Pregenerated sensors for OLFR398 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049041Ensembl transcript IDs: ENSMUST00000053874.2, ENSMUST00000117510.4, ENSMUST00000214334.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACACGGCCCCCAATAGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMPGPSKHRSG*SQSAIGWITRPPIE Trigger: CTCTATTGGGGGCCGTGTGATCCATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CCA 90 bp | CAGTACCCCAGAGCCAGAGTCTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGC | + |
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Preference number: 1 (lower is better) Translates to: QYPRARVSSCICIKR*PSRPSLQREAHWTC Trigger: GCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGACTCTGGCTCTGGGGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 90 bp | AGCTTCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCTAGATATAGCTGTCTCTTGTGAGACTATGCCGGGG | + |
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Preference number: 1 (lower is better) Translates to: SFQTLTPLHTLARFC*KDLDIAVSCETMPG Trigger: CCCCGGCATAGTCTCACAAGAGACAGCTATATCTAGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CCA 90 bp | GAGACTGAGTTTCCAGAAGCTGTAGTGACAAGAGCTCAGACTCTGTaGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAG | + |
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Preference number: 1 (lower is better) Translates to: ETEFPEAVVTRAQTL*QQLRLEPKAKFKTQ Trigger: CTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGAGTCTGAGCTCTTGTCACTACAGCTTCTGGAAACTCAGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR GCA 90 bp | GTTAAAAGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTaGATGGCTGTGACTGTCATCCTGGCACAAACTCTCCCATATGAC | + |
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Preference number: 1 (lower is better) Translates to: VKSTFKSSRSIPGRA*MAVTVILAQTLPYD Trigger: GTCATATGGGAGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCTTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 90 bp | ATAGTGGAAAGGTGGATAGAATATACAACTATTCATCATAGAAAGTaGACTCCTTGGGCTTCTGACATGGGGACAGCCTCTAGTCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: IVERWIEYTTIHHRK*TPWASDMGTASSLN Trigger: ATTGAGACTAGAGGCTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTATATTCTATCCACCTTTCCACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 90 bp | AAACTGCAGAATAATATACAGAGAAGCTGGGATGACAGTGGAGGCTaGTTTGGGTGGGTAAAGAAGAATTTCATCTCTTTGAACATTAAC | + |
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Preference number: 1 (lower is better) Translates to: KLQNNIQRSWDDSGG*FGWVKKNFISLNIN Trigger: GTTAATGTTCAAAGAGATGAAATTCTTCTTTACCCACCCAAATCAGCCTCCACTGTCATCCCAGCTTCTCTGTATATTATTCTGCAGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCACAAACAGATCATCACTAAATGCCCATTCTACCCTGTAGTAGTGAAAAGGGAGCCTGCATGGCTGTaGCTGTCATCCTGGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: CHKQIITKCPFYPVVVKREPAWL*LSSWHK Trigger: TTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTC...CCTTTTCACTACTACAGGGTAGAATGGGCATTTAGTGATGATCTGTTTGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CCA 90 bp | GATAGTAGAAGAAGAAAATCAACTCCTGCAAGTAGCCCTCTGGACTACACATGCATCACAGTCAGCTATTaGATGGATCACACGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: DSRRRKSTPASSPLDYTCITVSY*MDHTAP Trigger: GGGGGCCGTGTGATCCATCCAATAGCTGACTGTGAT...GCATGTGTAGTCCAGAGGGCTACTTGCAGGAGTTGATTTTCTTCTTCTACTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTATCACAGTCAGCTATTaGATGGATCACACGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: STFKSSRSIPGRACMAVTITVSY*MDHTAP Trigger: GGGGGCCGTGTGATCCATCCAATAGCTGACTGTGAT...