Pregenerated sensors for OLFR389 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070383Ensembl transcript IDs: ENSMUST00000122224.4, ENSMUST00000124927.3, ENSMUST00000215418.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGAGGACTAGCATGGAGATaGTGTGGCAGGGGGCTAATG | + |
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Preference number: 2 (lower is better) Translates to: MTIFQSLAMETAGMCVHRGLAWR*CGRGLM Trigger: CATTAGCCCCCTGCCACATCATCTCCATGCTAGTCC...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAACAGCAGGTATGTGTGTACATAGAAGTGATCACATGATCACTGGTTGGGAGATAAGAAGTCATTaGACCTCATATCCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: METAGMCVHRSDHMITGWEIRSH*TSYPSV Trigger: GACTGAAGGATATGAGGTTCAATGACTTCTTATCTC...CCAACCAGTGATCATGTGATCACTTCTATGTACACACATACCTGCTGTTTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAAACAGCAGGTATGTGTGTACATAGAAGTGATCACATGATCACTGGTTGGCATTCTCCCTATATGTaGGATAAGAAGTCATTGAAC | + |
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Preference number: 2 (lower is better) Translates to: METAGMCVHRSDHMITGWHSPYM*DKKSLN Trigger: GTTCAATGACTTCTTATCTCACATATAGGGAGAATG...CCAACCAGTGATCATGTGATCACTTCTATGTACACACATACCTGCTGTTTCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGAAACAGCAGGTATGTGTGTACATAGAAGTGATCACATGATCACTGGTTGGTGTTCAGGATTTTTATaGAAGGTAAGGAGGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: METAGMCVHRSDHMITGWCSGFL*KVRRKL Trigger: CAACTTCCTCCTTACCTTGCATAAAAATCCTGAACA...CCAACCAGTGATCATGTGATCACTTCTATGTACACACATACCTGCTGTTTCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTAAGTAGAAGCAGTCTATaGTCTCATACACATTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVSRSSL*SHTHSP Trigger: GGGAGAATGTGTATGAGACCATAGACTGCTTCTACT...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR CAA 90 bp | CCTTTCTTCTTTGACTACTATACCAAACCTGTACCCTTTAATGTATaGAACAATTATGTAGCATGTTCCATCCTTGTAGGTCCTATGATG | + |
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Preference number: 2 (lower is better) Translates to: PFFFDYYTKPVPFNV*NNYVACSILVGPMM Trigger: CATCATAGGACCTACAAGGATGGAACATGCTACATAATTGTTCAATACATTAAAGGGTACAGGTTTGGTATAGTAGTCAAAGAAGAAAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTAGAGATAAGAAGTCATTaGACCTCATATCCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVEIRSH*TSYPSV Trigger: GACTGAAGGATATGAGGTTCAATGACTTCTTATCTC...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR TCA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTACATTCTCCCTATATGTaGGATAAGAAGTCATTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVHSPYM*DKKSLN Trigger: GTTCAATGACTTCTTATCTCACATATAGGGAGAATG...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGAGGGGCTAATGATGAGTaGAGTAAAAACAATTGTATT | + |
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Preference number: 2 (lower is better) Translates to: MTIFQSLAMETAGMCVHRGANDE*SKNNCI Trigger: AATACAATTGTTTTTACTCCACTCATCATTAGCCCC...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR TCA 72 bp | TACACAGATGCTCAAGTGAGTATGTTTCTCAGGCAGTaGGACGCCCTTAGAGGCAGGACTAGCATGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: YTDAQVSMFLRQ*DALRGRTSMEM Trigger: CATCTCCATGCTAGTCCTGCCTCTAAGGGCGTCTCACTGCCTGAGAAACATACTCACTTGAGCATCTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGAAACAGCAGGTATGTGTGTACATAGAAGTGATCACATGATCACTGGTTGGGACAACCTTTCTTCTTaGACTACTATACCAAACCTG | + |
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Preference number: 3 (lower is better) Translates to: METAGMCVHRSDHMITGWDNLSS*TTIPNL Trigger: CAGGTTTGGTATAGTAGTCAAAGAAGAAAGGTTGTC...CCAACCAGTGATCATGTGATCACTTCTATGTACACACATACCTGCTGTTTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR TCA 72 bp | AGCAGTCTATGGTCTCATACACATTCTCCCTATATGTaGGATAAGAAGTCATTGAACCTCATATCCTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: SSLWSHTHSPYM*DKKSLNLISFS Trigger: ACTGAAGGATATGAGGTTCAATGACTTCTTATCTCACATATAGGGAGAATGTGTATGAGACCATAGACTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR TCA 72 bp | ATACACATTCTCCCTATATGTGAGATAAGAAGTCATTaGACCTCATATCCTTCAGTCTACAAAACAGCACCT | + |
