Pregenerated sensors for OLFR393 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094488Ensembl transcript IDs: ENSMUST00000102523.2, ENSMUST00000213365.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTTaGAAACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: RWPSRPSLEREAHWT*KLYMPQYRGMPGPK Trigger: TTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR TCA 90 bp | CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATaGACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGT | + |
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Preference number: 1 (lower is better) Translates to: QGAKGICNPIGGTTI*TNQYPGALDSSCIC Trigger: ACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR TCA 90 bp | AGACTGTTTGAGAACATAAAGTGCTCAATGTATCTCTGTTTCTATTaGCCATCACACACAGGCTCAACTGGAGATGTTCCCCAGGCAACG | + |
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Preference number: 1 (lower is better) Translates to: RLFENIKCSMYLCFY*PSHTGSTGDVPQAT Trigger: CGTTGCCTGGGGAACATCTCCAGTTGAGCCTGTGTGTGATGGTCAATAGAAACAGAGATACATTGAGCACTTTATGTTCTCAAACAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR GCA 90 bp | ATGTGTGTTTTGCATCCATGTGAATTTATTACCACAAATATACAGTaGCCACAGCAGCCAGAAGCTAGAAGCCAGAATCCCCTGGAAGTG | + |
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Preference number: 1 (lower is better) Translates to: MCVLHPCEFITTNIQ*PQQPEARSQNPLEV Trigger: CACTTCCAGGGGATTCTGGCTTCTAGCTTCTGGCTGCTGTGGGCACTGTATATTTGTGGTAATAAATTCACATGGATGCAAAACACACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR GCA 90 bp | ACAGAAATAAGACAAAAGAGTGTAATAGGTCTAGGATCTCATACATaGTCACTCATTGCCCCTCCCTGTGAAATGGGAAGTCACTCACTA | + |
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Preference number: 1 (lower is better) Translates to: TEIRQKSVIGLGSHT*SLIAPPCEMGSHSL Trigger: TAGTGAGTGACTTCCCATTTCACAGGGAGGGGCAATGAGTGAGCATGTATGAGATCCTAGACCTATTACACTCTTTTGTCTTATTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR GCA 90 bp | TACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTaGTTCTTTCCTATGTCTTTTAGACCTGATGTCACTGATACTGAA | + |
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Preference number: 1 (lower is better) Translates to: YIFALWYCFLLPSSH*FFPMSFRPDVTDTE Trigger: TTCAGTATCAGTGACATCAGGTCTAAAAGACATAGGAAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR GCA 90 bp | TTTAAAGAGATGTGCATTCTAGGCTACATTTTTGCACTATGGTACTaGTTTCTATTACCCAGCAGTCATTGCTTCTTTCCTATGTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: FKEMCILGYIFALWY*FLLPSSHCFFPMSF Trigger: AAAAGACATAGGAAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGAATGCACATCTCTTTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR CCA 90 bp | TATATATTTAAAGAGATGTGCATTCTAGGCTACATTTTTGCACTATaGTACTGCTTTCTATTACCCAGCAGTCATTGCTTCTTTCCTATG | + |
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Preference number: 1 (lower is better) Translates to: YIFKEMCILGYIFAL*YCFLLPSSHCFFPM Trigger: CATAGGAAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGAATGCACATCTCTTTAAATATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR GCA 90 bp | ATACAGTGCCCACAGCAGCCAGAAGCTAGAAGCCAGAATCCCCTGGAAGTGGAGGGAAGTCACTCACTATaGCTCAGATTCTTCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: IQCPQQPEARSQNPLEVEGSHSL*LRFFRL Trigger: CAGCCTGAAGAATCTGAGGCATAGTGAGTGACTTCC...CTCCACTTCCAGGGGATTCTGGCTTCTAGCTTCTGGCTGCTGTGGGCACTGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCCATTGCCCCTCCCTGTaGAATGGGAAGTCACTCACT | + |
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Preference number: 2 (lower is better) Translates to: ILAILTGVRWNLRVVLICHCPSL*NGKSLT Trigger: AGTGAGTGACTTCCCATTTCACAGGGAGGGGCAATG...GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCATTCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGCCCCTCCCTGTGAAATaGGAAGTCACTCACTATGCC | + |
