Pregenerated sensors for OLFR397 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057050Ensembl transcript IDs: ENSMUST00000121280.3, ENSMUST00000213134.2, ENSMUST00000216291.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCCAGAACTCCCAGGGACTAAGACGTCAGCAAAGGAGTACACATaGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: PPELPGTKTSAKEYT*LQLQRMALSGINGR Trigger: CCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGCTGACGTCTTAGTCCCTGGGAGTTCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR GCA 90 bp | TCCCAGGGACTAAGACGTCAGCAAAGGAGTACACATGGCTTCAGCTaGAGAGGATGGCCTTGTCAGGCATCAATGGGAGGAGAGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SQGLRRQQRSTHGFS*RGWPCQASMGGEVL Trigger: AAGGACCTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGCTGACGTCTTAGTCCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR CAA 90 bp | ACGTCAGCAAAGGAGTACACATGGCTTCAGCTGCAGAGGATGGCCTaGTCAGGCATCAATGGGAGGAGAGGTCCTTGGTCCTATGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: TSAKEYTWLQLQRMA*SGINGRRGPWSYEG Trigger: GCCTTCATAGGACCAAGGACCTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGCTGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGAGGAGAGGTCCTCCCCTGCATACCATTTaGAATTGGGCCTACTATTGG | + |
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Preference number: 2 (lower is better) Translates to: WLQLQRMALSGINGRRGPPLHTI*NWAYYW Trigger: CCAATAGTAGGCCCAATTTCAAATGGTATGCAGGGG...AGGACCTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGAGGAGAGCAAACTATTGAAAGTTaGAGAAAGCCCCTGCATACC | + |
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Preference number: 2 (lower is better) Translates to: THGFSCRGWPCQASMGGEQTIES*RKPLHT Trigger: GGTATGCAGGGGCTTTCTTCAACTTTCAATAGTTTG...CTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR GCA 90 bp | ACACATGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGAGGAGAGGTTGAAGAAAGCCCCTaGATACCATTTGAAATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: THGFSCRGWPCQASMGGEVEESP*IPFEIG Trigger: CCCAATTTCAAATGGTATGCAGGGGCTTTCTTCAAC...CTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGCATTATTTTAAAAGTGTCACAAGTCCTGTCAGATGTGGTGGAGGTACACCGCAGTTTAGGGGAATaGAGGGCAGGGAGGCGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: KCIILKVSQVLSDVVEVHRSLGE*RAGRRV Trigger: CACACGCCTCCCTGCCCTCCATTCCCCTAAACTGCG...GTGTACCTCCACCACATCTGACAGGACTTGTGACACTTTTAAAATAATGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAAAAGGGGACAGGACTGTaGGAGGCCTTGGACAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: NASMDIIERLCIKTEQEKKGTGL*EALDSL Trigger: CAAACTGTCCAAGGCCTCTCACAGTCCTGTCCCCTT...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CCA 90 bp | AGAATAACAACTTTTAATGGCTTTAATAGAGAAGGGGACAGGACTGTGAGAGGCCTTGTCAGGCATCAATaGGAGGAGAGGTCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: RITTFNGFNREGDRTVRGLVRHQ*EERSLV Trigger: GACCAAGGACCTCTCCTCCCATTGATGCCTGACAAG...GCCTCTCACAGTCCTGTCCCCTTCTCTATTAAAGCCATTAAAAGTTGTTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCAATCAGATCAAGTGGCAGCATCTCTAACAGGAAAACAAAAAGAAAGCGCAAAGGAGTACACATaGCTTCAGCTGCAGAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: CHQSDQVAASLTGKQKESAKEYT*LQLQRM Trigger: CATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGC...GCTTTCTTTTTGTTTTCCTGTTAGAGATGCTGCCACTTGATCTGATTGGTGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR GCA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAAACACATGGCTTCAGCTaGAGAGGATGGCCTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NASMDIIERLCIKTEQEKTHGFS*RGWPCQ Trigger: CTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGT...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCAATCAGATCAAGTGGCAGCATCTCTAACAGGAAAACAAAAAGAAAGCGACTGTGAGAGGCCTTaGACAGTTTGCTACATAGAT | + |
