Pregenerated sensors for OLFR406 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070375Ensembl transcript IDs: ENSMUST00000133561.6, ENSMUST00000214303.2, ENSMUST00000217016.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTGTGGAAGAGAGGATGGAAAGAGTGTAACGGCCAGAGAACCTGGAGGAACTCTATTGGAGAAAGGGGATaGGGGAGAGTGGATATGAGC | + |
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Preference number: 2 (lower is better) Translates to: LWKRGWKECNGQRTWRNSIGERG*GRVDMS Trigger: GCTCATATCCACTCTCCCCCATCCCCTTTCTCCAAT...AGAGTTCCTCCAGGTTCTCTGGCCGTTACACTCTTTCCATCCTCTCTTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCGGATGTAGTCAGGAACTGTGTAAACACAAGTACGAATCTGCTCTTAGCGCTTGTACAAGACCATaGCAGGTCCCACCCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSGCSQELCKHKYESALSACTRP*QVPPTV Trigger: AACTGTGGGTGGGACCTGGCATGGTCTTGTACAAGC...GCTAAGAGCAGATTCGTACTTGTGTTTACACAGTTCCTGACTACATCCGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CCA 90 bp | AACGGCCAGAGAACCTGGAGGAACTCTTCAAAACAATGTCTTCTGGATACGACAGAGAGTGTCAGGGAGTaGAGTGTGACAAAGCACACA | + |
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Preference number: 2 (lower is better) Translates to: NGQRTWRNSSKQCLLDTTESVRE*SVTKHT Trigger: TGTGTGCTTTGTCACACTCCACTCCCTGACACTCTC...TGTCGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCAGAGAACCTGGAGGAACTCTTCAAAACAATGTCTTCTGGATACGACAGGGAACGGTTGTCTTGTATaGCATCTGTCATTGACTAAA | + |
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Preference number: 2 (lower is better) Translates to: GQRTWRNSSKQCLLDTTGNGCLV*HLSLTK Trigger: TTTAGTCAATGACAGATGGCATACAAGACAACCGTT...CCCTGTCGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CCA 90 bp | AACGGCCAGAGAACCTGGAGGAACTCTTCAAAACAATGTCTTCTGGATACGACAGTGACAAAGCACACATaGGGTTCAGAAAGAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: NGQRTWRNSSKQCLLDTTVTKHT*GSERDN Trigger: ATTGTCTCTTTCTGAACCCCATGTGTGCTTTGTCAC...TGTCGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGAGAACCTGGAGGAACTCTTCAAAACAATGTCTTCTGGATACGACAGGGTACCCCTTGTGTTTGTaGGGAATATTAGAATCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: GQRTWRNSSKQCLLDTTGYPLCL*GILESV Trigger: TACTGATTCTAATATTCCCCACAAACACAAGGGGTA...CCCTGTCGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTCCGGATGTAGTCAGGAACTGTGTAAACACAAGTACGAATCTGCTCTTAGCATACTCTTTGGGGCATaGGGGCAATGTGTTTGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSGCSQELCKHKYESALSILFGA*GQCVCN Trigger: ATTACAAACACATTGCCCCCATGCCCCAAAGAGTAT...GCTAAGAGCAGATTCGTACTTGTGTTTACACAGTTCCTGACTACATCCGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CCA 90 bp | AATTACAGTAAAACACAAGGTCAAAAGAGAGTAAGAATCACTGTGGAAGAGAGGGTGACAAAGCACACATaGGGTTCAGAAAGAGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: NYSKTQGQKRVRITVEERVTKHT*GSERDN Trigger: ATTGTCTCTTTCTGAACCCCATGTGTGCTTTGTCAC...CCTCTCTTCCACAGTGATTCTTACTCTCTTTTGACCTTGTGTTTTACTGTAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR TCA 90 bp | AATTACAGTAAAACACAAGGTCAAAAGAGAGTAAGAATCACTGTGGAAGAGAGGAGTTTAAGAGCTGTGTaGAATCAGCTGCTGTTAATG | + |
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Preference number: 2 (lower is better) Translates to: NYSKTQGQKRVRITVEERSLRAV*NQLLLM Trigger: CATTAACAGCAGCTGATTTCACACAGCTCTTAAACT...CCTCTCTTCCACAGTGATTCTTACTCTCTTTTGACCTTGTGTTTTACTGTAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR TCA 72 bp | CTGAGAAATTTGAGGAGAGTGTCAGGGAGTGGAGTGTaGCAAAGCACACATGGGGTTCAGAAAGAGACAATT | + |
