Pregenerated sensors for OLFR390 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069818Ensembl transcript IDs: ENSMUST00000120081.3, ENSMUST00000215161.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGTAGCTGTCTTCTGGGCAGATGAGAATAACAGCAGGGAACTCTaGAGGAAGCTCAAGGATGCCCATGGATACATGGGGCCTACCAGA | + |
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Preference number: 1 (lower is better) Translates to: PVAVFWADENNSREL*RKLKDAHGYMGPTR Trigger: TCTGGTAGGCCCCATGTATCCATGGGCATCCTTGAGCTTCCTCCAGAGTTCCCTGCTGTTATTCTCATCTGCCCAGAAGACAGCTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTCCTGTAGCTGTCTTCTaGGCAGATGAGAATAACAGC | + |
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Preference number: 2 (lower is better) Translates to: PGKHIKSSSFPTELIDSSPVAVF*ADENNS Trigger: GCTGTTATTCTCATCTGCCCAGAAGACAGCTACAGG...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CCA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATAACAGCAGGGAACTCTaGAGGAAGCTCAAGGATGCC | + |
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Preference number: 2 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYNSREL*RKLKDA Trigger: GGCATCCTTGAGCTTCCTCCAGAGTTCCCTGCTGTT...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTCTGAAGGTGATACAATaGAACTTATGCCAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PGKHIKSSSFPTELIDSSLKVIQ*NLCQRR Trigger: CCTTCTCTGGCATAAGTTTCATTGTATCACCTTCAG...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTTCCTTGCCTCCTTACTaGAGAAAATTTATAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: PGKHIKSSSFPTELIDSSSLPPY*RKFIAC Trigger: ACAGGCTATAAATTTTCTTCAGTAAGGAGGCAAGGA...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTAGAATGAAATTGACATaGAGGCATAATGGGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: PGKHIKSSSFPTELIDSSRMKLT*RHNGIS Trigger: AGAGATCCCATTATGCCTTCATGTCAATTTCATTCT...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATTTGCCTCTAGCTCCTTaGCTCCTTACTGAAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYLPLAP*LLTEEN Trigger: ATTTTCTTCAGTAAGGAGGCAAGGAGCTAGAGGCAA...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTTATACAGTAGTGAAATaGGGTAGGTCTGGTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: PGKHIKSSSFPTELIDSSYTVVK*GRSGFY Trigger: ATAAAAACCAGACCTACCCCATTTCACTACTGTATA...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCACAGGCCTTGGCTATAATATTAAGGCTAATATTCATAAGGCTTCTTATCTGAAGGTGATACAATaGAACTTATGCCAGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSTGLGYNIKANIHKASYLKVIQ*NLCQRR Trigger: CCTTCTCTGGCATAAGTTTCATTGTATCACCTTCAG...ATAAGAAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CCA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATCTTTTTGCTACTTTATaGGCTTTTAGTTCTACCACC | + |
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Preference number: 2 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYLFATL*AFSSTT Trigger: GGTGGTAGAACTAAAAGCCCATAAAGTAGCAAAAAG...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGCACAGGCCTTGGCTATAATATTAAGGCTAATATTCATAAGGCTTCTTATAGAATGAAATTGACATaGAGGCATAATGGGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSTGLGYNIKANIHKASYRMKLT*RHNGIS Trigger: AGAGATCCCATTATGCCTTCATGTCAATTTCATTCT...ATAAGAAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CCA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATTATACAGTAGTGAAATaGGGTAGGTCTGGTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYYTVVK*GRSGFY Trigger: ATAAAAACCAGACCTACCCCATTTCACTACTGTATA...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCACAGGCCTTGGCTATAATATTAAGGCTAATATTCATAAGGCTTCTTATAAATGTATTGAGTTGTaGATCCATAGTGTGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: SSTGLGYNIKANIHKASYKCIEL*IHSVHC Trigger: GCAATGCACACTATGGATCCACAACTCAATACATTT...ATAAGAAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CAA 90 bp | CTAATAATCTCTATAACAACTGTAGCCTCTTTTCCAGCACAGGCCTaGGCTATAATATTAAGGCTAATATTCATAAGGCTTCTTATCACT | + |