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Preference number: 2 (lower is better) Translates to: CHQSDQVAASLTGKQKESDCERP*TVCYID Trigger: ATCTATGTAGCAAACTGTCCAAGGCCTCTCACAGTC...GCTTTCTTTTTGTTTTCCTGTTAGAGATGCTGCCACTTGATCTGATTGGTGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGCAAGGCTTTGTTCATTTTAGGAGTTAGTGATCATATATCTACAAGAGGCCCCCTGCATACCATTTaGAATTGGGCCTACTATTGG | + |
|
Preference number: 2 (lower is better) Translates to: MSKALFILGVSDHISTRGPLHTI*NWAYYW Trigger: CCAATAGTAGGCCCAATTTCAAATGGTATGCAGGGG...GCCTCTTGTAGATATATGATCACTAACTCCTAAAATGAACAAAGCCTTGCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGCATTATTTTAAAAGTGTCACAAGTCCTGTCAGATGTGGTGGAGGTACACGACTGTGAGAGGCCTTaGACAGTTTGCTACATAGAT | + |
|
Preference number: 2 (lower is better) Translates to: KCIILKVSQVLSDVVEVHDCERP*TVCYID Trigger: ATCTATGTAGCAAACTGTCCAAGGCCTCTCACAGTC...GTGTACCTCCACCACATCTGACAGGACTTGTGACACTTTTAAAATAATGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR TCA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAACAAACTATTGAAAGTTaGAGAAAGCCCCTGCATACC | + |
|
Preference number: 2 (lower is better) Translates to: NASMDIIERLCIKTEQEKQTIES*RKPLHT Trigger: GGTATGCAGGGGCTTTCTTCAACTTTCAATAGTTTG...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR GCA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAAGTTGAAGAAAGCCCCTaGATACCATTTGAAATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NASMDIIERLCIKTEQEKVEESP*IPFEIG Trigger: CCCAATTTCAAATGGTATGCAGGGGCTTTCTTCAAC...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR GCA 90 bp | AGAATAACAACTTTTAATGGCTTTAATAGAGAAGGGGACAGGACTGTGAGAGGCACTCCACAGAACAAATaGATTATTGAGACCATGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RITTFNGFNREGDRTVRGTPQNK*IIETMH Trigger: ATGCATGGTCTCAATAATGCATTTGTTCTGTGGAGT...GCCTCTCACAGTCCTGTCCCCTTCTCTATTAAAGCCATTAAAAGTTGTTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR GCA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAAACTCCACAGAACAAATaGATTATTGAGACCATGCAT | + |
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Preference number: 2 (lower is better) Translates to: NASMDIIERLCIKTEQEKTPQNK*IIETMH Trigger: ATGCATGGTCTCAATAATGCATTTGTTCTGTGGAGT...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR GCA 90 bp | AAATGCATTATTTTAAAAGTGTCACAAGTCCTGTCAGATGTGGTGGAGGTACACATCATAGAGAGACTTTaGATCAAAACAGAACAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: KCIILKVSQVLSDVVEVHIIERL*IKTEQE Trigger: TTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGAT...GTGTACCTCCACCACATCTGACAGGACTTGTGACACTTTTAAAATAATGCATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR CCA 72 bp | CTCCCAGGGACTAAGACGTCAGCAAAGGAGTACACATaGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: LPGTKTSAKEYT*LQLQRMALSGI Trigger: GATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGCTGACGTCTTAGTCCCTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR CCA 72 bp | CAGCAAAGGAGTACACATGGCTTCAGCTGCAGAGGATaGCCTTGTCAGGCATCAATGGGAGGAGAGGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: QQRSTHGFSCRG*PCQASMGGEVL Trigger: AAGGACCTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR TCA 72 bp | GTCAGGCATCAATGGGAGGAGAGGTCCTTGGTCCTATaGAGGCTCAATAGATGCCGCAGTTTAGGGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: VRHQWEERSLVL*RLNRCRSLGEW Trigger: CCATTCCCCTAAACTGCGGCATCTATTGAGCCTTCATAGGACCAAGGACCTCTCCTCCCATTGATGCCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR GCA 72 bp | CTAAGACGTCAGCAAAGGAGTACACATGGCTTCAGCTaGAGAGGATGGCCTTGTCAGGCATCAATGGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: LRRQQRSTHGFS*RGWPCQASMGG Trigger: TCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTTTGCTGACGTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR GCA 72 bp | AGAAGGGGACAGGACTGTGAGAGGCCTTGGACAGTTTaGTACATAGATACCTTCAAGCAGGCATGGACTATT | + |