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Preference number: 3 (lower is better) Translates to: LRNLRRVSGSGV*QSTHGVQKETI Trigger: AATTGTCTCTTTCTGAACCCCATGTGTGCTTTGTCACACTCCACTCCCTGACACTCTCCTCAAATTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR CCA 72 bp | CTCATATCTGAGAAATTTGAGGAGAGTGTCAGGGAGTaGAGTGTGACAAAGCACACATGGGGTTCAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: LISEKFEESVRE*SVTKHTWGSER Trigger: TCTTTCTGAACCCCATGTGTGCTTTGTCACACTCCACTCCCTGACACTCTCCTCAAATTTCTCAGATATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR CCA 72 bp | AAGAGAGGATGGAAAGAGTGTAACGGCCAGAGAACCTaGAGGAACTCTTCAAAACAATGTCTTCTGGATACG | + |
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Preference number: 3 (lower is better) Translates to: KRGWKECNGQRT*RNSSKQCLLDT Trigger: CGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCCGTTACACTCTTTCCATCCTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CAA 90 bp | AACGGCCAGAGAACCTGGAGGAACTCTTCAAAACAATGTCTTCTGGATACGACATCATATCTGAGAAATTaGAGGAGAGTGTCAGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: NGQRTWRNSSKQCLLDTTSYLRN*RRVSGS Trigger: ACTCCCTGACACTCTCCTCAAATTTCTCAGATATGA...TGTCGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCCGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR GCA 72 bp | GACAGTTACCACCTAGTCTTTTATCACCACCATCAGTaGTCTGTGTTGTGCATAACTACATGTGCTATACTC | + |
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Preference number: 3 (lower is better) Translates to: DSYHLVFYHHHQ*SVLCITTCAIL Trigger: GAGTATAGCACATGTAGTTATGCACAACACAGAGCACTGATGGTGGTGATAAAAGACTAGGTGGTAACTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGATACAGTTCACCATGAGAAAAGATTCAAAAAGGACTGTCACACATATCTCCATGTGCTATACTCTTaGGGGCATGGGGGCAATGTG | + |
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Preference number: 3 (lower is better) Translates to: KDTVHHEKRFKKDCHTYLHVLYS*GHGGNV Trigger: CACATTGCCCCCATGCCCCAAAGAGTATAGCACATG...GAGATATGTGTGACAGTCCTTTTTGAATCTTTTCTCATGGTGAACTGTATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR TCA 72 bp | CTCTCTTCCATAGTGCTGCACAGACTTTTGGAATCATaGATCCTGAAAGATACAGTTCACCATGAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: LSSIVLHRLLES*ILKDTVHHEKR Trigger: TCTTTTCTCATGGTGAACTGTATCTTTCAGGATTCATGATTCCAAAAGTCTGTGCAGCACTATGGAAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR TCA 72 bp | CCCATAGAAACGGTTGTCTTGTATGCCATCTGTCATTaGCTAAACCATCATTCTGAGGCATGTGTTATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PIETVVLYAICH*LNHHSEACVIK Trigger: TTTTATAACACATGCCTCAGAATGATGGTTTAGTCAATGACAGATGGCATACAAGACAACCGTTTCTATGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR CCA 72 bp | AACACCCTACTATTCAATCCATACCCCTTGTGTTTGTaGGGAATATTAGAATCAGTAGGAGATATCTATTTG | + |
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Preference number: 3 (lower is better) Translates to: NTLLFNPYPLCL*GILESVGDIYL Trigger: CAAATAGATATCTCCTACTGATTCTAATATTCCCCACAAACACAAGGGGTATGGATTGAATAGTAGGGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR TCA 72 bp | TTTGGAATCATGAATCCTGAAAGATACAGTTCACCATaGGAAAAGATTCAAAAAGGACTGTCACACATATCT | + |
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Preference number: 3 (lower is better) Translates to: FGIMNPERYSSP*EKIQKGLSHIS Trigger: AGATATGTGTGACAGTCCTTTTTGAATCTTTTCTCATGGTGAACTGTATCTTTCAGGATTCATGATTCCAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGAGAACCTGGAGGAACTCTTCAAAACAATGTCTTCTGGATACGACAGGGGACCCTGATGATGGCTaGCACAATGCGGATATAAGA | + |