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Preference number: 2 (lower is better) Translates to: VHSRLHFCTMVLLSITQQPLPVK*EVTHYA Trigger: GGCATAGTGAGTGACTTCCCATTTCACAGGGAGGGG...CTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGAATGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCATTCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGCTAGGATCTCATACATaGTCACTCATTGCCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: VHSRLHFCTMVLLSITQQLGSHT*SLIAPP Trigger: GGGAGGGGCAATGAGTGAGCATGTATGAGATCCTAG...CTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGAATGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGGGCTTACCATGGAAATaGTGTGTGTGTTGGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: SRLHFCTMVLLSITQQSLGLPWK*CVCWDS Trigger: GCTGTCCCAACACACACATCATTTCCATGGTAAGCC...CAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CCA 90 bp | CTTATTCCCTACATCCTTCCCTTTTCTTTACACCACTTCCACTCTGACACAGTCGTGTGTGTGTGTGTGTaGTGTGAGTTCACAAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LIPYILPFSLHHFHSDTVVCVCV*CEFTKV Trigger: CACTTTTGTGAACTCACACCACACACACACACACAC...GACTGTGTCAGAGTGGAAGTGGTGTAAAGAAAAGGGAAGGATGTAGGGAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATCAAAACAATTCTGCCTaGTTTGTTCAGGGTCTAGAC | + |
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Preference number: 2 (lower is better) Translates to: FDLSHSDWCEVESQGCFDQNNSA*FVQGLD Trigger: GTCTAGACCCTGAACAAATCAGGCAGAATTGTTTTG...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGTGTGTGTGTGTGGTGTaGGTTCACAAAAGTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SRLHFCTMVLLSITQQSLCVCVV*VHKSAC Trigger: ACAAGCACTTTTGTGAACTCACACCACACACACACA...CAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGTATCTCTGTTTCTATTaGCCATCACACACAGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: SRLHFCTMVLLSITQQSLYLCFY*PSHTGS Trigger: TGAGCCTGTGTGTGATGGTCAATAGAAACAGAGATA...CAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | CTTATTCCCTACATCCTTCCCTTTTCTTTACACCACTTCCACTCTGACACAGTCTTATCTGCTGTCACCTaGATTTTTGATCTTAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: LIPYILPFSLHHFHSDTVLSAVT*IFDLSH Trigger: ATGGCTAAGATCAAAAATTCAGGTGACAGCAGATAA...GACTGTGTCAGAGTGGAAGTGGTGTAAAGAAAAGGGAAGGATGTAGGGAATAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CCA 90 bp | CTTATTCCCTACATCCTTCCCTTTTCTTTACACCACTTCCACTCTGACACAGTCTTCCAGGATTGTTTATaGAAGGTAAAGGTGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LIPYILPFSLHHFHSDTVFQDCL*KVKVKL Trigger: CAACTTCACCTTTACCTTCCATAAACAATCCTGGAA...GACTGTGTCAGAGTGGAAGTGGTGTAAAGAAAAGGGAAGGATGTAGGGAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTACCCAGCAGTCATTaGTTCTTTCCTATGTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: FDLSHSDWCEVESQGCFDLPSSH*FFPMSF Trigger: AAAAGACATAGGAAAGAAGCAATGACTGCTGGGTAA...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CCA 90 bp | TACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGCTTCTTTAGATTCTTCAGGCTGTaGAACAGAACCTTCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: YIFALWYCFLLPSSHCFFRFFRL*NRTFST Trigger: GGTAGAGAAGGTTCTGTTCCACAGCCTGAAGAATCT...AAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATCAGAGTATAAAAGCCTaGATTTATGTGTCATCACCT | + |
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Preference number: 2 (lower is better) Translates to: FDLSHSDWCEVESQGCFDQSIKA*IYVSSP Trigger: AGGTGATGACACATAAATCCAGGCTTTTATACTCTG...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR TCA 90 bp | TACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGCTTCTTTTCACAAAAGTGCTTGTaGAGATTATGGGGTAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: YIFALWYCFLLPSSHCFFSQKCL*RLWGRR Trigger: TCTCCTACCCCATAATCTTCACAAGCACTTTTGTGA...AAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR GCA 90 bp | TCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGTATACAAAACAATTCTaGCTGATTTGTTCAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRLHFCTMVLLSITQQSLYTKQF*LICSGS Trigger: AGACCCTGAACAAATCAGGCAGAATTGTTTTGTATA...CAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR GCA 90 bp | TACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGCTTCTTTTCCCACATTGACTACTaGACTAAACTTCTTCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: YIFALWYCFLLPSSHCFFSHIDY*TKLLLF Trigger: AAAAAGAAGAAGTTTAGTGCAGTAGTCAATGTGGGA...AAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR GCA 72 bp | ATTGCCCCTCCCTGTGAAATGGGAAGTCACTCACTATaGCTCAGATTCTTCAGGCTGTGGAACAGAACCTTC | + |