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Preference number: 2 (lower is better) Translates to: LIISITTVASFPAQA*AIILRLIFIRLLIT Trigger: AGTGATAAGAAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGAAAAGAGGCTACAGTTGTTATAGAGATTATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CCA 72 bp | CCAGAGCAGCAGCAGCAGCCAGAGCACCAGCAGCTGTaGCTGTATCTCCTCTTGGGGCTCTCACATTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: PEQQQQPEHQQL*LYLLLGLSHFY Trigger: ATAAAAATGTGAGAGCCCCAAGAGGAGATACAGCCACAGCTGCTGGTGCTCTGGCTGCTGCTGCTGCTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CCA 72 bp | CAGCAGGGAACTCTGGAGGAAGCTCAAGGATGCCCATaGATACATGGGGCCTACCAGAAGCTATACAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: QQGTLEEAQGCP*IHGAYQKLYSS Trigger: ACTACTGTATAGCTTCTGGTAGGCCCCATGTATCCATGGGCATCCTTGAGCTTCCTCCAGAGTTCCCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CCA 72 bp | GTCTTCTGGGCAGATGAGAATAACAGCAGGGAACTCTaGAGGAAGCTCAAGGATGCCCATGGATACATGGGG | + |
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Preference number: 3 (lower is better) Translates to: VFWADENNSREL*RKLKDAHGYMG Trigger: CCCCATGTATCCATGGGCATCCTTGAGCTTCCTCCAGAGTTCCCTGCTGTTATTCTCATCTGCCCAGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CCA 72 bp | AGCCAGAGCACCAGCAGCTGTGGCTGTATCTCCTCTTaGGGCTCTCACATTTTTATACTCCACAAAAGGCCT | + |
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Preference number: 3 (lower is better) Translates to: SQSTSSCGCISS*GSHIFILHKRP Trigger: AGGCCTTTTGTGGAGTATAAAAATGTGAGAGCCCCAAGAGGAGATACAGCCACAGCTGCTGGTGCTCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTCAGTTGCCAGACTTTTaGCTACTTTATGGGCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PGKHIKSSSFPTELIDSSQLPDF*LLYGLL Trigger: TAAAAGCCCATAAAGTAGCAAAAAGTCTGGCAACTG...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CAA 90 bp | AATGAATCAAACATAAATGGAAGCCTAATCCATGCCATTCTGATGCTAGGGGTTTGGCTGTATCTCCTCTaGGGGCTCTCACATTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: NESNINGSLIHAILMLGVWLYLL*GLSHFY Trigger: ATAAAAATGTGAGAGCCCCAAGAGGAGATACAGCCA...AACCCCTAGCATCAGAATGGCATGGATTAGGCTTCCATTTATGTTTGATTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCACAGGCCTTGGCTATAATATTAAGGCTAATATTCATAAGGCTTCTTATTGGCTGTATCTCCTCTaGGGGCTCTCACATTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: SSTGLGYNIKANIHKASYWLYLL*GLSHFY Trigger: ATAAAAATGTGAGAGCCCCAAGAGGAGATACAGCCA...ATAAGAAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR TCA 72 bp | ACAGACTTATTTGCCTCTAGCTCCTTGCCTCCTTACTaGAGAAAATTTATAGCCTGTAGGCGTAAGATAATT | + |
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Preference number: 3 (lower is better) Translates to: TDLFASSSLPPY*RKFIACRRKII Trigger: AATTATCTTACGCCTACAGGCTATAAATTTTCTTCAGTAAGGAGGCAAGGAGCTAGAGGCAAATAAGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCACAGGCCTTGGCTATAATATTAAGGCTAATATTCATAAGGCTTCTTATCAGTTGCCAGACTTTTaGCTACTTTATGGGCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: SSTGLGYNIKANIHKASYQLPDF*LLYGLL Trigger: TAAAAGCCCATAAAGTAGCAAAAAGTCTGGCAACTG...ATAAGAAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR-3UTR CAA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATTTGTTATGCAAGAAGTaGTTAAGTTCCCATTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYLLCKK*LSSHFQ Trigger: CTGGAAATGGGAACTTAACAACTTCTTGCATAACAA...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTCGTACTCAGGGGCAATaGGCAGGCCCAGGAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: PGKHIKSSSFPTELIDSSRTQGQ*AGPGVR Trigger: TCTTACTCCTGGGCCTGCCCATTGCCCCTGAGTACG...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR CCA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATCGTACTCAGGGGCAATaGGCAGGCCCAGGAGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYRTQGQ*AGPGVR Trigger: TCTTACTCCTGGGCCTGCCCATTGCCCCTGAGTACG...