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Preference number: 3 (lower is better) Translates to: IHILPICEIRSH*TSYPSVYKTAP Trigger: AGGTGCTGTTTTGTAGACTGAAGGATATGAGGTTCAATGACTTCTTATCTCACATATAGGGAGAATGTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR-3UTR CAA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCAGACAACCTTTCTTCTTaGACTACTATACCAAACCTG | + |
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Preference number: 3 (lower is better) Translates to: EIILDSPSFTVNVQDFYADNLSS*TTIPNL Trigger: CAGGTTTGGTATAGTAGTCAAAGAAGAAAGGTTGTC...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | ATGGAAACAGCAGGTATGTGTGTACATAGAAGTGATCACATGATCACTGGTTGGATTGGTGTGTGGAGATaGGAATCCAGTCGAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: METAGMCVHRSDHMITGWIGVWR*ESSRTR Trigger: CCTTGTTCGACTGGATTCCCATCTCCACACACCAAT...CCAACCAGTGATCATGTGATCACTTCTATGTACACACATACCTGCTGTTTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCACAGGAAATGATACTCTaGCAAGATGGGCAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: EIILDSPSFTVNVQDFYAQEMIL*QDGQTQ Trigger: CTGGGTCTGCCCATCTTGTCAGAGTATCATTTCCTG...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGACAGGAAATGATACTCTaGCAAGATGGGCAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: MTIFQSLAMETAGMCVHRQEMIL*QDGQTQ Trigger: CTGGGTCTGCCCATCTTGTCAGAGTATCATTTCCTG...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | CCTGTACCCTTTAATGTATTGAACAATTATGTAGCATGTTCCATCCTTGTAGGTATTGGTGTGTGGAGATaGGAATCCAGTCGAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: PVPFNVLNNYVACSILVGIGVWR*ESSRTR Trigger: CCTTGTTCGACTGGATTCCCATCTCCACACACCAAT...ACCTACAAGGATGGAACATGCTACATAATTGTTCAATACATTAAAGGGTACAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCAATTGGTGTGTGGAGATaGGAATCCAGTCGAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIILDSPSFTVNVQDFYAIGVWR*ESSRTR Trigger: CCTTGTTCGACTGGATTCCCATCTCCACACACCAAT...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCAGTAGAAAAGACCTTGTaGATGCCCTGTGTAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: EIILDSPSFTVNVQDFYAVEKTL*MPCVDG Trigger: CCCATCTACACAGGGCATCCACAAGGTCTTTTCTAC...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGAGTAGAAAAGACCTTGTaGATGCCCTGTGTAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: MTIFQSLAMETAGMCVHRVEKTL*MPCVDG Trigger: CCCATCTACACAGGGCATCCACAAGGTCTTTTCTAC...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCACAGAAGGAGGAACTTTaGTATCAAAGTTTGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: EIILDSPSFTVNVQDFYAQKEEL*YQSLVV Trigger: AACAACCAAACTTTGATATCAAAGTTCCTCCTTCTG...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGACAGAAGGAGGAACTTTaGTATCAAAGTTTGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: MTIFQSLAMETAGMCVHRQKEEL*YQSLVV Trigger: AACAACCAAACTTTGATATCAAAGTTCCTCCTTCTG...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTACAGAAGGAGGAACTTTaGTATCAAAGTTTGGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVQKEEL*YQSLVV Trigger: AACAACCAAACTTTGATATCAAAGTTCCTCCTTCTG...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCAATTAACAAAAGTGTCTaGGCAAGACAACTTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: EIILDSPSFTVNVQDFYAINKSV*ARQLQK Trigger: CTTCTGAAGTTGTCTTGCTCAGACACTTTTGTTAAT...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR TCA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTAATTAACAAAAGTGTCTaGGCAAGACAACTTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVINKSV*ARQLQK Trigger: CTTCTGAAGTTGTCTTGCTCAGACACTTTTGTTAAT...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGACACTCTCTTTTACAGTaGAATTATTACTTGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: MTIFQSLAMETAGMCVHRHSLLQ*NYYLMG Trigger: GCCCATCAAGTAATAATTCCACTGTAAAAGAGAGTG...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CCA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTACACTCTCTTTTACAGTaGAATTATTACTTGATGGGC | + |
