 90 bp ATGCAGAAATTAATTGGAAGAAGCCCCATATCATCAGAAGAAAGGGAAATGAAGCATACCCCATCAAAGTaGGAAGGATACAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: MQKLIGRSPISSEEREMKHTPSK*EGYSLF
Trigger: GAACAAACTGTATCCTTCTCACTTTGATGGGGTATG...CTTCATTTCCCTTTCTTCTGATGATATGGGGCTTCTTCCAATTAATTTCTGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGTCCACATGCAACATTaGTCATTAGAAGAGGATATC +
Preference number: 4 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIVHMQH*SLEEDI
Trigger: GATATCCTCTTCTAATGACCAATGTTGCATGTGGAC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCGATTGGACTGAGGAATaGGGTAATGACGGTATATGG +
Preference number: 4 (lower is better)
Translates to: ECISKCYTLLNMYSHLQPDWTEE*GNDGIW
Trigger: CCATATACCGTCATTACCCCATTCCTCAGTCCAATC...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CCA 90 bp GAATGTATAAGTAAGTGCTATACTTTGTTAAACATGTATAGTCACCTCCAACCCGTCCACATGCAACATTaGTCATTAGAAGAGGATATC +
Preference number: 4 (lower is better)
Translates to: ECISKCYTLLNMYSHLQPVHMQH*SLEEDI
Trigger: GATATCCTCTTCTAATGACCAATGTTGCATGTGGAC...GGGTTGGAGGTGACTATACATGTTTAACAAAGTATAGCACTTACTTATACATTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
3UTR CAA 72 bp ACAAAGTTATGTTTCCTGTCTCACAAGTCAAAACATTaGACAAGTAGTATTTATGGAGTCTACATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TKLCFLSHKSKH*TSSIYGVYISP
Trigger: TGGGGAAATGTAGACTCCATAAATACTACTTGTCAAATGTTTTGACTTGTGAGACAGGAAACATAACTTTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS TCA 90 bp TCCAAGGCCCAGGAAGAAACACATCTGCAAGCCACAGCCTGTGACTaGAATGCGGCTGTCCTTGTCTATCAGATCCACCAGCATCTTGGG +
Preference number: 5 (lower is better)
Translates to: SKAQEETHLQATACD*NAAVLVYQIHQHLG
Trigger: CCCAAGATGCTGGTGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCTGGGCCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS TCA 90 bp TTCCTCCAAGGCCCAGGAAGAAACACATCTGCAAGCCACAGCCTGTaGCTGAAATGCGGCTGTCCTTGTCTATCAGATCCACCAGCATCT +
Preference number: 5 (lower is better)
Translates to: FLQGPGRNTSASHSL*LKCGCPCLSDPPAS
Trigger: AGATGCTGGTGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCTGGGCCTTGGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CAA 90 bp TATAAGAAGCATTTTGAAATGCAAACACAGGTGTGGTGGTGCAAGCCTGTCATCGAAATGCGGCTGTCCTaGTCTATCAGATCCACCAGC +
Preference number: 5 (lower is better)
Translates to: YKKHFEMQTQVWWCKPVIEMRLS*SIRSTS
Trigger: GCTGGTGGATCTGATAGACAAGGACAGCCGCATTTC...GATGACAGGCTTGCACCACCACACCTGTGTTTGCATTTCAAAATGCTTCTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS CCA 90 bp GAGTGTGAATATGATTGGACTGAGGAATGGGGTAATGACGGTATATaGAACTGCTATGAGTGTGTCATCTCCTCCGGAGTTTTCTGGCTT +
Preference number: 5 (lower is better)
Translates to: ECEYDWTEEWGNDGI*NCYECVISSGVFWL
Trigger: AAGCCAGAAAACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATATTCACACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CAA 90 bp CACCTCCAACCCAGCCATGAGATGGCTGTTATTTTCAAAGTTGTCATTAATATAGAAATGCGGCTGTCCTaGTCTATCAGATCCACCAGC +
Preference number: 5 (lower is better)
Translates to: HLQPSHEMAVIFKVVINIEMRLS*SIRSTS
Trigger: GCTGGTGGATCTGATAGACAAGGACAGCCGCATTTC...TATATTAATGACAACTTTGAAAATAACAGCCATCTCATGGCTGGGTTGGAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS TCA 90 bp GCAAAGGAAGACCACAAAGAGCCAGGTCTGTACAAGTGGGTAAGCTaGGAAGCCTATGAGAATGAATTCTTTCAGGATTGTTTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: AKEDHKEPGLYKWVS*EAYENEFFQDCLVD