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Preference number: 4 (lower is better) Translates to: GQRTWRNSSKQCLLDTTGDPDDG*HNADIR Trigger: TCTTATATCCGCATTGTGTCAGCCATCATCAGGGTC...CCCTGTCGTATCCAGAAGACATTGTTTTGAAGAGTTCCTCCAGGTTCTCTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | GGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGTGTTGCTGCTGTGGCTaGTCTGACAGTCCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GVQKETIEVDISKRSSEECCCCG*SDSPQR Trigger: CCTCTGGGGACTGTCAGAGCAGCCACAGCAGCAACA...CTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | ACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACATCTGTTGCTGCTGTGGCTaGTCTGACAGTCCCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TIEVDISKRSSEEQIEDICCCCG*SDSPQR Trigger: CCTCTGGGGACTGTCAGAGCAGCCACAGCAGCAACA...GATGTCCTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | GGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGGGGCCTTGGGCACTATaGTGGAGACGAGGAGTATGT | + |
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Preference number: 4 (lower is better) Translates to: GVQKETIEVDISKRSSEEGPWAL*WRRGVC Trigger: ACATACTCCTCGTCTCCACCATAGTGCCCAAGGCCC...CTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | ACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACATCGCCTTACGCCTTCCTTaGGCAGAAGGGACCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: TIEVDISKRSSEEQIEDIALRLP*AEGTLM Trigger: CATCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGC...GATGTCCTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | AGATGTCATGAATTTGAAAGTGGAATGTGGGGAACATTGGAGAAAGGGGATGGGCATAGGAGATGGTCCTaGTTTGGGTGTGGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: RCHEFESGMWGTLEKGDGHRRWS*FGCGCS Trigger: TGAACATCCACACCCAAAGCAGGACCATCTCCTATG...CCCATCCCCTTTCTCCAATGTTCCCCACATTCCACTTTCAAATTCATGACATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGCCTTACGCCTTCCTTaGGCAGAAGGGACCCTGATG | + |
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Preference number: 4 (lower is better) Translates to: QKETIEVDISKRSSEEQIALRLP*AEGTLM Trigger: CATCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGC...AATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | GAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACGGAGGAACTCAAAGGTaGTGGTCTGGTTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ETIEVDISKRSSEEQIEDGGTQR*WSGFLL Trigger: CAAGAGGAAACCAGACCAGCACCTTTGAGTTCCTCC...GTCCTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | AAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGGGCCTTGGGCACTATaGTGGAGACGAGGAGTATGT | + |
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Preference number: 4 (lower is better) Translates to: KETIEVDISKRSSEEQIEGPWAL*WRRGVC Trigger: ACATACTCCTCGTCTCCACCATAGTGCCCAAGGCCC...CTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGGGCCTTGGGCACTATaGTGGAGACGAGGAGTATGT | + |
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Preference number: 4 (lower is better) Translates to: QKETIEVDISKRSSEEQIGPWAL*WRRGVC Trigger: ACATACTCCTCGTCTCCACCATAGTGCCCAAGGCCC...AATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR CAA 72 bp | CACCTAGTCTTTTATCACCACCATCAGTGCTCTGTGTaGTGCATAACTACATGTGCTATACTCTTTGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: HLVFYHHHQCSV*CITTCAILFGA Trigger: TGCCCCAAAGAGTATAGCACATGTAGTTATGCACAACACAGAGCACTGATGGTGGTGATAAAAGACTAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | CAAAGCACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGAGGAGGAACTCAAAGGTaGTGGTCTGGTTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QSTHGVQKETIEVDISKRGGTQR*WSGFLL Trigger: CAAGAGGAAACCAGACCAGCACCTTTGAGTTCCTCC...TCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | AGCACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCAAGAGAATGTGTTGCTaGTGTGGCTGCTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: STHGVQKETIEVDISKRSKRMCC*CGCSDS Trigger: ACTGTCAGAGCAGCCACAGCAGCAACACATTCTCTT...GGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | GAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACAAGAGAATGTGTTGCTaGTGTGGCTGCTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: ETIEVDISKRSSEEQIEDKRMCC*CGCSDS Trigger: ACTGTCAGAGCAGCCACAGCAGCAACACATTCTCTT...GTCCTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | ACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACATCGAGATGGTCCTGCTTTaGGTGTGGATGTTCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: TIEVDISKRSSEEQIEDIEMVLL*VWMFTR Trigger: CCTAGTGAACATCCACACCCAAAGCAGGACCATCTC...GATGTCCTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | CATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGATGGTCCTGCTTTaGGTGTGGATGTTCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: HGVQKETIEVDISKRSSEEMVLL*VWMFTR Trigger: CCTAGTGAACATCCACACCCAAAGCAGGACCATCTC...TTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | CAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGGAGGAACTCAAAGGTaGTGGTCTGGTTTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKETIEVDISKRSSEEQIGGTQR*WSGFLL Trigger: CAAGAGGAAACCAGACCAGCACCTTTGAGTTCCTCC...AATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | ACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCACATAGGAGATGGTCCTaGTTTGGGTGTGGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: THGVQKETIEVDISKRSSHRRWS*FGCGCS Trigger: TGAACATCCACACCCAAAGCAGGACCATCTCCTATG...TGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | GAATCATTTTCACTTTCCTCATATCTGAGAAATTTGAGGAGAGTGTCAGGGAGTCATAGGAGATGGTCCTaGTTTGGGTGTGGATGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ESFSLSSYLRNLRRVSGSHRRWS*FGCGCS Trigger: TGAACATCCACACCCAAAGCAGGACCATCTCCTATG...ACTCCCTGACACTCTCCTCAAATTTCTCAGATATGAGGAAAGTGAAAATGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACCCTGATGATGGCTaGCACAATGCGGATATAAGA | + |
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Preference number: 4 (lower is better) Translates to: KETIEVDISKRSSEEQIEDPDDG*HNADIR Trigger: TCTTATATCCGCATTGTGTCAGCCATCATCAGGGTC...CTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | AATTACAGTAAAACACAAGGTCAAAAGAGAGTAAGAATCACTGTGGAAGAGAGGAAGAGAATGTGTTGCTaGTGTGGCTGCTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: NYSKTQGQKRVRITVEERKRMCC*CGCSDS Trigger: ACTGTCAGAGCAGCCACAGCAGCAACACATTCTCTT...CCTCTCTTCCACAGTGATTCTTACTCTCTTTTGACCTTGTGTTTTACTGTAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | AGCACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCGAGAATTCTGACCAGTaGTCCCTTCATGTCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: STHGVQKETIEVDISKRSENSDQ*SLHVFV Trigger: AACAAAGACATGAAGGGAGCACTGGTCAGAATTCTC...GGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | ACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGTCACAGAAGAAGTCTaGAATGACCTTCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: THGVQKETIEVDISKRSSVTEEV*NDLLRA Trigger: TGCTCTCAGAAGGTCATTCCAGACTTCTTCTGTGAC...TGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | CATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGTCACAGAAGAAGTCTaGAATGACCTTCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: HGVQKETIEVDISKRSSEVTEEV*NDLLRA Trigger: TGCTCTCAGAAGGTCATTCCAGACTTCTTCTGTGAC...TTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CCA 90 bp | GAATCATTTTCACTTTCCTCATATCTGAGAAATTTGAGGAGAGTGTCAGGGAGTGTCACAGAAGAAGTCTaGAATGACCTTCTGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: ESFSLSSYLRNLRRVSGSVTEEV*NDLLRA Trigger: TGCTCTCAGAAGGTCATTCCAGACTTCTTCTGTGAC...ACTCCCTGACACTCTCCTCAAATTTCTCAGATATGAGGAAAGTGAAAATGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR TCA 90 bp | AGCACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTATAAGACACAAGGATaGGCAAAAGGGGGATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: STHGVQKETIEVDISKRSYKTQG*AKGGLR