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Preference number: 3 (lower is better) Translates to: RRGQDCERPWTV*YIDTFKQAWTI Trigger: AATAGTCCATGCCTGCTTGAAGGTATCTATGTAGCAAACTGTCCAAGGCCTCTCACAGTCCTGTCCCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGTACACATGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGGAGAAATTCAAACTATaGAAAGTTGAAGAAAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: KEYTWLQLQRMALSGINGEKFKL*KVEESP Trigger: GGGGCTTTCTTCAACTTTCAATAGTTTGAATTTCTC...CCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| 3UTR-3UTR CAA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAAGAGGCCTTGGACAGTTaGCTACATAGATACCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: NASMDIIERLCIKTEQEKEALDS*LHRYLQ Trigger: TTGAAGGTATCTATGTAGCAAACTGTCCAAGGCCTC...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | AAGGAGTACACATGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGTCCCCAGGGCAGTGGTaGGGTACATGGACAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: KEYTWLQLQRMALSGINGSPGQW*GTWTGT Trigger: TGTTCCTGTCCATGTACCTCACCACTGCCCTGGGGA...CCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGTACTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | ACACATGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGAGGAGAGTGTGTGACAAAGAGATaGCTGTGGTCAGTAGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: THGFSCRGWPCQASMGGECVTKR*LWSVAK Trigger: CTTGGCTACTGACCACAGTCATCTCTTTGTCACACA...CTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | TGCCACCAATCAGATCAAGTGGCAGCATCTCTAACAGGAAAACAAAAAGAAAGCTCCCCAGGGCAGTGGTaGGGTACATGGACAGGAACA | + |
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Preference number: 4 (lower is better) Translates to: CHQSDQVAASLTGKQKESSPGQW*GTWTGT Trigger: TGTTCCTGTCCATGTACCTCACCACTGCCCTGGGGA...GCTTTCTTTTTGTTTTCCTGTTAGAGATGCTGCCACTTGATCTGATTGGTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | ACACATGGCTTCAGCTGCAGAGGATGGCCTTGTCAGGCATCAATGGGAGGAGAGTATTCGTGCATAGGATaGAAATATCAGCAGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: THGFSCRGWPCQASMGGEYSCIG*KYQQEW Trigger: CCATTCCTGCTGATATTTTCATCCTATGCACGAATA...CTCTCCTCCCATTGATGCCTGACAAGGCCATCCTCTGCAGCTGAAGCCATGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | TGCCACCAATCAGATCAAGTGGCAGCATCTCTAACAGGAAAACAAAAAGAAAGCCATGAGCAGTGTGTGTaGCAAAGAGATGACTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: CHQSDQVAASLTGKQKESHEQCV*QRDDCG Trigger: ACCACAGTCATCTCTTTGTCACACACACTGCTCATG...GCTTTCTTTTTGTTTTCCTGTTAGAGATGCTGCCACTTGATCTGATTGGTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | AGAATAACAACTTTTAATGGCTTTAATAGAGAAGGGGACAGGACTGTGAGAGGCCATGAGCAGTGTGTGTaGCAAAGAGATGACTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RITTFNGFNREGDRTVRGHEQCV*QRDDCG Trigger: ACCACAGTCATCTCTTTGTCACACACACTGCTCATG...GCCTCTCACAGTCCTGTCCCCTTCTCTATTAAAGCCATTAAAAGTTGTTATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | TGCCACCAATCAGATCAAGTGGCAGCATCTCTAACAGGAAAACAAAAAGAAAGCCAGGAGGAGGAATTCTaGAACAACAGTTTGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: CHQSDQVAASLTGKQKESQEEEF*NNSLIS Trigger: GGAAATCAAACTGTTGTTTCAGAATTCCTCCTCCTG...GCTTTCTTTTTGTTTTCCTGTTAGAGATGCTGCCACTTGATCTGATTGGTGGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR CCA 90 bp | AGAATAACAACTTTTAATGGCTTTAATAGAGAAGGGGACAGGACTGTGAGAGGCAACCTGCATAGGGTATaGATGGAACTTGGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RITTFNGFNREGDRTVRGNLHRV*MELGFA Trigger: TGCAAAGCCAAGTTCCATCCATACCCTATGCAGGTT...GCCTCTCACAGTCCTGTCCCCTTCTCTATTAAAGCCATTAAAAGTTGTTATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | AGAATAACAACTTTTAATGGCTTTAATAGAGAAGGGGACAGGACTGTGAGAGGCCAGGAGGAGGAATTCTaGAACAACAGTTTGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: RITTFNGFNREGDRTVRGQEEEF*NNSLIS Trigger: GGAAATCAAACTGTTGTTTCAGAATTCCTCCTCCTG...GCCTCTCACAGTCCTGTCCCCTTCTCTATTAAAGCCATTAAAAGTTGTTATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR CCA 90 bp | TTCAAACTATTGAAAGTTGAAGAAAGCCCCTGCATACCATTTGAAATTGGGCCTAACCTGCATAGGGTATaGATGGAACTTGGCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FKLLKVEESPCIPFEIGPNLHRV*MELGFA Trigger: TGCAAAGCCAAGTTCCATCCATACCCTATGCAGGTT...AGGCCCAATTTCAAATGGTATGCAGGGGCTTTCTTCAACTTTCAATAGTTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | AGAATAACAACTTTTAATGGCTTTAATAGAGAAGGGGACAGGACTGTGAGAGGCTATTCGTGCATAGGATaGAAATATCAGCAGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: RITTFNGFNREGDRTVRGYSCIG*KYQQEW Trigger: CCATTCCTGCTGATATTTTCATCCTATGCACGAATA...GCCTCTCACAGTCCTGTCCCCTTCTCTATTAAAGCCATTAAAAGTTGTTATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | TTCAAACTATTGAAAGTTGAAGAAAGCCCCTGCATACCATTTGAAATTGGGCCTGTTAGCCATCTGCTTTaGAAACACCTTTTTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: FKLLKVEESPCIPFEIGPVSHLL*KHLFKS Trigger: GCTTTTAAAAAGGTGTTTTCAAAGCAGATGGCTAAC...AGGCCCAATTTCAAATGGTATGCAGGGGCTTTCTTCAACTTTCAATAGTTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR TCA 90 bp | AAATGCATTATTTTAAAAGTGTCACAAGTCCTGTCAGATGTGGTGGAGGTACACGTTAGCCATCTGCTTTaGAAACACCTTTTTAAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KCIILKVSQVLSDVVEVHVSHLL*KHLFKS Trigger: GCTTTTAAAAAGGTGTTTTCAAAGCAGATGGCTAAC...GTGTACCTCCACCACATCTGACAGGACTTGTGACACTTTTAAAATAATGCATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR CAA 90 bp | TGCCACCAATCAGATCAAGTGGCAGCATCTCTAACAGGAAAACAAAAAGAAAGCCTAGAAGAGGGGACCTaGAGAATGGAGGACACTATT | + |
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Preference number: 5 (lower is better) Translates to: CHQSDQVAASLTGKQKESLEEGT*RMEDTI Trigger: AATAGTGTCCTCCATTCTCAAGGTCCCCTCTTCTAG...GCTTTCTTTTTGTTTTCCTGTTAGAGATGCTGCCACTTGATCTGATTGGTGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR CAA 90 bp | TTCAAACTATTGAAAGTTGAAGAAAGCCCCTGCATACCATTTGAAATTGGGCCTCTAGAAGAGGGGACCTaGAGAATGGAGGACACTATT | + |
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Preference number: 5 (lower is better) Translates to: FKLLKVEESPCIPFEIGPLEEGT*RMEDTI Trigger: AATAGTGTCCTCCATTCTCAAGGTCCCCTCTTCTAG...AGGCCCAATTTCAAATGGTATGCAGGGGCTTTCTTCAACTTTCAATAGTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR CAA 90 bp | AATGCCAGCATGGACATCATAGAGAGACTTTGCATCAAAACAGAACAGGAAAAACAGGAAAAAGTACATTaGTGCCAGGCAACCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: NASMDIIERLCIKTEQEKQEKVH*CQATCI Trigger: TATGCAGGTTGCCTGGCACAAATGTACTTTTTCCTG...TTTTTCCTGTTCTGTTTTGATGCAAAGTCTCTCTATGATGTCCATGCTGGCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS-3UTR CAA 90 bp | ATGAGCAAGGCTTTGTTCATTTTAGGAGTTAGTGATCATATATCTACAAGAGGCCAGGAAAAAGTACATTaGTGCCAGGCAACCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: MSKALFILGVSDHISTRGQEKVH*CQATCI Trigger: TATGCAGGTTGCCTGGCACAAATGTACTTTTTCCTG...GCCTCTTGTAGATATATGATCACTAACTCCTAAAATGAACAAAGCCTTGCTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213134.2 ENSMUST00000216291.2 |
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| CDS CAA 72 bp | GCTCTCGAGATCTGCAAAAAGCAGGAAAAAGTACATTaGTGCCAGGCAACCTGCATAGGGTATGGATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ALEICKKQEKVH*CQATCIGYGWN Trigger: GTTCCATCCATACCCTATGCAGGTTGCCTGGCACAAATGTACTTTTTCCTGCTTTTTGCAGATCTCGAGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000121280.3 ENSMUST00000213134.2 ENSMUST00000216291.2 |
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