Trigger: ATCAACCAAACAATCCTGAAAGAATTCATTCTCATAGGCTTCTCAGCTTACCCACTTGTACAGACCTGGCTCTTTGTGGTCTTCCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS GCA 90 bp GAATATGATTGGACTGAGGAATGGGGTAATGACGGTATATGGAACTaGTATGAGTGTGTCATCTCCTCCGGAGTTTTCTGGCTTCATATA +
Preference number: 5 (lower is better)
Translates to: EYDWTEEWGNDGIWN*YECVISSGVFWLHI
Trigger: TATATGAAGCCAGAAAACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS-3UTR CAA 90 bp CAGTTTCTGGCTATTATGAATAAAGCTGCTATGAACAAGGTTGAACAAGTGTCCAGCAGAGGCCACAAGTaGTCCACATGCAACATTGGT +
Preference number: 5 (lower is better)
Translates to: QFLAIMNKAAMNKVEQVSSRGHK*STCNIG
Trigger: ACCAATGTTGCATGTGGACAACTTGTGGCCTCTGCT...GGACACTTGTTCAACCTTGTTCATAGCAGCTTTATTCATAATAGCCAGAAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS TCA 90 bp GTAAGTCAGAAGGATGAGCAAGAATGTACCCAGCAAACCAGACACTaGCATCAGTGTTACAATGAATTCTGTGAAGTTACTGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: VSQKDEQECTQQTRH*HQCYNEFCEVTVCA
Trigger: TGCACAGACAGTAACTTCACAGAATTCATTGTAACACTGATGTCAGTGTCTGGTTTGCTGGGTACATTCTTGCTCATCCTTCTGACTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS TCA 72 bp GGCCCAGGAAGAAACACATCTGCAAGCCACAGCCTGTaGCTGAAATGCGGCTGTCCTTGTCTATCAGATCCA +
Preference number: 6 (lower is better)
Translates to: GPGRNTSASHSL*LKCGCPCLSDP
Trigger: TGGATCTGATAGACAAGGACAGCCGCATTTCAGTCACAGGCTGTGGCTTGCAGATGTGTTTCTTCCTGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS CAA 90 bp GTGTGGAGAGATCTGTCCACCCAAGTTAAACCCATGATGGCCAGGTaGCCTGCAAGAGTGACCATATACAGGCAAAGGAAGACCACAAAG +
Preference number: 6 (lower is better)
Translates to: VWRDLSTQVKPMMAR*PARVTIYRQRKTTK
Trigger: CTTTGTGGTCTTCCTTTGCCTGTATATGGTCACTCTTGCAGGCAACCTGGCCATCATGGGTTTAACTTGGGTGGACAGATCTCTCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS CAA 72 bp GATCTGTCCACCCAAGTTAAACCCATGATGGCCAGGTaGCCTGCAAGAGTGACCATATACAGGCAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: DLSTQVKPMMAR*PARVTIYRQRK
Trigger: CTTCCTTTGCCTGTATATGGTCACTCTTGCAGGCAACCTGGCCATCATGGGTTTAACTTGGGTGGACAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS GCA 72 bp TGGACTGAGGAATGGGGTAATGACGGTATATGGAACTaGTATGAGTGTGTCATCTCCTCCGGAGTTTTCTGG +
Preference number: 6 (lower is better)
Translates to: WTEEWGNDGIWN*YECVISSGVFW
Trigger: CCAGAAAACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS CCA 72 bp TATGATTGGACTGAGGAATGGGGTAATGACGGTATATaGAACTGCTATGAGTGTGTCATCTCCTCCGGAGTT +
Preference number: 6 (lower is better)
Translates to: YDWTEEWGNDGI*NCYECVISSGV
Trigger: AACTCCGGAGGAGATGACACACTCATAGCAGTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS TCA 72 bp GACCACAAAGAGCCAGGTCTGTACAAGTGGGTAAGCTaGGAAGCCTATGAGAATGAATTCTTTCAGGATTGT +
Preference number: 6 (lower is better)
Translates to: DHKEPGLYKWVS*EAYENEFFQDC
Trigger: ACAATCCTGAAAGAATTCATTCTCATAGGCTTCTCAGCTTACCCACTTGTACAGACCTGGCTCTTTGTGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2
CDS CCA 72 bp ATTCTTCATATCCTTATTCCTGAGTGTGAATATGATTaGACTGAGGAATGGGGTAATGACGGTATATGGAAC +
Preference number: 6 (lower is better)
Translates to: ILHILIPECEYD*TEEWGNDGIWN
Trigger: GTTCCATATACCGTCATTACCCCATTCCTCAGTCCAATCATATTCACACTCAGGAATAAGGATATGAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085862.2
ENSMUST00000217962.2
ENSMUST00000220394.2