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTGTCATCCTGGCACAAACTCTGCCAGAGTCTCTAGCTaGATATGTATCAAAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: KYSRKSLHGCDCHPGTNSARVSS*ICIKRW Trigger: CCATCTTTTGATACATATGCAGCTAGAGACTCTGGC...AGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCAGGTCCCATCAACAATGATTATAGGACACCCTTTCCAAAAGTCAAGATGACTCAGAAATCTGCCTaGCTCTGCCTCCAAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VSGPINNDYRTPFPKVKMTQKSA*LCLQVL Trigger: CAGCACTTGGAGGCAGAGGCAGGCAGATTTCTGAGT...CATCTTGACTTTTGGAAAGGGTGTCCTATAATCATTGTTGATGGGACCTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGTGGTTTTTCGAGACATaGTTTCTCTGTGTAGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: SVATIKTGAQSQIQDTAEWFFET*FLCVAR Trigger: CCGGGCTACACAGAGAAACCATGTCTCGAAAAACCA...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CAA 90 bp | AAATTCAAGACACAGCTGAGTGCAATAGGTAGATCCACAGGACTCTaGAGATCTGAGAGGGTCATTAACCCCATCCTCCAAGGACAATCA | + |
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Preference number: 2 (lower is better) Translates to: KFKTQLSAIGRSTGL*RSERVINPILQGQS Trigger: TGATTGTCCTTGGAGGATGGGGTTAATGACCCTCTCAGATCTCAAGAGTCCTGTGGATCTACCTATTGCACTCAGCTGTGTCTTGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGGTACTCTTCTTGACATaGCAGTTAACCCAGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: SVATIKTGAQSQIQDTAEVLFLT*QLTQTF Trigger: GAAGGTCTGGGTTAACTGGCATGTCAAGAAGAGTAC...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTGTCCAGTGGTTCCCTTCCCAGAGTAGGAAGGTTTCTACAAAAGCCATATTCATGGACTCCCATGTaGATGGTGTACTTAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: YVSSGSLPRVGRFLQKPYSWTPM*MVYLGQ Trigger: CTGTCCTAAGTACACCATGCACATGGGAGTCCATGA...ATATGGCTTTTGTAGAAACCTTCCTACTCTGGGAAGGGAACCACTGGACACATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTGTACTCTTCTTGACATaGCAGTTAACCCAGACCTTC | + |
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Preference number: 2 (lower is better) Translates to: STFKSSRSIPGRACMAVTVLFLT*QLTQTF Trigger: GAAGGTCTGGGTTAACTGGCATGTCAAGAAGAGTAC...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGGGAGCTAAAGGGAACTaGAACCCTATAGGTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: IQLFIIESELLGLLTWGQGAKGN*NPIGGT Trigger: AGTTCCACCTATAGGGTTGCAGTTCCCTTTAGCTCC...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGTTGAACTCAGAAATCTaGCTGCCTCTGCCTCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: IQLFIIESELLGLLTWGQLNSEI*LPLPPS Trigger: ACTTGGAGGCAGAGGCAGGCAGATTTCTGAGTTCAA...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGCAGTGGAGGCTGATTTaGGTGGGTAAAGAAGAATTT | + |
|
Preference number: 2 (lower is better) Translates to: SVATIKTGAQSQIQDTAEQWRLI*VGKEEF Trigger: AAATTCTTCTTTACCCACCCAAATCAGCCTCCACTG...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGA | + |
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Preference number: 2 (lower is better) Translates to: STFKSSRSIPGRACMAVTKHRSG*SQSAIG Trigger: TCCAATAGCTGACTGTGATCATCCACTTCTGTGTTT...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCATTCCAGGAAGAGCCTaGATGGCTGTGACTGTCATC | + |
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Preference number: 2 (lower is better) Translates to: DGLSSILRNQIVEEENQLIPGRA*MAVTVI Trigger: GATGACAGTCACAGCCATGCAGGCTCTTCCTGGAAT...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCAAATCTGCCTGCCTCTaGCTCCAAGTGCTGGGATTA | + |
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Preference number: 2 (lower is better) Translates to: DGLSSILRNQIVEEENQLKSACL*LQVLGL Trigger: TAATCCCAGCACTTGGAGGCAGAGGCAGGCAGATTT...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTAACACTAGACTATTTTaGGCATCCAGACAACACACA | + |
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Preference number: 2 (lower is better) Translates to: STFKSSRSIPGRACMAVTNTRLF*ASRQHT Trigger: TGTGTGTTGTCTGGATGCTCAAAATAGTCTAGTGTT...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCAGGTCCCATCAACAATGATTATAGGACACCCTTTCCAAAAGTCAAGATGAACACTAGACTATTTTaGGCATCCAGACAACACACA | + |