Trigger: TCTTAATCCCCCTTTTGCTCATCCTTGTGTCTTATA...GGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR GCA 90 bp | GAATCATTTTCACTTTCCTCATATCTGAGAAATTTGAGGAGAGTGTCAGGGAGTGAGAATTCTGACCAGTaGTCCCTTCATGTCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ESFSLSSYLRNLRRVSGSENSDQ*SLHVFV Trigger: AACAAAGACATGAAGGGAGCACTGGTCAGAATTCTC...ACTCCCTGACACTCTCCTCAAATTTCTCAGATATGAGGAAAGTGAAAATGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| 3UTR CAA 72 bp | GCCAACACCCTACTATTCAATCCATACCCCTTGTGTTaGTGGGGAATATTAGAATCAGTAGGAGATATCTAT | + |
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Preference number: 4 (lower is better) Translates to: ANTLLFNPYPLC*WGILESVGDIY Trigger: ATAGATATCTCCTACTGATTCTAATATTCCCCACAAACACAAGGGGTATGGATTGAATAGTAGGGTGTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR TCA 90 bp | AATTACAGTAAAACACAAGGTCAAAAGAGAGTAAGAATCACTGTGGAAGAGAGGTATAAGACACAAGGATaGGCAAAAGGGGGATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: NYSKTQGQKRVRITVEERYKTQG*AKGGLR Trigger: TCTTAATCCCCCTTTTGCTCATCCTTGTGTCTTATA...CCTCTCTTCCACAGTGATTCTTACTCTCTTTTGACCTTGTGTTTTACTGTAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGTATAAGACACAAGGATaGGCAAAAGGGGGATTAAGA | + |
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Preference number: 4 (lower is better) Translates to: KETIEVDISKRSSEEQIEYKTQG*AKGGLR Trigger: TCTTAATCCCCCTTTTGCTCATCCTTGTGTCTTATA...CTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS CCA 90 bp | TGGTCCTGCTTTGGGTGTGGATGTTCACTAGGGCCTTGGGCACTATaGTGGAGACGAGGAGTATGTCATCACAGGACAGGCTGGCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: WSCFGCGCSLGPWAL*WRRGVCHHRTGWQG Trigger: TCCTTGCCAGCCTGTCCTGTGATGACATACTCCTCGTCTCCACCATAGTGCCCAAGGCCCTAGTGAACATCCACACCCAAAGCAGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CAA 90 bp | AGATGTCATGAATTTGAAAGTGGAATGTGGGGAACATTGGAGAAAGGGGATGGGGGCCTTACGCCTTCCTaGGGCAGAAGGGACCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: RCHEFESGMWGTLEKGDGGLTPS*GRRDPD Trigger: ATCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGCC...CCCATCCCCTTTCTCCAATGTTCCCCACATTCCACTTTCAAATTCATGACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CAA 90 bp | ACACATGGGGTTCAGAAAGAGACAATTGAGGTAGACATTTCTAAAAGATCCTCAGGCCTTACGCCTTCCTaGGGCAGAAGGGACCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: THGVQKETIEVDISKRSSGLTPS*GRRDPD Trigger: ATCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGCC...TGAGGATCTTTTAGAAATGTCTACCTCAATTGTCTCTTTCTGAACCCCATGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS-3UTR CAA 90 bp | ACAATTGAGGTAGACATTTCTAAAAGATCCTCAGAAGAGCAGATTGAGGACATCGGCCTTACGCCTTCCTaGGGCAGAAGGGACCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: TIEVDISKRSSEEQIEDIGLTPS*GRRDPD Trigger: ATCAGGGTCCCTTCTGCCCAAGGAAGGCGTAAGGCC...GATGTCCTCAATCTGCTCTTCTGAGGATCTTTTAGAAATGTCTACCTCAATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS CCA 72 bp | TGGTCCTGCTTTGGGTGTGGATGTTCACTAGGGCCTTaGGCACTATGGTGGAGACGAGGAGTATGTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: WSCFGCGCSLGP*ALWWRRGVCHH Trigger: GTGATGACATACTCCTCGTCTCCACCATAGTGCCCAAGGCCCTAGTGAACATCCACACCCAAAGCAGGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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| CDS CAA 72 bp | ATGGTCCTGCTTTGGGTGTGGATGTTCACTAGGGCCTaGGGCACTATGGTGGAGACGAGGAGTATGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: MVLLWVWMFTRA*GTMVETRSMSS Trigger: TGATGACATACTCCTCGTCTCCACCATAGTGCCCAAGGCCCTAGTGAACATCCACACCCAAAGCAGGACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133561.6 ENSMUST00000214303.2 ENSMUST00000217016.2 |
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