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTCCCAGGAGTAAGAACTaGGAGATGATAGTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: PGKHIKSSSFPTELIDSSPRSKN*EMIVWL Trigger: CAACCAGACTATCATCTCTCAGTTCTTACTCCTGGG...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR GCA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATAGAAGAGCTTGTGGATaGCTCGAGTTGAAGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYRRACG*LELKGP Trigger: AGGTCCCTTCAACTCGAGGCATCCACAAGCTCTTCT...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR TCA 90 bp | AATGAATCAAACATAAATGGAAGCCTAATCCATGCCATTCTGATGCTAGGGGTTCCCAGGAGTAAGAACTaGGAGATGATAGTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: NESNINGSLIHAILMLGVPRSKN*EMIVWL Trigger: CAACCAGACTATCATCTCTCAGTTCTTACTCCTGGG...AACCCCTAGCATCAGAATGGCATGGATTAGGCTTCCATTTATGTTTGATTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR GCA 90 bp | CCTGGGAAGCACATAAAGAGTTCAAGTTTCCCCACTGAGTTAATTGACAGCTCTGTTAAAAGCAAAGTGTaGAACATGGCATACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: PGKHIKSSSFPTELIDSSVKSKV*NMAYNV Trigger: CACATTGTATGCCATGTTGCACACTTTGCTTTTAAC...AGAGCTGTCAATTAACTCAGTGGGGAAACTTGAACTCTTTATGTGCTTCCCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR GCA 90 bp | AATGAATCAAACATAAATGGAAGCCTAATCCATGCCATTCTGATGCTAGGGGTTGTTAAAAGCAAAGTGTaGAACATGGCATACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: NESNINGSLIHAILMLGVVKSKV*NMAYNV Trigger: CACATTGTATGCCATGTTGCACACTTTGCTTTTAAC...AACCCCTAGCATCAGAATGGCATGGATTAGGCTTCCATTTATGTTTGATTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CAA 72 bp | TCTATAACAACTGTAGCCTCTTTTCCAGCACAGGCCTaGGCTATAATATTAAGGCTAATATTCATAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SITTVASFPAQA*AIILRLIFIRL Trigger: AAGCCTTATGAATATTAGCCTTAATATTATAGCCAAGGCCTGTGCTGGAAAAGAGGCTACAGTTGTTATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| 3UTR CAA 72 bp | AGTCTTGCCTCTTACATGGGTTTAAATCTTTACACTTaGTTATGCAAGAAGTTGTTAAGTTCCCATTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLASYMGLNLYT*LCKKLLSSHFQ Trigger: CTGGAAATGGGAACTTAACAACTTCTTGCATAACAAAGTGTAAAGATTTAAACCCATGTAAGAGGCAAGACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR CAA 90 bp | TTGCCAGACTTTTTGCTACTTTATGGGCTTTTAGTTCTACCACCTTTCTCTGTCAGACTCACACAGAGCTaGGGGCTCATGATACTGGCA | + |
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Preference number: 5 (lower is better) Translates to: LPDFLLLYGLLVLPPFSVRLTQS*GLMILA Trigger: TGCCAGTATCATGAGCCCCAAGCTCTGTGTGAGTCT...GACAGAGAAAGGTGGTAGAACTAAAAGCCCATAAAGTAGCAAAAAGTCTGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR CAA 90 bp | TTGCCAGACTTTTTGCTACTTTATGGGCTTTTAGTTCTACCACCTTTCTCTGTCCGAGTTGAAGGGACCTaGAGGATGGAGGAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LPDFLLLYGLLVLPPFSVRVEGT*RMEEMM Trigger: CATCATCTCCTCCATCCTCAAGGTCCCTTCAACTCG...GACAGAGAAAGGTGGTAGAACTAAAAGCCCATAAAGTAGCAAAAAGTCTGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR CAA 90 bp | CAACAAACATGGTCTAGTCCTTCAAAGCAACACTCTCTGATACAACTTGCATATAGACTCACACAGAGCTaGGGGCTCATGATACTGGCA | + |
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Preference number: 5 (lower is better) Translates to: QQTWSSPSKQHSLIQLAYRLTQS*GLMILA Trigger: TGCCAGTATCATGAGCCCCAAGCTCTGTGTGAGTCT...ATATGCAAGTTGTATCAGAGAGTGTTGCTTTGAAGGACTAGACCATGTTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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| CDS-3UTR CAA 90 bp | AATGAATCAAACATAAATGGAAGCCTAATCCATGCCATTCTGATGCTAGGGGTTCGAGTTGAAGGGACCTaGAGGATGGAGGAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: NESNINGSLIHAILMLGVRVEGT*RMEEMM Trigger: CATCATCTCCTCCATCCTCAAGGTCCCTTCAACTCG...AACCCCTAGCATCAGAATGGCATGGATTAGGCTTCCATTTATGTTTGATTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120081.3 ENSMUST00000215161.2 |
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