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Preference number: 2 (lower is better) Translates to: VSGPINNDYRTPFPKVKMNTRLF*ASRQHT Trigger: TGTGTGTTGTCTGGATGCTCAAAATAGTCTAGTGTT...CATCTTGACTTTTGGAAAGGGTGTCCTATAATCATTGTTGATGGGACCTGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CAA 90 bp | GTCCTCTGTTTCAAGGATGAAAGGACAATAAGTTTATCCAGATATTaGAGATATCGAAAGGGGATGGCAAGCTCACTTTATGTGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VLCFKDERTISLSRY*RYRKGMASSLYVSS Trigger: ACTGGACACATAAAGTGAGCTTGCCATCCCCTTTCGATATCTCAAATATCTGGATAAACTTATTGTCCTTTCATCCTTGAAACAGAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCTTCCATTCTTTGGGGTaGTTAATGCAGAAGATAAGC | + |
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Preference number: 2 (lower is better) Translates to: DGLSSILRNQIVEEENQLFHSLG*LMQKIS Trigger: GCTTATCTTCTGCATTAACCACCCCAAAGAATGGAA...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCGCAGAAGATAAGCTTTaGCAAGTAGAACAACACAAA | + |
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Preference number: 2 (lower is better) Translates to: DGLSSILRNQIVEEENQLAEDKL*QVEQHK Trigger: TTTGTGTTGTTCTACTTGCCAAAGCTTATCTTCTGC...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 72 bp | GAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACACGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ETMPGPSKHRSG*SQSAIGWITRP Trigger: GGGCCGTGTGATCCATCCAATAGCTGACTGTGATCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 72 bp | GGCTGTGACTGTCATCCTGGCACAAACTCTCCCATATaGCCGCCTTCCAGCCTCTCCATTCACCTGTTGATA | + |
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Preference number: 3 (lower is better) Translates to: GCDCHPGTNSPI*PPSSLSIHLLI Trigger: TATCAACAGGTGAATGGAGAGGCTGGAAGGCGGTCATATGGGAGAGTTTGTGCCAGGATGACAGTCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CCA 72 bp | TGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTaGACTTGCAAACTTTATATGCCCCAGTACAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: WPSRPSLQREAH*TCKLYMPQYRG Trigger: TCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAGAGTTGGTACTCTTCTaGACATGCCAGTTAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: SKDGLVGHHCKERPIGLAELVLF*TCQLTQ Trigger: CTGGGTTAACTGGCATGTCAAGAAGAGTACCAACTC...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTGTCATCCTGGCACAAACTCTGCAAAGAGAGGCCCATaGGACTTGCAAACTTTATAT | + |
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Preference number: 3 (lower is better) Translates to: KYSRKSLHGCDCHPGTNSAKRGP*DLQTLY Trigger: ATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGC...AGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CCA 72 bp | TCGAAAGGGGATGGCAAGCTCACTTTATGTGTCCAGTaGTTCCCTTCCCAGAGTAGGAAGGTTTCTACAAAA | + |
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Preference number: 3 (lower is better) Translates to: SKGDGKLTLCVQ*FPSQSRKVSTK Trigger: TTTTGTAGAAACCTTCCTACTCTGGGAAGGGAACCACTGGACACATAAAGTGAGCTTGCCATCCCCTTTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | GATAGTAGAAGAAGAAAATCAACTCCTGCAAGTAGCCCTCTGGACTACACATGCGAGTTGGTACTCTTCTaGACATGCCAGTTAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: DSRRRKSTPASSPLDYTCELVLF*TCQLTQ Trigger: CTGGGTTAACTGGCATGTCAAGAAGAGTACCAACTC...GCATGTGTAGTCCAGAGGGCTACTTGCAGGAGTTGATTTTCTTCTTCTACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATAAATGAGACTGTGTaGATTTGGGAGTTGGTACTC | + |
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Preference number: 3 (lower is better) Translates to: WPSRPSLQREAHWTCKLYINETV*IWELVL Trigger: GAGTACCAACTCCCAAATCAACACAGTCTCATTTAT...ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | ATCACACGGCCCCCAATAGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAATAAATGAGACTGTGTaGATTTGGGAGTTGGTACTC | + |
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Preference number: 3 (lower is better) Translates to: ITRPPIEELEKLPKELKGINETV*IWELVL Trigger: GAGTACCAACTCCCAAATCAACACAGTCTCATTTAT...TCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCTATTGGGGGCCGTGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 72 bp | CCTCTAGTCTCAATCTGTTTCCTGTGTTGTACAGTGTaGATTCCTCATGGACTCCCATGTGCATGGTGTACT | + |