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Preference number: 3 (lower is better) Translates to: IAPPCEMGSHSL*LRFFRLWNRTF Trigger: GAAGGTTCTGTTCCACAGCCTGAAGAATCTGAGGCATAGTGAGTGACTTCCCATTTCACAGGGAGGGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR CCA 72 bp | CTCATACATGCTCACTCATTGCCCCTCCCTGTGAAATaGGAAGTCACTCACTATGCCTCAGATTCTTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LIHAHSLPLPVK*EVTHYASDSSG Trigger: GCCTGAAGAATCTGAGGCATAGTGAGTGACTTCCCATTTCACAGGGAGGGGCAATGAGTGAGCATGTATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR TCA 72 bp | AGGATCTCATACATGCTCACTCATTGCCCCTCCCTGTaGAATGGGAAGTCACTCACTATGCCTCAGATTCTT | + |
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Preference number: 3 (lower is better) Translates to: RISYMLTHCPSL*NGKSLTMPQIL Trigger: AAGAATCTGAGGCATAGTGAGTGACTTCCCATTTCACAGGGAGGGGCAATGAGTGAGCATGTATGAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATATACATGCTCACTCATaGCCCCTCCCTGTGAAATGG | + |
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Preference number: 3 (lower is better) Translates to: FDLSHSDWCEVESQGCFDIHAHS*PLPVKW Trigger: CCATTTCACAGGGAGGGGCAATGAGTGAGCATGTAT...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR CCA 72 bp | GGAAGTCACTCACTATGCCTCAGATTCTTCAGGCTGTaGAACAGAACCTTCTCTACCTCCTTAAGTGTATCA | + |
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Preference number: 3 (lower is better) Translates to: GSHSLCLRFFRL*NRTFSTSLSVS Trigger: TGATACACTTAAGGAGGTAGAGAAGGTTCTGTTCCACAGCCTGAAGAATCTGAGGCATAGTGAGTGACTTCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CAA 90 bp | CTTATTCCCTACATCCTTCCCTTTTCTTTACACCACTTCCACTCTGACACAGTCGTATCTCTGTTTCTATaGACCATCACACACAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LIPYILPFSLHHFHSDTVVSLFL*TITHRL Trigger: GAGCCTGTGTGTGATGGTCAATAGAAACAGAGATAC...GACTGTGTCAGAGTGGAAGTGGTGTAAAGAAAAGGGAAGGATGTAGGGAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR GCA 72 bp | GCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTaGTTCTTTCCTATGTCTTTTAGACCTGATGTCACT | + |
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Preference number: 3 (lower is better) Translates to: ALWYCFLLPSSH*FFPMSFRPDVT Trigger: AGTGACATCAGGTCTAAAAGACATAGGAAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR CCA 72 bp | GAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTaGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: EFLILAILTGVR*NLRVVLICISL Trigger: CAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR-3UTR CAA 90 bp | GTGCATTCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGGAAATGATGTGTGTGTaGGGACAGCAGAGTATAAAA | + |
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Preference number: 3 (lower is better) Translates to: VHSRLHFCTMVLLSITQQEMMCV*GQQSIK Trigger: TTTTATACTCTGCTGTCCCAACACACACATCATTTC...CTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGAATGCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCTGTGAAATGGGAAGTCACTCACTATGCCTCAGATTCTTCAGGCTGGCAGGGTGTGCATCATaGCATGTGATGTCGTCAGTA | + |
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Preference number: 4 (lower is better) Translates to: APPCEMGSHSLCLRFFRLAGCAS*HVMSSV Trigger: TACTGACGACATCACATGCCATGATGCACACCCTGC...CAGCCTGAAGAATCTGAGGCATAGTGAGTGACTTCCCATTTCACAGGGAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCCTGTGAAATGGGAAGTCACTCACTATGCCTCAGATTCTTCAGGCTGCCCAGGAGGAGAAACTaGGTGATGACAGTTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: APPCEMGSHSLCLRFFRLPRRRN*VMTVLL Trigger: CAACAAAACTGTCATCACCCAGTTTCTCCTCCTGGG...CAGCCTGAAGAATCTGAGGCATAGTGAGTGACTTCCCATTTCACAGGGAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR CCA 90 bp | ATACAGTGCCCACAGCAGCCAGAAGCTAGAAGCCAGAATCCCCTGGAAGTGGAGATTGGTGTGTGGAGATaGGAGTCCAGTTTAATGAGG | + |
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Preference number: 4 (lower is better) Translates to: IQCPQQPEARSQNPLEVEIGVWR*ESSLMR Trigger: CCTCATTAAACTGGACTCCCATCTCCACACACCAAT...CTCCACTTCCAGGGGATTCTGGCTTCTAGCTTCTGGCTGCTGTGGGCACTGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR CAA 72 bp | ATGTTCCCCAGGCAACGAGAAGCCCTAGAGGCAAGATaGGCTTACCATGGAAATGATGTGTGTGTTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: MFPRQREALEAR*AYHGNDVCVGT Trigger: TGTCCCAACACACACATCATTTCCATGGTAAGCCAATCTTGCCTCTAGGGCTTCTCGTTGCCTGGGGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR TCA 90 bp | ATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCAGAGCTTGGGGCTCATaGTGCTGGTGTAATGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ILAILTGVRWNLRVVLICRAWGS*CWCNAE Trigger: CTCTGCATTACACCAGCATCATGAGCCCCAAGCTCT...GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR CCA 90 bp | TCTAGGCTACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGACCCTCCATAGGGGATaGATGGGTCCTGGCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SRLHFCTMVLLSITQQSLTLHRG*MGPGSA Trigger: TGCAGAGCCAGGACCCATCCATCCCCTATGGAGGGT...CAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTAGCCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR TCA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTCCCAGGACAGTGGTaGGGTACATGGCCAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: FDLSHSDWCEVESQGCFDFPGQW*GTWPET Trigger: TGTTTCTGGCCATGTACCTCACCACTGTCCTGGGAA...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR GCA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATAAGGAAGTATATTTGTaGCAGGCACCCTCCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: FDLSHSDWCEVESQGCFDKEVYL*QAPSIG Trigger: CCCTATGGAGGGTGCCTGGCACAAATATACTTCCTT...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR CCA 90 bp | TACATTTTTGCACTATGGTACTGCTTTCTATTACCCAGCAGTCATTGCTTCTTTTGTACTCTAGGGAAATaGGCAGTCCCAGGAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: YIFALWYCFLLPSSHCFFCTLGK*AVPGGE Trigger: TTCTCCTCCTGGGACTGCCCATTTCCCTAGAGTACA...AAAGAAGCAATGACTGCTGGGTAATAGAAAGCAGTACCATAGTGCAAAAATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR TCA 90 bp | ATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCACCTTGTATATGCCTTaGGTAGATGGAACTTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: ILAILTGVRWNLRVVLICTLYMP*VDGTLR Trigger: TCTTAAAGTTCCATCTACTCAAGGCATATACAAGGT...GCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR TCA 90 bp | TTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTTTCTTACTACAGATaGCTCTTATTAGGGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: FDLSHSDWCEVESQGCFDFSYYR*LLLGPS Trigger: AGAAGGCCCTAATAAGAGTCATCTGTAGTAAGAAAA...ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| 3UTR CAA 72 bp | ATTAGACAGTACTTCACCCACTATGCATTTCCAGGATaGTTTATGGAAGGTAAAGGTGAAGTTGTAGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: IRQYFTHYAFPG*FMEGKGEVVAR Trigger: TCTAGCTACAACTTCACCTTTACCTTCCATAAACAATCCTGGAAATGCATAGTGGGTGAAGTACTGTCTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR GCA 90 bp | TACTATTATACAAAACAATTCTGCCTGATTTGTTCAGGGTCTAGACTAGTGACAAAAAGACAATCTTGCTaGAAGCAGGGTGTGCATCAT | + |
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Preference number: 4 (lower is better) Translates to: YYYTKQFCLICSGSRLVTKRQSC*KQGVHH Trigger: ATGATGCACACCCTGCTTGCAGCAAGATTGTCTTTT...TGTCACTAGTCTAGACCCTGAACAAATCAGGCAGAATTGTTTTGTATAATAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS-3UTR CAA 90 bp | ATACAGTGCCCACAGCAGCCAGAAGCTAGAAGCCAGAATCCCCTGGAAGTGGAGAGACAAGTACAGAGCTaGGGGCTCATGATGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: IQCPQQPEARSQNPLEVERQVQS*GLMMLV Trigger: CACCAGCATCATGAGCCCCAAGCTCTGTACTTGTCT...CTCCACTTCCAGGGGATTCTGGCTTCTAGCTTCTGGCTGCTGTGGGCACTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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| CDS GCA 90 bp | ATCACATTGTTCTCACAAAAAGACAATCTTGCTGCAAGCAGGGTGTaGATCATGGCATGTGATGTCGTCAGTATCCACAGTAGCAGCATT | + |
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Preference number: 5 (lower is better) Translates to: ITLFSQKDNLAASRV*IMACDVVSIHSSSI Trigger: AATGCTGCTACTGTGGATACTGACGACATCACATGCCATGATGCACACCCTGCTTGCAGCAAGATTGTCTTTTTGTGAGAACAATGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102523.2 ENSMUST00000213365.2 |
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| CDS-3UTR CAA 90 bp | CTTATTCCCTACATCCTTCCCTTTTCTTTACACCACTTCCACTCTGACACAGTCTACCTTGTATATGCCTaGAGTAGATGGAACTTTAAG | + |
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Preference number: 5 (lower is better) Translates to: LIPYILPFSLHHFHSDTVYLVYA*SRWNFK Trigger: CTTAAAGTTCCATCTACTCAAGGCATATACAAGGTA...GACTGTGTCAGAGTGGAAGTGGTGTAAAGAAAAGGGAAGGATGTAGGGAATAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213365.2 |
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