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Preference number: 4 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVHSLLQ*NYYLMG Trigger: GCCCATCAAGTAATAATTCCACTGTAAAAGAGAGTG...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| 3UTR CAA 72 bp | TTTGACTACTATACCAAACCTGTACCCTTTAATGTATaGAACAATTATGTAGCATGTTCCATCCTTGTAGGT | + |
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Preference number: 4 (lower is better) Translates to: FDYYTKPVPFNV*NNYVACSILVG Trigger: ACCTACAAGGATGGAACATGCTACATAATTGTTCAATACATTAAAGGGTACAGGTTTGGTATAGTAGTCAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS GCA 90 bp | ATCACATTCTTCTCACAAAAAGACAATCTAGCCATGAGCAAGGTGTaGATCAAGGCATTAGATGTTGTCAGCATCCACAGTAGTAGCACT | + |
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Preference number: 5 (lower is better) Translates to: ITFFSQKDNLAMSKV*IKALDVVSIHSSST Trigger: AGTGCTACTACTGTGGATGCTGACAACATCTAATGCCTTGATGCACACCTTGCTCATGGCTAGATTGTCTTTTTGTGAGAAGAATGTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | GAGATCATATTAGACAGTCCCTCATTCACTGTAAATGTTCAGGATTTTTATGCAAGTGAAGTACAGAACTaGGTACTCATGATGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: EIILDSPSFTVNVQDFYASEVQN*VLMMLV Trigger: CACCAGCATCATGAGTACCAAGTTCTGTACTTCACT...TGCATAAAAATCCTGAACATTTACAGTGAATGAGGGACTGTCTAATATGATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTAAGTGAAGTACAGAACTaGGTACTCATGATGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVSEVQN*VLMMLV Trigger: CACCAGCATCATGAGTACCAAGTTCTGTACTTCACT...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGAAGTGAAGTACAGAACTaGGTACTCATGATGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: MTIFQSLAMETAGMCVHRSEVQN*VLMMLV Trigger: CACCAGCATCATGAGTACCAAGTTCTGTACTTCACT...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGATGTGTAGATGGGACCTaGAGAATGGAGAAGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: MTIFQSLAMETAGMCVHRCVDGT*RMEKKI Trigger: GATTTTCTTCTCCATTCTCAAGGTCCCATCTACACA...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTATGTGTAGATGGGACCTaGAGAATGGAGAAGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVCVDGT*RMEKKI Trigger: GATTTTCTTCTCCATTCTCAAGGTCCCATCTACACA...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | CCTGTACCCTTTAATGTATTGAACAATTATGTAGCATGTTCCATCCTTGTAGGTCAGTGGAATTATTACTaGATGGGCATAAGTATAGAC | + |
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Preference number: 5 (lower is better) Translates to: PVPFNVLNNYVACSILVGQWNYY*MGISID Trigger: GTCTATACTTATGCCCATCAAGTAATAATTCCACTG...ACCTACAAGGATGGAACATGCTACATAATTGTTCAATACATTAAAGGGTACAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | ATGACAATATTTCAGAGTTTAGCTATGGAAACAGCAGGTATGTGTGTACATAGACAGTGGAATTATTACTaGATGGGCATAAGTATAGAC | + |
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Preference number: 5 (lower is better) Translates to: MTIFQSLAMETAGMCVHRQWNYY*MGISID Trigger: GTCTATACTTATGCCCATCAAGTAATAATTCCACTG...TCTATGTACACACATACCTGCTGTTTCCATAGCTAAACTCTGAAATATTGTCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS-3UTR CAA 90 bp | CACCTATCAAAGACAATTAAGGAAATAAAAAGACCAAGGTTACTCCATGCTGTACAGTGGAATTATTACTaGATGGGCATAAGTATAGAC | + |
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Preference number: 5 (lower is better) Translates to: HLSKTIKEIKRPRLLHAVQWNYY*MGISID Trigger: GTCTATACTTATGCCCATCAAGTAATAATTCCACTG...TACAGCATGGAGTAACCTTGGTCTTTTTATTTCCTTAATTGTCTTTGATAGGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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| CDS GCA 72 bp | TTCTCACAAAAAGACAATCTAGCCATGAGCAAGGTGTaGATCAAGGCATTAGATGTTGTCAGCATCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: FSQKDNLAMSKV*IKALDVVSIHS Trigger: ACTGTGGATGCTGACAACATCTAATGCCTTGATGCACACCTTGCTCATGGCTAGATTGTCTTTTTGTGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000122224.4 ENSMUST00000124927.3 ENSMUST00000215418.2 |
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