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Preference number: 3 (lower is better) Translates to: PLVSICFLCCTV*IPHGLPCAWCT Trigger: AGTACACCATGCACATGGGAGTCCATGAGGAATTCACACTGTACAACACAGGAAACAGATTGAGACTAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR GCA 72 bp | ACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTaGATGGCTGTGACTGTCATCCTGGCACAAACTCTC | + |
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Preference number: 3 (lower is better) Translates to: TFKSSRSIPGRA*MAVTVILAQTL Trigger: GAGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR CCA 72 bp | TTTCCAGAAGCTGTAGTGACAAGAGCTCAGACTCTGTaGCAACAATTAAGACTGGAGCCCAAAGCCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: FPEAVVTRAQTL*QQLRLEPKAKF Trigger: GAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGAGTCTGAGCTCTTGTCACTACAGCTTCTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR TCA 72 bp | ACGCTGACACCATTGCATACACTAGCAAGATTTTGCTaGAAGGACCTAGATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: TLTPLHTLARFC*KDLDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCTAGGTCCTTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGTACACTAGCAAGATTTaGCTGAAAGGACCTAGATAT | + |
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Preference number: 3 (lower is better) Translates to: SVATIKTGAQSQIQDTAEYTSKI*LKGPRY Trigger: ATATCTAGGTCCTTTCAGCAAAATCTTGCTAGTGTA...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | TATGTGTCCAGTGGTTCCCTTCCCAGAGTAGGAAGGTTTCTACAAAAGCCATATCTCTCCATTCACCTGTaGATATTACTTGCTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: YVSSGSLPRVGRFLQKPYLSIHL*ILLAFC Trigger: ACAGAAAGCAAGTAATATCAACAGGTGAATGGAGAG...ATATGGCTTTTGTAGAAACCTTCCTACTCTGGGAAGGGAACCACTGGACACATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGCTCTCCATTCACCTGTaGATATTACTTGCTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: IQLFIIESELLGLLTWGQLSIHL*ILLAFC Trigger: ACAGAAAGCAAGTAATATCAACAGGTGAATGGAGAG...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| 3UTR-3UTR CAA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGAATCTGTTTCCTGTGTaGTACAGTGTGAATTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: IQLFIIESELLGLLTWGQNLFPV*YSVNSS Trigger: TGAGGAATTCACACTGTACAACACAGGAAACAGATT...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| 3UTR TCA 72 bp | AAACAAAAAGAATCTCCAAGCAACACTAGACTATTTTaGGCATCCAGACAACACACAAAGGCATCCAATACA | + |
|
Preference number: 3 (lower is better) Translates to: KQKESPSNTRLF*ASRQHTKASNT Trigger: TGTATTGGATGCCTTTGTGTGTTGTCTGGATGCTCAAAATAGTCTAGTGTTGCTTGGAGATTCTTTTTGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAATGGCCTGGCCAGGATaGAGCAAGGTGGCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLAMAWPG*SKVASS Trigger: ACTGCTGGCCACCTTGCTCCATCCTGGCCAGGCCAT...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR TCA 90 bp | GTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCGGCAGTCTCTGCAGCTaGTGTGTCAGAGGTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGHHCKERPIGLANFICPGSLCS*CVRGCQ Trigger: TTGGCAACCTCTGACACATCAGCTGCAGAGACTGCC...GGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCATGGAAGGATATGGCCTaGCCAGGATGGAGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLAWKDMA*PGWSKV Trigger: CACCTTGCTCCATCCTGGCCAGGCCATATCCTTCCA...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAGCCCCTCTGAGAAGATaGCAGTCTCTGCAGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLAAPLRR*QSLQLM Trigger: CATCAGCTGCAGAGACTGCCATCTTCTCAGAGGGGC...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTGTCATCCTGGCACAAACTCTGGCAGTCTCTGCAGCTaGTGTGTCAGAGGTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KYSRKSLHGCDCHPGTNSGSLCS*CVRGCQ Trigger: TTGGCAACCTCTGACACATCAGCTGCAGAGACTGCC...AGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAGACCACACTGGCCATaGGGTCATAACGAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLARPHWP*GHNELS Trigger: ACTCAGCTCGTTATGACCGCATGGCCAGTGTGGTCT...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGCAGGATGGAGCAAGGTaGCCAGCAGTCTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SVATIKTGAQSQIQDTAEQDGAR*PAVWGQ Trigger: CTGTCCCCAGACTGCTGGCCACCTTGCTCCATCCTG...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATAAGCCTGGAAGGATATaGCCTGGCCAGGATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPSRPSLQREAHWTCKLYKPGRI*PGQDGA Trigger: TGCTCCATCCTGGCCAGGCCATATCCTTCCAGGCTT...ATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCATGGGCAAAACAAGCCTaGAAGGATATGGCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLAWAKQA*KDMAWP Trigger: TGGCCAGGCCATATCCTTCCAGGCTTGTTTTGCCCA...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAGAAGGTAGCTCTCGGTaGTACCCAGAGCTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLAEGSSR*YPELQR Trigger: TCTTTGTAGCTCTGGGTATCACCGAGAGCTACCTTC...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | ATCACACGGCCCCCAATAGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAGTATGTAGAAGAGAGTaGAGATGGGCCACAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITRPPIEELEKLPKELKGVCRRE*RWATAQ Trigger: CTGGGCTGTGGCCCATCTGCACTCTCTTCTACATAC...TCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCTATTGGGGGCCGTGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTATGGCCTGGCCAGGATaGAGCAAGGTGGCCAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: STFKSSRSIPGRACMAVTMAWPG*SKVASS Trigger: ACTGCTGGCCACCTTGCTCCATCCTGGCCAGGCCAT...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | GTGTCAGGTCCCATCAACAATGATTATAGGACACCCTTTCCAAAAGTCAAGATGCAGGATGGAGCAAGGTaGCCAGCAGTCTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VSGPINNDYRTPFPKVKMQDGAR*PAVWGQ Trigger: CTGTCCCCAGACTGCTGGCCACCTTGCTCCATCCTG...CATCTTGACTTTTGGAAAGGGTGTCCTATAATCATTGTTGATGGGACCTGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTAAAGAAGTGGCGCACTaGGGCAGAGGGAGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: STFKSSRSIPGRACMAVTKEVAH*GRGRVG Trigger: ACCTACCCTCCCTCTGCCCCAGTGCGCCACTTCTTT...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGGCCCCTCTGAGAAGATaGCAGTCTCTGCAGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVATIKTGAQSQIQDTAEAPLRR*QSLQLM Trigger: CATCAGCTGCAGAGACTGCCATCTTCTCAGAGGGGC...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | GATAGTAGAAGAAGAAAATCAACTCCTGCAAGTAGCCCTCTGGACTACACATGCGGCCACAGCCCAGGATaGAGCCACCAACAAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DSRRRKSTPASSPLDYTCGHSPG*SHQQKA Trigger: TGCTTTTTGTTGGTGGCTGCATCCTGGGCTGTGGCC...GCATGTGTAGTCCAGAGGGCTACTTGCAGGAGTTGATTTTCTTCTTCTACTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGGTATGTAGAAGAGAGTaGAGATGGGCCACAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVATIKTGAQSQIQDTAEVCRRE*RWATAQ Trigger: CTGGGCTGTGGCCCATCTGCACTCTCTTCTACATAC...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | ATCACACGGCCCCCAATAGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGATTACTCATCTTGGGGTaGTGCTCTCCATCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ITRPPIEELEKLPKELKGLLILG*CSPSET Trigger: GGTTTCAGATGGAGAGCAGCACCCCAAGATGAGTAA...TCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCTATTGGGGGCCGTGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | ATCACACGGCCCCCAATAGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAATCAAGCCGAGGAGCTaGAACTGTGGTTTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ITRPPIEELEKLPKELKGIKPRS*NCGLYV Trigger: CACATACAAACCACAGTTCCAGCTCCTCGGCTTGAT...TCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCTATTGGGGGCCGTGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| 3UTR CAA 72 bp | ACACAGCTGAGTGCAATAGGTAGATCCACAGGACTCTaGAGATCTGAGAGGGTCATTAACCCCATCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQLSAIGRSTGL*RSERVINPILQ Trigger: TTGGAGGATGGGGTTAATGACCCTCTCAGATCTCAAGAGTCCTGTGGATCTACCTATTGCACTCAGCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGGAAGGTAGCTCTCGGTaGTACCCAGAGCTACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVATIKTGAQSQIQDTAEEGSSR*YPELQR Trigger: TCTTTGTAGCTCTGGGTATCACCGAGAGCTACCTTC...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGGGCCACAGCCCAGGATaGAGCCACCAACAAAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IQLFIIESELLGLLTWGQGHSPG*SHQQKA Trigger: TGCTTTTTGTTGGTGGCTGCATCCTGGGCTGTGGCC...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGTGGAAGGATATGGCCTaGCCAGGATGGAGCAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQLFIIESELLGLLTWGQWKDMA*PGWSKV Trigger: CACCTTGCTCCATCCTGGCCAGGCCATATCCTTCCA...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAACAAAGAAGTACATCTaGGCAAAACAAGCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLVGHHCKERPIGLATKKYI*AKQAWK Trigger: CTTCCAGGCTTGTTTTGCCCAGATGTACTTCTTTGT...TGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR TCA 90 bp | AAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTGTCATCCTGGCACAAACTCTTTTTTAGGGCACTCTTaGCCTCTTTGTTACGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYSRKSLHGCDCHPGTNSFLGHS*PLCYED Trigger: GTCTTCGTAACAAAGAGGTCAAGAGTGCCCTAAAAA...AGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGGTCCCATCAACAATGATTATAGGACACCCTTTCCAAAAGTCAAGATGAGACCACACTGGCCATaGGGTCATAACGAGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGPINNDYRTPFPKVKMRPHWP*GHNELS Trigger: ACTCAGCTCGTTATGACCGCATGGCCAGTGTGGTCT...CATCTTGACTTTTGGAAAGGGTGTCCTATAATCATTGTTGATGGGACCTGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGGAGGAGCTGGAACTGTaGTTTGTATGTGAGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SVATIKTGAQSQIQDTAEEELEL*FVCEVG Trigger: ACCAACCTCACATACAAACCACAGTTCCAGCTCCTC...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACAAACAGATCATCACTAAATGCCCATTCTACCCTGTAGTAGTGAAAAGGTGGGCAAAACAAGCCTaGAAGGATATGGCCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHKQIITKCPFYPVVVKRWAKQA*KDMAWP Trigger: TGGCCAGGCCATATCCTTCCAGGCTTGTTTTGCCCA...CCTTTTCACTACTACAGGGTAGAATGGGCATTTAGTGATGATCTGTTTGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCAAAGAAGTGGCGCACTaGGGCAGAGGGAGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGLSSILRNQIVEEENQLKEVAH*GRGRVG Trigger: ACCTACCCTCCCTCTGCCCCAGTGCGCCACTTCTTT...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCTCACCAGCACCACCATaGTCAGATTGCCCAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DGLSSILRNQIVEEENQLSPAPP*SDCPGH Trigger: ATGCCCTGGGCAATCTGAGCATGGTGGTGCTGGTGA...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCAGGTCCCATCAACAATGATTATAGGACACCCTTTCCAAAAGTCAAGATGGTCATAAGACATGGCTaGCAGAAGGTAGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGPINNDYRTPFPKVKMVIRHG*QKVALG Trigger: ACCGAGAGCTACCTTCTGGCAGCCATGTCTTATGAC...CATCTTGACTTTTGGAAAGGGTGTCCTATAATCATTGTTGATGGGACCTGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | AGCACATTTAAGTCATCTAGAAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTATCAAGCCGAGGAGCTaGAACTGTGGTTTGTATGTG | + |
|
Preference number: 4 (lower is better) Translates to: STFKSSRSIPGRACMAVTIKPRS*NCGLYV Trigger: CACATACAAACCACAGTTCCAGCTCCTCGGCTTGAT...AGTCACAGCCATGCAGGCTCTTCCTGGAATACTTCTAGATGACTTAAATGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCAGAAACAGCAGCGGGTaGGGATCTGTGCCATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DGLSSILRNQIVEEENQLRNSSG*GSVPSI Trigger: GATGGATGGCACAGATCCCCACCCGCTGCTGTTTCT...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCAAGCCTGGAAGGATATaGCCTGGCCAGGATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGLSSILRNQIVEEENQLKPGRI*PGQDGA Trigger: TGCTCCATCCTGGCCAGGCCATATCCTTCCAGGCTT...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | TGCCACAAACAGATCATCACTAAATGCCCATTCTACCCTGTAGTAGTGAAAAGGTTACTCATCTTGGGGTaGTGCTCTCCATCTGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: CHKQIITKCPFYPVVVKRLLILG*CSPSET Trigger: GGTTTCAGATGGAGAGCAGCACCCCAAGATGAGTAA...CCTTTTCACTACTACAGGGTAGAATGGGCATTTAGTGATGATCTGTTTGTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | ATACAACTATTCATCATAGAAAGTGAACTCCTTGGGCTTCTGACATGGGGACAGGAGGAGCTGGAACTGTaGTTTGTATGTGAGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQLFIIESELLGLLTWGQEELEL*FVCEVG Trigger: ACCAACCTCACATACAAACCACAGTTCCAGCTCCTC...CTGTCCCCATGTCAGAAGCCCAAGGAGTTCACTTTCTATGATGAATAGTTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGCAACAATTAAGACTGGAGCCCAAAGCCAAATTCAAGACACAGCTGAGACAAAGAAGTACATCTaGGCAAAACAAGCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVATIKTGAQSQIQDTAETKKYI*AKQAWK Trigger: CTTCCAGGCTTGTTTTGCCCAGATGTACTTCTTTGT...CTCAGCTGTGTCTTGAATTTGGCTTTGGGCTCCAGTCTTAATTGTTGCCACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCGTCATAAGACATGGCTaGCAGAAGGTAGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGLSSILRNQIVEEENQLVIRHG*QKVALG Trigger: ACCGAGAGCTACCTTCTGGCAGCCATGTCTTATGAC...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| 3UTR CAA 72 bp | TTCAAGGATGAAAGGACAATAAGTTTATCCAGATATTaGAGATATCGAAAGGGGATGGCAAGCTCACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FKDERTISLSRY*RYRKGMASSLY Trigger: ATAAAGTGAGCTTGCCATCCCCTTTCGATATCTCAAATATCTGGATAAACTTATTGTCCTTTCATCCTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS GCA 90 bp | GGTGCCGGCCTCCTGTGGTCCGAATTCCAAGCACTGCCACAAGGATaGGTGCATAGGAAAGGGACACGAGGAGCAGAGGGGTCAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGLLWSEFQALPQG*VHRKGTRGAEGSTP Trigger: TGGTGTTGACCCCTCTGCTCCTCGTGTCCCTTTCCTATGCACGCATCCTTGTGGCAGTGCTTGGAATTCGGACCACAGGAGGCCGGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
||
| CDS GCA 90 bp | GGAGAAGACACGGTGCCGGCCTCCTGTGGTCCGAATTCCAAGCACTaGCACAAGGATGCGTGCATAGGAAAGGGACACGAGGAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEDTVPASCGPNSKH*HKDACIGKGHEEQR Trigger: CCTCTGCTCCTCGTGTCCCTTTCCTATGCACGCATCCTTGTGGCAGTGCTTGGAATTCGGACCACAGGAGGCCGGCACCGTGTCTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS GCA 90 bp | CCGGCCTCCTGTGGTCCGAATTCCAAGCACTGCCACAAGGATGCGTaGATAGGAAAGGGACACGAGGAGCAGAGGGGTCAACACCACTGT | + |
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Preference number: 5 (lower is better) Translates to: PASCGPNSKHCHKDA*IGKGHEEQRGQHHC Trigger: ACAGTGGTGTTGACCCCTCTGCTCCTCGTGTCCCTTTCCTATGCACGCATCCTTGTGGCAGTGCTTGGAATTCGGACCACAGGAGGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS CCA 90 bp | TGCCAAGCTCAGCATTACAGTCATGTCACAAAAGAAGTGGCGCACTaGGGCAGAGGGAGGGTAGGTGAGAGCAGAGATGAGCAGTGTATG | + |
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Preference number: 5 (lower is better) Translates to: CQAQHYSHVTKEVAH*GRGRVGESRDEQCM Trigger: CATACACTGCTCATCTCTGCTCTCACCTACCCTCCCTCTGCCCCAGTGCGCCACTTCTTTTGTGACATGACTGTAATGCTGAGCTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | GTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCACCACCATGCTCAGATaGCCCAGGGCATTGAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: VGHHCKERPIGLANFICPTTMLR*PRALSR Trigger: CCTACTCAATGCCCTGGGCAATCTGAGCATGGTGGT...GGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | AAGTATTCCAGGAAGAGCCTGCATGGCTGTGACTGTCATCCTGGCACAAACTCTCTGATGTGTCAGAGGTaGCCAAGCTCAGCATTACAG | + |
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Preference number: 5 (lower is better) Translates to: KYSRKSLHGCDCHPGTNSLMCQR*PSSALQ Trigger: CTGTAATGCTGAGCTTGGCAACCTCTGACACATCAG...AGAGTTTGTGCCAGGATGACAGTCACAGCCATGCAGGCTCTTCCTGGAATACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | ATCACACGGCCCCCAATAGAGGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAAGCTGGAACTGTGGTTaGTATGTGAGGTTGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: ITRPPIEELEKLPKELKGSWNCG*YVRLVT Trigger: TGTGACCAACCTCACATACAAACCACAGTTCCAGCT...TCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCTATTGGGGGCCGTGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | TGCCACAAACAGATCATCACTAAATGCCCATTCTACCCTGTAGTAGTGAAAAGGACCACCATGCTCAGATaGCCCAGGGCATTGAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: CHKQIITKCPFYPVVVKRTTMLR*PRALSR Trigger: CCTACTCAATGCCCTGGGCAATCTGAGCATGGTGGT...CCTTTTCACTACTACAGGGTAGAATGGGCATTTAGTGATGATCTGTTTGTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | GATAGTAGAAGAAGAAAATCAACTCCTGCAAGTAGCCCTCTGGACTACACATGCAGCTGGAACTGTGGTTaGTATGTGAGGTTGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: DSRRRKSTPASSPLDYTCSWNCG*YVRLVT Trigger: TGTGACCAACCTCACATACAAACCACAGTTCCAGCT...GCATGTGTAGTCCAGAGGGCTACTTGCAGGAGTTGATTTTCTTCTTCTACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | TATGTGTCCAGTGGTTCCCTTCCCAGAGTAGGAAGGTTTCTACAAAAGCCATATCTTTTTAGGGCACTCTaGACCTCTTTGTTACGAAGA | + |
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Preference number: 5 (lower is better) Translates to: YVSSGSLPRVGRFLQKPYLFRAL*TSLLRR Trigger: TCTTCGTAACAAAGAGGTCAAGAGTGCCCTAAAAAG...ATATGGCTTTTGTAGAAACCTTCCTACTCTGGGAAGGGAACCACTGGACACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS-3UTR CAA 90 bp | GATGGCCTGAGTTCTATCCTTAGAAACCAGATAGTAGAAGAAGAAAATCAACTCCTTTTTAGGGCACTCTaGACCTCTTTGTTACGAAGA | + |
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Preference number: 5 (lower is better) Translates to: DGLSSILRNQIVEEENQLLFRAL*TSLLRR Trigger: TCTTCGTAACAAAGAGGTCAAGAGTGCCCTAAAAAG...GAGTTGATTTTCTTCTTCTACTATCTGGTTTCTAAGGATAGAACTCAGGCCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS GCA 72 bp | AGCCACCAACAAAAAGCAGCGCCAGGGTGTCATGACTaGACCATAGTGCAGCGGTCTACACACAGCCACCGC | + |
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Preference number: 6 (lower is better) Translates to: SHQQKAAPGCHD*TIVQRSTHSHR Trigger: GCGGTGGCTGTGTGTAGACCGCTGCACTATGGTGCAGTCATGACACCCTGGCGCTGCTTTTTGTTGGTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS GCA 72 bp | CTCCTGTGGTCCGAATTCCAAGCACTGCCACAAGGATaGGTGCATAGGAAAGGGACACGAGGAGCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LLWSEFQALPQG*VHRKGTRGAEG Trigger: CCCCTCTGCTCCTCGTGTCCCTTTCCTATGCACGCATCCTTGTGGCAGTGCTTGGAATTCGGACCACAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS CCA 72 bp | TACATCTGGGCAAAACAAGCCTGGAAGGATATGGCCTaGCCAGGATGGAGCAAGGTGGCCAGCAGTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: YIWAKQAWKDMA*PGWSKVASSLG Trigger: CCCCAGACTGCTGGCCACCTTGCTCCATCCTGGCCAGGCCATATCCTTCCAGGCTTGTTTTGCCCAGATGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS TCA 72 bp | ATGCAGCCACCAACAAAAAGCAGCGCCAGGGTGTCATaGCTGCACCATAGTGCAGCGGTCTACACACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: MQPPTKSSARVS*LHHSAAVYTQP Trigger: TGGCTGTGTGTAGACCGCTGCACTATGGTGCAGTCATGACACCCTGGCGCTGCTTTTTGTTGGTGGCTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS GCA 72 bp | TGTGGTCCGAATTCCAAGCACTGCCACAAGGATGCGTaGATAGGAAAGGGACACGAGGAGCAGAGGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: CGPNSKHCHKDA*IGKGHEEQRGQ Trigger: TTGACCCCTCTGCTCCTCGTGTCCCTTTCCTATGCACGCATCCTTGTGGCAGTGCTTGGAATTCGGACCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS CCA 72 bp | CAGCATTACAGTCATGTCACAAAAGAAGTGGCGCACTaGGGCAGAGGGAGGGTAGGTGAGAGCAGAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: QHYSHVTKEVAH*GRGRVGESRDE Trigger: CTCATCTCTGCTCTCACCTACCCTCCCTCTGCCCCAGTGCGCCACTTCTTTTGTGACATGACTGTAATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS CCA 72 bp | GCAGAGATGAGCAGTGTATGTAGAAGAGAGTGCAGATaGGCCACAGCCCAGGATGCAGCCACCAACAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: AEMSSVCRRECR*ATAQDAATNKK Trigger: CTTTTTGTTGGTGGCTGCATCCTGGGCTGTGGCCCATCTGCACTCTCTTCTACATACACTGCTCATCTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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| CDS CCA 72 bp | CTCTCGGTGATACCCAGAGCTACAAAGAAGTACATCTaGGCAAAACAAGCCTGGAAGGATATGGCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LSVIPRATKKYI*AKQAWKDMAWP Trigger: TGGCCAGGCCATATCCTTCCAGGCTTGTTTTGCCCAGATGTACTTCTTTGTAGCTCTGGGTATCACCGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053874.2 ENSMUST00000117510.4 ENSMUST00000214334.2 |
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